Csa1G166250 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G166250
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionGermin-like protein; contains IPR001929 (Germin)
LocationChr1 : 10344063 .. 10344626 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAATCCAGTGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGACGCCATCATCAACGGCACTTTCTTCACCTTCACAGGCCTCCGCTCAGCTTTCACCGATTTCCCTTCAAATTTCAAACCCACAAAAGCCACCTTCTCCGAGTTCCCAGCCCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCATTCCCACCCTCGCTCTGCCGAGCTTCTCCTTGTCGTCAGCGGCAGCCTCCAAGTTGGCTTTGTCGATACCGCCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGGTTGGTCCATTTCCAGCTCAATGTTGACCCTCGAAACTCTGCCACGGCCATCGCCACCTTCGCCAGTGCTAACCCTGGCACTGTGGCGTTGCCATCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAGACTGATGTGGCTGTTATTCAAAGTATAAGGGCTGGCCTTACACCACCAAAGAGTTAG

mRNA sequence

ATGGCCAAATCCAGTGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGACGCCATCATCAACGGCACTTTCTTCACCTTCACAGGCCTCCGCTCAGCTTTCACCGATTTCCCTTCAAATTTCAAACCCACAAAAGCCACCTTCTCCGAGTTCCCAGCCCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCATTCCCACCCTCGCTCTGCCGAGCTTCTCCTTGTCGTCAGCGGCAGCCTCCAAGTTGGCTTTGTCGATACCGCCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGGTTGGTCCATTTCCAGCTCAATGTTGACCCTCGAAACTCTGCCACGGCCATCGCCACCTTCGCCAGTGCTAACCCTGGCACTGTGGCGTTGCCATCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAGACTGATGTGGCTGTTATTCAAAGTATAAGGGCTGGCCTTACACCACCAAAGAGTTAG

Coding sequence (CDS)

ATGGCCAAATCCAGTGACCCAGATCCGGTCGTCGACTACTTGACATCCCCCCTTGACGCCATCATCAACGGCACTTTCTTCACCTTCACAGGCCTCCGCTCAGCTTTCACCGATTTCCCTTCAAATTTCAAACCCACAAAAGCCACCTTCTCCGAGTTCCCAGCCCTTCTCAGCCAGAGCGTCTCCATGGCCATCCTCCAGTACCCGGCTGGCTCCATCAACCCACCTCATTCCCACCCTCGCTCTGCCGAGCTTCTCCTTGTCGTCAGCGGCAGCCTCCAAGTTGGCTTTGTCGATACCGCCAACCAGTTCTTCAACCAGACCCTTCAAGTTGGGGACTTGTTTTTGTTCCCCAAAGGGTTGGTCCATTTCCAGCTCAATGTTGACCCTCGAAACTCTGCCACGGCCATCGCCACCTTCGCCAGTGCTAACCCTGGCACTGTGGCGTTGCCATCGACGGTGTTTACGAGTGGGATTAGTGATGAGGTTCTTGCTGAGGCGTTCAAGACTGATGTGGCTGTTATTCAAAGTATAAGGGCTGGCCTTACACCACCAAAGAGTTAG

Protein sequence

MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRAGLTPPKS*
Homology
[Close]
BLAST of Csa1G166250 vs. Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.7e-48
Identity = 100/193 (51.81%), Postives = 127/193 (65.80%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLT----SPLDAIINGTFFTFTGLRSAFTDF----PSNFKPTKATFSE 60
           +  + DPD + DY+     +P++  I G FFTFTG R  F       P++F  TKAT +E
Sbjct: 22  LVMAGDPDILTDYVIPANGNPMN--ITGDFFTFTGFRKVFNTSSAPEPNSFTVTKATMAE 81

Query: 61  FPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVG 120
           FPAL  QSVS A L +P  ++NPPH+HPRSAELLLVV G+L VGF+DT N+ + Q L  G
Sbjct: 82  FPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTTNKLYTQDLAAG 141

