BLAST of Csa1G418260 vs. Swiss-Prot
Match:
PPR65_ARATH (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1)
HSP 1 Score: 677.9 bits (1748), Expect = 1.3e-193
Identity = 331/565 (58.58%), Postives = 427/565 (75.58%), Query Frame = 1
Query: 233 VQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQG 292
+Q PSL +YN M+K A KVL LF +LR GL+PD FT P VLK+IG LR V +G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 293 EKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRC 352
EKV G+ VK G++ D+YV NSL+ MY L +E K+FDEM RD VSWN +IS YV
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 353 RRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRID 412
RFEDAI F+ M QE N K DE T+VSTLSAC+ALKNLE+G+ I+ +V E + RI
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 413 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 472
NAL+DM+ KCGCL+ AR +FD M KNV CWTSM+ GY++ G + EAR LF++SPV+DVV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 473 LWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 532
LWTAM+NGYVQF+ FD+A+ LFR MQ ++PD F +V+LLTGCAQ GALEQGKWIHGY+
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 533 DENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEAL 592
+ENR+T+D VVGTAL++MY+KCGC++ +LE+FYE++++DTASWTS+I GLAMNG + AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 593 RLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDL 652
L+ EME VG + D ITF+ VL+AC+HGG V EGR+ F+SM + H ++PK EH C+IDL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 653 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS 712
L RAGLLDEAEELI ++ E+ E +VP+Y +LLSA R + NV + ER+A+KLE +E DS
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 713 SIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDP--SHPE 772
S HTLLA++YAS +RWED VRRKMK+LG++K PGCS IE+DG+ HEF+VGD SHP+
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545
Query: 773 MMEICSMLNRVTGQLLGLKESQVES 796
M EI SML++ T +L L+ +++S
Sbjct: 546 MDEINSMLHQTTNLMLDLEHKEIDS 570
BLAST of Csa1G418260 vs. Swiss-Prot
Match:
PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 512.7 bits (1319), Expect = 7.4e-144
Identity = 258/607 (42.50%), Postives = 397/607 (65.40%), Query Frame = 1
Query: 177 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 236
+ L CK + LKQIQ+Q+ GL D ++L+AFCA S L Y+ KI +++P
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 237 SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLW---PDGFTYPFVLKAIGCLRDVRQGE 296
++F +NV ++ +++ ++ LL++Q+ G PD FTYP + K LR G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 297 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 356
+ G ++K ++L ++V+N+ I M+ ++ENA+K+FDE RD VSWN +I+GY +
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 357 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRID 416
E AI ++ M+ EG KPD+ T++ +S+C+ L +L G E + YV++ L T +
Sbjct: 237 EAEKAIYVYKLMESEG-VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 296
Query: 417 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 476
NAL+DM++KCG ++ AR IFD + + ++ WT+MISGY CG L +R LFD +DVV
Sbjct: 297 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 356
Query: 477 LWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 536
LW AMI G VQ DA+ALF+EMQ KPD+ T++ L+ C+QLGAL+ G WIH Y+
Sbjct: 357 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 416
Query: 537 DENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEAL 596
++ ++++V +GT+L++MY+KCG + ++L +F+ ++ +++ ++T+II GLA++G S A+
Sbjct: 417 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 476
Query: 597 RLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDL 656
F+EM G PD+ITFIG+LSAC HGG+++ GR +F+ MK + P+++HY ++DL
Sbjct: 477 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 536
Query: 657 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS 716
LGRAGLL+EA+ L++ +P+E V +GALL CR+H NV++GE+ AKKL ++ DS
Sbjct: 537 LGRAGLLEEADRLMESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDS 596
Query: 717 SIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMM 776
I+ LL +Y + WEDAK+ RR M E GV+K+PGCS IEV+GIV EF+V D S PE
Sbjct: 597 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 656
Query: 777 EICSMLN 780
+I L+
Sbjct: 657 KIYDRLH 659
BLAST of Csa1G418260 vs. Swiss-Prot
Match:
PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2)
HSP 1 Score: 497.3 bits (1279), Expect = 3.2e-139
Identity = 252/609 (41.38%), Postives = 397/609 (65.19%), Query Frame = 1
Query: 177 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 236
I L CK+ DQ KQ+ SQ G+ + KL F G++ YA K+F + +P
Sbjct: 38 ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97
Query: 237 SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRD---VRQGE 296
+ V+N M+K ++K + + L+ + ++G+ PD T+PF+L G RD + G+
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN--GLKRDGGALACGK 157
Query: 297 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 356
K+ +VK G+ + YV N+L+ MY ++ A+ +FD D SWN+MISGY R +
Sbjct: 158 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 217
Query: 357 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRID 416
+E++I EM++ P T++ LSAC+ +K+ +L +H YV + + + R++
Sbjct: 218 EYEESIELLVEMERN-LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 277
Query: 417 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 476
NAL++ YA CG ++IA IF M ++VI WTS++ GY+ G+L+ AR FD+ PVRD +
Sbjct: 278 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 337
Query: 477 LWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 536
WT MI+GY++ F++++ +FREMQ + PD+FT+V++LT CA LG+LE G+WI Y+
Sbjct: 338 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 397
Query: 537 DENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEAL 596
D+N+I DVVVG ALI+MY KCGC +K+ ++F++++ +D +WT+++ GLA NG+ EA+
Sbjct: 398 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 457
Query: 597 RLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDL 656
++F +M+ + +PDDIT++GVLSAC+H G+V++ R+FF M+ HRIEP + HYGC++D+
Sbjct: 458 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 517
Query: 657 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS 716
LGRAGL+ EA E+++++P+ IV +GALL A R+HN+ M E AKK+ +E +
Sbjct: 518 LGRAGLVKEAYEILRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNG 577
Query: 717 SIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMM 776
+++ LL NIYA RW+D ++VRRK+ ++ +KK PG SLIEV+G HEF+ GD SH +
Sbjct: 578 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 637
Query: 777 EICSMLNRV 782
EI L +
Sbjct: 638 EIYMKLEEL 640
BLAST of Csa1G418260 vs. Swiss-Prot
Match:
PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 456.4 bits (1173), Expect = 6.3e-127
Identity = 228/612 (37.25%), Postives = 374/612 (61.11%), Query Frame = 1
Query: 177 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 236
I + C S+ QLKQ + R G D + +KL A A SS +L YA K+F+ + P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 237 SLFVYNVMVKMYAKR-GILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKV 296
+ F +N +++ YA + + + E +P+ +T+PF++KA + + G+ +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 297 RGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRF 356
G VK+ + D +V NSLI Y+ ++++A K+F + +D VSWN MI+G+V+
