Cla003053 (gene) Watermelon (97103) v1

Overview
NameCla003053
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGermin-like protein 1 (AHRD V1 ***- Q84XR7_MEDTR); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold
LocationChr1 : 15690960 .. 15691586 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTCCTCTCTACAAAATCAGTTACATTATTCTTCTTCTTCATTTTAGGCATCTTTTCCACGGCGGAATCCGGCGACCCAGATCCGATCGTGGACTACTTGACATTCCCACTAGGCGCCACCGCCAACGGTACTTTCTTCACCTTCACAGGCCTTCGCTCAGCCTTCACTGAATTCCCTCCAAATTTCAAACCCACAAAAGCCACCTTCGTTGAGTTCCCAGCCCTTCTCAGCCAGAGTGTCTCTATGGCCATCCTCCAGTACCCTGCCGGCTCCCTCAACCCGCCCCACACCCACCCCCGCTCCGCCGAGCTCCTCCTCGTTGTCAGCGGTAGCCTACAGGTCGGCTTCGTGGATACCACCAACCAGCTCTTCAACCAGACCCTTCAGCTTGGGGACATGTTTTTGTTCCCTAAAGGGTTGGTCCATTTCCAGTTCAATGCGGACCCTCGAAACTCCGCCACCGCCATTGCTGCCTTCGCCAGTGCTAACCCTGGCACCGTGTCTTTGCCCCCAACCGTGTTTACCAGTGGGATTAGTGATGAGGTTCTTGCTCAGGCTTTCAAGACTGATGTGGTTGTTATTCAAAGCATAAAGGCTGGCCTTGCACCACCACCGAGTTAG

mRNA sequence

ATGGCTTTCCTCTCTACAAAATCAGTTACATTATTCTTCTTCTTCATTTTAGGCATCTTTTCCACGGCGGAATCCGGCGACCCAGATCCGATCGTGGACTACTTGACATTCCCACTAGGCGCCACCGCCAACGGTACTTTCTTCACCTTCACAGGCCTTCGCTCAGCCTTCACTGAATTCCCTCCAAATTTCAAACCCACAAAAGCCACCTTCGTTGAGTTCCCAGCCCTTCTCAGCCAGAGTGTCTCTATGGCCATCCTCCAGTACCCTGCCGGCTCCCTCAACCCGCCCCACACCCACCCCCGCTCCGCCGAGCTCCTCCTCGTTGTCAGCGGTAGCCTACAGGTCGGCTTCGTGGATACCACCAACCAGCTCTTCAACCAGACCCTTCAGCTTGGGGACATGTTTTTGTTCCCTAAAGGGTTGGTCCATTTCCAGTTCAATGCGGACCCTCGAAACTCCGCCACCGCCATTGCTGCCTTCGCCAGTGCTAACCCTGGCACCGTGTCTTTGCCCCCAACCGTGTTTACCAGTGGGATTAGTGATGAGGTTCTTGCTCAGGCTTTCAAGACTGATGTGGTTGTTATTCAAAGCATAAAGGCTGGCCTTGCACCACCACCGAGTTAG

Coding sequence (CDS)

ATGGCTTTCCTCTCTACAAAATCAGTTACATTATTCTTCTTCTTCATTTTAGGCATCTTTTCCACGGCGGAATCCGGCGACCCAGATCCGATCGTGGACTACTTGACATTCCCACTAGGCGCCACCGCCAACGGTACTTTCTTCACCTTCACAGGCCTTCGCTCAGCCTTCACTGAATTCCCTCCAAATTTCAAACCCACAAAAGCCACCTTCGTTGAGTTCCCAGCCCTTCTCAGCCAGAGTGTCTCTATGGCCATCCTCCAGTACCCTGCCGGCTCCCTCAACCCGCCCCACACCCACCCCCGCTCCGCCGAGCTCCTCCTCGTTGTCAGCGGTAGCCTACAGGTCGGCTTCGTGGATACCACCAACCAGCTCTTCAACCAGACCCTTCAGCTTGGGGACATGTTTTTGTTCCCTAAAGGGTTGGTCCATTTCCAGTTCAATGCGGACCCTCGAAACTCCGCCACCGCCATTGCTGCCTTCGCCAGTGCTAACCCTGGCACCGTGTCTTTGCCCCCAACCGTGTTTACCAGTGGGATTAGTGATGAGGTTCTTGCTCAGGCTTTCAAGACTGATGTGGTTGTTATTCAAAGCATAAAGGCTGGCCTTGCACCACCACCGAGTTAG