Query: 121 DLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDV 180
           D+F+FPKG+VHFQ N      A A++ F SA PG V +P TVF +GI D VLA++FKTDV
Sbjct: 142 DMFVFPKGMVHFQFN-SGNQPAMALSAFGSAAPGVVPVPVTVFGTGIDDAVLAKSFKTDV 201

Query: 181 AVIQSIRAGLTPP 186
             I  ++A LTPP
Sbjct: 202 PTILKLKANLTPP 211

[Close]
BLAST of Csa1G166250 vs. Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.5e-47
Identity = 101/194 (52.06%), Postives = 127/194 (65.46%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDAI--INGTFFTFTGLRSAFT---DFP---SNFKPTKATFSE 60
           +  + DPD + DY+         I G FFTFTG R+  +     P   +NF  TKAT +E
Sbjct: 20  LVMAGDPDILTDYVIPAGSNAENITGDFFTFTGFRNPLSMNMSMPMPNANFTVTKATMAE 79

Query: 61  FPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVG 120
           FPAL  QSVS A+L YP  ++NPPH+HPRSAELLL+V G+L VGFVDT N+ + Q L  G
Sbjct: 80  FPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDTTNKLYTQDLAAG 139

Query: 121 DLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDV 180
           D+F+FPKG+VHFQ N      A A++ F SA  G V++P TVF + I D VLA++FKTDV
Sbjct: 140 DMFVFPKGMVHFQFN-SGNQPAMALSAFGSAAAGLVSVPVTVFGTNIDDAVLAKSFKTDV 199

Query: 181 AVIQSIRAGLTPPK 187
             IQ ++AGLTPPK
Sbjct: 200 PTIQKLKAGLTPPK 212

[Close]
BLAST of Csa1G166250 vs. Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.1e-40
Identity = 88/189 (46.56%), Postives = 118/189 (62.43%), Query Frame = 1 

Query: 2   AKSSDPDPVVDYLTSPLDAI---INGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLS 61
           A ++DPD + D++  P D     I+G FFT+  L +  +  P+    TKAT +EFPALL 
Sbjct: 23  AGAADPDILTDFVV-PSDTDPSGIDGAFFTYKNLVTGNSGDPAKLTVTKATHAEFPALLG 82

Query: 62  QSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQ--FFNQTLQVGDLFL 121
           QSVS A L + AG++NPPH HPR++ELL+VV G L VG VD A     + QTLQ GD+F+
Sbjct: 83  QSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAARNGTVYTQTLQTGDMFV 142

Query: 122 FPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQ 181
           FPKG+VHFQ N      A A + F SA PGT++LP+ +F SGI D +L ++  TD A + 
Sbjct: 143 FPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGSGIDDTILDKSMHTDQATVD 202

Query: 182 SIRAGLTPP 186
            ++    PP
Sbjct: 203 QLKQDQAPP 210

[Close]
BLAST of Csa1G166250 vs. Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-27
Identity = 67/167 (40.12%), Postives = 98/167 (58.68%), Query Frame = 1 

Query: 17  PLDAIINGTFFTFTGLRS-AFTDFPSNFKPTKATFSEFPALLSQSVSMAILQYPAGSINP 76
           P  A +    F F GL++   T+ P+    T A    FP + +  VSMA + Y  G  NP
Sbjct: 48  PCKANVTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNP 107

Query: 77  PHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGLVHFQLNVDPRNSAT 136
           PH+HPR+ E++ V+ G L+VGF+ TAN+ F +T+  G++F+FP+GLVHFQ N      A 
Sbjct: 108 PHTHPRATEIIFVLEGVLEVGFITTANKLFTKTVTAGEVFVFPRGLVHFQQN-RGHGPAA 167

Query: 137 AIATFASANPGTVALPSTVFTSG--ISDEVLAEAFKTDVAVIQSIRA 181
            IA F S   GT A+ +T+F +   +  +VLA+AF+ DV  + +I+A
Sbjct: 168 VIAAFNSQLQGTQAIAATLFAAAPPVPSDVLAKAFRVDVPQVDAIKA 213

[Close]
BLAST of Csa1G166250 vs. Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDA--------------IINGTFFTFTGLRSAFTDFPSNFKPT 60
           ++ S+DPD + D   + L +              + +  FF+    +   T+       T
Sbjct: 19  ISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVT 78