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 357 EDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNA 416
+ A+ F++M+ E + K T+V LSAC ++NLE G ++ +Y+ + + + NA
Sbjct: 214 DKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 273
Query: 417 LLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLW 476
+LDMY KCG + A+ +FD M K+ + WT+M+ GY D AR++ + P +D+V W
Sbjct: 274 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 333
Query: 477 TAMINGYVQFHHFDDAVALFREMQIQR-VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLD 536
A+I+ Y Q ++A+ +F E+Q+Q+ +K ++ T+V+ L+ CAQ+GALE G+WIH Y+
Sbjct: 334 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 393
Query: 537 ENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALR 596
++ I M+ V +ALI MYSKCG ++KS E+F +E +D W+++I GLAM+G +EA+
Sbjct: 394 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 453
Query: 597 LFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLL 656
+F +M+ KP+ +TF V ACSH GLV+E F+ M+ + I P+ +HY C++D+L
Sbjct: 454 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 513
Query: 657 GRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSS 716
GR+G L++A + I+ +PI V +GALL AC+IH N+++ E +L +E +
Sbjct: 514 GRSGYLEKAVKFIEAMPIPPSTSV---WGALLGACKIHANLNLAEMACTRLLELEPRNDG 573
Query: 717 IHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMME 776
H LL+NIYA + +WE+ ++R+ M+ G+KK PGCS IE+DG++HEFL GD +HP +
Sbjct: 574 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 633
Query: 777 ICSMLNRVTGQL 786
+ L+ V +L
Sbjct: 634 VYGKLHEVMEKL 641
HSP 2 Score: 146.0 bits (367), Expect = 1.8e-33
Identity = 140/550 (25.45%), Postives = 244/550 (44.36%), Query Frame = 1
Query: 219 SLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPF 278
S G+L A K+F +++ + +N M+ + ++G K L LF+++ + + T
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 279 VLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRD 338
VL A +R++ G +V +I + ++++ + N+++DMY + ++E+AK+LFD M +D
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 339 SVSWNVMISGYVRCRRFEDAINTFREMQQ-------------EGNEKPDEA--------- 398
+V+W M+ GY +E A M Q E N KP+EA
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 399 ---------TVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNALLDMYAKCGCLN 458
T+VSTLSAC + LELG IH+Y++K + + +AL+ MY+KCG L
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 459 IARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDV----VLWTAMINGYV 518
+R +F+ + ++V W++MI G G EA D+F K +V V +T +
Sbjct: 418 KSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 519 QFHHFDDAVALFREMQIQ-RVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDV 578
D+A +LF +M+ + P++ ++ + G LE+ +++ I
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV---KFIEAMPIPPST 537
Query: 579 VVGTALI---EMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEM 638
V AL+ ++++ + + ELE ++ + + A GK L M
Sbjct: 538 SVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHM 597
Query: 639 ERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGC---VIDLLGR 698
G K + S+ G++ E F S H + KV YG V++ L
Sbjct: 598 RVTGLKKEP-----GCSSIEIDGMIHE----FLSGDNAHPMSEKV--YGKLHEVMEKLKS 657
Query: 699 AGLLDEAEELIQEIPIENC-EIVVPLYGALLSAC--RIHNNVDMGERLAKKLENIESCDS 723
G E +++Q I E E + L+ L+ C I R+ K L C
Sbjct: 658 NGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDC-H 712
BLAST of Csa1G418260 vs. Swiss-Prot
Match:
PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)
HSP 1 Score: 436.4 bits (1121), Expect = 6.8e-121
Identity = 228/596 (38.26%), Postives = 365/596 (61.24%), Query Frame = 1
Query: 191 QIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAK 250
QI I ++G D N L+ F A+ G L A K+F+ + + ++ + M+ YA+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAEC--GELDSARKVFDEMSERNVVSWTSMICGYAR 214
Query: 251 RGILRKVL-LLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNY 310
R + + L F+ +R++ + P+ T V+ A L D+ GEKV FI +G+++++
Sbjct: 215 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 274
Query: 311 VYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEG 370
+ ++L+DMY + + ++ AK+LFDE + N M S YVR +A+ F M G
Sbjct: 275 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 334
Query: 371 NEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTT--RIDNALLDMYAKCGCLNI 430
+PD +++S +S+C+ L+N+ G H YV + GF + I NAL+DMY KC +
Sbjct: 335 -VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDT 394
Query: 431 ARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHF 490
A IFD MS K V+ W S+++GY+ G++ A + F+ P +++V W +I+G VQ F
Sbjct: 395 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 454
Query: 491 DDAVALFREMQIQR-VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA 550
++A+ +F MQ Q V D T++++ + C LGAL+ KWI+ Y+++N I +DV +GT
Sbjct: 455 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 514
Query: 551 LIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPD 610
L++M+S+CG + ++ IF L ++D ++WT+ I +AM G A+ LF +M G KPD
Sbjct: 515 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 574
Query: 611 DITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELI 670
+ F+G L+ACSHGGLV++G+ F SM K+H + P+ HYGC++DLLGRAGLL+EA +LI
Sbjct: 575 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 634
Query: 671 QEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVD 730
+++P+E +++ + +LL+ACR+ NV+M A+K++ + + + LL+N+YAS
Sbjct: 635 EDMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 694
Query: 731 RWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVT 783
RW D KVR MKE G++K PG S I++ G HEF GD SHPEM I +ML+ V+
Sbjct: 695 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
HSP 2 Score: 248.8 bits (634), Expect = 2.0e-64
Identity = 157/521 (30.13%), Postives = 257/521 (49.33%), Query Frame = 1
Query: 163 PVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMA-FCADSSLG 222
P LL SK TK + L+NCK++D+LK + + GL+ D TI KL+A C +
Sbjct: 23 PSLLNQSKCTKATP-SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRE 82
Query: 223 NLRYAEKIF-NYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 282
+L +A+++F N + F+YN +++ YA G+ + +LLF ++ G+ PD +T+PF L
Sbjct: 83 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL 142
Query: 283 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 342
A R G ++ G IVK G D +V NSL+ Y E +++A+K+FDEM+ R+ V
Sbjct: 143 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 202
Query: 343 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 402
SW MI GY R +DA++ F M ++ P+ T+V +SAC L++LE G++++ +
Sbjct: 203 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 262
Query: 403 VRKE-LGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREA 462
+R + + +AL+DMY KC +++A+ +FDE N+ +M S Y+ G REA
Sbjct: 263 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 322
Query: 463 RDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQL 522
+ +F M V+PD+ ++++ ++ C+QL
Sbjct: 323 -------------------------------LGVFNLMMDSGVRPDRISMLSAISSCSQL 382
Query: 523 GALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSII 582
+ GK HGY+ N + ALI+MY KC D + IF + +K +W SI+
Sbjct: 383 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 442
Query: 583 CGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRI 642