Protein sequence

MAFLSTKSVTLFFFFILGIFSTAESGDPDPIVDYLTFPLGATANGTFFTFTGLRSAFTEFPPNFKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTNQLFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSGISDEVLAQAFKTDVVVIQSIKAGLAPPPS
Homology
[Close]
BLAST of Cla003053 vs. Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.5e-52
Identity = 111/191 (58.12%), Postives = 131/191 (68.59%), Query Frame = 1 

Query: 25  SGDPDPIVDYLTFPLGATAN---GTFFTFTGLRSAFT---EFP---PNFKPTKATFVEFP 84
           +GDPD + DY+  P G+ A    G FFTFTG R+  +     P    NF  TKAT  EFP
Sbjct: 23  AGDPDILTDYV-IPAGSNAENITGDFFTFTGFRNPLSMNMSMPMPNANFTVTKATMAEFP 82

Query: 85  ALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTNQLFNQTLQLGDM 144
           AL  QSVS A+L YP  +LNPPHTHPRSAELLL+V G+L VGFVDTTN+L+ Q L  GDM
Sbjct: 83  ALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDTTNKLYTQDLAAGDM 142

Query: 145 FLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSGISDEVLAQAFKTDVVV 204
           F+FPKG+VHFQFN+     A A++AF SA  G VS+P TVF + I D VLA++FKTDV  
Sbjct: 143 FVFPKGMVHFQFNSG-NQPAMALSAFGSAAAGLVSVPVTVFGTNIDDAVLAKSFKTDVPT 202

Query: 205 IQSIKAGLAPP 207
           IQ +KAGL PP
Sbjct: 203 IQKLKAGLTPP 211

[Close]
BLAST of Cla003053 vs. Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-50
Identity = 107/188 (56.91%), Postives = 126/188 (67.02%), Query Frame = 1 

Query: 25  SGDPDPIVDYLTFPLGATAN--GTFFTFTGLRSAFTEF----PPNFKPTKATFVEFPALL 84
           +GDPD + DY+    G   N  G FFTFTG R  F       P +F  TKAT  EFPAL 
Sbjct: 25  AGDPDILTDYVIPANGNPMNITGDFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALN 84

Query: 85  SQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTNQLFNQTLQLGDMFLF 144
            QSVS A L +P  ++NPPHTHPRSAELLLVV G+L VGF+DTTN+L+ Q L  GDMF+F
Sbjct: 85  GQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDTTNKLYTQDLAAGDMFVF 144

Query: 145 PKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSGISDEVLAQAFKTDVVVIQS 204
           PKG+VHFQFN+     A A++AF SA PG V +P TVF +GI D VLA++FKTDV  I  
Sbjct: 145 PKGMVHFQFNSG-NQPAMALSAFGSAAPGVVPVPVTVFGTGIDDAVLAKSFKTDVPTILK 204

Query: 205 IKAGLAPP 207
           +KA L PP
Sbjct: 205 LKANLTPP 211

[Close]
BLAST of Cla003053 vs. Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-43
Identity = 98/212 (46.23%), Postives = 126/212 (59.43%), Query Frame = 1 

Query: 1   MAFLSTKSVTLFFFFILGIFSTAESGDPDPIVDYL----TFPLGATANGTFFTFTGLRSA 60
           M   S  SV+L    +L +  +A + DPD + D++    T P G   +G FFT+  L + 
Sbjct: 1   MMMSSRSSVSLGVLLLLAVILSAGAADPDILTDFVVPSDTDPSGI--DGAFFTYKNLVTG 60