Query: 61  KATFSEFPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFN 120
            A     P L +  VS++ + Y  G +NPPH+HPR+ E++ V+ G+L VGF+ TAN+  +
Sbjct: 79  GANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLIS 138

Query: 121 QTLQVGDLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVF--TSGISDEVL 180
           Q+L+ GD+F FPKGLVHFQ N +    A+ IA F S  PGT +L +T+F  T  + D +L
Sbjct: 139 QSLKKGDVFAFPKGLVHFQKN-NGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDNIL 198

Query: 181 AEAFKTDVAVIQSIRAGLTPPK 187
           A+AF+T    ++ I++   P K
Sbjct: 199 AQAFQTSPGTVKHIKSKFQPKK 219

[Close]
BLAST of Csa1G166250 vs. TrEMBL
Match: A0A0A0LSQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166250 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 5.8e-99
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQS 60
           MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQS
Sbjct: 1   MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQS 60

Query: 61  VSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKG 120
           VSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKG
Sbjct: 61  VSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKG 120

Query: 121 LVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRA 180
           LVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRA
Sbjct: 121 LVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRA 180

Query: 181 GLTPPKS 188
           GLTPPKS
Sbjct: 181 GLTPPKS 187

[Close]
BLAST of Csa1G166250 vs. TrEMBL
Match: B9RPU7_RICCO (Nectarin-1, putative OS=Ricinus communis GN=RCOM_1541080 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.5e-59
Identity = 113/185 (61.08%), Postives = 148/185 (80.00%), Query Frame = 1 

Query: 4   SSDPDPVVDYL--TSPLDAIINGTFFTFTGLRS--AFTDFPSNFKPTKATFSEFPALLSQ 63
           +SDPD + D++   +   A I+G FFTFTG+RS  A  D+P +FK TKA+ +EFPAL  Q
Sbjct: 20  ASDPDIITDFIIPANSTAAAIDGNFFTFTGMRSIVAGDDYPPSFKVTKASMAEFPALNGQ 79

Query: 64  SVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPK 123
           SVS+A+L++PAGS+NPPH+HPRSAELL VV+GSL+VGF+DT N+ + QTLQ GD+F+FPK
Sbjct: 80  SVSLAVLEFPAGSVNPPHTHPRSAELLFVVAGSLEVGFIDTTNKLYTQTLQPGDIFVFPK 139

Query: 124 GLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIR 183
           GLVHFQ N DP+  A A++ F SAN GTV++PSTVF +GI D+VLA+AFKTD+A IQ I+
Sbjct: 140 GLVHFQSNSDPKEPAAAVSAFGSANAGTVSVPSTVFATGIDDDVLAKAFKTDIATIQKIK 199

Query: 184 AGLTP 185
           +GL P
Sbjct: 200 SGLAP 204

[Close]
BLAST of Csa1G166250 vs. TrEMBL
Match: D7TCS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00730 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.9e-58
Identity = 112/185 (60.54%), Postives = 144/185 (77.84%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAF-TDFPSNFKPTKATFSEFPALLSQ 60
           +A + DPD V D++  P  + ++G FFTFTG+R+      P+ FK TKA+ +EFPAL  Q
Sbjct: 22  IAIAGDPDIVSDFIIPPNMSAVDGNFFTFTGIRALVGAPEPTTFKVTKASLAEFPALNGQ 81

Query: 61  SVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPK 120
           SVS A+L++P GS+NPPH+HPRSAELL ++ GSLQVGFVDT N+ F QTLQ GD+F FPK
Sbjct: 82  SVSTAVLEFPPGSVNPPHTHPRSAELLFLLDGSLQVGFVDTTNKLFTQTLQAGDMFAFPK 141

Query: 121 GLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIR 180
           GLVHFQ NVD +NSA A++ F SAN GTV+LP+TVF +GI D +LA++FKTDVA IQ+I+
Sbjct: 142 GLVHFQYNVDAKNSAVAVSAFGSANAGTVSLPNTVFATGIDDNILAKSFKTDVATIQAIK 201