G NG+ A F M + + +++ ++S G L EE F SM+ +
Sbjct: 443 AGYVENGEVDAAWETFETM----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 502
Query: 643 EPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPL 681
+ G G LD A+ + I ++ V L
Sbjct: 503 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
BLAST of Csa1G418260 vs. TrEMBL
Match:
F6HH61_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04660 PE=4 SV=1)
HSP 1 Score: 928.7 bits (2399), Expect = 4.8e-267
Identity = 452/662 (68.28%), Postives = 543/662 (82.02%), Query Frame = 1
Query: 139 MLPLSIIRRVQFISRHFSSSP-HLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIF 198
ML + + +F S HF S P HL S TKKSCI L+NCKSM LKQIQ+QI
Sbjct: 1 MLSQTKFQLFKFTSLHFLSKPLHLSTS----SHFTKKSCIFLLKNCKSMQHLKQIQTQIL 60
Query: 199 RIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKV 258
R G DT+NK M C D S+GNL YAE+IFNY+ P LF+YN+++K + K G RK
Sbjct: 61 RTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKA 120
Query: 259 LLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDM 318
+LLF+QLRE+GL PD FTYPFV KAIGCL +VR+GEKV GF+VK+G++ D YV NSL+DM
Sbjct: 121 VLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDM 180
Query: 319 YYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEAT 378
Y E+ V+N +++F+EM RD VSWNV+ISGYV+CRR+EDA++ FR MQQ+ + +P+EAT
Sbjct: 181 YAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEAT 240
Query: 379 VVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSM 438
VVSTLSAC ALK LELG EIH YVR++LGFT +I NAL+DMY KCG L+IAR IF++M +
Sbjct: 241 VVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPI 300
Query: 439 KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM 498
K VICWTSM+SGY+NCG L EAR+LF++SPVRDVVLWTAMINGYVQF+ FDDAVALFREM
Sbjct: 301 KTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREM 360
Query: 499 QIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCV 558
QI+RV PD+FT+V LLTGCAQLG LEQGKWIHGY+DEN+I +D VVGTALIEMY+KCG +
Sbjct: 361 QIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFI 420
Query: 559 DKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSAC 618
+KSLEIF L++KDTASWTSIICGLAMNGKTS+AL LF+EM + G KPDDITFIGVLSAC
Sbjct: 421 EKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSAC 480
Query: 619 SHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIV 678
SHGGLVEEGR+ F SM V++IEPK+EHYGC+IDLLGRAG LDEAEELI++ P N E++
Sbjct: 481 SHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVI 540
Query: 679 VPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRK 738
VPLYGALLSACR H NV+MGER+AK+L IES DSS+HTLLANIYAS DRWED KVRRK
Sbjct: 541 VPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRK 600
Query: 739 MKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQLLGLKESQVESVM 798
MK+LGVKK+PGCS +EV+GIVHEFLVGD SHPEM EI SML+ + LLGL E+++E +
Sbjct: 601 MKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPLLGLDENEMEGEI 658
Query: 799 PL 800
P+
Sbjct: 661 PV 658
BLAST of Csa1G418260 vs. TrEMBL
Match:
V4UPA8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007671mg PE=4 SV=1)
HSP 1 Score: 913.7 bits (2360), Expect = 1.6e-262
Identity = 448/658 (68.09%), Postives = 536/658 (81.46%), Query Frame = 1
Query: 137 SHMLPLSIIRRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQI 196
S LP S+ R++ + S S H S LTKKSCI L+NCKS+ QLKQIQ+QI
Sbjct: 3 SQRLPNSVSRQIIWKPVPQSDSSHT-------STLTKKSCIYLLKNCKSITQLKQIQAQI 62
Query: 197 FRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRK 256
F+IGL+ + +T+NKLM FC S GNL YAEKIF +Q P L YN+++K +AK+G RK
Sbjct: 63 FQIGLQQNPETLNKLMVFCTQPSHGNLLYAEKIFGSIQSPCLLAYNLLIKAFAKKGSFRK 122
Query: 257 VLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLID 316
LLLF +LRE G+ PD FTYPFV KA+GCL +V++GEKV G++VKTG++ D YV NS++D
Sbjct: 123 SLLLFSKLRERGVSPDNFTYPFVFKAVGCLGEVKKGEKVHGYVVKTGLEFDTYVCNSIMD 182
Query: 317 MYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEA 376
MY L + N KKLFDEM +D VSWNV ISG+V+C RFEDA++ FR M+Q N PDE
Sbjct: 183 MYAVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRMRQGCNLMPDEG 242
Query: 377 TVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMS 436
TVVSTLSACTALKNLELG EIH Y+ +EL FT + NALLDMY KCGCL+ AR +FDEM
Sbjct: 243 TVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCLSEARELFDEMP 302
Query: 437 MKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFRE 496
KNVICWTSM+SGY+NCG L +ARDLFD+SPVRD+VLWTAMINGYVQF+ FD+AVALFRE
Sbjct: 303 NKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFNRFDEAVALFRE 362
Query: 497 MQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGC 556
MQI R+KPDKF +V LLTGCAQLGALEQGKWIHGY++ENRIT+D VV TALIEMY+KCG
Sbjct: 363 MQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVATALIEMYAKCGL 422
Query: 557 VDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSA 616
++K+LEIFYEL +KD ASWTSIICGLAMNGK ++AL LFS+M GAKPDDITFIGVLSA
Sbjct: 423 IEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKPDDITFIGVLSA 482
Query: 617 CSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEI 676
CSHGGLV+EGRRFFN+M +V++I+PK+EHYGC+IDLLGRAGLLDEAEE I++IP EN EI
Sbjct: 483 CSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEWIRKIPNENNEI 542
Query: 677 VVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRR 736
+VPLYGALLSACRI+ NVDMGE+LA LE IES DSS HTLLANIYAS +RWED VR+
Sbjct: 543 IVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASANRWEDVTNVRQ 602
Query: 737 KMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQLLGLKESQVE 795
KMKE+GV+K+PGCS IE++GI+HEFLVGDPSH EM EI SML+R+ LL K++ +E
Sbjct: 603 KMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTLLDSKQNAME 653
BLAST of Csa1G418260 vs. TrEMBL
Match:
B9STP1_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0826200 PE=4 SV=1)
HSP 1 Score: 890.2 bits (2299), Expect = 1.9e-255
Identity = 431/639 (67.45%), Postives = 523/639 (81.85%), Query Frame = 1
Query: 171 LTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIF 230
L+++SCI L++CKSM LKQI +QIFR+GL D ++NKLMAFC D GNL YAEK+F
Sbjct: 35 LSQQSCISYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMF 94
Query: 231 NYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVR 290
Y++ P L +YN+++K +AK+G ++ L+LF +LREDGLWPD FTYPFV KAIG L +V
Sbjct: 95 KYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVS 154
Query: 291 QGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYV 350
+ EK+RG + KTG++ D YV NSLIDMY +L+ + K LFDEM RD +SWNVMISGYV
Sbjct: 155 KAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYV 214
Query: 351 RCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR 410
+CRRFEDAIN F MQ+E PDEATVVSTLSACTALK LELG +IH+YVR + FT
Sbjct: 215 KCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPI 274
Query: 411 IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRD 470
I NALLDMY KCGCL+IAR +F+EM KNVICWT+M+SGY NCG+L EAR+LF+ SP+RD
Sbjct: 275 IGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRD 334
Query: 471 VVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHG 530
VV+WTAMINGYVQF+ FD+AVALFREMQI++VKPDKF VV+LLTGCAQ GA+EQGKWIH
Sbjct: 335 VVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHE 394
Query: 531 YLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSE 590
++DENRI +D VVGTALIEMY+KCG ++K+LEIFY L KDTASWTSIICGLAMNGKTS+
