Csa1G533720 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G533720
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Mitochondrial 28S ribosomal protein S29-like protein; contains IPR019368 (Ribosomal protein S23/S29, mitochondrial)
Location	Chr1 : 19096561 .. 19101196 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATACCCATTTGTTAGGAGGTCACCCGCGTTCTGCAGAATACCGTCTTCGTTCCCATCTCCCACCGGCCGAAAATGATGCGGTCAATTCTCAGAGCAACAGCTGCAGCCTCCAAACACCACTTCTCCAATCGAAACCCTTCTCCCATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCCCCGTCAAGAAAGGAAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGCGATGACCCCTCCGCCCCTGCTGCTGCTTCCAACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTTGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCCGCTTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATTAAAGTACGTATGTTTTCTACATTGTTTATGAGTGCATGTTTATTGGGATTTTTATTCATTTCTTTGCGAAATGGAAGTATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTGTGGGGATGGTCAAGGAGTTTGAAGAGTCTATACGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTACTGTCTCCGGCTGGTATTACTTTGCTTCTACTCTCATGTCTTCAAATGGTTCTCGTGTTATTTAGTTATATCGAAGATACTGGTAATTTAGGGTGGAGACTGGACTCTTGAACGTCTGAATCTTTGGTCGAACAAATATATTTAGCTGTTCCTATTCAAATGTCCAGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGGTGGTTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAAGCTGAAGATGTTCTGAGAGTGAGGACTTTTTCCTGCTACTTAAGAATTAGATTGAAGTACTGGCGTGTTTTTTTCAGGATCTTCTAGTGCATTTGTCATGATTATGCAGGTCCAAATTTCAATAGTTTTCTTACTGAAGTCTTTGGGATCGCTACCTCATGTTCTATTTTTCCGTGTTTTCTAACTCTCAAACCTTGCATTTCCATCGGATTTAGACATGTAGTTTAATGCTGTATTTCCTAATTTCATTGATGGATGTTAATTCTTACTAAAGGTTGTTGAGAATCTTGACAAGGGAAATGATCTCTCATGATCATGATTATTCATGGTAGCTGACTGGGAAATGTTTTGCCAAGTGTTCACCGTTTTGTGATGAGCTTTCAGGAGATGATGTGAGGACTTGGGATAAATATATAATACTGAACAGTTGACTTATATACTTTTCTTTCGCGGGCTGGTTTGAACCAGGATTTTGTGAAGTACAATGAGACCCAGTTAAGACAATTGCCATGCCAAATATCTGAACCTATACCGTTGGGAGAGGGCGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGTAGCTGTTGGGGTGGTGGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAAGTGAGACACAAAACTACATCTACCCTTTATTTGATTTCTAAAATTAAGTTTCTTGGACGAATTAAATCTTCCAAAACTAATTTAGTTGCAATAATGATTGTTACTTCTTGTCCAGTATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTTAGTACTACTTCTTTAGATTGAAAATATTGTGTTCTAGTTAATTCTGTTTATTACAATTCATTGGGCGTTCCTAGGATATCATATCGGTTTTTGTGTCTCGTGCATTTTAGCTAGCCCCTCTACTTCCATCGTTTTTGTAGTCCCTTTGCCTTGAAATTTCAATTTTTGCTTTGAAACTCCTGTCCTTCACTTCTTTACTTATTTTTCTGGTTAGATGTTAGAGACTAAAACACGACAGATAGGGCGATATGATTCAAAAAAGGAAAGTAAAGTTGAAAGAATTATGGAATGAACGATGTTTTTGTGTACACAAGTGAAGAAATATAATAGTTATAGCTTTTTGTGGGAGTCTTTCTGAGTTACTTATAATTTTGCTGCGTGTTTCAAGTTACAACTATGTTTTCTCTTAATCTTTTTTTATTTGATTTTTCCTATCTTTTTCTTTTCCTATTTCCCATTTAGATTAGCTTTGGAAATGCATGGTTCAATTTTATATGAATTTTCTTAGGTTTTGGATTATCCCATAAAAAAGAAAAAAAAAAAAAAGAGGACAAAGAACGGGTTTAAGGCAATGGGGCTCATCAATAGAGTATCAGAATTAGGGAGTACAAATAGATCATCAGGAGAAAGAGAATTGGATGGCTCATTCAATAATATTCTGTCAATGGCACAACTTGACCAGTGAGTTAAAAATGGAAAACCCAAGTTCAACAATAGTTCAGATGTTTGGTTGTAAGTGGTTGGAGGATGTAAAAGTTAGGTTCAAGTACACGTTTGGCTCAAATTTAGTTGTGTGCAGTAGGTTCTTGAAACTTAAAAATTTATAGTTTTTAAATTTTTTATATAGTGTCGGGACTGAAGAAGAATTGAATCATATTCTTTGAAGTTGTGCTTTTGCAACGTGTACTTGGAGTTTATTTATTTCTTCGTGTTTGGTCCATTTAGCCATTGAGATTCAGGGAGATGGTTAAAGAGTTCCTTCCCACCCTACCCTTCTGCGAGAGGGAGAGGTTCCTAATTCCTATGGCAAGTTGGGGTTGGTGCGGAATTTCAGGAGGAGAGGAACAACATATCCTTTAGAGAAGCTGAGAGGGGGTTCTTGTGACATTTGGTTCCTTTGTCAGGTTTCATGTATCTCTTTAGGTGTTGTTGATGAAGTCTTTTTGTAATTGTTTTCTAAGTCTTATTCTTCTTGACTAGAGTAATTTATCTCTTAAAAGAGTTCTCTTTTCTAGCCTTGGTGTTTTTGGATGTCATTGTATTCTTTCAGGGTTGACCCATTTTAATTATTATTATTATTTTATTACTATTACTTTTTTACTTTAATAATGTGTTTGAACTCTGAAAACCAACTGATTAATCTTTGGATTCTCAAGTTCCGTGTGTCTAAATAGGTTTCTAATCTATGAGACGCTATTTAAAGTTCAAAGACTTGTTAGACTCAAAATTAATAACTTAAAGACATTAAAAGCTCTTATCGTTTGGAAATGTGTGATATTTTTAAAGTAAAGGTGCCTTGTACCCATTAAACTCGGCTTTAGAAGTTTCAAACAAAAGATTTTTTTTTTTTCTAATCAATGATGAGAATTTCTAATTTTTGGCAGGTAAAAGCTTTTAGGTCTATGATGCATGACGATATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGGTATGCTTATGTGGTTCTTATTTTGAAAGCAAACTAATTTCACTGAAATAAATTAAGAATTTAATTTTAACTGAAAAAATAAAGGTTACAAAAGATTTGTTTGATCAAGGATTTAGAATAAGCCCCCTATTTTGCTATTAGAGTAGATCAGAGTTTTTAAAAAGATGGTACGCCAACTCCCGTCTTTTGACCTATATTCTAAAAGCTTTCTTATTTCGACGTTCTCAAGTCTTATTGATACTGGATGAACTAGAAAGCTCGTTAATAACAACCAACCTAGGAGAATCGTGTAGGTACAGATTTCTATTAAGAAAAACAACTGTCTTGGAAAACTATCAAAAGTTCCATCAACCCTTGGAAGTTTCGTTGCTGCAGATTAGAGTTTCCTTGGCCAAAACAATAGGTTGTTGCATAATTTTCAGTTGACAAGGTAGGGACACTGCTAACTGCTAAGATTGAGGATCCCTTTTGTAATTGTTTACTGTATACATTAATGACCGTCGTCAAAACCTTAATTGGTGGGAAGGTTGATGAAGTCTAATTGCTTACTGAGTCTTTTCTATGGGTAAGCATTCAGTACATTTGAGGGGATTAATAGTAATGAACAAGATGCGTATTATCTGTAAGATGAATGACGCCTATCTCTTTTTAGTCTAAAATCATTTGCATATATTCGTCTGCTTAGTCGCATACTTACTTGGGCATGATTTTCATTAGCTCACAGCCTGGTTTCTTTGCAAATGTTGCATTGTAGGGTATTGTTTGCTTTAGTTAGTTGTTTGTTTTCTTGACAGACAAAGACTGATACGTCGTGAAGCCTTCTCTGAGGATGGCTGGAAAAAGATATACTATTTGTCGAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGTTGA

mRNA sequence

ATGATGCGGTCAATTCTCAGAGCAACAGCTGCAGCCTCCAAACACCACTTCTCCAATCGAAACCCTTCTCCCATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCCCCGTCAAGAAAGGAAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGCGATGACCCCTCCGCCCCTGCTGCTGCTTCCAACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTTGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCCGCTTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATTAAATATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTGTGGGGATGGTCAAGGAGTTTGAAGAGTCTATACGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTACTGTCTCCGGCTGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGGTGGTTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAAGCTGAAGATGTTCTGAGAGATTTTGTGAAGTACAATGAGACCCAGTTAAGACAATTGCCATGCCAAATATCTGAACCTATACCGTTGGGAGAGGGCGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGTAGCTGTTGGGGTGGTGGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGATATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGACAAAGACTGATACGTCGTGAAGCCTTCTCTGAGGATGGCTGGAAAAAGATATACTATTTGTCGAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGTTGA

Coding sequence (CDS)

ATGATGCGGTCAATTCTCAGAGCAACAGCTGCAGCCTCCAAACACCACTTCTCCAATCGAAACCCTTCTCCCATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCCCCGTCAAGAAAGGAAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGCGATGACCCCTCCGCCCCTGCTGCTGCTTCCAACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTTGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCCGCTTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATTAAATATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTGTGGGGATGGTCAAGGAGTTTGAAGAGTCTATACGAAGTGCTGTGCTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTACTGTCTCCGGCTGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGGTGGTTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAAGCTGAAGATGTTCTGAGAGATTTTGTGAAGTACAATGAGACCCAGTTAAGACAATTGCCATGCCAAATATCTGAACCTATACCGTTGGGAGAGGGCGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGTAGCTGTTGGGGTGGTGGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCAGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGATATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGACAAAGACTGATACGTCGTGAAGCCTTCTCTGAGGATGGCTGGAAAAAGATATACTATTTGTCGAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGTTGA

Protein sequence

MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR*

Homology

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BLAST of Csa1G533720 vs. Swiss-Prot
Match: RT29_MOUSE (28S ribosomal protein S29, mitochondrial OS=Mus musculus GN=Dap3 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-08
Identity = 65/281 (23.13%), Postives = 117/281 (41.64%), Query Frame = 1


Query: 103 TSASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRD 162
           TS S  ++   +  G ++ + ++ L  V P GLP   + + +    + ++VR+  L+L  
Sbjct: 44  TSDSDPAKHGEQHEGQHYSIPLQDLKTVFPHGLPPRYMMQVKTFGEACLMVRKPALELLG 103

Query: 163 NFRRVVDPSLLSPAGSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWT 222
             +     +   PA      + +L G    GK+++L   V +     WL+L++P    W 
Sbjct: 104 YLKNT---NFAHPA-----VRYLLYGEKGTGKTLSLCHAVHFCARHDWLILHIPDAHLWV 163

Query: 223 HG--GFFFKNPQTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAK 282
                          +D P++A   L++F   NE  L Q+  Q        E        
Sbjct: 164 KNCRELLQSTHNKQRFDQPLEASTWLKNFKTTNERFLSQIKVQEKYVWNKREST------ 223

Query: 283 GADSMRMPEGSTLYDLIDTG---IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNN-W 342
                   +GS L ++++ G   +++   AVGVV++  K  S +    +L+A+D  N  W
Sbjct: 224 -------EKGSPLGEVVEQGLTRVRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALW 283

Query: 343 FTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGA 378
              +  +E  T+     I   EL++V   R M+ +D   GA
Sbjct: 284 GRTTLKKEDRTL-----IAPEELSLVHNLRKMVKNDWHGGA 298

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BLAST of Csa1G533720 vs. TrEMBL
Match: A0A0A0LVC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533720 PE=4 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 2.9e-261
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 1


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 456
           RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of Csa1G533720 vs. TrEMBL
Match: A0A0A0KG66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G310480 PE=4 SV=1)

HSP 1 Score: 880.6 bits (2274), Expect = 8.5e-253
Identity = 441/455 (96.92%), Postives = 446/455 (98.02%), Query Frame = 1


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRAT+AASKHH  NRNP+PILSLTSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE QLRQLPCQI EPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 456
           RLIRREAFSED WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of Csa1G533720 vs. TrEMBL
Match: M5VYB8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006017mg PE=4 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 8.6e-189
Identity = 333/428 (77.80%), Postives = 376/428 (87.85%), Query Frame = 1


Query: 31  NYSAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDDKIRARRLAAEENDT 90
           +YS+K  KS VKK KKGK + D  A  D      A +D+DAAL D+K RARRL A+END 
Sbjct: 2   SYSSKDKKSTVKKAKKGKDKNDPAAATDD-----AVSDVDAALFDEKARARRLQADENDP 61

Query: 91  SLDVGPNGRPLFTSASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPVGMVKEFEESIRSA 150
           SLDVGPNGRPLFT+  +LSQLTRKDA +YFKL ME LN VLPEGLP+GMVKEFE++++SA
Sbjct: 62  SLDVGPNGRPLFTATPTLSQLTRKDACSYFKLKMEELNNVLPEGLPLGMVKEFEDAMQSA 121

Query: 151 VLVRQSFLDLRDNFRRVVDPSLLSPA--GSKIRKQIVLDGPVNCGKSIALAMLVQWAREE 210
           VLVRQSFLDLRDNFR +VDP L S    G+K+RKQIVLDGPV+CGKSIAL+MLVQWAR E
Sbjct: 122 VLVRQSFLDLRDNFRWIVDPPLHSSTTKGTKVRKQIVLDGPVSCGKSIALSMLVQWARGE 181

Query: 211 GWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEPI 270
           GWLVLYVP GR WT+GGFF+KNPQTGLWDTPVQAE++L+DF+K+NE++L+QL CQI +PI
Sbjct: 182 GWLVLYVPRGRDWTYGGFFYKNPQTGLWDTPVQAENILKDFLKFNESRLKQLFCQIFDPI 241

Query: 271 PLGEGAGVGMAK-GADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVL 330
           PLGEGAGVG  K G D+M MP+GSTLYDL+DTGIKHTH AVGVVVRLRKELSLVKDIPVL
Sbjct: 242 PLGEGAGVGWMKDGIDTMAMPDGSTLYDLVDTGIKHTHAAVGVVVRLRKELSLVKDIPVL 301

Query: 331 IAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKL 390
           IAIDQYN+WFTFSEYEEPVTVRSTRPIHA+ELA VKAFRSM HDD+MVGAFSHSTAVGKL
Sbjct: 302 IAIDQYNSWFTFSEYEEPVTVRSTRPIHAKELATVKAFRSMRHDDLMVGAFSHSTAVGKL 361

Query: 391 RQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDGWKKIYYLSNGNGAEM 450
           RQDLP+VP  ARVNFPRY+LDEAA+V HYYLRQRLIRREAF+E+ WKKIYYLSNGNGAE+
Sbjct: 362 RQDLPEVPTDARVNFPRYTLDEAAAVCHYYLRQRLIRREAFTEENWKKIYYLSNGNGAEI 421

Query: 451 RWLAPLMR 456
           RWL PLMR
Sbjct: 422 RWLVPLMR 424

[Close]

BLAST of Csa1G533720 vs. TrEMBL
Match: A0A067LBC9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17368 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 2.2e-184
Identity = 320/427 (74.94%), Postives = 363/427 (85.01%), Query Frame = 1


Query: 32  YSAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDD-KIRARRLAAEENDT 91
           +S+KT K+ V K KKG  ++  K+  + +A +  ++D DAALS+D   RAR+LA +E + 
Sbjct: 41  FSSKTAKANVSKFKKGDQKSKKKSSGETAAGSTPADDFDAALSEDGSTRARQLAEDEKNP 100

Query: 92  SLDVGPNGRPLFTSASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPVGMVKEFEESIRSA 151
           SLDVGPNGRPLFTS +SLSQL+R+D  TYFK +  GLN VLPEGLP+GMVKEFEES+R A
Sbjct: 101 SLDVGPNGRPLFTSTASLSQLSRRDTCTYFKFSEAGLNGVLPEGLPMGMVKEFEESMRRA 160

Query: 152 VLVRQSFLDLRDNFRRVVDPSLLSPAGS--KIRKQIVLDGPVNCGKSIALAMLVQWAREE 211
           +LVRQSFLDLRDNFRR+VDP L S  G   K+RKQIVLDGPV+CGKSI LAMLV WAR+E
Sbjct: 161 LLVRQSFLDLRDNFRRIVDPPLRSSDGKGPKLRKQIVLDGPVSCGKSITLAMLVHWARDE 220

Query: 212 GWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEPI 271
           GWLV YVP GR WTHGGFF+KNP+TG WDTP QA ++L+DFVKYNE+ L+QLPC IS+P+
Sbjct: 221 GWLVFYVPKGREWTHGGFFYKNPETGFWDTPAQAANILKDFVKYNESHLKQLPCHISDPV 280

Query: 272 PLGEGAGVGMAKGADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLI 331
           PLGEGAGVG  KG +SM +PEGSTLYDLI  GIKHTH AVGVVVRLRKELSLVKDIPVLI
Sbjct: 281 PLGEGAGVGWMKGVESMPVPEGSTLYDLIQIGIKHTHAAVGVVVRLRKELSLVKDIPVLI 340

