Csa1G423140 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTAATAAATTGGCAAAGGCCTCAACACTTTATTTTATTCTGTTGTGTTCGATGCTTCAATTTTTGCAAAGCCCCTCTTCCACTCCAACAAGACTCTTTCAACACTTCATACGTTTTCCCAATTCCAATATTTTCCGTTCTTCTCAATTCCAATTCCCAAATCGCACTCCAATCACAGTTTCAATGGCTACTCTCTCCCCCGACACTTCTTCCGAAGGATCCATTACTCACGTTATCTTTGATATGGACGGACTCTTATTGGGTAAATTTCTCCGTTATTATTGTGTTTTCATTTCCTATTGTATTATTTCCATCTTTCAGATCTGTTCCATCATATTTCCATATCCTTCTCTGCTGCTTCTTACTTATTTATTCTATTTTGGTTCGGCGTTAACACTCATCCTATAAAGCTAAATTATGTAATTAAATTGAAAGTTTGATTTGATCACCACTTGATTAAACTGGGCCTGAATGCTTTTTCGGTATAGCATATGATGTGCTTGTTTAACTGTTCTACTAGATCTGCATAGACTTTGTGTTAAATTTTTATGAACTAATTGGGAACACTTCTGCGGCAGATACTGAGGGGTTTTACACTGAAGTACAAGAGAAAATTCTGGCTAGGTATGATAAAACTTTTGATTGGTCACTTAAGGCAAAGATGATGGGCAGGAAAGCTATAGAAGCTGCTCGGGTCTTTGTTGAAGAGAGTGGGATTAGTGATTCTCTTAGTCCGGAGGATTTTCTTGTGGAAAGAGAAGACATGCTACGAAGCTTGTTTCCGCAAAGTGAGCTTATGCCAGGTTAGTATTAGCACTTTAGATGCTGATGATCAAGTTTCTATAATTATGTCAGATTTCACTCTGTTTGTGATAATTTTGAGAGAGATGCCAAAGCAAACCTCAACGATGTTGTGAATGAAAAATGAAAATGATGTCTTACAAGGGATTTGAAATTTTCCAATGGATTTTGCCTAAATCTGAAAAATGATTCGGAGAAAAGTACATTGATTGATAGTACCTTTTATAGCGAGGCAAATTTTTATGGTGAACAGTTAGGAAATCATTTTAGAAAGCTATACATTTGGAAATGTTTTTATCTGATGATTCTTCATGCACTGTAGTAGGACTGAGTTGTGAATTACATTCTGGCTTTCCAAACAAAGGGATGTTATTTTTTGAAGAATGAGGTAAAGGTTGGATTTTTCCTATTGAAGCAGAGTCTATAAATGTTTGTTACCCTTTAGCTGTAAGTTCTACTGTAGAAAGAGGGAGTTTTCCCACTTTGAAAATAGAAATGGAATGAGACAGGTCATGTTTGATTCCCCCTTGCCCTTAACTTACCAGTTAACTGCTTACTATTGCATTCTCGCTTAAGCTTTCTCTATATGGTTGATTACTTTATTGGATTCTCGAGACCCCTAATCTTTCCTGAGAACTGGTTCCACACCGTTGTTTGATAGATGGGGGTATACTTTAGATTTATTATGCTGTTGCACCAACAAAATAACAAGCCTCAGGTATTGTTTCAGCTGAAAATGATAGAAAGTTCACTTTGTTAACATACCAAACTTGAACTTTAATTAGACATAGATTCTTTTCAGGATTTTTAGTTCAATAAAAGCTACCACTTTCACAAAGTCTCGTACCAAAAAGAGGAAGAAGAGGTGAGAGAAAAATGGGATTTGATTGAGTGGAGGGTTAAGATGAACATATACTTCAATAGAGTAGATAGTTTTATATTACTAAAAGAAAAAAAGAACAATGATCGGAGATTTCGATCTGGGCCTCTTAGACAAGCAAATCTCACTAATTTGCAGATTTATTAACATTCGCCAGTTCCTACAAAAAGTGGAATATAATATCTTCTACTTTTAAGATGAGAATAGGGACTAATTAAGCTAAGCGTATATGAGAGAGACAGGTCTCCCACACATGGAAACTTGATGCTTAGCTTAAAGTCACTCCATCCTTTTTCTTAGCCACCTGACAAATTTAGCTCAATTCCTCTCACTAGATCACCTGTTCTTAGATATCTGTGCTTTCTTTCCACTCACCAGCTAGTGGTACGACCTCACTTAAACAATATCTGTTCTTGTGGTTTATGTCTGAATTAATATTTTTCATTATCATGAATTGCTTTCAGTTAACACCATTTTTTCCTATTTATTGTAGGAGCTAGCCGGTTGATCAGACATCTTCATGCAAAAGGAGTACCATTTGGCTTGGCCACCGGGTATATTTAATTTTATATGATATTTCATTGCTTGGCAGATTTTCATATCATGAATTCCAGCCATCTTGTGCAAATCATTGTTCCTTGTCTTTTTTGTAGTGTTTGTATCTATACCTTTATTATCTGATAATTCTCAACAGATCTCATAGACGTCATTTTGAACTTAAAACACAAAGACATGGTGAACTTTTTAAGTTGATGCATCACATTGTTCTTGGTGATGATCCAGAGGTTAAACAAGGGAAACCATCGCCGGATATATTTCTTGCAGCTGCTAAAAGATTTGCGGTATGGCTGTAACTTCGAATTAAACTCATGGTTCACTCTTTCAGTTACTAGCATTCAAGTGCTTCCCTTTTCTTTTTCTTTTCTTTTATCATACAATTTGACGATGGCTATGCTACATTTTTTAAACAGGATGCTCCAGTGGATGCGGAAAGAACCCTTGTTTTTGAAGATGCCCCCTCAGGTGTTCTTGCAGCTAAAAATGCAGGAATGTAAGTTGTGGAATTTAAAGTTTTAAGCATTAATGTGTTTACTATTTTAACATTTTGACAACACCAGGAAAGTCATCCCCCAATTTGTTTAACTTTACCTCAATAGCCTTCGCAGCACCTCATGTTTTCAATTAACACTTGATCTTTGATAGTACATACCCACCTTAGTTTTCAATAATTTCTTTGTTTTTTGGATAACCAAAGTTTTCAATGTGAAGTATATTGCTGTTCCATATTGATCCTATGGTGGAAAATTGATACTTGCGGTACCAAACCAACTCCTTTGAATTGCTCGTTTTTCCTGTCCCATATTGAATCTTGCCTCTTTTCTTCCTTCTAATTCTAATTAGTGATTTCTAATAAATCCAAACCAAATGCAATGTCAAAACTCTTCATTTCAAAATTCCATTCATTCTGGTCTATATAATTATACAATGTAGGCAATTGTTAAGGCTATCAGTACTCGAGAACTCATTGCTCTATAAGAAGTACGAAAATTTTAATTCCATTTCGTTCTCTTTTTGGTTGATAATTTCAGTTTATGGTTGTGAAAGATTGATTTTGACTAACATCTCAAACTCTTGCCAGTGCTTTCAGCTTTGCATATTCTGTATTTTCAAAATAGGTTTCCTTAATTTTAAAACTAAAATATTTTTGGGTTCTGCATTATTGTCTAAACTCAAATATGCAATTTCTTTTGAAGATGATCTGTTAGTTTCAGAATCCTTTATAGGTTTACTGGGAAAACAAATGTATTCAAAGATTGATTAAATTATACTTCTAGACCTTCAACCTTTCTCCTTTTGATACTTGTCCCTATATTCATATCAGTCCTTTGTATTTTTGTAAATGTTTCAGTTTAGTCTAACTCCAAATTATAATTAGAATCTGACATAAAATCATGTAGCAGTGAGCACCTCAACTTTCATATGCATGCATATGACATATAAAGGTGCCTCATACGCATTGTCATAGGTTGGAATTATGACACAAACCTAAATCAATATGTTTACAAAGTACAAAAACAAAAATTGAAGTAACAAGGAATAGAAAATAGAATCATAATTTGATTGTTACAATTCTGATTATTGCAATGGAGGCTGAAAAACTTGTGTTGACATTGATAATCAGGAAGGTAATTATGGTTCCAGATCCAAGGTTGGATAGTTCTCATCATGGCAATGCAAATCAGGTATTGAGTTCCCTCTTGGATTTCAACCCCAAGGAATGGGGTCTGCCTCCTTTTGAAGATTCAGAAAGCTAGGTCCTCACATTGGGTTCATGCTGCTGAGATACAAAACTCACCATTTCAATAGAATGGTTAGATTCTTTTTCTCCACATTTCAAGAGAAAGGCTCCCATCAAGTTATTTATTAGTTTGCTTGGCCTTTCTTGCCTAAACTATGAACATTGATTACCAATTTCTATGATTGAAATGGGACTAATGTTGCAGTTTCTCCTTTTTGACTTGCTTATCTATTGATCTTAACAGAGAGATGAATCTCAAAATTGTTGTAATTGTTGATCAGAATCTCACATTTATTACTATTATTGTTATTACTTTGGTCTATTTGTTCATATAATAAAACTAAATGTATTCGGCTAAAATGAGCTTAGTT