Sbjct: 395 FIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSK 454
Query: 591 ALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVI 650
AL LFS+M++ G +PDDITFIGVLSACSHGGLVEEGR+FFNSM+ ++I+PKVEHYGC++
Sbjct: 455 ALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLV 514
Query: 651 DLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESC 710
DLLGRAGLL+EAEELI++IP EN I VPLYG+LLSACRI+ NV+MGER+AK+L ES
Sbjct: 515 DLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESS 574
Query: 711 DSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPE 770
DSS+HTLLANIYA DRWED KVRRKMK+LGVKK PGCS IEVD I+HEF G PSHPE
Sbjct: 575 DSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHPE 634
Query: 771 MMEICSMLNRVTGQLLGLKESQV--ESVMPLYKDTQHCN 808
M EI MLN + LLG ++++ E ++ + D Q C+
Sbjct: 635 MREIYYMLNIMAKPLLGSAKNEMEGEDLVGMTFDEQGCS 673
BLAST of Csa1G418260 vs. TrEMBL
Match:
A0A067GKX6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007077mg PE=4 SV=1)
HSP 1 Score: 884.4 bits (2284), Expect = 1.0e-253
Identity = 428/609 (70.28%), Postives = 510/609 (83.74%), Query Frame = 1
Query: 186 MDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMV 245
M QLKQIQ+QIF+IGL+ + +T+NKLM FC S GNL YAEKIF +Q P L YN+++
Sbjct: 1 MTQLKQIQAQIFQIGLQQNPETLNKLMVFCTHPSHGNLLYAEKIFGSIQSPCLLAYNLLI 60
Query: 246 KMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD 305
K +AK+G RK LLLF +LRE G+ PD FTYPFV KA+G L +V++GEKV G++VKTG++
Sbjct: 61 KAFAKKGSFRKSLLLFSKLRERGVSPDNFTYPFVFKAVGWLGEVKKGEKVHGYVVKTGLE 120
Query: 306 LDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREM 365
D YV NS++DMY L + N KKLFDEM +D VSWNV ISG+V+C RFEDA++ FR M
Sbjct: 121 FDTYVCNSIMDMYGVLGKICNVKKLFDEMPDKDVVSWNVSISGHVKCMRFEDAVDVFRRM 180
Query: 366 QQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCL 425
+Q N PDE TVVSTLSACTALKNLELG EIH Y+ +EL FT + NALLDMY KCGCL
Sbjct: 181 RQGCNLMPDEGTVVSTLSACTALKNLELGKEIHRYINQELEFTPIMGNALLDMYCKCGCL 240
Query: 426 NIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFH 485
+ AR +FDEM KNVICWTSM+SGY+NCG L +ARDLFD+SPVRD+VLWTAMINGYVQF+
Sbjct: 241 SEARELFDEMPNKNVICWTSMVSGYVNCGQLEKARDLFDRSPVRDIVLWTAMINGYVQFN 300
Query: 486 HFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGT 545
FD+AVALFREMQI R+KPDKF +V LLTGCAQLGALEQGKWIHGY++ENRIT+D VV T
Sbjct: 301 RFDEAVALFREMQIIRLKPDKFILVALLTGCAQLGALEQGKWIHGYINENRITVDAVVAT 360
Query: 546 ALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKP 605
ALIEMY+KCG ++K+LEIFYEL +KD ASWTSIICGLAMNGK ++AL LFS+M GAKP
Sbjct: 361 ALIEMYAKCGLIEKALEIFYELREKDAASWTSIICGLAMNGKINKALELFSQMISGGAKP 420
Query: 606 DDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEEL 665
DDITFIGVLSACSHGGLV+EGRRFFN+M +V++I+PK+EHYGC+IDLLGRAGLLDEAEEL
Sbjct: 421 DDITFIGVLSACSHGGLVDEGRRFFNTMTEVYQIQPKLEHYGCLIDLLGRAGLLDEAEEL 480
Query: 666 IQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASV 725
I++IP EN EI+VPLYGALLSACRI+ NVDMGE+LA LE IES DSS HTLLANIYAS
Sbjct: 481 IRKIPNENNEIIVPLYGALLSACRIYGNVDMGEKLAALLEKIESKDSSFHTLLANIYASA 540
Query: 726 DRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQL 785
+RWED VR+KMKE+GV+K+PGCS IE++GI+HEFLVGDPSH EM EI SML+R+ L
Sbjct: 541 NRWEDVTNVRQKMKEMGVRKVPGCSSIEINGIIHEFLVGDPSHSEMKEIYSMLDRMAKTL 600
Query: 786 LGLKESQVE 795
L K++ +E
Sbjct: 601 LDSKQNAME 609
BLAST of Csa1G418260 vs. TrEMBL
Match:
A0A118JW06_CYNCS (Pentatricopeptide repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_004112 PE=4 SV=1)
HSP 1 Score: 866.7 bits (2238), Expect = 2.3e-248
Identity = 413/630 (65.56%), Postives = 515/630 (81.75%), Query Frame = 1
Query: 151 ISRHFSS-SPHLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTIN 210
+SRHFS PH + TK++CI L+NCKSM+QLKQIQ+QIF +GL + D I
Sbjct: 9 LSRHFSLLRPHRFSTTQQFLIPTKRTCIHLLKNCKSMNQLKQIQTQIFVLGLAQNVDAIK 68
Query: 211 KLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGL 270
K+MAF AD S+GNL YA++IF+ ++ P LFVYNVM+K Y K G K L LF Q+R DGL
Sbjct: 69 KIMAFSADPSVGNLSYAQRIFDRIETPYLFVYNVMIKAYTKSGDFGKALCLFDQMRVDGL 128
Query: 271 WPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKK 330
WPD +TYPFV K+IGCLR+V GEK+ GF+VK+G + D YV NS++DMY EL E+ KK
Sbjct: 129 WPDNYTYPFVFKSIGCLREVLTGEKIHGFVVKSGAEFDCYVCNSVMDMYGELGRSEDMKK 188
Query: 331 LFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALK 390
+FDEM RD VSWNV+ISGYVRC++FEDA+ + +M++E + +PDEATVVSTLSAC ALK
Sbjct: 189 VFDEMPERDLVSWNVLISGYVRCKKFEDAVGVYLQMREEESVRPDEATVVSTLSACIALK 248
Query: 391 NLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISG 450
NLELG EIH+YV E+GFTT I NALLDMY+KCGCL++AR IFD + KNVICWTSM+SG
Sbjct: 249 NLELGKEIHHYVTHEIGFTTIIGNALLDMYSKCGCLDVAREIFDGLPKKNVICWTSMVSG 308
Query: 451 YINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTV 510
Y++CG L +AR LFD+SPV+D+VLWTAMINGYVQF++ D+A+ LF++MQ R+KPDKFTV
Sbjct: 309 YVSCGQLDDARLLFDRSPVKDIVLWTAMINGYVQFNNVDEAMVLFQQMQTYRIKPDKFTV 368
Query: 511 VTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELED 570
V LLTGCAQ+GALEQG+WIH Y++E+RI +D V GTALI+MY+KCG ++KSLE+FY L++
Sbjct: 369 VALLTGCAQVGALEQGEWIHEYMNEHRIIIDAVCGTALIDMYAKCGRIEKSLEVFYGLQE 428
Query: 571 KDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRF 630
KDTASWTSIIC L++NGK+ +AL+LFSEM+ G +PDDITFIGVL+ACSHGGLVEEGRR
Sbjct: 429 KDTASWTSIICALSLNGKSGKALQLFSEMKEYGFRPDDITFIGVLNACSHGGLVEEGRRH 488
Query: 631 FNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACR 690
F SMK V+ IEPK+EHYGC+IDLLGRAGLL EAE+++ +IP E EI+VP+YGALLSACR
Sbjct: 489 FESMKSVYEIEPKIEHYGCLIDLLGRAGLLKEAEKIVNKIPKEKDEILVPVYGALLSACR 548
Query: 691 IHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGC 750
++ +VDMGE LA +L IE DSSIHTL+ANIYAS RWED KKVR KM+ +GV+K PGC
Sbjct: 549 LYGDVDMGEHLADRLSEIEDGDSSIHTLMANIYASAGRWEDVKKVRSKMRAIGVRKEPGC 608
Query: 751 SLIEVDGIVHEFLVGDPSHPEMMEICSMLN 780
S IEV+G VHEFLVGD SHP+M+++ S LN
Sbjct: 609 SSIEVNGNVHEFLVGDASHPDMIDVYSSLN 638
BLAST of Csa1G418260 vs. TAIR10
Match:
AT1G31430.1 (AT1G31430.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 677.9 bits (1748), Expect = 7.5e-195
Identity = 331/565 (58.58%), Postives = 427/565 (75.58%), Query Frame = 1
Query: 233 VQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQG 292
+Q PSL +YN M+K A KVL LF +LR GL+PD FT P VLK+IG LR V +G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 293 EKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRC 352
EKV G+ VK G++ D+YV NSL+ MY L +E K+FDEM RD VSWN +IS YV
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 353 RRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRID 412
RFEDAI F+ M QE N K DE T+VSTLSAC+ALKNLE+G+ I+ +V E + RI
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 413 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 472
NAL+DM+ KCGCL+ AR +FD M KNV CWTSM+ GY++ G + EAR LF++SPV+DVV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 473 LWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 532
LWTAM+NGYVQF+ FD+A+ LFR MQ ++PD F +V+LLTGCAQ GALEQGKWIHGY+
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 533 DENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEAL 592
+ENR+T+D VVGTAL++MY+KCGC++ +LE+FYE++++DTASWTS+I GLAMNG + AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 593 RLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDL 652
