Csa1G555620 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G555620
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein P0022B05.124; contains IPR007493 (Protein of unknown function DUF538)
Location	Chr1 : 20310496 .. 20310940 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAATGTCTATTGTGAGAGAAGAAATGAAAGGAAAAGCAGAAGTATACCATGGAGATGAGTTATGTCAAGAGAAATCCAAACAAATACTGAAAGAGGTAGGGCTTCCAAATGGGCTTTTACCATTGAAAGACATAGAAGAATGTGGGATATTGAGAGAAACAGGGTTTGTTTGGATAAAGCAAAAGAAAAGCACAACTCATAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCAAATGAAGTGACAGCCATTGTAGAGAAGAACAAAATCAAGAAACTTACTGGAGTTAAGACTAAGGAGCTTTTGGTTTGGGTTTCATTAAGTGATATTTATGTTGATGAACCACCTAGTGGGAAAATTTCTTTCCAAACACCAACAGGGCTATTTAGAACTTTTCCTGTCTCAGCTTTTCAAGTTCAAGACCATGTCAAGGAGGTTTAG

mRNA sequence

ATGTCTATTGTGAGAGAAGAAATGAAAGGAAAAGCAGAAGTATACCATGGAGATGAGTTATGTCAAGAGAAATCCAAACAAATACTGAAAGAGGTAGGGCTTCCAAATGGGCTTTTACCATTGAAAGACATAGAAGAATGTGGGATATTGAGAGAAACAGGGTTTGTTTGGATAAAGCAAAAGAAAAGCACAACTCATAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCAAATGAAGTGACAGCCATTGTAGAGAAGAACAAAATCAAGAAACTTACTGGAGTTAAGACTAAGGAGCTTTTGGTTTGGGTTTCATTAAGTGATATTTATGTTGATGAACCACCTAGTGGGAAAATTTCTTTCCAAACACCAACAGGGCTATTTAGAACTTTTCCTGTCTCAGCTTTTCAAGTTCAAGACCATGTCAAGGAGGTTTAG

Coding sequence (CDS)

ATGTCTATTGTGAGAGAAGAAATGAAAGGAAAAGCAGAAGTATACCATGGAGATGAGTTATGTCAAGAGAAATCCAAACAAATACTGAAAGAGGTAGGGCTTCCAAATGGGCTTTTACCATTGAAAGACATAGAAGAATGTGGGATATTGAGAGAAACAGGGTTTGTTTGGATAAAGCAAAAGAAAAGCACAACTCATAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCAAATGAAGTGACAGCCATTGTAGAGAAGAACAAAATCAAGAAACTTACTGGAGTTAAGACTAAGGAGCTTTTGGTTTGGGTTTCATTAAGTGATATTTATGTTGATGAACCACCTAGTGGGAAAATTTCTTTCCAAACACCAACAGGGCTATTTAGAACTTTTCCTGTCTCAGCTTTTCAAGTTCAAGACCATGTCAAGGAGGTTTAG

Protein sequence

MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKISFQTPTGLFRTFPVSAFQVQDHVKEV*

Homology

[Close]

BLAST of Csa1G555620 vs. TrEMBL
Match: A0A0A0LYR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555620 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.4e-76
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


Query: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60
           MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ
Sbjct: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60

Query: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120
           KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI
Sbjct: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120

Query: 121 SFQTPTGLFRTFPVSAFQVQDHVKEV 147
           SFQTPTGLFRTFPVSAFQVQDHVKEV
Sbjct: 121 SFQTPTGLFRTFPVSAFQVQDHVKEV 146

[Close]

BLAST of Csa1G555620 vs. TrEMBL
Match: A0A0A0LTC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181260 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 5.1e-66
Identity = 124/147 (84.35%), Postives = 139/147 (94.56%), Query Frame = 1


Query: 1   MSIVREEMKGKAE-VYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIK 60
           MS+V EE+KGK E VYHGDE+CQEKSK++LKE+GLPNGLLPLKDIEECGI+RETGFVW+K
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGK 120
           QKKSTTHKFEKIGKLVSYA EVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVD+PP+GK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ISFQTPTGLFRTFPVSAFQVQDHVKEV 147
           I+FQTP GL+RTFPVSAFQV++ VK V
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAV 180

