Csa1G256200 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAACGACTAATCCAACGGTCACGATTTCATCTCTCTCAATTGGAGACTTGGGCCTCTGAAAAGCCTACAGGAATATTATAGCCGATCACTTCGTCGTCTACAACGTCTTCAGAGACGGAACATTCACAACTGTGTGTGAAACCAAAAATAGGGAAACGCCGGTGCAGCGATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCCGGAGCTTCCAAGACTTTTCCTCAGCAGGCTGGAGCCATTCGCAAAAATGGCTACATCGTAATCAAGAACAGACCCTGCAAGGTGTCCAACTTCTTTTTTCTTTTTTCTTTCTTTATTCTTTTGAATCATGAAAGTGGGTTGTTCTTTATATTTTCTCTGAAAGGGTATTCGTTCGGTTGTTTGCTAATTTTGTTGGTTCTATTTCTAAGTGAACATGGTCCTTAACTTTTAACTCTGTGACTACTGATTATGGTAATTGTTACTGTTATTCATGGTTTCTCTGATTCACTTAAGTTTCCCCCTTACTTTCTCTTTGGTTGGACCTTGTGCTTTCGGGGTATTTAAAGTTTGATGAATTGAGAGAAAGATTTGTCGTCGTACACAACTATAGTGGGTGAAACTCTTTTTCTTGAAACGAAGGGATTTTTGGTTATAAGAGGAAGACTGGGACCGTTTACTTATGTATTATGTGTTATCCGCTTCAAGGTTAGCGTAGTTCAACTTACATGACATTAGGTTTGAATCCTTCACCTATGTTGAACAATTTCAGTGGGTTGAAGAGGTTGTGCAAGATCTGATTTAACTGCAAGGCTATGAAATTTCAGGGTTAATGGTTGATTATCTATAATGGCGTTGGCAAGTAATTATTTCACCCAATTTGGATTGGTTTGTCTCAAATGTAGCTTGAGCGTGCATTTTATTTAGTAAATTTTTTGAGCTGGACTTGGCCTAAGAGGTGGATGCCAGGCTAAAATGCTAATAGTGGATATATTTCTCATGCTGCATTTGTCTTTTGTGAGAGTACTAACTAGTAGGGATATATATATTGGTAATATTAGTATGGTAGTAGTTGGGACATATGAGTATTAACTAGTGTTGTTTGGATATAAATGACAGGAGTTGGGCATCTTAGAGGGGGATGGATCATTTTGTTGAGAGTTTCCATTGTAGGACTTTGATAGAGAGAGATAACCCTATTGAAAGGCTATTGGTATATTGCAACTTCTCTTGATATTGCAATATATTACTATCTTTGAATTTTATGTTGTAACGAAATGTCTTTGAAGCATTAGCAAAGCTTTTCTTTTCAAGAAAGAACTATGCTATTGCATGTCATCTTTTTTGTGTGATCACATGATACAATGTCCATGGTTATAGTTCCATTTGCCATGGGGGACTCGGCATTCCTTTTGTAGTCTTCTTTGGGCAGTGCTATAAGAACAGTTACATGCCCGAAGAAGATTAAATTTCTTCTTTGGGAACTTTTATACGAAGCTTTCGACACCAAGGATCTCCTTCAAAGACACACGCCATTCATGGAAATTTCACCCAGTTGGTGCACGTTGTGTAAACTGGATGATGAATTTCAAAACTTCATTTTCATTCACGTTTGTTTTCTTGTTATTTTTGGAGCAGAGTGCATAAAGCTTTTGGGTGGTCTCCTGTTCTTCCTACGGATGTTAAGGGTTTCCTGATCATTATCCTAGTGAGCCACCCCTTTTGGAGAGCCAAAGCATTGCTGTGGATGCATGTATCTGTGGCCTTCTTTTGGGTTCCATGGAAGGATAGAAATCAAAGAGTCTTTTTGGATAAAGAGCACCCGTTTGAAGTGTTTTTTGACCTCGTTATTTATTATGCTATTTCTTGATGTAAATTGTCTAATCTATTTGCTTTGTATGGCTACGCTTCCCTTTTAATCTACCGAGAAAGCCTTTTATAATCCTCATGAAGCCTTTTATAATCCTCATGGATTTCTAATCATTTTTTTGTAAATTTCTCAGAATTTCATACATCAACCAAATCGTTTCTTGTGTTAAAAAAATAGTTCTATTTCCCATTGAGGGTTTTCTGAAATGTGCCATGCATACACAAAATAGTATGTTTTCAAGCCACTTGCCAAGCATATTATGCTGCCATATAATACCTTTTTCCCCCCAACTCTTTTCCTTTCAGGTAGTTGAAGTTTCTACTTCAAAAACTGGCAAACATGGGCATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGTAATTTCTTTGTCACTTACTTATTATGCTCTACTTATCTAAGTACTGAATTTTTTTTGTCTAAAAATCTTTGCATGTATTCTCTTTTGTTATTTTAATATACATGTTTCTTATCCAAAAAAACTATACCTTTGCAGGTTCCCCATGTTAATCGCACCGATTATCAGCTGATCGACATATCTGAGGATGGTTTTGTAAGTTTTAATTATATTTTTACATGATTTTGCTTTGTATACGAAAGTTTAGATCAATTTCTCTGTCTATCGCTTCAATAAATATTCAAGAAATGTAACCAAAGAGTACATGAAGAAAGGAGGGAGCCTTGCAGTCTTAACCTATATATTGATTTCATTAGTTTATTTTTGCAGGTCAGTCTCCTTACTGAAAATGGAAACACCAAGGATGACCTGAGGCTTCCCACCGATGATAACCTGCTTACGCAGGTACATAAATGATAATATACCGTTACATTTACAAATCTTCAAGTCATTGCCATATAGCTCTCTGCAACGCCATAAATTTTTTCATTCAATTTCATGTTGATAGCTTAAAGATGGGTTCGCTGAAGGCAAAGATCTCGTACTAACTGTCATGTCTGCAATGGGAGAAGAGCAGATCTGTGCTCTCAAGGACATTGGTCCTAAAAATTAAATACAGGGCTACGGCTACACCTGACGATGGCTCAGTGTCATCAGGAGTCCTATCAAGTATGCTTATATGTAATAAAAACATATTATCAGCTGTGAAATTAAAAGCTTAAACATCCATGAAGCTTCTTTCAATGGGAAAATATTATAGGAAATGTTGAACCTGCTGATATCCTTGCAACTCTGATGAAAGGATTACATACATTTCACTCTTCTTTTATATAGTACAATACTTATAAAATCTGTTATCCTCTCGTTTTCTGTCATTTGAATACCCTTGTGAATTGCCTTAGATGTTGGATTCTGCTCATTCAAAACAGTTGTGCTGTTCATTGGGCCACTCTCTCCTTTTTCTTTTGTACAAAGGCTTGTTATTCC ATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCCGGAGCTTCCAAGACTTTTCCTCAGCAGGCTGGAGCCATTCGCAAAAATGGCTACATCGTAATCAAGAACAGACCCTGCAAGGTAGTTGAAGTTTCTACTTCAAAAACTGGCAAACATGGGCATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGTTCCCCATGTTAATCGCACCGATTATCAGCTGATCGACATATCTGAGGATGGTTTTGTCAGTCTCCTTACTGAAAATGGAAACACCAAGGATGACCTGAGGCTTCCCACCGATGATAACCTGCTTACGCAGCTTAAAGATGGGTTCGCTGAAGGCAAAGATCTCGTACTAACTGTCATGTCTGCAATGGGAGAAGAGCAGATCTGTGCTCTCAAGGACATTGGTCCTAAAAATTAA ATGTCGGACGAGGAGCACCACTTCGACTCCAAGGCCGACGCCGGAGCTTCCAAGACTTTTCCTCAGCAGGCTGGAGCCATTCGCAAAAATGGCTACATCGTAATCAAGAACAGACCCTGCAAGGTAGTTGAAGTTTCTACTTCAAAAACTGGCAAACATGGGCATGCAAAGTGCCACTTTGTGGCAATTGACATATTCAATGGGAAGAAACTTGAAGATATTGTTCCTTCTTCTCACAACTGTGATGTTCCCCATGTTAATCGCACCGATTATCAGCTGATCGACATATCTGAGGATGGTTTTGTCAGTCTCCTTACTGAAAATGGAAACACCAAGGATGACCTGAGGCTTCCCACCGATGATAACCTGCTTACGCAGCTTAAAGATGGGTTCGCTGAAGGCAAAGATCTCGTACTAACTGTCATGTCTGCAATGGGAGAAGAGCAGATCTGTGCTCTCAAGGACATTGGTCCTAAAAATTAA MSDEEHHFDSKADAGASKTFPQQAGAIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQLKDGFAEGKDLVLTVMSAMGEEQICALKDIGPKN*
BLAST of Csa1G256200 vs. Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2) HSP 1 Score: 312.0 bits (798), Expect = 3.8e-84 Identity = 148/160 (92.50%), Postives = 155/160 (96.88%), Query Frame = 1
BLAST of Csa1G256200 vs. Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 1.9e-83 Identity = 149/159 (93.71%), Postives = 153/159 (96.23%), Query Frame = 1
BLAST of Csa1G256200 vs. Swiss-Prot
Match: IF5A1_TOBAC (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum GN=EIF-5A1 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 3.2e-83 Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 1
BLAST of Csa1G256200 vs. Swiss-Prot
Match: IF5A1_NICPL (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia GN=EIF-5A1 PE=2 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 3.2e-83 Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 1
BLAST of Csa1G256200 vs. Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 9.4e-83 Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 1
BLAST of Csa1G256200 vs. TrEMBL
Match: A0A0A0LTB3_CUCSA (Eukaryotic translation initiation factor 5A OS=Cucumis sativus GN=Csa_1G256200 PE=3 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 2.6e-87 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Csa1G256200 vs. TrEMBL
Match: A0A067L3L6_JATCU (Eukaryotic translation initiation factor 5A OS=Jatropha curcas GN=JCGZ_04027 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 7.0e-85 Identity = 154/160 (96.25%), Postives = 158/160 (98.75%), Query Frame = 1