L+ EME VG + D ITF+ VL+AC+HGG V EGR+ F+SM + H ++PK EH C+IDL
Sbjct: 366 DLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDL 425
Query: 653 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS 712
L RAGLLDEAEELI ++ E+ E +VP+Y +LLSA R + NV + ER+A+KLE +E DS
Sbjct: 426 LCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDS 485
Query: 713 SIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDP--SHPE 772
S HTLLA++YAS +RWED VRRKMK+LG++K PGCS IE+DG+ HEF+VGD SHP+
Sbjct: 486 SAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPK 545
Query: 773 MMEICSMLNRVTGQLLGLKESQVES 796
M EI SML++ T +L L+ +++S
Sbjct: 546 MDEINSMLHQTTNLMLDLEHKEIDS 570
BLAST of Csa1G418260 vs. TAIR10
Match:
AT2G22410.1 (AT2G22410.1 SLOW GROWTH 1)
HSP 1 Score: 512.7 bits (1319), Expect = 4.2e-145
Identity = 258/607 (42.50%), Postives = 397/607 (65.40%), Query Frame = 1
Query: 177 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 236
+ L CK + LKQIQ+Q+ GL D ++L+AFCA S L Y+ KI +++P
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 237 SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLW---PDGFTYPFVLKAIGCLRDVRQGE 296
++F +NV ++ +++ ++ LL++Q+ G PD FTYP + K LR G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 297 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 356
+ G ++K ++L ++V+N+ I M+ ++ENA+K+FDE RD VSWN +I+GY +
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 357 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRID 416
E AI ++ M+ EG KPD+ T++ +S+C+ L +L G E + YV++ L T +
Sbjct: 237 EAEKAIYVYKLMESEG-VKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 296
Query: 417 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 476
NAL+DM++KCG ++ AR IFD + + ++ WT+MISGY CG L +R LFD +DVV
Sbjct: 297 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 356
Query: 477 LWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 536
LW AMI G VQ DA+ALF+EMQ KPD+ T++ L+ C+QLGAL+ G WIH Y+
Sbjct: 357 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 416
Query: 537 DENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEAL 596
++ ++++V +GT+L++MY+KCG + ++L +F+ ++ +++ ++T+II GLA++G S A+
Sbjct: 417 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 476
Query: 597 RLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDL 656
F+EM G PD+ITFIG+LSAC HGG+++ GR +F+ MK + P+++HY ++DL
Sbjct: 477 SYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDL 536
Query: 657 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS 716
LGRAGLL+EA+ L++ +P+E V +GALL CR+H NV++GE+ AKKL ++ DS
Sbjct: 537 LGRAGLLEEADRLMESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDS 596
Query: 717 SIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMM 776
I+ LL +Y + WEDAK+ RR M E GV+K+PGCS IEV+GIV EF+V D S PE
Sbjct: 597 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 656
Query: 777 EICSMLN 780
+I L+
Sbjct: 657 KIYDRLH 659
BLAST of Csa1G418260 vs. TAIR10
Match:
AT3G15930.1 (AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 497.3 bits (1279), Expect = 1.8e-140
Identity = 252/609 (41.38%), Postives = 397/609 (65.19%), Query Frame = 1
Query: 177 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 236
I L CK+ DQ KQ+ SQ G+ + KL F G++ YA K+F + +P
Sbjct: 38 ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97
Query: 237 SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRD---VRQGE 296
+ V+N M+K ++K + + L+ + ++G+ PD T+PF+L G RD + G+
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN--GLKRDGGALACGK 157
Query: 297 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 356
K+ +VK G+ + YV N+L+ MY ++ A+ +FD D SWN+MISGY R +
Sbjct: 158 KLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMK 217
Query: 357 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRID 416
+E++I EM++ P T++ LSAC+ +K+ +L +H YV + + + R++
Sbjct: 218 EYEESIELLVEMERN-LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 277
Query: 417 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 476
NAL++ YA CG ++IA IF M ++VI WTS++ GY+ G+L+ AR FD+ PVRD +
Sbjct: 278 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 337
Query: 477 LWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 536
WT MI+GY++ F++++ +FREMQ + PD+FT+V++LT CA LG+LE G+WI Y+
Sbjct: 338 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 397
Query: 537 DENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEAL 596
D+N+I DVVVG ALI+MY KCGC +K+ ++F++++ +D +WT+++ GLA NG+ EA+
Sbjct: 398 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 457
Query: 597 RLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDL 656
++F +M+ + +PDDIT++GVLSAC+H G+V++ R+FF M+ HRIEP + HYGC++D+
Sbjct: 458 KVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM 517
Query: 657 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS 716
LGRAGL+ EA E+++++P+ IV +GALL A R+HN+ M E AKK+ +E +
Sbjct: 518 LGRAGLVKEAYEILRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNG 577
Query: 717 SIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMM 776
+++ LL NIYA RW+D ++VRRK+ ++ +KK PG SLIEV+G HEF+ GD SH +
Sbjct: 578 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 637
Query: 777 EICSMLNRV 782
EI L +
Sbjct: 638 EIYMKLEEL 640
BLAST of Csa1G418260 vs. TAIR10
Match:
AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 456.4 bits (1173), Expect = 3.6e-128
Identity = 228/612 (37.25%), Postives = 374/612 (61.11%), Query Frame = 1
Query: 177 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 236
I + C S+ QLKQ + R G D + +KL A A SS +L YA K+F+ + P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 237 SLFVYNVMVKMYAKR-GILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKV 296
+ F +N +++ YA + + + E +P+ +T+PF++KA + + G+ +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 297 RGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRF 356
G VK+ + D +V NSLI Y+ ++++A K+F + +D VSWN MI+G+V+
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 357 EDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNA 416
+ A+ F++M+ E + K T+V LSAC ++NLE G ++ +Y+ + + + NA
Sbjct: 214 DKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 273
Query: 417 LLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLW 476
+LDMY KCG + A+ +FD M K+ + WT+M+ GY D AR++ + P +D+V W
Sbjct: 274 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 333
Query: 477 TAMINGYVQFHHFDDAVALFREMQIQR-VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLD 536
A+I+ Y Q ++A+ +F E+Q+Q+ +K ++ T+V+ L+ CAQ+GALE G+WIH Y+
Sbjct: 334 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 393
Query: 537 ENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALR 596
++ I M+ V +ALI MYSKCG ++KS E+F +E +D W+++I GLAM+G +EA+
Sbjct: 394 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 453
Query: 597 LFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLL 656
+F +M+ KP+ +TF V ACSH GLV+E F+ M+ + I P+ +HY C++D+L
Sbjct: 454 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 513
Query: 657 GRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSS 716
GR+G L++A + I+ +PI V +GALL AC+IH N+++ E +L +E +
Sbjct: 514 GRSGYLEKAVKFIEAMPIPPSTSV---WGALLGACKIHANLNLAEMACTRLLELEPRNDG 573