Query: 61  FTEFPPNFKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQV 120
            +  P     TKAT  EFPALL QSVS A L + AG++NPPH HPR++ELL+VV G L V
Sbjct: 61  NSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLV 120

Query: 121 GFVDTTNQ--LFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPT 180
           G VD      ++ QTLQ GDMF+FPKG+VHFQFN      A A +AF SA PGT+SLP  
Sbjct: 121 GLVDAARNGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAA 180

Query: 181 VFTSGISDEVLAQAFKTDVVVIQSIKAGLAPP 207
           +F SGI D +L ++  TD   +  +K   APP
Sbjct: 181 LFGSGIDDTILDKSMHTDQATVDQLKQDQAPP 210

[Close]
BLAST of Cla003053 vs. Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 1 

Query: 16  ILGIFSTAESGDPDPIVDYLT-----------FPLGATANGTFFTFTGLRS-AFTEFPPN 75
           +L + + + +GDPD + D              FP  A      F F GL++   T  P  
Sbjct: 15  VLALAAPSLAGDPDMLQDVCVADLASPVKLNGFPCKANVTADDFFFAGLKNPGNTNNPAG 74

Query: 76  FKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTN 135
              T A    FP + +  VSMA + Y  G  NPPHTHPR+ E++ V+ G L+VGF+ T N
Sbjct: 75  SNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTAN 134

Query: 136 QLFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSG--IS 195
           +LF +T+  G++F+FP+GLVHFQ N      A  IAAF S   GT ++  T+F +   + 
Sbjct: 135 KLFTKTVTAGEVFVFPRGLVHFQQNRG-HGPAAVIAAFNSQLQGTQAIAATLFAAAPPVP 194

Query: 196 DEVLAQAFKTDVVVIQSIKA 202
            +VLA+AF+ DV  + +IKA
Sbjct: 195 SDVLAKAFRVDVPQVDAIKA 213

[Close]
BLAST of Cla003053 vs. Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 7.7e-29
Identity = 82/215 (38.14%), Postives = 111/215 (51.63%), Query Frame = 1 

Query: 7   KSVTLFFFFILGIFSTAESGDPDP-----IVDYLT------FPLGATANGT---FFTFTG 66
           K + +    +L   +TA + D D      + DY +      F     +N T   FF+   
Sbjct: 2   KLIAVLLLVVLATATTATAADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNLL 61

Query: 67  LRSAFTEFPPNFKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSG 126
           ++   T        T A     P L +  VSMA + Y  G LNPPHTHPR+ E++ V+ G
Sbjct: 62  VKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEG 121

Query: 127 SLQVGFVDTTNQLFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLP 186
            L VGF+ TTNQL  +T+  G+ F+FPKGLVHFQ N +    AT IA F S  PGTV++P
Sbjct: 122 QLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKN-NGWEPATVIAGFNSQLPGTVNIP 181

Query: 187 PTVF--TSGISDEVLAQAFKTDVVVIQSIKAGLAP 206
            T+F  T  + D VL +AF+     +Q IK+  AP
Sbjct: 182 LTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKFAP 215

[Close]
BLAST of Cla003053 vs. TrEMBL
Match: A0A0A0LSQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166250 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 160/186 (86.02%), Postives = 170/186 (91.40%), Query Frame = 1 

Query: 23  AESGDPDPIVDYLTFPLGATANGTFFTFTGLRSAFTEFPPNFKPTKATFVEFPALLSQSV 82
           A+S DPDP+VDYLT PL A  NGTFFTFTGLRSAFT+FP NFKPTKATF EFPALLSQSV
Sbjct: 2   AKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQSV 61

Query: 83  SMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTNQLFNQTLQLGDMFLFPKGL 142
           SMAILQYPAGS+NPPH+HPRSAELLLVVSGSLQVGFVDT NQ FNQTLQ+GD+FLFPKGL
Sbjct: 62  SMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGL 121

