Csa1G612940 (gene) Cucumber (Chinese Long) v2

NameCsa1G612940
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 23993048 .. 23993209 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAGTGGCGGGAAAACGGCTGACGAAGGCTCAAAGTCCCAACCGATCACAATTCACACACTACATTCGCCGGAACTGTACCCCCACGGCCGGCCGGAAACTATCTATATCCAGTGGCCGTCGTCGCTCTTATCTGGCCAAAGACAAATGAAGCTCTGA

mRNA sequence

ATGCCGAGTGGCGGGAAAACGGCTGACGAAGGCTCAAAGTCCCAACCGATCACAATTCACACACTACATTCGCCGGAACTGTACCCCCACGGCCGGCCGGAAACTATCTATATCCAGTGGCCGTCGTCGCTCTTATCTGGCCAAAGACAAATGAAGCTCTGA

Coding sequence (CDS)

ATGCCGAGTGGCGGGAAAACGGCTGACGAAGGCTCAAAGTCCCAACCGATCACAATTCACACACTACATTCGCCGGAACTGTACCCCCACGGCCGGCCGGAAACTATCTATATCCAGTGGCCGTCGTCGCTCTTATCTGGCCAAAGACAAATGAAGCTCTGA

Protein sequence

MPSGGKTADEGSKSQPITIHTLHSPELYPHGRPETIYIQWPSSLLSGQRQMKL*
BLAST of Csa1G612940 vs. TrEMBL
Match: A0A0A0M2Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G612940 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.4e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  MPSGGKTADEGSKSQPITIHTLHSPELYPHGRPETIYIQWPSSLLSGQRQMKL 54
          MPSGGKTADEGSKSQPITIHTLHSPELYPHGRPETIYIQWPSSLLSGQRQMKL
Sbjct: 1  MPSGGKTADEGSKSQPITIHTLHSPELYPHGRPETIYIQWPSSLLSGQRQMKL 53

BLAST of Csa1G612940 vs. NCBI nr
Match: gi|700211375|gb|KGN66471.1| (hypothetical protein Csa_1G612940 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 6.2e-23
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  MPSGGKTADEGSKSQPITIHTLHSPELYPHGRPETIYIQWPSSLLSGQRQMKL 54
          MPSGGKTADEGSKSQPITIHTLHSPELYPHGRPETIYIQWPSSLLSGQRQMKL
Sbjct: 1  MPSGGKTADEGSKSQPITIHTLHSPELYPHGRPETIYIQWPSSLLSGQRQMKL 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0M2Q9_CUCSA4.4e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G612940 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700211375|gb|KGN66471.1|6.2e-23100.00hypothetical protein Csa_1G612940 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G612940.1Csa1G612940.1mRNA