[Close]

BLAST of Csa1G555620 vs. TrEMBL
Match: I1LB31_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G145900 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.4e-61
Identity = 114/146 (78.08%), Postives = 134/146 (91.78%), Query Frame = 1


Query: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60
           MS+V  E+K KAEVYHGDELCQEKSK +LKEVGLPNGLLPLKDIEECG  R++GFVW+KQ
Sbjct: 1   MSLVTAEIKAKAEVYHGDELCQEKSKLLLKEVGLPNGLLPLKDIEECGYERDSGFVWLKQ 60

Query: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120
           KKST HKFEKIGKLVSYA E+TA VE  KIKKLTGVKTKELLVW++LS+I+VD+PP+GKI
Sbjct: 61  KKSTNHKFEKIGKLVSYAPEITAYVEVGKIKKLTGVKTKELLVWITLSEIFVDDPPTGKI 120

Query: 121 SFQTPTGLFRTFPVSAFQVQDHVKEV 147
           +F+TP+GLFRTFPVSAF++++ VKEV
Sbjct: 121 TFKTPSGLFRTFPVSAFEIEEPVKEV 146

[Close]

BLAST of Csa1G555620 vs. TrEMBL
Match: C6T1Q2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.4e-61
Identity = 114/146 (78.08%), Postives = 134/146 (91.78%), Query Frame = 1


Query: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60
           MS+V  E+K KAEVYHGDELCQEKSK +LKEVGLPNGLLPLKDIEECG  R++GFVW+KQ
Sbjct: 1   MSLVTAEIKAKAEVYHGDELCQEKSKLLLKEVGLPNGLLPLKDIEECGYERDSGFVWLKQ 60

Query: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120
           KKST HKFEKIGKLVSYA E+TA VE  KIKKLTGVKTKELLVW++LS+I+VD+PP+GKI
Sbjct: 61  KKSTNHKFEKIGKLVSYAPEITAYVEVGKIKKLTGVKTKELLVWITLSEIFVDDPPTGKI 120

Query: 121 SFQTPTGLFRTFPVSAFQVQDHVKEV 147
           +F+TP+GLFRTFPVSAF++++ VKEV
Sbjct: 121 TFKTPSGLFRTFPVSAFEIEEPVKEV 146

[Close]

BLAST of Csa1G555620 vs. TrEMBL
Match: A0A0B2Q409_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_012021 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 8.4e-61
Identity = 114/146 (78.08%), Postives = 134/146 (91.78%), Query Frame = 1


Query: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60
           MS+V  E+K KAEVYHGDELCQEKSK +LKEVGLPNGLLPLKDIEECG  R++GFVW+KQ
Sbjct: 1   MSLVTAEIKAKAEVYHGDELCQEKSKLLLKEVGLPNGLLPLKDIEECGYERDSGFVWLKQ 60

Query: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120
           KKST HKFEKIGKLVSYA E+TA VE  KIKKLTGVKTKELLVW++LS+I+VD+PP+GKI
Sbjct: 61  KKSTNHKFEKIGKLVSYAPEITAYVEVGKIKKLTGVKTKELLVWITLSEIFVDDPPTGKI 120

Query: 121 SFQTPTGLFRTFPVSAFQVQDHVKEV 147
           +F+TP+GLFRTFPVSAF++++ VKEV
Sbjct: 121 TFKTPSGLFRTFPVSAFEIEEPVKEV 146

[Close]

BLAST of Csa1G555620 vs. TAIR10
Match: AT1G56580.1 (AT1G56580.1 Protein of unknown function, DUF538)

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-49
Identity = 95/142 (66.90%), Postives = 115/142 (80.99%), Query Frame = 1


Query: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60
           M +V +E++ +AE Y GDE+C+EK+K+ LKEV +PNGLLPLKDIEE G  RETG VW+KQ
Sbjct: 1   MGLVTDEVRARAEKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLKQ 60