Query: 181 AGLTP 185
           AGL P
Sbjct: 202 AGLAP 206

[Close]
BLAST of Csa1G166250 vs. TrEMBL
Match: B9HVV6_POPTR (Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0010s24700g PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 3.8e-58
Identity = 113/183 (61.75%), Postives = 142/183 (77.60%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAF-TDFPSNFKPTKATFSEFPALLSQ 60
           +  +SDPD + D+++      I+G FFTFT LR  F +D+P NFK TKA  +EFPAL  Q
Sbjct: 17  LVTASDPDIITDFVSPANLTKIDGDFFTFTALRGFFDSDYPPNFKVTKAGMAEFPALNGQ 76

Query: 61  SVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPK 120
           SVS A+L+YP G+INPPH HPRSAELL VV GSL+VGFVDT N+ F QTLQ+GD+F+FPK
Sbjct: 77  SVSFAVLEYPVGTINPPHIHPRSAELLFVVDGSLEVGFVDTTNKLFTQTLQLGDMFVFPK 136

Query: 121 GLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIR 180
           GLVH+Q N D +N ATAI+ F SAN GTV++P+TVF +GI D +LA+AFKTDVA IQ ++
Sbjct: 137 GLVHYQSNADSKNPATAISAFGSANAGTVSVPTTVFATGIDDNILAKAFKTDVATIQKLK 196

Query: 181 AGL 183
           AGL
Sbjct: 197 AGL 199

[Close]
BLAST of Csa1G166250 vs. TrEMBL
Match: A0A067KE80_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12703 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-57
Identity = 110/185 (59.46%), Postives = 144/185 (77.84%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFT-DFPSNFKPTKATFSEFPALLSQ 60
           + ++SDPD + D++ +P +   +GTFFTFTG R  F    P+ FK TKA+ +EFPAL  Q
Sbjct: 13  LVQASDPDILSDFI-APQNQTFDGTFFTFTGFRGIFNVPDPATFKVTKASMAEFPALNGQ 72

Query: 61  SVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPK 120
           SVS A+LQYPAG +NPPH+HPR+AELL VV GSL+VGF+DT N+ + QTLQ+GD+F+FPK
Sbjct: 73  SVSYAVLQYPAGGVNPPHTHPRAAELLFVVLGSLEVGFIDTTNKLYTQTLQLGDIFVFPK 132

Query: 121 GLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIR 180
           GLVH+Q N DP+N A A + F SAN GTV++P+TVFT+GI D+ LA++FKTDV  IQ I+
Sbjct: 133 GLVHYQYNADPKNPAIAFSAFGSANAGTVSVPTTVFTTGIDDQTLAQSFKTDVPTIQKIK 192

Query: 181 AGLTP 185
           AGL P
Sbjct: 193 AGLAP 196

[Close]
BLAST of Csa1G166250 vs. TAIR10
Match: AT1G09560.1 (AT1G09560.1 germin-like protein 5)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-27
Identity = 70/202 (34.65%), Postives = 109/202 (53.96%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDA--------------IINGTFFTFTGLRSAFTDFPSNFKPT 60
           ++ S+DPD + D   + L +              + +  FF+    +   T+       T
Sbjct: 19  ISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVT 78

Query: 61  KATFSEFPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFN 120
            A     P L +  VS++ + Y  G +NPPH+HPR+ E++ V+ G+L VGF+ TAN+  +
Sbjct: 79  GANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLIS 138

Query: 121 QTLQVGDLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVF--TSGISDEVL 180
           Q+L+ GD+F FPKGLVHFQ N +    A+ IA F S  PGT +L +T+F  T  + D +L
Sbjct: 139 QSLKKGDVFAFPKGLVHFQKN-NGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDNIL 198

Query: 181 AEAFKTDVAVIQSIRAGLTPPK 187
           A+AF+T    ++ I++   P K
Sbjct: 199 AQAFQTSPGTVKHIKSKFQPKK 219

[Close]
BLAST of Csa1G166250 vs. TAIR10
Match: AT3G04200.1 (AT3G04200.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27
Identity = 76/202 (37.62%), Postives = 109/202 (53.96%), Query Frame = 1 

