Csa1G192190 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G192190
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 11400959 .. 11401583 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAATCCAAAGTTTGAACTTGTAACAGATAGTAGAAATTATAGCGTTGTGATTGAGGAACTGAGTAGGAAAGGTCGGCGACGTTCATCGCCGTCGATGAGAAATGGAGTTTGGGGTGTGTGGCTCTGAAGACAAAAACGCAGTTTGGGATGAGAAACGACGTGGGTCGCCGTCAATTAGAAGCAAAGTGAGATTTGGGGCTCCGTTGTTCGCCGTTGATGAGATATGTGGCCAGCCTTTTGGAGGTGGAGATGGAGAGGATTGAGATTGGAGGGGTTGGGATTTCGTGAAGATGTAGAGAGAGGAAATTTCATCGATGAGATATGCGGTCGGTGGTGGGACGCGTCGATACCGTTCGTGCGTGGGTGGTCGGCCAAATGATTCGTTCGTCGTCGTCGGCCGAAATAGTAGTGGTCATGGGTCGATACAAGAAACTTGGATGGGTTTCCTGTGGCTGGCCGGTGGAGTGGTGAAGATTGGGGATGGGTTCTTTGAGAGGGGTTATCGGAAAGAGGTAGAGAGAAAGGGGAAGAAGTGTAGTGGTTTGGGTGAAGTTTGTGAAGAAGATAGAAATCGTGGATGGGAGAGAGATGGAAAATGTAGGTGGAAATTAGGGATTTTATAG

mRNA sequence

ATGAGATATGCGGTCGGTGGTGGGACGCGTCGATACCGTTCGTGCGTGGGTGGTCGGCCAAATGATTCGTTCGTCGTCGTCGGCCGAAATAGTAGTGGTCATGGGTCGATACAAGAAACTTGGATGGGTTTCCTGTGGCTGGCCGGTGGAGTGGTGAAGATTGGGGATGGGTTCTTTGAGAGGGGTTATCGGAAAGAGGTAGAGAGAAAGGGGAAGAAGTGTAGTGGTTTGGGTGAAGTTTGTGAAGAAGATAGAAATCGTGGATGGGAGAGAGATGGAAAATGTAGGTGGAAATTAGGGATTTTATAG

Coding sequence (CDS)

ATGAGATATGCGGTCGGTGGTGGGACGCGTCGATACCGTTCGTGCGTGGGTGGTCGGCCAAATGATTCGTTCGTCGTCGTCGGCCGAAATAGTAGTGGTCATGGGTCGATACAAGAAACTTGGATGGGTTTCCTGTGGCTGGCCGGTGGAGTGGTGAAGATTGGGGATGGGTTCTTTGAGAGGGGTTATCGGAAAGAGGTAGAGAGAAAGGGGAAGAAGTGTAGTGGTTTGGGTGAAGTTTGTGAAGAAGATAGAAATCGTGGATGGGAGAGAGATGGAAAATGTAGGTGGAAATTAGGGATTTTATAG

Protein sequence

MRYAVGGGTRRYRSCVGGRPNDSFVVVGRNSSGHGSIQETWMGFLWLAGGVVKIGDGFFERGYRKEVERKGKKCSGLGEVCEEDRNRGWERDGKCRWKLGIL*
Homology
[Close]
BLAST of Csa1G192190 vs. TrEMBL
Match: A0A0A0LYN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G192190 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-55
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MRYAVGGGTRRYRSCVGGRPNDSFVVVGRNSSGHGSIQETWMGFLWLAGGVVKIGDGFFE 60
           MRYAVGGGTRRYRSCVGGRPNDSFVVVGRNSSGHGSIQETWMGFLWLAGGVVKIGDGFFE
Sbjct: 1   MRYAVGGGTRRYRSCVGGRPNDSFVVVGRNSSGHGSIQETWMGFLWLAGGVVKIGDGFFE 60

Query: 61  RGYRKEVERKGKKCSGLGEVCEEDRNRGWERDGKCRWKLGIL 103
           RGYRKEVERKGKKCSGLGEVCEEDRNRGWERDGKCRWKLGIL
Sbjct: 61  RGYRKEVERKGKKCSGLGEVCEEDRNRGWERDGKCRWKLGIL 102

[Close]
BLAST of Csa1G192190 vs. NCBI nr
Match: gi|700209975|gb|KGN65071.1| (hypothetical protein Csa_1G192190 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.4e-55
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 

Query: 1   MRYAVGGGTRRYRSCVGGRPNDSFVVVGRNSSGHGSIQETWMGFLWLAGGVVKIGDGFFE 60
           MRYAVGGGTRRYRSCVGGRPNDSFVVVGRNSSGHGSIQETWMGFLWLAGGVVKIGDGFFE
Sbjct: 1   MRYAVGGGTRRYRSCVGGRPNDSFVVVGRNSSGHGSIQETWMGFLWLAGGVVKIGDGFFE 60

Query: 61  RGYRKEVERKGKKCSGLGEVCEEDRNRGWERDGKCRWKLGIL 103
           RGYRKEVERKGKKCSGLGEVCEEDRNRGWERDGKCRWKLGIL
Sbjct: 61  RGYRKEVERKGKKCSGLGEVCEEDRNRGWERDGKCRWKLGIL 102

The following BLAST results are available for this feature:
BLAST of Csa1G192190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYN6_CUCSA1.7e-55100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G192190 PE=4 SV=1[more]
BLAST of Csa1G192190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209975|gb|KGN65071.1|2.4e-55100.00hypothetical protein Csa_1G192190 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G192190.1Csa1G192190.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G192190CSPI01G16110Wild cucumber (PI 183967)cpicuB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G192190Cucurbita maxima (Rimu)cmacuB210
Csa1G192190Cucurbita moschata (Rifu)cmocuB196
Csa1G192190Melon (DHL92) v3.5.1cumeB020
Csa1G192190Watermelon (Charleston Gray)cuwcgB019
Csa1G192190Watermelon (Charleston Gray)cuwcgB022
Csa1G192190Watermelon (97103) v1cuwmB048
Csa1G192190Watermelon (97103) v1cuwmB051
Csa1G192190Cucurbita pepo (Zucchini)cpecuB056
Csa1G192190Cucurbita pepo (Zucchini)cpecuB521
Csa1G192190Bottle gourd (USVL1VR-Ls)culsiB032
Csa1G192190Bottle gourd (USVL1VR-Ls)culsiB020
Csa1G192190Cucumber (Gy14) v2cgybcuB001
Csa1G192190Cucumber (Gy14) v2cgybcuB240
Csa1G192190Melon (DHL92) v3.6.1cumedB015
Csa1G192190Silver-seed gourdcarcuB1051
Csa1G192190Watermelon (97103) v2cuwmbB005
Csa1G192190Watermelon (97103) v2cuwmbB009
Csa1G192190Wax gourdcuwgoB036
Csa1G192190Wax gourdcuwgoB058
Csa1G192190Cucumber (Gy14) v1cgycuB016