BLAST of Csa1G256200 vs. TrEMBL
Match: A0A061GK81_THECC (Eukaryotic translation initiation factor 5A OS=Theobroma cacao GN=TCM_037062 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 7.0e-85 Identity = 154/160 (96.25%), Postives = 158/160 (98.75%), Query Frame = 1
BLAST of Csa1G256200 vs. TrEMBL
Match: A5BZP4_VITVI (Eukaryotic translation initiation factor 5A OS=Vitis vinifera GN=VIT_11s0016g00020 PE=3 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 3.5e-84 Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 1
BLAST of Csa1G256200 vs. TrEMBL
Match: J7F320_CAMSI (Eukaryotic translation initiation factor 5A OS=Camellia sinensis PE=2 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 5.9e-84 Identity = 153/160 (95.62%), Postives = 157/160 (98.12%), Query Frame = 1
BLAST of Csa1G256200 vs. TAIR10
Match: AT1G13950.1 (AT1G13950.1 eukaryotic elongation factor 5A-1) HSP 1 Score: 284.6 bits (727), Expect = 3.7e-77 Identity = 138/159 (86.79%), Postives = 147/159 (92.45%), Query Frame = 1
BLAST of Csa1G256200 vs. TAIR10
Match: AT1G69410.1 (AT1G69410.1 eukaryotic elongation factor 5A-3) HSP 1 Score: 280.8 bits (717), Expect = 5.3e-76 Identity = 134/159 (84.28%), Postives = 148/159 (93.08%), Query Frame = 1
BLAST of Csa1G256200 vs. TAIR10
Match: AT1G26630.1 (AT1G26630.1 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein) HSP 1 Score: 262.3 bits (669), Expect = 2.0e-70 Identity = 123/157 (78.34%), Postives = 142/157 (90.45%), Query Frame = 1
BLAST of Csa1G256200 vs. NCBI nr
Match: gi|449457893|ref|XP_004146682.1| (PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis sativus]) HSP 1 Score: 329.3 bits (843), Expect = 3.7e-87 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Csa1G256200 vs. NCBI nr
Match: gi|659086295|ref|XP_008443857.1| (PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo]) HSP 1 Score: 325.9 bits (834), Expect = 4.1e-86 Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1
BLAST of Csa1G256200 vs. NCBI nr
Match: gi|590572789|ref|XP_007011943.1| (Eukaryotic translation initiation factor 5A-1 [Theobroma cacao]) HSP 1 Score: 321.2 bits (822), Expect = 1.0e-84 Identity = 154/160 (96.25%), Postives = 158/160 (98.75%), Query Frame = 1
BLAST of Csa1G256200 vs. NCBI nr
Match: gi|225468027|ref|XP_002273265.1| (PREDICTED: eukaryotic translation initiation factor 5A [Vitis vinifera]) HSP 1 Score: 318.9 bits (816), Expect = 5.0e-84 Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 1
BLAST of Csa1G256200 vs. NCBI nr
Match: gi|357973570|gb|AET97661.1| (eukaryotic translation initiation factor 5A4 [Camellia sinensis]) HSP 1 Score: 318.2 bits (814), Expect = 8.5e-84 Identity = 153/160 (95.62%), Postives = 157/160 (98.12%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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