Query: 6   DPDPVVDYLTSPLDA---IINGTF-----------FTFTGLRSAFTDFPSNFKPTKAT-- 65
           DP+P+ D+  +  +     +NG F           F+++GL  A     +NF  +  T  
Sbjct: 27  DPNPLQDFCVAASETNRVFVNGKFCKDPKSVTANDFSYSGLNIARNT--TNFLGSNVTTV 86

Query: 66  -FSEFPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDT---ANQFF 125
             ++ P L +  VS+A L +  G  NPPH HPR+ E+L+V  G L VGFV +    N+ F
Sbjct: 87  DVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLF 146

Query: 126 NQTLQVGDLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTS--GISDEV 185
            + L+ GD+F+FP GL+HFQ+NV  R  A A A F S NPGT+ +   VF S   I  EV
Sbjct: 147 YKVLKRGDVFVFPIGLIHFQMNV-RRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEV 206

[Close]
BLAST of Csa1G166250 vs. TAIR10
Match: AT5G38960.1 (AT5G38960.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 3.1e-27
Identity = 74/195 (37.95%), Postives = 109/195 (55.90%), Query Frame = 1 

Query: 2   AKSSDPDPVVDY---LTSPLDAI-INGTF-----------FTFTGLRSAFT--DFPSNFK 61
           A +SDP P+ D+   + +P +A+ +NG F           F F+GL  A T    P    
Sbjct: 20  AIASDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSN 79

Query: 62  PTKATFSEFPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDT--AN 121
            T    ++ P L +  +S+  + Y     NPPH+HPR+ E+LLV  G+L VGF  +   N
Sbjct: 80  VTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPEN 139

Query: 122 QFFNQTLQVGDLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTS--GIS 176
           + FN+TL  GD+F+FP+GL+HFQ+N+  +  A A A+ +S NPG + + +T+F S   I 
Sbjct: 140 RLFNKTLNKGDVFVFPEGLIHFQVNIG-KQPAVAFASLSSQNPGVIIIGNTLFGSKPPID 199

[Close]
BLAST of Csa1G166250 vs. TAIR10
Match: AT1G18980.1 (AT1G18980.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 4.1e-27
Identity = 72/191 (37.70%), Postives = 104/191 (54.45%), Query Frame = 1 

Query: 4   SSDPDPVVDYLTSPLDAI--ING---------TFFTFTGLRSAF-TDFPSNFKPTKATFS 63
           SSD DP+ D+    L A   ING         + F F+GL     T  P+    + A   
Sbjct: 27  SSDSDPLQDFCVGDLKASPSINGFPCKSSVSASDFFFSGLGGPLNTSTPNGVAVSPANVL 86

Query: 64  EFPALLSQSVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQV 123
            FP L +  +SM  +++  G +NPPHSHPR+ E  +V+ GS+ VGF+ T N  F++ L  
Sbjct: 87  TFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTNNTLFSKVLNA 146

Query: 124 GDLFLFPKGLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSG--ISDEVLAEAFK 181
           G++F+ P+GLVHFQ NV  +  A  I +F S  PG+  LPST+F S   I + VL + F+
Sbjct: 147 GEMFVVPRGLVHFQWNVG-KVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFR 206

[Close]
BLAST of Csa1G166250 vs. TAIR10
Match: AT3G62020.1 (AT3G62020.1 germin-like protein 10)

HSP 1 Score: 118.2 bits (295), Expect = 5.3e-27
Identity = 63/179 (35.20%), Postives = 100/179 (55.87%), Query Frame = 1 

Query: 11  VDYLTSPLDAIINGTFFTFTGL-RSAFTDFPSNFKPTKATFSEFPALLSQSVSMAILQYP 70
           V+  T   ++ I  + F F G+ + A  +       T A   +   L +  VS+A + Y 
Sbjct: 41  VNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYA 100

Query: 71  AGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGLVHFQLNVD 130
            G +NPPH+HPR+ E++ V+ G L VGF+ TAN+ F +T++ G++F+FP+GL+H+Q N D
Sbjct: 101 PGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNND 160