Query: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEP-PSGK 120
           KKS THKFE IGKLVSYA EV A VE  KIKKLTGVK KELL+WV+L+++ +++P  SGK
Sbjct: 61  KKSITHKFEAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSGK 120

Query: 121 ISFQTPTGLFRTFPVSAFQVQD 142
           I+F+TPTGL RTFPVSAF V +
Sbjct: 121 INFRTPTGLSRTFPVSAFVVPE 142

[Close]

BLAST of Csa1G555620 vs. TAIR10
Match: AT1G09310.1 (AT1G09310.1 Protein of unknown function, DUF538)

HSP 1 Score: 191.0 bits (484), Expect = 5.0e-49
Identity = 93/141 (65.96%), Postives = 114/141 (80.85%), Query Frame = 1


Query: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60
           M +V EE++ KAE+Y GDE+C+EK+K  LKE+ +PNGLLPLKDIEE G  RE+G VW+KQ
Sbjct: 1   MGLVTEEVRAKAEMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLKQ 60

Query: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120
           KKS THKF +I KLVSY  EVTAIVE  KIKKLTGVK KELL+WV++++IY +EPP+ KI
Sbjct: 61  KKSITHKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPT-KI 120

Query: 121 SFQTPTGLFRTFPVSAFQVQD 142
           +F+TPT L RTFPV+AF V +
Sbjct: 121 TFKTPTTLSRTFPVTAFIVPE 140

[Close]

BLAST of Csa1G555620 vs. TAIR10
Match: AT5G46230.1 (AT5G46230.1 Protein of unknown function, DUF538)

HSP 1 Score: 138.7 bits (348), Expect = 3.0e-33
Identity = 62/134 (46.27%), Postives = 96/134 (71.64%), Query Frame = 1


Query: 5   REEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQKKST 64
           + + +  AE+ +G+  C++K+K+IL  + LP GLLPL ++ E G  + TG+VWIK K   
Sbjct: 7   KSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNKV 66

Query: 65  THKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKISFQT 124
            H+F+ IG+ VSY +EVTAI+E  ++ +LTG+K+KE+L+WV++S+I+V+     +I+F  
Sbjct: 67  QHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQITFAN 126

Query: 125 PTGLFRTFPVSAFQ 139
           PTGL RTFPV+AF+
Sbjct: 127 PTGLSRTFPVTAFE 140

[Close]

BLAST of Csa1G555620 vs. TAIR10
Match: AT5G49600.1 (AT5G49600.1 Protein of unknown function, DUF538)

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-31
Identity = 69/147 (46.94%), Postives = 96/147 (65.31%), Query Frame = 1


Query: 3   IVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQKK 62
           +V E MK KAEVYHGD+ C+EK   +L E+GLPN LL  K+I+ECG +++TGFVW+K K+
Sbjct: 1   MVTEAMKAKAEVYHGDKTCREKFGSLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHKE 60

Query: 63  STTH----------KFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYV 122
                         +F+ +  +V + +EVTA  E N+IKKLTGVK KE +VW+SL +I V
Sbjct: 61  KKKEDQKRRYQDLLRFDNV--VVCFEDEVTAYFEPNRIKKLTGVKAKEFMVWISLGEIQV 120

Query: 123 DEPPSGKISFQTPTGLF-RTFPVSAFQ 139
           +   SG I+F+T  GL  ++ P+S F+
Sbjct: 121 NR-SSGLITFKTEVGLLSKSLPLSVFE 144

[Close]

BLAST of Csa1G555620 vs. TAIR10
Match: AT4G24130.1 (AT4G24130.1 Protein of unknown function, DUF538)

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-30
Identity = 62/139 (44.60%), Postives = 96/139 (69.06%), Query Frame = 1


Query: 3   IVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQKK 62
           +V  E +G AE+ +G E C ++S ++L+E+G P G++PLK++ ECG +R TG+VW+KQ  
Sbjct: 8   VVGGEREG-AEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDT 67

