Csa1G537350 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G537350
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 19358667 .. 19358931 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCGGTGACAAAGACACCCAAGATCTTTTATGGAAAATCCTCCATAGCAGTAGCAACTCTGAGGCTGTTTAAGCTGTGGCCAACGAGGACCACCCTCTTGTCGGAGGAAAACTAGTCAAGAACTTTGTCAAGGGGTGAAAGTACTGAAAAGCTGAGGATATAGTCTTAGAGTGTATGGGGTTGACGTCGGAGGTAGCCATGTCGACAGCAGTGACGTTGTGGCCCTTCGATTAAAGAAAGGTGGAGAGCTTGTACCATGA

mRNA sequence

ATGGTGGCGGTGACAAAGACACCCAAGATCTTTTATGGAAAATCCTCCATAGCAGTAGCAACTCTGAGGCTGTTTAAGCTTCTTAGAGTGTATGGGGTTGACGTCGGAGGTAGCCATGTCGACAGCAGTGACGTTGTGGCCCTTCGATTAAAGAAAGGTGGAGAGCTTGTACCATGA

Coding sequence (CDS)

ATGGTGGCGGTGACAAAGACACCCAAGATCTTTTATGGAAAATCCTCCATAGCAGTAGCAACTCTGAGGCTGTTTAAGCTTCTTAGAGTGTATGGGGTTGACGTCGGAGGTAGCCATGTCGACAGCAGTGACGTTGTGGCCCTTCGATTAAAGAAAGGTGGAGAGCTTGTACCATGA

Protein sequence

MVAVTKTPKIFYGKSSIAVATLRLFKLLRVYGVDVGGSHVDSSDVVALRLKKGGELVP*
Homology
[Close]
BLAST of Csa1G537350 vs. TrEMBL
Match: A0A0A0LVE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537350 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 6.2e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MVAVTKTPKIFYGKSSIAVATLRLFKLLRVYGVDVGGSHVDSSDVVALRLKKGGELVP 59
          MVAVTKTPKIFYGKSSIAVATLRLFKLLRVYGVDVGGSHVDSSDVVALRLKKGGELVP
Sbjct: 1  MVAVTKTPKIFYGKSSIAVATLRLFKLLRVYGVDVGGSHVDSSDVVALRLKKGGELVP 58

[Close]
BLAST of Csa1G537350 vs. NCBI nr
Match: gi|700210789|gb|KGN65885.1| (hypothetical protein Csa_1G537350 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 8.9e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MVAVTKTPKIFYGKSSIAVATLRLFKLLRVYGVDVGGSHVDSSDVVALRLKKGGELVP 59
          MVAVTKTPKIFYGKSSIAVATLRLFKLLRVYGVDVGGSHVDSSDVVALRLKKGGELVP
Sbjct: 1  MVAVTKTPKIFYGKSSIAVATLRLFKLLRVYGVDVGGSHVDSSDVVALRLKKGGELVP 58

The following BLAST results are available for this feature:
BLAST of Csa1G537350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVE4_CUCSA6.2e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G537350 PE=4 SV=1[more]
BLAST of Csa1G537350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210789|gb|KGN65885.1|8.9e-23100.00hypothetical protein Csa_1G537350 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G537350.1Csa1G537350.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G537350Bottle gourd (USVL1VR-Ls)culsiB023
Csa1G537350Cucumber (Gy14) v2cgybcuB002
Csa1G537350Melon (DHL92) v3.6.1cumedB025
Csa1G537350Silver-seed gourdcarcuB0231
Csa1G537350Silver-seed gourdcarcuB0453
Csa1G537350Watermelon (97103) v2cuwmbB045
Csa1G537350Cucumber (Gy14) v1cgycuB255
Csa1G537350Cucurbita maxima (Rimu)cmacuB220
Csa1G537350Cucurbita maxima (Rimu)cmacuB392
Csa1G537350Cucurbita moschata (Rifu)cmocuB205
Csa1G537350Cucurbita moschata (Rifu)cmocuB381
Csa1G537350Melon (DHL92) v3.5.1cumeB032
Csa1G537350Watermelon (Charleston Gray)cuwcgB049
Csa1G537350Watermelon (97103) v1cuwmB025
Csa1G537350Cucurbita pepo (Zucchini)cpecuB030
Csa1G537350Cucurbita pepo (Zucchini)cpecuB508