CSPI01G32710 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G32710
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Xyloglucan endotransglucosylase/hydrolase
Location	Chr1 : 27557149 .. 27557463 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGGAGATATCCATCAAGTGGGATGCATGTGTTGGGAAGCATTTGGAATGGAGAAGCATGGGCATCAGATGGGAAGAAAGTGGATTGGTCTCAAGTACCTTTTCAAGCAGATTACAGAGGCTTTTCCATTCTTGGTTGCCCTTCTGGAAGCGATTGTGATTCTCAATCCTTTCTTTGGAACCAACCTAATACATGGCAACTCAATCCCACGCAGGAAAAATTCTATCAACTGATCAAGTCAAAATATTTATACTATACTTATTGTTCTAACCCCAACGCATCGCAGCTATATAAAGAGTGTCAGTTTGAA

mRNA sequence

ATGGGGGGGAGATATCCATCAAGTGGGATGCATGTGTTGGGAAGCATTTGGAATGGAGAAGCATGGGCATCAGATGGGAAGAAAGTGGATTGGTCTCAAGTACCTTTTCAAGCAGATTACAGAGGCTTTTCCATTCTTGGTTGCCCTTCTGGAAGCGATTGTGATTCTCAATCCTTTCTTTGGAACCAACCTAATACATGGCAACTCAATCCCACGCAGGAAAAATTCTATCAACTGATCAAGTCAAAATATTTATACTATACTTATTGTTCTAACCCCAACGCATCGCAGCTATATAAAGAGTGTCAGTTTGAA

Coding sequence (CDS)

ATGGGGGGGAGATATCCATCAAGTGGGATGCATGTGTTGGGAAGCATTTGGAATGGAGAAGCATGGGCATCAGATGGGAAGAAAGTGGATTGGTCTCAAGTACCTTTTCAAGCAGATTACAGAGGCTTTTCCATTCTTGGTTGCCCTTCTGGAAGCGATTGTGATTCTCAATCCTTTCTTTGGAACCAACCTAATACATGGCAACTCAATCCCACGCAGGAAAAATTCTATCAACTGATCAAGTCAAAATATTTATACTATACTTATTGTTCTAACCCCAACGCATCGCAGCTATATAAAGAGTGTCAGTTTGAA

Homology

[Close]

BLAST of CSPI01G32710 vs. Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=3 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 3.8e-16
Identity = 38/96 (39.58%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 2   GGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGCPSGSD---CDS 61
           G  YPS  M V+ S+WNGE WA+DG   K++WS  PF+A+++GF+  GC + ++   C S
Sbjct: 182 GMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACGS 241

Query: 62  QSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 93
            ++ WN  +  +L+ +++K Y  ++ KY+ Y YCS+
Sbjct: 242 SAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSD 277

[Close]

BLAST of CSPI01G32710 vs. Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 1


Query: 2   GGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGCP------SGSD 61
           G  YPS  M V  S+WNG+ WA+DG   KV+WS  PF A +R F++ GC       +   
Sbjct: 180 GVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGA 239

Query: 62  CDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQ 98
           C+S ++ WN  N  +L+  ++K Y+ ++SKY+ Y YC++ +  Q
Sbjct: 240 CESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQ 283

[Close]

BLAST of CSPI01G32710 vs. Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.3e-15
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 1


Query: 2   GGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGC------PSGSD 61
           G  YPS  M ++ S+WNGE WA+ G  +K++W+  PF+A Y+GFS  GC       + + 
Sbjct: 179 GVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANV 238

Query: 62  CDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 93
           C S  + WN     QL+  ++K  + +++KY+ Y YCS+
Sbjct: 239 CGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSD 277

[Close]

BLAST of CSPI01G32710 vs. Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-11
Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = 1


Query: 1   MGGRYP-SSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGCPSGSD---C 60
           +G ++P +  M +  S+WN + WA+ G  +K DWS+ PF A Y+GF I GC +  +   C
Sbjct: 177 LGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFC 236

Query: 61  DSQ-SFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN-PNASQLYKEC 103
           D+Q    W+QP    L+  Q +    +++KY  Y YC++    SQ+  EC
Sbjct: 237 DTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286

[Close]

BLAST of CSPI01G32710 vs. Swiss-Prot
Match: XTH1_SOYBN (Xyloglucan endotransglucosylase/hydrolase 1 OS=Glycine max GN=XTH1 PE=2 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 8.2e-11
Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 1