ATGCTTCAATTTTTGCAAAGCCCCTCTTCCACTCCAACAAGACTCTTTCAACACTTCATACGTTTTCCCAATTCCAATATTTTCCGTTCTTCTCAATTCCAATTCCCAAATCGCACTCCAATCACAGTTTCAATGGCTACTCTCTCCCCCGACACTTCTTCCGAAGGATCCATTACTCACGTTATCTTTGATATGGACGGACTCTTATTGGATACTGAGGGGTTTTACACTGAAGTACAAGAGAAAATTCTGGCTAGGTATGATAAAACTTTTGATTGGTCACTTAAGGCAAAGATGATGGGCAGGAAAGCTATAGAAGCTGCTCGGGTCTTTGTTGAAGAGAGTGGGATTAGTGATTCTCTTAGTCCGGAGGATTTTCTTGTGGAAAGAGAAGACATGCTACGAAGCTTGTTTCCGCAAAGTGAGCTTATGCCAGGAGCTAGCCGGTTGATCAGACATCTTCATGCAAAAGGAGTACCATTTGGCTTGGCCACCGGATCTCATAGACGTCATTTTGAACTTAAAACACAAAGACATGGTGAACTTTTTAAGTTGATGCATCACATTGTTCTTGGTGATGATCCAGAGGTTAAACAAGGGAAACCATCGCCGGATATATTTCTTGCAGCTGCTAAAAGATTTGCGGATGCTCCAGTGGATGCGGAAAGAACCCTTGTTTTTGAAGATGCCCCCTCAGGTGTTCTTGCAGCTAAAAATGCAGGAATGAAGGTAATTATGGTTCCAGATCCAAGGTTGGATAGTTCTCATCATGGCAATGCAAATCAGGTATTGAGTTCCCTCTTGGATTTCAACCCCAAGGAATGGGGTCTGCCTCCTTTTGAAGATTCAGAAAGCTAG ATGCTTCAATTTTTGCAAAGCCCCTCTTCCACTCCAACAAGACTCTTTCAACACTTCATACGTTTTCCCAATTCCAATATTTTCCGTTCTTCTCAATTCCAATTCCCAAATCGCACTCCAATCACAGTTTCAATGGCTACTCTCTCCCCCGACACTTCTTCCGAAGGATCCATTACTCACGTTATCTTTGATATGGACGGACTCTTATTGGATACTGAGGGGTTTTACACTGAAGTACAAGAGAAAATTCTGGCTAGGTATGATAAAACTTTTGATTGGTCACTTAAGGCAAAGATGATGGGCAGGAAAGCTATAGAAGCTGCTCGGGTCTTTGTTGAAGAGAGTGGGATTAGTGATTCTCTTAGTCCGGAGGATTTTCTTGTGGAAAGAGAAGACATGCTACGAAGCTTGTTTCCGCAAAGTGAGCTTATGCCAGGAGCTAGCCGGTTGATCAGACATCTTCATGCAAAAGGAGTACCATTTGGCTTGGCCACCGGATCTCATAGACGTCATTTTGAACTTAAAACACAAAGACATGGTGAACTTTTTAAGTTGATGCATCACATTGTTCTTGGTGATGATCCAGAGGTTAAACAAGGGAAACCATCGCCGGATATATTTCTTGCAGCTGCTAAAAGATTTGCGGATGCTCCAGTGGATGCGGAAAGAACCCTTGTTTTTGAAGATGCCCCCTCAGGTGTTCTTGCAGCTAAAAATGCAGGAATGAAGGTAATTATGGTTCCAGATCCAAGGTTGGATAGTTCTCATCATGGCAATGCAAATCAGGTATTGAGTTCCCTCTTGGATTTCAACCCCAAGGAATGGGGTCTGCCTCCTTTTGAAGATTCAGAAAGCTAG MLQFLQSPSSTPTRLFQHFIRFPNSNIFRSSQFQFPNRTPITVSMATLSPDTSSEGSITHVIFDMDGLLLDTEGFYTEVQEKILARYDKTFDWSLKAKMMGRKAIEAARVFVEESGISDSLSPEDFLVEREDMLRSLFPQSELMPGASRLIRHLHAKGVPFGLATGSHRRHFELKTQRHGELFKLMHHIVLGDDPEVKQGKPSPDIFLAAAKRFADAPVDAERTLVFEDAPSGVLAAKNAGMKVIMVPDPRLDSSHHGNANQVLSSLLDFNPKEWGLPPFEDSES*
BLAST of Csa1G423140 vs. Swiss-Prot
Match: GPP1_ARATH ((DL)-glycerol-3-phosphatase 1 OS=Arabidopsis thaliana GN=GPP1 PE=1 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 2.9e-103 Identity = 188/267 (70.41%), Postives = 215/267 (80.52%), Query Frame = 1