Query: 332 AIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLR 391
           AIDQYNNWFTFSEYEE VT RS RPIHARELA V AFRSM HDDMMVGAFSHSTAVGKLR
Sbjct: 341 AIDQYNNWFTFSEYEESVTSRSCRPIHARELATVNAFRSMTHDDMMVGAFSHSTAVGKLR 400

Query: 392 QDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDGWKKIYYLSNGNGAEMR 451
           QDLPDVP GARVN PRYSLDEAA+V HYYLRQRL+RREAFSE+ WKK++YL+NGNGAEMR
Sbjct: 401 QDLPDVPTGARVNLPRYSLDEAAAVSHYYLRQRLVRREAFSEENWKKVFYLANGNGAEMR 460

Query: 452 WLAPLMR 456
           WL PLMR
Sbjct: 461 WLVPLMR 467

[Close]

BLAST of Csa1G533720 vs. TrEMBL
Match: D7SJN5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07560 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 4.6e-182
Identity = 327/460 (71.09%), Postives = 379/460 (82.39%), Query Frame = 1


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSL---TSNYSAKTTKSPVKKGKKGKSEADAKAGD 60
           M+R+ILRA  AAS+       P+   S    +SNYS+K TKS + K KK KS+ DAK+ +
Sbjct: 1   MLRAILRAATAASRTAPDRSIPAVFASSKLSSSNYSSKNTKSSLVKAKKAKSKPDAKSEE 60

Query: 61  DPSAPAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAG 120
              A AAA++D  + L D++ R RRLA ++ D SLDVGPNGR LFTSA+++SQL+RKD  
Sbjct: 61  ---ASAAAADDGLSDLLDEEARDRRLAEDDKDPSLDVGPNGRALFTSATTISQLSRKDTC 120

Query: 121 TYFKLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAG 180
           TY K + EGLN VLPEGL  GMVKEFEES RSA+LVR+SFLDLRDNFRR+VDP L S  G
Sbjct: 121 TYMKFSTEGLNAVLPEGLTAGMVKEFEESRRSALLVRRSFLDLRDNFRRIVDPPLRSSDG 180

Query: 181 S--KIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGL 240
              K+ KQI+LDGPV+ GKSIALAMLV WAR+EGWLV YVP GR WTHGGFF+KNPQTG 
Sbjct: 181 KGPKVLKQIILDGPVSSGKSIALAMLVHWARDEGWLVFYVPRGRDWTHGGFFYKNPQTGF 240

Query: 241 WDTPVQAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYD 300
           WDTPVQA ++L+DF+K NE+ L+QL CQIS+PIPLGEGAGVG  KG DSM MPEGSTLYD
Sbjct: 241 WDTPVQAANILQDFLKRNESHLKQLTCQISDPIPLGEGAGVGWMKGVDSMAMPEGSTLYD 300

Query: 301 LIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIH 360
           L+ TG+ HTH AVGVVVRLRKELSLVKDIPVLIA+DQYN+WFTF+EYEE VTVRS RPIH
Sbjct: 301 LVQTGMSHTHAAVGVVVRLRKELSLVKDIPVLIAVDQYNSWFTFTEYEEAVTVRSCRPIH 360

Query: 361 ARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFH 420
           A+ELA V AFRSMMH+DMMVGAFSHSTAVGKLRQ+LPDVP  AR+ FPRYSL+EAA+V H
Sbjct: 361 AKELATVNAFRSMMHNDMMVGAFSHSTAVGKLRQELPDVPKYARIYFPRYSLEEAATVSH 420

Query: 421 YYLRQRLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 456
           YYLRQRL+RRE FS++ WKK+YYLSNGNGAEMRWLAPLMR
Sbjct: 421 YYLRQRLVRREIFSDENWKKLYYLSNGNGAEMRWLAPLMR 457

[Close]

BLAST of Csa1G533720 vs. TAIR10
Match: AT1G16870.1 (AT1G16870.1 mitochondrial 28S ribosomal protein S29-related)

HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-165
Identity = 289/428 (67.52%), Postives = 336/428 (78.50%), Query Frame = 1


Query: 33  SAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDDKI--RARRLAAEENDT 92
           S+K+TKS + K KK + +     G DP A  A   +  AA  DD    RA+RLA +E   
Sbjct: 53  SSKSTKSSITKTKKSEGKKSKPKGGDPGAAGAEEGEFGAAGGDDLEAGRAKRLADDEKIP 112