Query: 1   MGGRYP-SSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGCPSGSD---C 60
           +G ++P    M +  S+WN + WA+ G  +K DWS+ PF A Y+GF I GC +  +   C
Sbjct: 180 LGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFC 239

Query: 61  DSQ-SFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 93
           D+Q    W+QP    L+  Q +  + ++ KY  Y YC++
Sbjct: 240 DTQGKRWWDQPEFRDLDAAQWRRLRWVRQKYTIYNYCTD 278

[Close]

BLAST of CSPI01G32710 vs. TrEMBL
Match: N0DX90_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth30 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 7.3e-59
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL
Sbjct: 184 MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 243

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 106
           WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE
Sbjct: 244 WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 288

[Close]

BLAST of CSPI01G32710 vs. TrEMBL
Match: A0A0A0M0Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662760 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 7.3e-59
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL
Sbjct: 20  MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 79

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 106
           WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE
Sbjct: 80  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 124

[Close]

BLAST of CSPI01G32710 vs. TrEMBL
Match: N0DX41_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth26 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-31
Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           +GGRYPS GM V GSIWNGE WAS+G+KVDWSQ PFQA+Y+ F ILGC  G+ CDSQ+  
Sbjct: 178 IGGRYPSQGMLVQGSIWNGEGWASNGRKVDWSQAPFQANYKSFGILGCQIGNQCDSQTLP 237

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 103
           WN  + W+LNP Q+  Y+ +K KY+Y TYC +P     Y+EC
Sbjct: 238 WNNQDKWELNPKQQSDYENVKRKYVYDTYCLSPRGKN-YREC 278

[Close]

BLAST of CSPI01G32710 vs. TrEMBL
Match: A0A0A0KXI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308600 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.4e-31
Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           +GGRYPS GM V GSIWNGE WAS+G+KVDWSQ PFQA+Y+ F ILGC  G+ CDSQ+  
Sbjct: 172 IGGRYPSQGMLVQGSIWNGEGWASNGRKVDWSQAPFQANYKSFGILGCQIGNQCDSQTLP 231

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 103
           WN  + W+LNP Q+  Y+ +K KY+Y TYC +P     Y+EC
Sbjct: 232 WNNQDKWELNPKQQSDYENVKRKYVYDTYCLSPRGKN-YREC 272

[Close]

BLAST of CSPI01G32710 vs. TrEMBL
Match: V7B416_PHAVU (Xyloglucan endotransglucosylase/hydrolase OS=Phaseolus vulgaris GN=PHAVU_008G129100g PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.6e-21
Identity = 51/107 (47.66%), Postives = 66/107 (61.68%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSD----CDS 60
           +G  +P   MHV  SIWNGE WAS+GK++DW+Q PF A + GF+I  C + +     C S
Sbjct: 183 VGVSFPLQEMHVTASIWNGEPWASNGKRIDWNQAPFTAHFEGFNIHACQTQNHYKFLCYS 242

Query: 61  QSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQ 104
               WN    WQLNP Q+K YQ +  K+L Y YCS  +  QL+KECQ
Sbjct: 243 PYLWWNDHKHWQLNPHQQKAYQYVTKKHLVYDYCS--DRGQLHKECQ 287

[Close]

BLAST of CSPI01G32710 vs. TAIR10
Match: AT4G13080.1 (AT4G13080.1 xyloglucan endotransglucosylase/hydrolase 1)

HSP 1 Score: 85.5 bits (210), Expect = 2.1e-17
Identity = 38/96 (39.58%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 2   GGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGCPSGSD---CDS 61
           G  YPS  M V+ S+WNGE WA+DG   K++WS  PF+A+++GF+  GC + ++   C S
Sbjct: 182 GMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACGS 241

Query: 62  QSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 93
            ++ WN  +  +L+ +++K Y  ++ KY+ Y YCS+
Sbjct: 242 SAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSD 277

[Close]

BLAST of CSPI01G32710 vs. TAIR10
Match: AT3G25050.1 (AT3G25050.1 xyloglucan endotransglucosylase/hydrolase 3)

HSP 1 Score: 84.0 bits (206), Expect = 6.2e-17
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 1


Query: 2   GGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGCP------SGSD 61
           G  YPS  M V  S+WNG+ WA+DG   KV+WS  PF A +R F++ GC       +   
Sbjct: 180 GVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGA 239