Query: 63  STTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKISF 122
              H FE     VSY  EVTA V+K  +KK+TGVK+K++ +WV + ++ ++EP S KI F
Sbjct: 68  PYEHFFEATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYF 127

Query: 123 QTPTGLFRTFPVSAFQVQD 142
           +TP G+ R+FPV+ F  ++
Sbjct: 128 KTPMGIGRSFPVTGFMDEE 145

[Close]

BLAST of Csa1G555620 vs. NCBI nr
Match: gi|778662131|ref|XP_004135756.2| (PREDICTED: uncharacterized protein LOC101222618 [Cucumis sativus])

HSP 1 Score: 293.5 bits (750), Expect = 2.0e-76
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


Query: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60
           MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ
Sbjct: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60

Query: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120
           KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI
Sbjct: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120

Query: 121 SFQTPTGLFRTFPVSAFQVQDHVKEV 147
           SFQTPTGLFRTFPVSAFQVQDHVKEV
Sbjct: 121 SFQTPTGLFRTFPVSAFQVQDHVKEV 146

[Close]

BLAST of Csa1G555620 vs. NCBI nr
Match: gi|659099306|ref|XP_008450533.1| (PREDICTED: uncharacterized protein LOC103492107 [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72
Identity = 137/146 (93.84%), Postives = 144/146 (98.63%), Query Frame = 1


Query: 1   MSIVREEMKGKAEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIKQ 60
           MSIVR E+KGKAEVY GDELCQEKSK+ILKE+GLPNGLLPLKDIEECGILRETGFVWI+Q
Sbjct: 1   MSIVRAEVKGKAEVYQGDELCQEKSKEILKEMGLPNGLLPLKDIEECGILRETGFVWIRQ 60

Query: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGKI 120
           KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKL+GVKTKELLVWV+LSDIYVDEPPSGKI
Sbjct: 61  KKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLSGVKTKELLVWVTLSDIYVDEPPSGKI 120

Query: 121 SFQTPTGLFRTFPVSAFQVQDHVKEV 147
           +FQTPTGLFRTFPVSAFQVQDHVKEV
Sbjct: 121 TFQTPTGLFRTFPVSAFQVQDHVKEV 146

[Close]

BLAST of Csa1G555620 vs. NCBI nr
Match: gi|778659689|ref|XP_004139521.2| (PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 7.3e-66
Identity = 124/147 (84.35%), Postives = 139/147 (94.56%), Query Frame = 1


Query: 1   MSIVREEMKGKAE-VYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIK 60
           MS+V EE+KGK E VYHGDE+CQEKSK++LKE+GLPNGLLPLKDIEECGI+RETGFVW+K
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGK 120
           QKKSTTHKFEKIGKLVSYA EVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVD+PP+GK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120

Query: 121 ISFQTPTGLFRTFPVSAFQVQDHVKEV 147
           I+FQTP GL+RTFPVSAFQV++ VK V
Sbjct: 121 ITFQTPAGLYRTFPVSAFQVEEPVKAV 147

[Close]

BLAST of Csa1G555620 vs. NCBI nr
Match: gi|700209917|gb|KGN65013.1| (hypothetical protein Csa_1G181260 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 7.3e-66
Identity = 124/147 (84.35%), Postives = 139/147 (94.56%), Query Frame = 1


Query: 1   MSIVREEMKGKAE-VYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIK 60
           MS+V EE+KGK E VYHGDE+CQEKSK++LKE+GLPNGLLPLKDIEECGI+RETGFVW+K
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGK 120
           QKKSTTHKFEKIGKLVSYA EVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVD+PP+GK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ISFQTPTGLFRTFPVSAFQVQDHVKEV 147
           I+FQTP GL+RTFPVSAFQV++ VK V
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAV 180

[Close]

BLAST of Csa1G555620 vs. NCBI nr
Match: gi|659128666|ref|XP_008464314.1| (PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65
Identity = 124/145 (85.52%), Postives = 138/145 (95.17%), Query Frame = 1