BLAST of Csa1G423140 vs. Swiss-Prot
Match: GPP2_ARATH ((DL)-glycerol-3-phosphatase 2 OS=Arabidopsis thaliana GN=GPP2 PE=1 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 2.9e-103 Identity = 181/232 (78.02%), Postives = 204/232 (87.93%), Query Frame = 1
BLAST of Csa1G423140 vs. Swiss-Prot
Match: HDHD1_HUMAN (Pseudouridine-5'-phosphatase OS=Homo sapiens GN=PUDP PE=1 SV=3) HSP 1 Score: 228.8 bits (582), Expect = 7.5e-59 Identity = 117/224 (52.23%), Postives = 152/224 (67.86%), Query Frame = 1
BLAST of Csa1G423140 vs. Swiss-Prot
Match: GS1_DROME (Probable pseudouridine-5'-phosphatase OS=Drosophila melanogaster GN=Gs1l PE=2 SV=2) HSP 1 Score: 204.1 bits (518), Expect = 2.0e-51 Identity = 113/226 (50.00%), Postives = 143/226 (63.27%), Query Frame = 1
BLAST of Csa1G423140 vs. Swiss-Prot
Match: HDHD1_MOUSE (Pseudouridine-5'-phosphatase OS=Mus musculus GN=Pudp PE=1 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.6e-51 Identity = 109/225 (48.44%), Postives = 143/225 (63.56%), Query Frame = 1
BLAST of Csa1G423140 vs. TrEMBL
Match: A0A0A0LZT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423140 PE=4 SV=1) HSP 1 Score: 572.0 bits (1473), Expect = 4.0e-160 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of Csa1G423140 vs. TrEMBL
Match: A0A068U494_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041424001 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 6.3e-105 Identity = 189/234 (80.77%), Postives = 209/234 (89.32%), Query Frame = 1
BLAST of Csa1G423140 vs. TrEMBL
Match: A0A0D2Q5Z1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G005400 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104 Identity = 189/227 (83.26%), Postives = 207/227 (91.19%), Query Frame = 1
BLAST of Csa1G423140 vs. TrEMBL
Match: V4MHD6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025858mg PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 2.4e-104 Identity = 196/272 (72.06%), Postives = 223/272 (81.99%), Query Frame = 1
BLAST of Csa1G423140 vs. TrEMBL
Match: A0A0B0N427_GOSAR (Pseudouridine-5'-monophosphatase OS=Gossypium arboreum GN=F383_12388 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 3.1e-104 Identity = 188/227 (82.82%), Postives = 207/227 (91.19%), Query Frame = 1
BLAST of Csa1G423140 vs. TAIR10