Query: 62  CDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQ 98
           C+S ++ WN  N  +L+  ++K Y+ ++SKY+ Y YC++ +  Q
Sbjct: 240 CESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQ 283

[Close]

BLAST of CSPI01G32710 vs. TAIR10
Match: AT4G13090.1 (AT4G13090.1 xyloglucan endotransglucosylase/hydrolase 2)

HSP 1 Score: 80.9 bits (198), Expect = 5.2e-16
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 1


Query: 2   GGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGC------PSGSD 61
           G  YPS  M ++ S+WNGE WA+ G  +K++W+  PF+A Y+GFS  GC       + + 
Sbjct: 179 GVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANV 238

Query: 62  CDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 93
           C S  + WN     QL+  ++K  + +++KY+ Y YCS+
Sbjct: 239 CGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSD 277

[Close]

BLAST of CSPI01G32710 vs. TAIR10
Match: AT4G37800.1 (AT4G37800.1 xyloglucan endotransglucosylase/hydrolase 7)

HSP 1 Score: 63.9 bits (154), Expect = 6.6e-11
Identity = 29/88 (32.95%), Postives = 53/88 (60.23%), Query Frame = 1


Query: 10  MHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGC--PSGSDCDSQSFLWNQPN 69
           M V  ++W  + WA+ G  +K++WS+ PF A Y+ F I GC  P  +DC + S  W + +
Sbjct: 191 MGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGS 250

Query: 70  TW-QLNPTQEKFYQLIKSKYLYYTYCSN 93
            + QL+P + + Y+ ++  ++ Y YC++
Sbjct: 251 AYHQLSPVEARSYRWVRVNHMVYDYCTD 278

[Close]

BLAST of CSPI01G32710 vs. TAIR10
Match: AT1G11545.1 (AT1G11545.1 xyloglucan endotransglucosylase/hydrolase 8)

HSP 1 Score: 62.0 bits (149), Expect = 2.5e-10
Identity = 28/91 (30.77%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 10  MHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFSILGC------PSGSDCDSQSFLW 69
           M++  SIWN + WA+ G  +K DW + PF + Y+ F++ GC      P+     ++++ W
Sbjct: 199 MYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENW-W 258

Query: 70  NQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 93
           +Q + W L+ TQ+  Y  ++   + Y YC +
Sbjct: 259 DQYDAWHLSKTQKMDYAWVQRNLVVYDYCKD 288

[Close]

BLAST of CSPI01G32710 vs. NCBI nr
Match: gi|449449697|ref|XP_004142601.1| (PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-58
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL
Sbjct: 182 MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 241

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 106
           WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE
Sbjct: 242 WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 286

[Close]

BLAST of CSPI01G32710 vs. NCBI nr
Match: gi|700211616|gb|KGN66712.1| (hypothetical protein Csa_1G662760 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-58
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL
Sbjct: 20  MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 79

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 106
           WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE
Sbjct: 80  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 124

[Close]

BLAST of CSPI01G32710 vs. NCBI nr
Match: gi|481023344|emb|CCH26640.1| (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-58
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL
Sbjct: 184 MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 243

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 106
           WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE
Sbjct: 244 WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE 288

[Close]

BLAST of CSPI01G32710 vs. NCBI nr
Match: gi|700199212|gb|KGN54370.1| (hypothetical protein Csa_4G308600 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           +GGRYPS GM V GSIWNGE WAS+G+KVDWSQ PFQA+Y+ F ILGC  G+ CDSQ+  
Sbjct: 172 IGGRYPSQGMLVQGSIWNGEGWASNGRKVDWSQAPFQANYKSFGILGCQIGNQCDSQTLP 231

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 103
           WN  + W+LNP Q+  Y+ +K KY+Y TYC +P     Y+EC
Sbjct: 232 WNNQDKWELNPKQQSDYENVKRKYVYDTYCLSPRGKN-YREC 272

[Close]

BLAST of CSPI01G32710 vs. NCBI nr
Match: gi|481023336|emb|CCH26636.1| (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 1


Query: 1   MGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFL 60
           +GGRYPS GM V GSIWNGE WAS+G+KVDWSQ PFQA+Y+ F ILGC  G+ CDSQ+  
Sbjct: 178 IGGRYPSQGMLVQGSIWNGEGWASNGRKVDWSQAPFQANYKSFGILGCQIGNQCDSQTLP 237