Query: 143 VHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSGISDEVLAQAFKTDVVVIQSIKAG 202
           VHFQ N DPRNSATAIA FASANPGTV+LP TVFTSGISDEVLA+AFKTDV VIQSI+AG
Sbjct: 122 VHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRAG 181

Query: 203 LAPPPS 209
           L PP S
Sbjct: 182 LTPPKS 187

[Close]
BLAST of Cla003053 vs. TrEMBL
Match: A0A067KE80_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12703 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.7e-63
Identity = 125/196 (63.78%), Postives = 152/196 (77.55%), Query Frame = 1 

Query: 14  FFILGIFSTA---ESGDPDPIVDYLTFPLGATANGTFFTFTGLRSAFT-EFPPNFKPTKA 73
           FF+L  F+T+   ++ DPD + D++  P   T +GTFFTFTG R  F    P  FK TKA
Sbjct: 2   FFLLAAFATSWLVQASDPDILSDFIA-PQNQTFDGTFFTFTGFRGIFNVPDPATFKVTKA 61

Query: 74  TFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTNQLFNQT 133
           +  EFPAL  QSVS A+LQYPAG +NPPHTHPR+AELL VV GSL+VGF+DTTN+L+ QT
Sbjct: 62  SMAEFPALNGQSVSYAVLQYPAGGVNPPHTHPRAAELLFVVLGSLEVGFIDTTNKLYTQT 121

Query: 134 LQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSGISDEVLAQAF 193
           LQLGD+F+FPKGLVH+Q+NADP+N A A +AF SAN GTVS+P TVFT+GI D+ LAQ+F
Sbjct: 122 LQLGDIFVFPKGLVHYQYNADPKNPAIAFSAFGSANAGTVSVPTTVFTTGIDDQTLAQSF 181

Query: 194 KTDVVVIQSIKAGLAP 206
           KTDV  IQ IKAGLAP
Sbjct: 182 KTDVPTIQKIKAGLAP 196

[Close]
BLAST of Cla003053 vs. TrEMBL
Match: D7TCS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00730 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.3e-62
Identity = 121/208 (58.17%), Postives = 156/208 (75.00%), Query Frame = 1 

Query: 4   LSTKSVTLFFFFILGIFSTAE---SGDPDPIVDYLTFPLGATANGTFFTFTGLRSAF-TE 63
           ++++ ++L F  ++  F+  +   +GDPD + D++  P  +  +G FFTFTG+R+     
Sbjct: 1   MASRIISLLFSLLVASFAIVQIAIAGDPDIVSDFIIPPNMSAVDGNFFTFTGIRALVGAP 60

Query: 64  FPPNFKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFV 123
            P  FK TKA+  EFPAL  QSVS A+L++P GS+NPPHTHPRSAELL ++ GSLQVGFV
Sbjct: 61  EPTTFKVTKASLAEFPALNGQSVSTAVLEFPPGSVNPPHTHPRSAELLFLLDGSLQVGFV 120

Query: 124 DTTNQLFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSG 183
           DTTN+LF QTLQ GDMF FPKGLVHFQ+N D +NSA A++AF SAN GTVSLP TVF +G
Sbjct: 121 DTTNKLFTQTLQAGDMFAFPKGLVHFQYNVDAKNSAVAVSAFGSANAGTVSLPNTVFATG 180

Query: 184 ISDEVLAQAFKTDVVVIQSIKAGLAPPP 208
           I D +LA++FKTDV  IQ+IKAGLAP P
Sbjct: 181 IDDNILAKSFKTDVATIQAIKAGLAPKP 208

[Close]
BLAST of Cla003053 vs. TrEMBL
Match: B9MYQ6_POPTR (Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0004s20570g PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.2e-62
Identity = 127/208 (61.06%), Postives = 157/208 (75.48%), Query Frame = 1 