Query: 717 IHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMME 776
H LL+NIYA + +WE+ ++R+ M+ G+KK PGCS IE+DG++HEFL GD +HP +
Sbjct: 574 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 633
Query: 777 ICSMLNRVTGQL 786
+ L+ V +L
Sbjct: 634 VYGKLHEVMEKL 641
HSP 2 Score: 146.0 bits (367), Expect = 1.0e-34
Identity = 140/550 (25.45%), Postives = 244/550 (44.36%), Query Frame = 1
Query: 219 SLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPF 278
S G+L A K+F +++ + +N M+ + ++G K L LF+++ + + T
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 279 VLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRD 338
VL A +R++ G +V +I + ++++ + N+++DMY + ++E+AK+LFD M +D
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 339 SVSWNVMISGYVRCRRFEDAINTFREMQQ-------------EGNEKPDEA--------- 398
+V+W M+ GY +E A M Q E N KP+EA
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 399 ---------TVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNALLDMYAKCGCLN 458
T+VSTLSAC + LELG IH+Y++K + + +AL+ MY+KCG L
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 459 IARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDV----VLWTAMINGYV 518
+R +F+ + ++V W++MI G G EA D+F K +V V +T +
Sbjct: 418 KSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 519 QFHHFDDAVALFREMQIQ-RVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDV 578
D+A +LF +M+ + P++ ++ + G LE+ +++ I
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV---KFIEAMPIPPST 537
Query: 579 VVGTALI---EMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEM 638
V AL+ ++++ + + ELE ++ + + A GK L M
Sbjct: 538 SVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHM 597
Query: 639 ERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGC---VIDLLGR 698
G K + S+ G++ E F S H + KV YG V++ L
Sbjct: 598 RVTGLKKEP-----GCSSIEIDGMIHE----FLSGDNAHPMSEKV--YGKLHEVMEKLKS 657
Query: 699 AGLLDEAEELIQEIPIENC-EIVVPLYGALLSAC--RIHNNVDMGERLAKKLENIESCDS 723
G E +++Q I E E + L+ L+ C I R+ K L C
Sbjct: 658 NGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDC-H 712
BLAST of Csa1G418260 vs. TAIR10
Match:
AT3G22690.1 (AT3G22690.1 Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))
HSP 1 Score: 436.4 bits (1121), Expect = 3.8e-122
Identity = 228/596 (38.26%), Postives = 365/596 (61.24%), Query Frame = 1
Query: 191 QIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAK 250
QI I ++G D N L+ F A+ G L A K+F+ + + ++ + M+ YA+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAEC--GELDSARKVFDEMSERNVVSWTSMICGYAR 214
Query: 251 RGILRKVL-LLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNY 310
R + + L F+ +R++ + P+ T V+ A L D+ GEKV FI +G+++++
Sbjct: 215 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 274
Query: 311 VYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEG 370
+ ++L+DMY + + ++ AK+LFDE + N M S YVR +A+ F M G
Sbjct: 275 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 334
Query: 371 NEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTT--RIDNALLDMYAKCGCLNI 430
+PD +++S +S+C+ L+N+ G H YV + GF + I NAL+DMY KC +
Sbjct: 335 -VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDT 394
Query: 431 ARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHF 490
A IFD MS K V+ W S+++GY+ G++ A + F+ P +++V W +I+G VQ F
Sbjct: 395 AFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLF 454
Query: 491 DDAVALFREMQIQR-VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA 550
++A+ +F MQ Q V D T++++ + C LGAL+ KWI+ Y+++N I +DV +GT
Sbjct: 455 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 514
Query: 551 LIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPD 610
L++M+S+CG + ++ IF L ++D ++WT+ I +AM G A+ LF +M G KPD
Sbjct: 515 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 574
Query: 611 DITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELI 670
+ F+G L+ACSHGGLV++G+ F SM K+H + P+ HYGC++DLLGRAGLL+EA +LI
Sbjct: 575 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 634
Query: 671 QEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVD 730
+++P+E +++ + +LL+ACR+ NV+M A+K++ + + + LL+N+YAS
Sbjct: 635 EDMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 694
Query: 731 RWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVT 783
RW D KVR MKE G++K PG S I++ G HEF GD SHPEM I +ML+ V+
Sbjct: 695 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
HSP 2 Score: 248.8 bits (634), Expect = 1.1e-65
Identity = 157/521 (30.13%), Postives = 257/521 (49.33%), Query Frame = 1
Query: 163 PVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMA-FCADSSLG 222
P LL SK TK + L+NCK++D+LK + + GL+ D TI KL+A C +
Sbjct: 23 PSLLNQSKCTKATP-SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRE 82
Query: 223 NLRYAEKIF-NYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 282
+L +A+++F N + F+YN +++ YA G+ + +LLF ++ G+ PD +T+PF L
Sbjct: 83 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL 142
Query: 283 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 342
A R G ++ G IVK G D +V NSL+ Y E +++A+K+FDEM+ R+ V
Sbjct: 143 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 202
Query: 343 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 402
SW MI GY R +DA++ F M ++ P+ T+V +SAC L++LE G++++ +
Sbjct: 203 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 262
Query: 403 VRKE-LGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREA 462
+R + + +AL+DMY KC +++A+ +FDE N+ +M S Y+ G REA
Sbjct: 263 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 322
Query: 463 RDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQL 522
+ +F M V+PD+ ++++ ++ C+QL
Sbjct: 323 -------------------------------LGVFNLMMDSGVRPDRISMLSAISSCSQL 382
Query: 523 GALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSII 582
+ GK HGY+ N + ALI+MY KC D + IF + +K +W SI+
Sbjct: 383 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 442
Query: 583 CGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRI 642
G NG+ A F M + + +++ ++S G L EE F SM+ +
Sbjct: 443 AGYVENGEVDAAWETFETM----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 502
Query: 643 EPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPL 681
+ G G LD A+ + I ++ V L
Sbjct: 503 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
BLAST of Csa1G418260 vs. NCBI nr
Match:
gi|700210313|gb|KGN65409.1| (hypothetical protein Csa_1G418260 [Cucumis sativus])
HSP 1 Score: 1650.6 bits (4273), Expect = 0.0e+00
Identity = 811/811 (100.00%), Postives = 811/811 (100.00%), Query Frame = 1
Query: 1 MDKKRVAIPLVCHGHSRPIVDLFSSLVTPDGFFLVSASKDSNPMLRNGENGDWIGTFEGH 60
MDKKRVAIPLVCHGHSRPIVDLFSSLVTPDGFFLVSASKDSNPMLRNGENGDWIGTFEGH
Sbjct: 1 MDKKRVAIPLVCHGHSRPIVDLFSSLVTPDGFFLVSASKDSNPMLRNGENGDWIGTFEGH 60
Query: 61 KGAVWSCCLDTNALRAATGSADFSATHCGLFPFPQAFASSRLHHLLTPHPFLGHMKHFDC 120
KGAVWSCCLDTNALRAATGSADFSATHCGLFPFPQAFASSRLHHLLTPHPFLGHMKHFDC
Sbjct: 61 KGAVWSCCLDTNALRAATGSADFSATHCGLFPFPQAFASSRLHHLLTPHPFLGHMKHFDC 120
Query: 121 AFAFSEIFQFFKHSQSSHMLPLSIIRRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECL 180
AFAFSEIFQFFKHSQSSHMLPLSIIRRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECL
Sbjct: 121 AFAFSEIFQFFKHSQSSHMLPLSIIRRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECL 180
