Csa1G181460 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G181460
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 11077910 .. 11078116 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCCGTCGGAAATCGAATCAAGTCACTGAATTGAAGCGGCATGAGGATCATATGGCTGAGCACAAACGCCTCGAGACGGTCAACAGCGATGGAGATGTTGGAGATCTGGGGGTCTTGGGGGATGAAAAAGGTGATTTCTTTTAG

mRNA sequence

ATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCCGTCGGAAATCGAATCAAGTCACTGAATTGAAGCGGCATGAGGATCATATGGCTGAGCACAAACGCCTCGAGACGGTCAACAGCGATGGAGATGTTGGAGATCTGGGGGTCTTGGGGGATGAAAAAGGTGATTTCTTTTAG

Coding sequence (CDS)

ATGGCCTCTTCCATTGTTATGGATTCTGATCATCCTATTATGGTAACCCGAAGGAACAATGGAACCCGTCGGAAATCGAATCAAGTCACTGAATTGAAGCGGCATGAGGATCATATGGCTGAGCACAAACGCCTCGAGACGGTCAACAGCGATGGAGATGTTGGAGATCTGGGGGTCTTGGGGGATGAAAAAGGTGATTTCTTTTAG

Protein sequence

MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVLGDEKGDFF*
Homology
[Close]
BLAST of Csa1G181460 vs. TrEMBL
Match: A0A0A0LVS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181460 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.2e-31
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVL 60
          MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVL
Sbjct: 1  MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVL 60

Query: 61 GDEKGDFF 69
          GDEKGDFF
Sbjct: 61 GDEKGDFF 68

[Close]
BLAST of Csa1G181460 vs. NCBI nr
Match: gi|700209938|gb|KGN65034.1| (hypothetical protein Csa_1G181460 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 6.1e-31
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVL 60
          MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVL
Sbjct: 1  MASSIVMDSDHPIMVTRRNNGTRRKSNQVTELKRHEDHMAEHKRLETVNSDGDVGDLGVL 60

Query: 61 GDEKGDFF 69
          GDEKGDFF
Sbjct: 61 GDEKGDFF 68

The following BLAST results are available for this feature:
BLAST of Csa1G181460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVS5_CUCSA4.2e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181460 PE=4 SV=1[more]
BLAST of Csa1G181460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209938|gb|KGN65034.1|6.1e-31100.00hypothetical protein Csa_1G181460 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006487 protein N-linked glycosylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0008250 oligosaccharyltransferase complex
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU094003cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G181460.1Csa1G181460.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU094003CU094003transcribed_cluster