Query: 131 PRNSATAIATFASANPGTVALPSTVFTS--GISDEVLAEAFKTDVAVIQSIRAGLTPPK 187
               A+ I+ F S  PGT ++ +T+FT+   I D VL   F+     I+ I++   P K
Sbjct: 161 KAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAPKK 219

[Close]
BLAST of Csa1G166250 vs. NCBI nr
Match: gi|449443636|ref|XP_004139583.1| (PREDICTED: putative germin-like protein 9-2 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 8.4e-99
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQS 60
           MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQS
Sbjct: 1   MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQS 60

Query: 61  VSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKG 120
           VSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKG
Sbjct: 61  VSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKG 120

Query: 121 LVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRA 180
           LVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRA
Sbjct: 121 LVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRA 180

Query: 181 GLTPPKS 188
           GLTPPKS
Sbjct: 181 GLTPPKS 187

[Close]
BLAST of Csa1G166250 vs. NCBI nr
Match: gi|659072216|ref|XP_008463986.1| (PREDICTED: germin-like protein 9-3 [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 4.9e-91
Identity = 171/186 (91.94%), Postives = 178/186 (95.70%), Query Frame = 1 

Query: 2   AKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQSV 61
           AKS DPDPVVDYLTSPL AIIN TFFTFTGLRSAFTDFP NFKPTKATF+EFPALLSQSV
Sbjct: 25  AKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFTDFPPNFKPTKATFNEFPALLSQSV 84

Query: 62  SMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGL 121
           SMAILQYPAGSINPPH+HPRSAELLLVVSGSLQVGFVDT+NQFFNQTLQVGDLFLFPKGL
Sbjct: 85  SMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGFVDTSNQFFNQTLQVGDLFLFPKGL 144

Query: 122 VHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRAG 181
           VHFQ N DP+NSATAIATFASAN GTV+LPSTVFTSGISDEVLAEAFKTDVA+IQSI+ G
Sbjct: 145 VHFQFNADPQNSATAIATFASANAGTVSLPSTVFTSGISDEVLAEAFKTDVAIIQSIKTG 204

Query: 182 LTPPKS 188
           LTPPKS
Sbjct: 205 LTPPKS 210

[Close]
BLAST of Csa1G166250 vs. NCBI nr
Match: gi|255549426|ref|XP_002515766.1| (PREDICTED: germin-like protein 9-3 [Ricinus communis])

HSP 1 Score: 235.7 bits (600), Expect = 6.5e-59
Identity = 113/185 (61.08%), Postives = 148/185 (80.00%), Query Frame = 1 

Query: 4   SSDPDPVVDYL--TSPLDAIINGTFFTFTGLRS--AFTDFPSNFKPTKATFSEFPALLSQ 63
           +SDPD + D++   +   A I+G FFTFTG+RS  A  D+P +FK TKA+ +EFPAL  Q
Sbjct: 20  ASDPDIITDFIIPANSTAAAIDGNFFTFTGMRSIVAGDDYPPSFKVTKASMAEFPALNGQ 79

Query: 64  SVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPK 123
           SVS+A+L++PAGS+NPPH+HPRSAELL VV+GSL+VGF+DT N+ + QTLQ GD+F+FPK
Sbjct: 80  SVSLAVLEFPAGSVNPPHTHPRSAELLFVVAGSLEVGFIDTTNKLYTQTLQPGDIFVFPK 139

Query: 124 GLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIR 183
           GLVHFQ N DP+  A A++ F SAN GTV++PSTVF +GI D+VLA+AFKTD+A IQ I+
Sbjct: 140 GLVHFQSNSDPKEPAAAVSAFGSANAGTVSVPSTVFATGIDDDVLAKAFKTDIATIQKIK 199

Query: 184 AGLTP 185
           +GL P
Sbjct: 200 SGLAP 204

[Close]
BLAST of Csa1G166250 vs. NCBI nr
Match: gi|743832019|ref|XP_011024175.1| (PREDICTED: germin-like protein 9-3 [Populus euphratica])