Query: 93  SLDVGPNGRPLFTSA-SSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPVGMVKEFEESIRS 152
           SLDVGPNGRPLFT   ++LSQLT KD G+YFK +   L  VLPEGL  G+  EF ES R 
Sbjct: 113 SLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFNESWRP 172

Query: 153 AVLVRQSFLDLRDNFRRVVDPSLL--SPAGSKIRKQIVLDGPVNCGKSIALAMLVQWARE 212
           A+LVR+S+L LRDNFRR+ DP +      G K++KQIVLDGPV CGKSIALAMLV WAR+
Sbjct: 173 ALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSIALAMLVHWARD 232

Query: 213 EGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEP 272
           EGWLVLY P GR WTHGG+F+KNP TG WDTP+QAE++L+DFVK+NE++LR+L C+I +P
Sbjct: 233 EGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPLQAENILKDFVKFNESRLRELRCKIHDP 292

Query: 273 IPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVL 332
           I LGEGAGVG  KGAD+M +PE STLYDL+  GIK TH AV VVVRLRKELS+VKD+PVL
Sbjct: 293 IVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVKDVPVL 352

Query: 333 IAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKL 392
           I IDQYN+WFTFSE+EEPVT RS RPIHAREL  V AFRSMMH+DMMVGAFSHSTAVGKL
Sbjct: 353 IVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHSTAVGKL 412

Query: 393 RQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDGWKKIYYLSNGNGAEM 452
           R+DLPDVP+ AR  FPRYSLDEA +V +YYLRQRL+RRE F+E+ WKKIYYL+NGNGAEM
Sbjct: 413 RKDLPDVPVDARQQFPRYSLDEAEAVCYYYLRQRLVRREVFNEENWKKIYYLANGNGAEM 472

Query: 453 RWLAPLMR 456
           RWLAP MR
Sbjct: 473 RWLAPFMR 480

[Close]

BLAST of Csa1G533720 vs. NCBI nr
Match: gi|778661865|ref|XP_004145300.2| (PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 908.7 bits (2347), Expect = 4.2e-261
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 1


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 456
           RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of Csa1G533720 vs. NCBI nr
Match: gi|778714640|ref|XP_011657272.1| (PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 880.6 bits (2274), Expect = 1.2e-252
Identity = 441/455 (96.92%), Postives = 446/455 (98.02%), Query Frame = 1


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRAT+AASKHH  NRNP+PILSLTSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE QLRQLPCQI EPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 456
           RLIRREAFSED WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of Csa1G533720 vs. NCBI nr
Match: gi|659114941|ref|XP_008457304.1| (PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo])

HSP 1 Score: 872.5 bits (2253), Expect = 3.3e-250
Identity = 436/455 (95.82%), Postives = 445/455 (97.80%), Query Frame = 1


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRATAAASKHHF NRNPSPILS TSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A +AAS++LDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  A-SAASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLP+GMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE +LRQLPCQISEPIPLGEG GVGMAKGADSMRMP+GSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 456
           RLIRREAFSE+GWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of Csa1G533720 vs. NCBI nr
Match: gi|645215391|ref|XP_008230816.1| (PREDICTED: 28S ribosomal protein S29, mitochondrial [Prunus mume])

HSP 1 Score: 672.5 bits (1734), Expect = 5.0e-190
Identity = 344/460 (74.78%), Postives = 391/460 (85.00%), Query Frame = 1


Query: 1   MMRSILRATAAASKHHFSNRNPSPI-LSLTSNYSAKTTKSPVKKGKKGKSEAD-AKAGDD 60
           M+R++LR    +         P P  L+ T +YS+K  KS VKK KKGK + D A A DD
Sbjct: 1   MLRTLLRRATGSGCPR-----PDPWRLTATMSYSSKDNKSTVKKTKKGKDKNDPAAAADD 60

Query: 61  PSAPAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGT 120
                 A +D+DAAL D+K RARRL A+END SLDVGPNGRPLFT+  +LSQLTRKDA +
Sbjct: 61  ------AVSDVDAALFDEKARARRLQADENDPSLDVGPNGRPLFTATPTLSQLTRKDACS 120

Query: 121 YFKLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA-- 180
           YFKL ME LN VLPEGLP+GMVKEFE++++SAVLVRQSFLDLRDNFR +VDP L S    
Sbjct: 121 YFKLKMEELNNVLPEGLPLGMVKEFEDAMQSAVLVRQSFLDLRDNFRWIVDPPLHSSTTK 180