Query: 5   STKSVTLFFFFILGIFSTAE---SGDPDPIVDYLTFPLGATA-NGTFFTFTGLRSAFTEF 64
           S  S   F   ++ +F  A+   +GDPD I D++  PL AT  +G FFTFTG+R+     
Sbjct: 3   SASSTFKFLSLLVALFVVAKMAIAGDPDIISDFIV-PLNATTVDGAFFTFTGMRALVGAQ 62

Query: 65  PPN-FKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFV 124
           PP+ FK +K +  EFPAL+ QSVS A+LQ+PAG+ NPPHTHPRSAELL +V GSLQVGFV
Sbjct: 63  PPSAFKVSKVSAAEFPALIGQSVSYAVLQFPAGTTNPPHTHPRSAELLFLVDGSLQVGFV 122

Query: 125 DTTNQLFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSG 184
           DTTN+LF QTLQ GDMF+FPKGLVHFQ+NAD +N A AI+AF SA+ GTVSLP T+FT+ 
Sbjct: 123 DTTNKLFTQTLQAGDMFIFPKGLVHFQYNADAQNPALAISAFGSASAGTVSLPTTLFTTS 182

Query: 185 ISDEVLAQAFKTDVVVIQSIKAGLAPPP 208
           I D +LA+AFKTDV  IQ++KAGLAP P
Sbjct: 183 IDDNILAKAFKTDVATIQALKAGLAPKP 209

[Close]
BLAST of Cla003053 vs. TrEMBL
Match: B9RPU7_RICCO (Nectarin-1, putative OS=Ricinus communis GN=RCOM_1541080 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-61
Identity = 124/207 (59.90%), Postives = 161/207 (77.78%), Query Frame = 1 

Query: 4   LSTKSVTLFFFFILGIFSTAESGDPDPIVDYLTFPLGATA---NGTFFTFTGLRS--AFT 63
           +++K ++    F+L    TA   DPD I D++  P  +TA   +G FFTFTG+RS  A  
Sbjct: 1   MASKLLSAVILFLLVAVVTAS--DPDIITDFI-IPANSTAAAIDGNFFTFTGMRSIVAGD 60

Query: 64  EFPPNFKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGF 123
           ++PP+FK TKA+  EFPAL  QSVS+A+L++PAGS+NPPHTHPRSAELL VV+GSL+VGF
Sbjct: 61  DYPPSFKVTKASMAEFPALNGQSVSLAVLEFPAGSVNPPHTHPRSAELLFVVAGSLEVGF 120

Query: 124 VDTTNQLFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTS 183
           +DTTN+L+ QTLQ GD+F+FPKGLVHFQ N+DP+  A A++AF SAN GTVS+P TVF +
Sbjct: 121 IDTTNKLYTQTLQPGDIFVFPKGLVHFQSNSDPKEPAAAVSAFGSANAGTVSVPSTVFAT 180

Query: 184 GISDEVLAQAFKTDVVVIQSIKAGLAP 206
           GI D+VLA+AFKTD+  IQ IK+GLAP
Sbjct: 181 GIDDDVLAKAFKTDIATIQKIKSGLAP 204

[Close]
BLAST of Cla003053 vs. NCBI nr
Match: gi|659072216|ref|XP_008463986.1| (PREDICTED: germin-like protein 9-3 [Cucumis melo])

HSP 1 Score: 357.5 bits (916), Expect = 1.6e-95
Identity = 180/210 (85.71%), Postives = 190/210 (90.48%), Query Frame = 1 

Query: 1   MAFLSTKSVTLFFFF--ILGIFSTAESGDPDPIVDYLTFPLGATANGTFFTFTGLRSAFT 60
           MAFLSTK  T FFFF  IL IFS A+SGDPDP+VDYLT PLGA  N TFFTFTGLRSAFT
Sbjct: 1   MAFLSTKPATFFFFFFFILSIFSFAKSGDPDPVVDYLTSPLGAIINSTFFTFTGLRSAFT 60