HSP 1 Score: 233.8 bits (595), Expect = 2.5e-58
Identity = 113/180 (62.78%), Postives = 141/180 (78.33%), Query Frame = 1 

Query: 4   SSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAF-TDFPSNFKPTKATFSEFPALLSQSVS 63
           +SDPD + D++       I+G FFTFT LR  F +D+P NFK TKA  +EFPAL  QSVS
Sbjct: 20  ASDPDIITDFVVPANLTNIDGDFFTFTALRGFFDSDYPPNFKVTKAGMAEFPALNGQSVS 79

Query: 64  MAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGLV 123
            A+L+YP G+INPPH HPRSAELL VV GSL+VGFVDT N+ F QTLQ+GD+F+FPKGLV
Sbjct: 80  FAVLEYPLGTINPPHIHPRSAELLFVVDGSLEVGFVDTTNKLFTQTLQLGDMFVFPKGLV 139

Query: 124 HFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRAGL 183
           H+Q N DP+N ATAI+ F SAN GTV++P+TVF +G+ D +LA+AFKTDVA IQ ++AGL
Sbjct: 140 HYQSNADPQNPATAISAFGSANAGTVSVPTTVFATGVDDNILAKAFKTDVATIQKLKAGL 199

[Close]
BLAST of Csa1G166250 vs. NCBI nr
Match: gi|225464908|ref|XP_002273453.1| (PREDICTED: putative germin-like protein 9-2 [Vitis vinifera])

HSP 1 Score: 233.0 bits (593), Expect = 4.2e-58
Identity = 112/185 (60.54%), Postives = 144/185 (77.84%), Query Frame = 1 

Query: 1   MAKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAF-TDFPSNFKPTKATFSEFPALLSQ 60
           +A + DPD V D++  P  + ++G FFTFTG+R+      P+ FK TKA+ +EFPAL  Q
Sbjct: 22  IAIAGDPDIVSDFIIPPNMSAVDGNFFTFTGIRALVGAPEPTTFKVTKASLAEFPALNGQ 81

Query: 61  SVSMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPK 120
           SVS A+L++P GS+NPPH+HPRSAELL ++ GSLQVGFVDT N+ F QTLQ GD+F FPK
Sbjct: 82  SVSTAVLEFPPGSVNPPHTHPRSAELLFLLDGSLQVGFVDTTNKLFTQTLQAGDMFAFPK 141

Query: 121 GLVHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIR 180
           GLVHFQ NVD +NSA A++ F SAN GTV+LP+TVF +GI D +LA++FKTDVA IQ+I+
Sbjct: 142 GLVHFQYNVDAKNSAVAVSAFGSANAGTVSLPNTVFATGIDDNILAKSFKTDVATIQAIK 201