Query: 61  WNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 103
           WN  + W+LNP Q+  Y+ +K KY+Y TYC +P     Y+EC
Sbjct: 238 WNNQDKWELNPKQQSDYENVKRKYVYDTYCLSPRGKN-YREC 278

The following BLAST results are available for this feature:

BLAST of CSPI01G32710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
XTH1_ARATH	3.8e-16	39.58	Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thal...	[more]
XTH3_ARATH	1.1e-15	38.46	Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=X...	[more]
XTH2_ARATH	9.3e-15	37.37	Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=X...	[more]
XTHA_PHAAN	1.6e-11	35.45	Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XT...	[more]
XTH1_SOYBN	8.2e-11	35.35	Xyloglucan endotransglucosylase/hydrolase 1 OS=Glycine max GN=XTH1 PE=2 SV=2	[more]

BLAST of CSPI01G32710 vs. TrEMBL


Match Name	E-value	Identity	Description
N0DX90_CUCSA	7.3e-59	100.00	Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth30 P...	[more]
A0A0A0M0Q5_CUCSA	7.3e-59	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662760 PE=4 SV=1	[more]
N0DX41_CUCSA	8.4e-31	58.82	Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth26 P...	[more]
A0A0A0KXI7_CUCSA	8.4e-31	58.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308600 PE=4 SV=1	[more]
V7B416_PHAVU	3.6e-21	47.66	Xyloglucan endotransglucosylase/hydrolase OS=Phaseolus vulgaris GN=PHAVU_008G129...	[more]

BLAST of CSPI01G32710 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13080.1	2.1e-17	39.58	xyloglucan endotransglucosylase/hydrolase 1	[more]
AT3G25050.1	6.2e-17	38.46	xyloglucan endotransglucosylase/hydrolase 3	[more]
AT4G13090.1	5.2e-16	37.37	xyloglucan endotransglucosylase/hydrolase 2	[more]
AT4G37800.1	6.6e-11	32.95	xyloglucan endotransglucosylase/hydrolase 7	[more]
AT1G11545.1	2.5e-10	30.77	xyloglucan endotransglucosylase/hydrolase 8	[more]

BLAST of CSPI01G32710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449697\|ref\|XP_004142601.1\|	1.1e-58	100.00	PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sat...	[more]
gi\|700211616\|gb\|KGN66712.1\|	1.1e-58	100.00	hypothetical protein Csa_1G662760 [Cucumis sativus]	[more]
gi\|481023344\|emb\|CCH26640.1\|	1.1e-58	100.00	putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]	[more]
gi\|700199212\|gb\|KGN54370.1\|	1.2e-30	58.82	hypothetical protein Csa_4G308600 [Cucumis sativus]	[more]
gi\|481023336\|emb\|CCH26636.1\|	1.2e-30	58.82	putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013320	ConA-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042546	cell wall biogenesis
biological_process	GO:0010411	xyloglucan metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G32710.1	CSPI01G32710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013320	Concanavalin A-like lectin/glucanase domain	GENE3D	G3DSA:2.60.120.200		coord: 4..103 score: 1.3
IPR013320	Concanavalin A-like lectin/glucanase domain	unknown	SSF49899	Concanavalin A-like lectins/glucanases	coord: 2..94 score: 2.38
None	No IPR available	PANTHER	PTHR31062	FAMILY NOT NAMED	coord: 4..105 score: 2.1
None	No IPR available	PANTHER	PTHR31062:SF43	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 2-RELATED	coord: 4..105 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G32710	Csa1G662760	Cucumber (Chinese Long) v2	cpicuB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G32710	Bottle gourd (USVL1VR-Ls)	cpilsiB059
CSPI01G32710	Melon (DHL92) v3.6.1	cpimedB038
CSPI01G32710	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G32710	Silver-seed gourd	carcpiB0949
CSPI01G32710	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G32710	Watermelon (97103) v2	cpiwmbB035
CSPI01G32710	Cucumber (Gy14) v1	cgycpiB584
CSPI01G32710	Cucurbita maxima (Rimu)	cmacpiB084
CSPI01G32710	Cucurbita moschata (Rifu)	cmocpiB078
CSPI01G32710	Melon (DHL92) v3.5.1	cpimeB044
CSPI01G32710	Watermelon (Charleston Gray)	cpiwcgB041
CSPI01G32710	Watermelon (97103) v1	cpiwmB013