Query: 181 RNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFV 240
RNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFV
Sbjct: 181 RNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFV 240
Query: 241 YNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 300
YNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV
Sbjct: 241 YNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 300
Query: 301 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 360
KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN
Sbjct: 301 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 360
Query: 361 TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYA 420
TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYA
Sbjct: 361 TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYA 420
Query: 421 KCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMING 480
KCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMING
Sbjct: 421 KCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMING 480
Query: 481 YVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMD 540
YVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMD
Sbjct: 481 YVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMD 540
Query: 541 VVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMER 600
VVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMER
Sbjct: 541 VVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMER 600
Query: 601 VGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLD 660
VGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLD
Sbjct: 601 VGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLD 660
Query: 661 EAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLAN 720
EAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLAN
Sbjct: 661 EAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLAN 720
Query: 721 IYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNR 780
IYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNR
Sbjct: 721 IYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNR 780
Query: 781 VTGQLLGLKESQVESVMPLYKDTQHCNFVES 812
VTGQLLGLKESQVESVMPLYKDTQHCNFVES
Sbjct: 781 VTGQLLGLKESQVESVMPLYKDTQHCNFVES 811
BLAST of Csa1G418260 vs. NCBI nr
Match:
gi|659130070|ref|XP_008464984.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g31430 [Cucumis melo])
HSP 1 Score: 1243.4 bits (3216), Expect = 0.0e+00
Identity = 622/673 (92.42%), Postives = 639/673 (94.95%), Query Frame = 1
Query: 139 MLPLSIIRRVQFISRHFSSSPHLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFR 198
MLPLSIIRRVQFISRHFSSSPHLV V +RISK TKKSCIE LRNCKSM+QLK+IQSQIFR
Sbjct: 1 MLPLSIIRRVQFISRHFSSSPHLVTVPIRISKPTKKSCIEYLRNCKSMEQLKRIQSQIFR 60
Query: 199 IGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVL 258
IGLEGDRD INKLMAFCAD SLGNLRYAEKIF+YVQDPSLFVYNVMVKMYAKRG+LRKVL
Sbjct: 61 IGLEGDRDIINKLMAFCADLSLGNLRYAEKIFDYVQDPSLFVYNVMVKMYAKRGLLRKVL 120
Query: 259 LLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMY 318
LLFQQLRED LWPD FTYPFVLKAIGCLRDV QGEK+ GF+VKTGM+LDNYV NSL+DMY
Sbjct: 121 LLFQQLREDQLWPDNFTYPFVLKAIGCLRDVGQGEKLHGFVVKTGMNLDNYVCNSLMDMY 180
Query: 319 YELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATV 378
EL NVENAKKLFDEMTTRDSVSWNVMISGYV CRRFEDAINTFREMQQEGNEKPDEATV
Sbjct: 181 SELGNVENAKKLFDEMTTRDSVSWNVMISGYVGCRRFEDAINTFREMQQEGNEKPDEATV 240
Query: 379 VSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMK 438
VSTLSACTALKNLELGDEIHNYVRKELGFT RIDNALLDMYAKCGCLNI+RNIFDEM MK
Sbjct: 241 VSTLSACTALKNLELGDEIHNYVRKELGFTPRIDNALLDMYAKCGCLNISRNIFDEMPMK 300
Query: 439 NVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQ 498
NVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQ
Sbjct: 301 NVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQ 360
Query: 499 IQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVD 558
IQ+VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRIT+DVVVGTALIEMYSKCGCVD
Sbjct: 361 IQKVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITIDVVVGTALIEMYSKCGCVD 420
Query: 559 KSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACS 618
KSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEME VGAKPDDITFIGVLSACS
Sbjct: 421 KSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMELVGAKPDDITFIGVLSACS 480
Query: 619 HGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVV 678
HGGLVEEGRRFFNSMKKV+RIEPKVEHYGCV+DLLGRAGLLDEAEELIQEI IENCEIVV
Sbjct: 481 HGGLVEEGRRFFNSMKKVYRIEPKVEHYGCVVDLLGRAGLLDEAEELIQEISIENCEIVV 540
Query: 679 PLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKM 738
LYGALLSACRIHNNVDMGERLAKKL NIE CDSSIH LLANIYAS DRWEDAKKVRRKM
Sbjct: 541 SLYGALLSACRIHNNVDMGERLAKKLVNIEPCDSSIHALLANIYASADRWEDAKKVRRKM 600
Query: 739 KELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQLLGLKESQVESVMP 798
KELGVKKMPGCS IEVDGIVHEFLVGDPSHPE +EI SMLNRV+ QLLGLKESQ +M
Sbjct: 601 KELGVKKMPGCSSIEVDGIVHEFLVGDPSHPETIEIRSMLNRVSRQLLGLKESQ---LMS 660
Query: 799 LYKDTQHCNFVES 812
DTQHCNFVES
Sbjct: 661 FDNDTQHCNFVES 670
BLAST of Csa1G418260 vs. NCBI nr
Match:
gi|359484390|ref|XP_002281719.2| (PREDICTED: pentatricopeptide repeat-containing protein At1g31430 [Vitis vinifera])
HSP 1 Score: 928.7 bits (2399), Expect = 6.9e-267
Identity = 452/662 (68.28%), Postives = 543/662 (82.02%), Query Frame = 1
Query: 139 MLPLSIIRRVQFISRHFSSSP-HLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIF 198
ML + + +F S HF S P HL S TKKSCI L+NCKSM LKQIQ+QI
Sbjct: 1 MLSQTKFQLFKFTSLHFLSKPLHLSTS----SHFTKKSCIFLLKNCKSMQHLKQIQTQIL 60
Query: 199 RIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKV 258
R G DT+NK M C D S+GNL YAE+IFNY+ P LF+YN+++K + K G RK
Sbjct: 61 RTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKA 120
Query: 259 LLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDM 318
+LLF+QLRE+GL PD FTYPFV KAIGCL +VR+GEKV GF+VK+G++ D YV NSL+DM
Sbjct: 121 VLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDM 180
Query: 319 YYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEAT 378
Y E+ V+N +++F+EM RD VSWNV+ISGYV+CRR+EDA++ FR MQQ+ + +P+EAT
Sbjct: 181 YAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEAT 240
Query: 379 VVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSM 438
VVSTLSAC ALK LELG EIH YVR++LGFT +I NAL+DMY KCG L+IAR IF++M +
Sbjct: 241 VVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPI 300
Query: 439 KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM 498
K VICWTSM+SGY+NCG L EAR+LF++SPVRDVVLWTAMINGYVQF+ FDDAVALFREM
Sbjct: 301 KTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREM 360
Query: 499 QIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCV 558
QI+RV PD+FT+V LLTGCAQLG LEQGKWIHGY+DEN+I +D VVGTALIEMY+KCG +
Sbjct: 361 QIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFI 420
Query: 559 DKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSAC 618
+KSLEIF L++KDTASWTSIICGLAMNGKTS+AL LF+EM + G KPDDITFIGVLSAC
Sbjct: 421 EKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSAC 480
Query: 619 SHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIV 678
SHGGLVEEGR+ F SM V++IEPK+EHYGC+IDLLGRAG LDEAEELI++ P N E++
Sbjct: 481 SHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVI 540