Query: 1   MSIVREEMKGKAE-VYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIK 60
           MS+V EE+KGK E VYHGDE+CQEKSK++LKE+GLPNGLLPLKDIEECGI+RETGFVW+K
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGK 120
           QKKSTTHKFEKIGKLVSYA EVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVD+PP+GK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGK 120

Query: 121 ISFQTPTGLFRTFPVSAFQVQDHVK 145
           I+FQTP GLFRTFPVSAFQV++ VK
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEPVK 145

The following BLAST results are available for this feature:

BLAST of Csa1G555620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYR3_CUCSA	1.4e-76	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555620 PE=4 SV=1	[more]
A0A0A0LTC9_CUCSA	5.1e-66	84.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181260 PE=4 SV=1	[more]
I1LB31_SOYBN	8.4e-61	78.08	Uncharacterized protein OS=Glycine max GN=GLYMA_10G145900 PE=4 SV=1	[more]
C6T1Q2_SOYBN	8.4e-61	78.08	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
A0A0B2Q409_GLYSO	8.4e-61	78.08	Uncharacterized protein OS=Glycine soja GN=glysoja_012021 PE=4 SV=1	[more]

BLAST of Csa1G555620 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56580.1	1.0e-49	66.90	Protein of unknown function, DUF538	[more]
AT1G09310.1	5.0e-49	65.96	Protein of unknown function, DUF538	[more]
AT5G46230.1	3.0e-33	46.27	Protein of unknown function, DUF538	[more]
AT5G49600.1	4.7e-31	46.94	Protein of unknown function, DUF538	[more]
AT4G24130.1	1.8e-30	44.60	Protein of unknown function, DUF538	[more]

BLAST of Csa1G555620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662131\|ref\|XP_004135756.2\|	2.0e-76	100.00	PREDICTED: uncharacterized protein LOC101222618 [Cucumis sativus]	[more]
gi\|659099306\|ref\|XP_008450533.1\|	4.0e-72	93.84	PREDICTED: uncharacterized protein LOC103492107 [Cucumis melo]	[more]
gi\|778659689\|ref\|XP_004139521.2\|	7.3e-66	84.35	PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus]	[more]
gi\|700209917\|gb\|KGN65013.1\|	7.3e-66	84.35	hypothetical protein Csa_1G181260 [Cucumis sativus]	[more]
gi\|659128666\|ref\|XP_008464314.1\|	1.2e-65	85.52	PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G555620.1	Csa1G555620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 7..141 score: 1.0
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 27..138 score: 6.6
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 6..142 score: 1.83
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 1..146 score: 3.0
None	No IPR available	PANTHER	PTHR31676:SF10	SUBFAMILY NOT NAMED	coord: 1..146 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G555620	MELO3C015251	Melon (DHL92) v3.5.1	cumeB058
Csa1G555620	MELO3C015251.2	Melon (DHL92) v3.6.1	cumedB052
Csa1G555620	CSPI01G25510	Wild cucumber (PI 183967)	cpicuB001
Csa1G555620	Cucsa.050810	Cucumber (Gy14) v1	cgycuB033
Csa1G555620	CmaCh10G011660	Cucurbita maxima (Rimu)	cmacuB053
Csa1G555620	CmoCh10G012440	Cucurbita moschata (Rifu)	cmocuB042
Csa1G555620	Cp4.1LG18g00130	Cucurbita pepo (Zucchini)	cpecuB367
Csa1G555620	CsGy1G024880	Cucumber (Gy14) v2	cgybcuB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G555620	Watermelon (Charleston Gray)	cuwcgB040
Csa1G555620	Watermelon (97103) v1	cuwmB013
Csa1G555620	Cucurbita pepo (Zucchini)	cpecuB661
Csa1G555620	Bottle gourd (USVL1VR-Ls)	culsiB075
Csa1G555620	Watermelon (97103) v2	cuwmbB037
Csa1G555620	Wax gourd	cuwgoB085
Csa1G555620	Cucurbita maxima (Rimu)	cmacuB106
Csa1G555620	Cucurbita moschata (Rifu)	cmocuB096