Query: 181 GSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240
           G+K+RKQIVLDGPV+CGKSIAL+MLVQWAR EGWLVLYVP GR WT+GGFF+KNPQTGLW
Sbjct: 181 GTKVRKQIVLDGPVSCGKSIALSMLVQWARGEGWLVLYVPRGRDWTYGGFFYKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAK-GADSMRMPEGSTLYD 300
           DTPVQAE++L+DF+K+NE++L+QL CQI +PIPLGEGAGVG  K G D+M MP+GSTLYD
Sbjct: 241 DTPVQAENILKDFLKFNESRLKQLFCQIFDPIPLGEGAGVGWMKDGIDTMAMPDGSTLYD 300

Query: 301 LIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIH 360
           L+DTGIKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYN+WFTFSEYEEPVTVRSTRPIH
Sbjct: 301 LVDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNSWFTFSEYEEPVTVRSTRPIH 360

Query: 361 ARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFH 420
           A+ELA VKAFRSM HDDMMVGAFSHSTAVGKLRQDLP+VP  ARVNFPRY+LDEAA+V H
Sbjct: 361 AKELATVKAFRSMRHDDMMVGAFSHSTAVGKLRQDLPEVPTDARVNFPRYTLDEAAAVCH 420

Query: 421 YYLRQRLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 456
           YYLRQRLIRREAF+E+ WKKIYYLSNGNGAE+RWL PLMR
Sbjct: 421 YYLRQRLIRREAFTEENWKKIYYLSNGNGAEIRWLVPLMR 449

[Close]

BLAST of Csa1G533720 vs. NCBI nr
Match: gi|595824418|ref|XP_007205230.1| (hypothetical protein PRUPE_ppa006017mg [Prunus persica])

HSP 1 Score: 667.9 bits (1722), Expect = 1.2e-188
Identity = 333/428 (77.80%), Postives = 376/428 (87.85%), Query Frame = 1


Query: 31  NYSAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDDKIRARRLAAEENDT 90
           +YS+K  KS VKK KKGK + D  A  D      A +D+DAAL D+K RARRL A+END 
Sbjct: 2   SYSSKDKKSTVKKAKKGKDKNDPAAATDD-----AVSDVDAALFDEKARARRLQADENDP 61

Query: 91  SLDVGPNGRPLFTSASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPVGMVKEFEESIRSA 150
           SLDVGPNGRPLFT+  +LSQLTRKDA +YFKL ME LN VLPEGLP+GMVKEFE++++SA
Sbjct: 62  SLDVGPNGRPLFTATPTLSQLTRKDACSYFKLKMEELNNVLPEGLPLGMVKEFEDAMQSA 121

Query: 151 VLVRQSFLDLRDNFRRVVDPSLLSPA--GSKIRKQIVLDGPVNCGKSIALAMLVQWAREE 210
           VLVRQSFLDLRDNFR +VDP L S    G+K+RKQIVLDGPV+CGKSIAL+MLVQWAR E
Sbjct: 122 VLVRQSFLDLRDNFRWIVDPPLHSSTTKGTKVRKQIVLDGPVSCGKSIALSMLVQWARGE 181

Query: 211 GWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEPI 270
           GWLVLYVP GR WT+GGFF+KNPQTGLWDTPVQAE++L+DF+K+NE++L+QL CQI +PI
Sbjct: 182 GWLVLYVPRGRDWTYGGFFYKNPQTGLWDTPVQAENILKDFLKFNESRLKQLFCQIFDPI 241

Query: 271 PLGEGAGVGMAK-GADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVL 330
           PLGEGAGVG  K G D+M MP+GSTLYDL+DTGIKHTH AVGVVVRLRKELSLVKDIPVL
Sbjct: 242 PLGEGAGVGWMKDGIDTMAMPDGSTLYDLVDTGIKHTHAAVGVVVRLRKELSLVKDIPVL 301

Query: 331 IAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKL 390
           IAIDQYN+WFTFSEYEEPVTVRSTRPIHA+ELA VKAFRSM HDD+MVGAFSHSTAVGKL
Sbjct: 302 IAIDQYNSWFTFSEYEEPVTVRSTRPIHAKELATVKAFRSMRHDDLMVGAFSHSTAVGKL 361