Match: AT5G57440.1 (AT5G57440.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 376.3 bits (965), Expect = 1.6e-104 Identity = 181/232 (78.02%), Postives = 204/232 (87.93%), Query Frame = 1
BLAST of Csa1G423140 vs. TAIR10
Match: AT4G25840.1 (AT4G25840.1 glycerol-3-phosphatase 1) HSP 1 Score: 376.3 bits (965), Expect = 1.6e-104 Identity = 188/267 (70.41%), Postives = 215/267 (80.52%), Query Frame = 1
BLAST of Csa1G423140 vs. TAIR10
Match: AT4G21470.1 (AT4G21470.1 riboflavin kinase/FMN hydrolase) HSP 1 Score: 153.3 bits (386), Expect = 2.3e-37 Identity = 89/222 (40.09%), Postives = 130/222 (58.56%), Query Frame = 1
BLAST of Csa1G423140 vs. TAIR10
Match: AT1G56500.1 (AT1G56500.1 haloacid dehalogenase-like hydrolase family protein) HSP 1 Score: 63.5 bits (153), Expect = 2.4e-10 Identity = 70/255 (27.45%), Postives = 110/255 (43.14%), Query Frame = 1
BLAST of Csa1G423140 vs. NCBI nr
Match: gi|449457163|ref|XP_004146318.1| (PREDICTED: (DL)-glycerol-3-phosphatase 2-like [Cucumis sativus]) HSP 1 Score: 572.0 bits (1473), Expect = 5.8e-160 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 1
BLAST of Csa1G423140 vs. NCBI nr
Match: gi|659107301|ref|XP_008453605.1| (PREDICTED: (DL)-glycerol-3-phosphatase 2 [Cucumis melo]) HSP 1 Score: 540.8 bits (1392), Expect = 1.4e-150 Identity = 270/285 (94.74%), Postives = 275/285 (96.49%), Query Frame = 1
BLAST of Csa1G423140 vs. NCBI nr
Match: gi|645234189|ref|XP_008223698.1| (PREDICTED: (DL)-glycerol-3-phosphatase 2 [Prunus mume]) HSP 1 Score: 394.0 bits (1011), Expect = 2.2e-106 Identity = 201/281 (71.53%), Postives = 227/281 (80.78%), Query Frame = 1
BLAST of Csa1G423140 vs. NCBI nr
Match: gi|1000941124|ref|XP_002532237.2| (PREDICTED: (DL)-glycerol-3-phosphatase 2 [Ricinus communis]) HSP 1 Score: 393.7 bits (1010), Expect = 2.8e-106 Identity = 196/270 (72.59%), Postives = 223/270 (82.59%), Query Frame = 1
BLAST of Csa1G423140 vs. NCBI nr
Match: gi|747047855|ref|XP_011069913.1| (PREDICTED: (DL)-glycerol-3-phosphatase 2 [Sesamum indicum]) HSP 1 Score: 390.2 bits (1001), Expect = 3.1e-105 Identity = 192/233 (82.40%), Postives = 210/233 (90.13%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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