Query: 679 VPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRK 738
VPLYGALLSACR H NV+MGER+AK+L IES DSS+HTLLANIYAS DRWED KVRRK
Sbjct: 541 VPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRK 600
Query: 739 MKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQLLGLKESQVESVM 798
MK+LGVKK+PGCS +EV+GIVHEFLVGD SHPEM EI SML+ + LLGL E+++E +
Sbjct: 601 MKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKPLLGLDENEMEGEI 658
Query: 799 PL 800
P+
Sbjct: 661 PV 658
BLAST of Csa1G418260 vs. NCBI nr
Match:
gi|1009160176|ref|XP_015898211.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g31430 [Ziziphus jujuba])
HSP 1 Score: 922.5 bits (2383), Expect = 5.0e-265
Identity = 452/640 (70.62%), Postives = 529/640 (82.66%), Query Frame = 1
Query: 151 ISRHFSSSPHLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINK 210
I R F S+P + S LT +SCI+ L+ CK+M QLKQIQ+QIF GL R +NK
Sbjct: 13 IFRGFFSTPLVFTKFSGKSILTGESCIQYLQRCKTMRQLKQIQTQIFMAGLHQSRGHLNK 72
Query: 211 LMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLW 270
LM FC SLGN++YAEKIF Y+QDP LFVYNVMVK +AK G RK + LF +LRE GLW
Sbjct: 73 LMIFCTHPSLGNMQYAEKIFGYIQDPCLFVYNVMVKAFAKLGSFRKTIFLFWRLREGGLW 132
Query: 271 PDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKL 330
PD +TYPFVLKAIGCL ++R+GEK GF++KTG++ D YV NSLIDMY +L VE +KL
Sbjct: 133 PDNYTYPFVLKAIGCLGEIREGEKAHGFVIKTGLEFDTYVCNSLIDMYSQLGKVEYFRKL 192
Query: 331 FDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKN 390
F+EM RDSVSWNV ISGYVRCRRF+DA+N FR M EGNEKPDEAT+VSTL ACTALK
Sbjct: 193 FEEMPERDSVSWNVTISGYVRCRRFDDALNVFRRMAAEGNEKPDEATIVSTLPACTALKK 252
Query: 391 LELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGY 450
LELG EIH+YVR EL TT I NALLDMYAKCGCL AR IFDEM KNVICWTSM+SGY
Sbjct: 253 LELGREIHDYVRSELELTTIISNALLDMYAKCGCLGEARKIFDEMPTKNVICWTSMVSGY 312
Query: 451 INCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVV 510
+NCG L EAR+LF++ PVRDVVLWTAMINGYVQ++ DDAVALF+EMQ +RV+ DKFTVV
Sbjct: 313 VNCGKLDEARELFERVPVRDVVLWTAMINGYVQYNSVDDAVALFQEMQTRRVRADKFTVV 372
Query: 511 TLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDK 570
+LLTGCAQLGALEQGKWIHGY++E I MD VVGTALIEMY+KCG +DKSL+IF L++K
Sbjct: 373 SLLTGCAQLGALEQGKWIHGYIEECGIKMDAVVGTALIEMYAKCGSIDKSLDIFNRLKEK 432
Query: 571 DTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFF 630
DTASWTSIICGLAMNGKTS+AL +FS+M+++G +PDDITF+GVLSACSHGGLVEEGR+FF
Sbjct: 433 DTASWTSIICGLAMNGKTSKALEMFSKMKQLGIQPDDITFVGVLSACSHGGLVEEGRQFF 492
Query: 631 NSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRI 690
SM++++ IEPK+EHYGC+IDLL RAGLLDEAEELI+++P EIVVPLYGALLSACRI
Sbjct: 493 CSMREMYDIEPKLEHYGCLIDLLSRAGLLDEAEELIEKVPDNKNEIVVPLYGALLSACRI 552
Query: 691 HNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCS 750
+ NV MGER+A+KLEN ES DSS+H LLANIYAS DRW D KKVRRKMK+LGV+K+PGCS
Sbjct: 553 YGNVTMGERVAEKLENFESSDSSVHMLLANIYASADRWGDVKKVRRKMKDLGVRKVPGCS 612
Query: 751 LIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQLLGLKE 791
IEV+G VHEFLVGD SHPEM EI S+L R+ L G ++
Sbjct: 613 SIEVNGTVHEFLVGDASHPEMTEITSLLCRMIKPLSGSED 652
BLAST of Csa1G418260 vs. NCBI nr
Match:
gi|719988634|ref|XP_010252400.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g31430 [Nelumbo nucifera])
HSP 1 Score: 914.4 bits (2362), Expect = 1.4e-262
Identity = 430/628 (68.47%), Postives = 536/628 (85.35%), Query Frame = 1
Query: 167 RISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYA 226
+ +LTKK C+ L+NCKSM +LKQIQSQIFR+GL +RD +NKLM FC D + GNLRYA
Sbjct: 25 KTGRLTKKECLLYLQNCKSMKELKQIQSQIFRVGLHQNRDALNKLMVFCTDPNSGNLRYA 84
Query: 227 EKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCL 286
E+IF+Y+Q+P LF++N+M+K +AK+G RKVLLLF +LRED L PD FTYPFVLKAIGCL
Sbjct: 85 ERIFSYIQEPCLFIFNLMIKTFAKKGNFRKVLLLFNRLREDDLSPDNFTYPFVLKAIGCL 144
Query: 287 RDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMI 346
R V +G + GFIVKTG + D+YV NSL+DMY E+ ++E ++LF+EM+ RD++SWNV+I
Sbjct: 145 RAVSEGRNIHGFIVKTGFEFDSYVRNSLMDMYAEMGDMETLRRLFEEMSQRDAISWNVLI 204
Query: 347 SGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELG 406
SGYV+ RF+DA++ F++M+Q+ +PDEATVVSTLSAC AL N+ELG EIH Y+ +EL
Sbjct: 205 SGYVKSGRFDDALSVFQQMKQQSFVRPDEATVVSTLSACVALGNVELGKEIHLYIDRELE 264
Query: 407 FTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKS 466
FTT I NALLDMY+KCG L++AR IFDEM KNVI WTSM+SGY+NCG L EAR+LFD++
Sbjct: 265 FTTVIRNALLDMYSKCGYLSLARQIFDEMPDKNVISWTSMVSGYVNCGQLDEARELFDRT 324
Query: 467 PVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGK 526
PVRDV+LWTAMINGYVQ++ FD A+ LFREMQ++RVKPDKFT+V LLTGCAQLGALEQGK
Sbjct: 325 PVRDVILWTAMINGYVQYNQFDKALTLFREMQMKRVKPDKFTLVALLTGCAQLGALEQGK 384
Query: 527 WIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNG 586
WIHGY+DEN +T+D +VGTALI+MY+KCGC++KS+EIF +E+KD ASWT+IICGLAMNG
Sbjct: 385 WIHGYIDENMVTIDAIVGTALIDMYAKCGCIEKSIEIFKRIEEKDRASWTAIICGLAMNG 444
Query: 587 KTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHY 646
+T++AL LFSEM+ VG KPDDITFIGVLSACSHGGLVEEGRR F+SM+K+++IEPK+EHY
Sbjct: 445 QTTKALELFSEMKLVGVKPDDITFIGVLSACSHGGLVEEGRRHFDSMRKLYQIEPKLEHY 504
Query: 647 GCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLEN 706
GC IDLLGRAGLL+EAEE I++IP +N IVVPL+GALL ACRIH NV+MGER+A+ L+
Sbjct: 505 GCFIDLLGRAGLLNEAEEFIEKIPSDNIGIVVPLWGALLGACRIHGNVEMGERVARHLDG 564
Query: 707 IESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDP 766
IES +S +HTLLANIYA+ DRWED KVR+KMKELG+KK+PGCSLIEV+GIVHEFLVGD
Sbjct: 565 IESNNSGVHTLLANIYAAADRWEDVTKVRKKMKELGIKKVPGCSLIEVNGIVHEFLVGDT 624
Query: 767 SHPEMMEICSMLNRVTGQLLGLKESQVE 795
SH EM EICS L+ + L GL+E+ ++
Sbjct: 625 SHEEMKEICSTLHHMAKLLQGLEENMID 652
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PPR65_ARATH | 1.3e-193 | 58.58 | Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN... | [more] |
PP169_ARATH | 7.4e-144 | 42.50 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
PP235_ARATH | 3.2e-139 | 41.38 | Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... | [more] |
PP175_ARATH | 6.3e-127 | 37.25 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
PP249_ARATH | 6.8e-121 | 38.26 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN... | [more] |
Match Name | E-value | Identity | Description | |
F6HH61_VITVI | 4.8e-267 | 68.28 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g04660 PE=4 SV=... | [more] |
V4UPA8_9ROSI | 1.6e-262 | 68.09 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007671mg PE=4 SV=1 | [more] |
B9STP1_RICCO | 1.9e-255 | 67.45 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
A0A067GKX6_CITSI | 1.0e-253 | 70.28 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007077mg PE=4 SV=1 | [more] |
A0A118JW06_CYNCS | 2.3e-248 | 65.56 | Pentatricopeptide repeat-containing protein OS=Cynara cardunculus var. scolymus ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G31430.1 | 7.5e-195 | 58.58 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT2G22410.1 | 4.2e-145 | 42.50 | SLOW GROWTH 1 | [more] |
AT3G15930.1 | 1.8e-140 | 41.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G29760.1 | 3.6e-128 | 37.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.1 | 3.8e-122 | 38.26 | Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatrico... | [more] |