Query: 391 RQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDGWKKIYYLSNGNGAEM 450
           RQDLP+VP  ARVNFPRY+LDEAA+V HYYLRQRLIRREAF+E+ WKKIYYLSNGNGAE+
Sbjct: 362 RQDLPEVPTDARVNFPRYTLDEAAAVCHYYLRQRLIRREAFTEENWKKIYYLSNGNGAEI 421

Query: 451 RWLAPLMR 456
           RWL PLMR
Sbjct: 422 RWLVPLMR 424

The following BLAST results are available for this feature:

BLAST of Csa1G533720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RT29_MOUSE	1.9e-08	23.13	28S ribosomal protein S29, mitochondrial OS=Mus musculus GN=Dap3 PE=1 SV=1	[more]

BLAST of Csa1G533720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVC2_CUCSA	2.9e-261	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533720 PE=4 SV=1	[more]
A0A0A0KG66_CUCSA	8.5e-253	96.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G310480 PE=4 SV=1	[more]
M5VYB8_PRUPE	8.6e-189	77.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006017mg PE=4 SV=1	[more]
A0A067LBC9_JATCU	2.2e-184	74.94	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17368 PE=4 SV=1	[more]
D7SJN5_VITVI	4.6e-182	71.09	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g07560 PE=4 SV=...	[more]

BLAST of Csa1G533720 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16870.1	1.6e-165	67.52	mitochondrial 28S ribosomal protein S29-related	[more]

BLAST of Csa1G533720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778661865\|ref\|XP_004145300.2\|	4.2e-261	100.00	PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Cucumis sativus]	[more]
gi\|778714640\|ref\|XP_011657272.1\|	1.2e-252	96.92	PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Cucumis sativus]	[more]
gi\|659114941\|ref\|XP_008457304.1\|	3.3e-250	95.82	PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo]	[more]
gi\|645215391\|ref\|XP_008230816.1\|	5.0e-190	74.78	PREDICTED: 28S ribosomal protein S29, mitochondrial [Prunus mume]	[more]
gi\|595824418\|ref\|XP_007205230.1\|	1.2e-188	77.80	hypothetical protein PRUPE_ppa006017mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019368	Ribosomal_S23/S29_mit

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:1901566	organonitrogen compound biosynthetic process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G533720.1	Csa1G533720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019368	Ribosomal protein S23/S29, mitochondrial	PFAM	PF10236	DAP3	coord: 177..377 score: 8.7
None	No IPR available	PANTHER	PTHR12810	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29	coord: 78..455 score: 1.2E
None	No IPR available	PANTHER	PTHR12810:SF0	28S RIBOSOMAL PROTEIN S29, MITOCHONDRIAL	coord: 78..455 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G533720	Cla008107	Watermelon (97103) v1	cuwmB021
Csa1G533720	MELO3C020493	Melon (DHL92) v3.5.1	cumeB028
Csa1G533720	ClCG03G000160	Watermelon (Charleston Gray)	cuwcgB047
Csa1G533720	Lsi02G012210	Bottle gourd (USVL1VR-Ls)	culsiB030
Csa1G533720	MELO3C020493.2	Melon (DHL92) v3.6.1	cumedB023
Csa1G533720	Cla97C03G050970	Watermelon (97103) v2	cuwmbB043
Csa1G533720	Bhi08G000356	Wax gourd	cuwgoB048
Csa1G533720	CSPI01G24460	Wild cucumber (PI 183967)	cpicuB001
Csa1G533720	Cucsa.152040	Cucumber (Gy14) v1	cgycuB219
Csa1G533720	CmaCh01G007140	Cucurbita maxima (Rimu)	cmacuB427
Csa1G533720	CmaCh13G000250	Cucurbita maxima (Rimu)	cmacuB219
Csa1G533720	CmoCh13G000150	Cucurbita moschata (Rifu)	cmocuB204
Csa1G533720	CmoCh01G007410	Cucurbita moschata (Rifu)	cmocuB416
Csa1G533720	Cp4.1LG02g11100	Cucurbita pepo (Zucchini)	cpecuB532
Csa1G533720	Cp4.1LG20g07780	Cucurbita pepo (Zucchini)	cpecuB507
Csa1G533720	CsGy1G023920	Cucumber (Gy14) v2	cgybcuB002
Csa1G533720	Carg26957	Silver-seed gourd	carcuB0358
Csa1G533720	Carg07030	Silver-seed gourd	carcuB0548

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G533720	Cucurbita moschata (Rifu)	cmocuB197
Csa1G533720	Cucurbita maxima (Rimu)	cmacuB213