Query: 181 AGLTP 185
           AGL P
Sbjct: 202 AGLAP 206

The following BLAST results are available for this feature:
BLAST of Csa1G166250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL92_ORYSJ6.7e-4851.81Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600... [more]
GL93_ORYSJ1.5e-4752.06Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=... [more]
GL91_ORYSJ5.1e-4046.56Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=... [more]
GL11_ORYSJ1.0e-2740.12Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1[more]
GL21_ARATH2.5e-2634.65Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV... [more]
BLAST of Csa1G166250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSQ3_CUCSA5.8e-99100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166250 PE=3 SV=1[more]
B9RPU7_RICCO4.5e-5961.08Nectarin-1, putative OS=Ricinus communis GN=RCOM_1541080 PE=3 SV=1[more]
D7TCS5_VITVI2.9e-5860.54Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00730 PE=3 SV=... [more]
B9HVV6_POPTR3.8e-5861.75Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0010s24700g PE=3 SV=1[more]
A0A067KE80_JATCU1.1e-5759.46Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12703 PE=3 SV=1[more]
BLAST of Csa1G166250 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09560.11.4e-2734.65 germin-like protein 5[more]
AT3G04200.12.4e-2737.62 RmlC-like cupins superfamily protein[more]
AT5G38960.13.1e-2737.95 RmlC-like cupins superfamily protein[more]
AT1G18980.14.1e-2737.70 RmlC-like cupins superfamily protein[more]
AT3G62020.15.3e-2735.20 germin-like protein 10[more]
BLAST of Csa1G166250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443636|ref|XP_004139583.1|8.4e-99100.00PREDICTED: putative germin-like protein 9-2 [Cucumis sativus][more]
gi|659072216|ref|XP_008463986.1|4.9e-9191.94PREDICTED: germin-like protein 9-3 [Cucumis melo][more]
gi|255549426|ref|XP_002515766.1|6.5e-5961.08PREDICTED: germin-like protein 9-3 [Ricinus communis][more]
gi|743832019|ref|XP_011024175.1|2.5e-5862.78PREDICTED: germin-like protein 9-3 [Populus euphratica][more]
gi|225464908|ref|XP_002273453.1|4.2e-5860.54PREDICTED: putative germin-like protein 9-2 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
Vocabulary: Molecular Function
TermDefinition
GO:0030145manganese ion binding
GO:0045735nutrient reservoir activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019430 removal of superoxide radicals
cellular_component GO:0005576 extracellular region
cellular_component GO:0005618 cell wall
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0004784 superoxide dismutase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G166250.1Csa1G166250.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 77..97
score: 1.1E-21coord: 141..156
score: 1.1E-21coord: 107..127
score: 1.1
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 46..172
score: 7.7
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 30..176
score: 3.6
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 46..180
score: 6.69
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 37..180
score: 1.9
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 1..182
score: 3.6
NoneNo IPR availablePANTHERPTHR31238:SF47SUBFAMILY NOT NAMEDcoord: 1..182
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G166250Cla003053Watermelon (97103) v1cuwmB042
Csa1G166250MELO3C004688Melon (DHL92) v3.5.1cumeB015
Csa1G166250ClCG01G012130Watermelon (Charleston Gray)cuwcgB016
Csa1G166250Lsi03G001270Bottle gourd (USVL1VR-Ls)culsiB046
Csa1G166250MELO3C004688.2Melon (DHL92) v3.6.1cumedB010
Csa1G166250Bhi08G000034Wax gourdcuwgoB049
Csa1G166250CSPI01G14850Wild cucumber (PI 183967)cpicuB000
Csa1G166250Cucsa.319810Cucumber (Gy14) v1cgycuB457
Csa1G166250CsGy1G014680Cucumber (Gy14) v2cgybcuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G166250Watermelon (97103) v2cuwmbB007
Csa1G166250Watermelon (97103) v2cuwmbB009
Csa1G166250Watermelon (97103) v2cuwmbB018
Csa1G166250Watermelon (97103) v2cuwmbB026
Csa1G166250Cucumber (Chinese Long) v2cucuB016
Csa1G166250Cucumber (Gy14) v1cgycuB342
Csa1G166250Cucurbita maxima (Rimu)cmacuB399
Csa1G166250Cucurbita maxima (Rimu)cmacuB579
Csa1G166250Cucurbita moschata (Rifu)cmocuB383
Csa1G166250Cucurbita moschata (Rifu)cmocuB569
Csa1G166250Melon (DHL92) v3.5.1cumeB068
Csa1G166250Watermelon (Charleston Gray)cuwcgB006
Csa1G166250Watermelon (Charleston Gray)cuwcgB028
Csa1G166250Watermelon (97103) v1cuwmB007
Csa1G166250Watermelon (97103) v1cuwmB057
Csa1G166250Watermelon (97103) v1cuwmB065
Csa1G166250Cucurbita pepo (Zucchini)cpecuB020
Csa1G166250Cucurbita pepo (Zucchini)cpecuB848
Csa1G166250Bottle gourd (USVL1VR-Ls)culsiB005
Csa1G166250Bottle gourd (USVL1VR-Ls)culsiB021
Csa1G166250Melon (DHL92) v3.6.1cumedB061
Csa1G166250Melon (DHL92) v3.6.1cumedB078
Csa1G166250Silver-seed gourdcarcuB0000
Csa1G166250Silver-seed gourdcarcuB0931