Query: 61  EFPPNFKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGF 120
           +FPPNFKPTKATF EFPALLSQSVSMAILQYPAGS+NPPHTHPRSAELLLVVSGSLQVGF
Sbjct: 61  DFPPNFKPTKATFNEFPALLSQSVSMAILQYPAGSINPPHTHPRSAELLLVVSGSLQVGF 120

Query: 121 VDTTNQLFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTS 180
           VDT+NQ FNQTLQ+GD+FLFPKGLVHFQFNADP+NSATAIA FASAN GTVSLP TVFTS
Sbjct: 121 VDTSNQFFNQTLQVGDLFLFPKGLVHFQFNADPQNSATAIATFASANAGTVSLPSTVFTS 180

Query: 181 GISDEVLAQAFKTDVVVIQSIKAGLAPPPS 209
           GISDEVLA+AFKTDV +IQSIK GL PP S
Sbjct: 181 GISDEVLAEAFKTDVAIIQSIKTGLTPPKS 210

[Close]
BLAST of Cla003053 vs. NCBI nr
Match: gi|449443636|ref|XP_004139583.1| (PREDICTED: putative germin-like protein 9-2 [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 1.5e-85
Identity = 160/186 (86.02%), Postives = 170/186 (91.40%), Query Frame = 1 

Query: 23  AESGDPDPIVDYLTFPLGATANGTFFTFTGLRSAFTEFPPNFKPTKATFVEFPALLSQSV 82
           A+S DPDP+VDYLT PL A  NGTFFTFTGLRSAFT+FP NFKPTKATF EFPALLSQSV
Sbjct: 2   AKSSDPDPVVDYLTSPLDAIINGTFFTFTGLRSAFTDFPSNFKPTKATFSEFPALLSQSV 61

Query: 83  SMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTNQLFNQTLQLGDMFLFPKGL 142
           SMAILQYPAGS+NPPH+HPRSAELLLVVSGSLQVGFVDT NQ FNQTLQ+GD+FLFPKGL
Sbjct: 62  SMAILQYPAGSINPPHSHPRSAELLLVVSGSLQVGFVDTANQFFNQTLQVGDLFLFPKGL 121

Query: 143 VHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSGISDEVLAQAFKTDVVVIQSIKAG 202
           VHFQ N DPRNSATAIA FASANPGTV+LP TVFTSGISDEVLA+AFKTDV VIQSI+AG
Sbjct: 122 VHFQLNVDPRNSATAIATFASANPGTVALPSTVFTSGISDEVLAEAFKTDVAVIQSIRAG 181

Query: 203 LAPPPS 209
           L PP S
Sbjct: 182 LTPPKS 187

[Close]
BLAST of Cla003053 vs. NCBI nr
Match: gi|643725319|gb|KDP34422.1| (hypothetical protein JCGZ_12703 [Jatropha curcas])

HSP 1 Score: 248.8 bits (634), Expect = 8.2e-63
Identity = 125/196 (63.78%), Postives = 152/196 (77.55%), Query Frame = 1 

Query: 14  FFILGIFSTA---ESGDPDPIVDYLTFPLGATANGTFFTFTGLRSAFT-EFPPNFKPTKA 73
           FF+L  F+T+   ++ DPD + D++  P   T +GTFFTFTG R  F    P  FK TKA
Sbjct: 2   FFLLAAFATSWLVQASDPDILSDFIA-PQNQTFDGTFFTFTGFRGIFNVPDPATFKVTKA 61

Query: 74  TFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTNQLFNQT 133
           +  EFPAL  QSVS A+LQYPAG +NPPHTHPR+AELL VV GSL+VGF+DTTN+L+ QT
Sbjct: 62  SMAEFPALNGQSVSYAVLQYPAGGVNPPHTHPRAAELLFVVLGSLEVGFIDTTNKLYTQT 121

Query: 134 LQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSGISDEVLAQAF 193
           LQLGD+F+FPKGLVH+Q+NADP+N A A +AF SAN GTVS+P TVFT+GI D+ LAQ+F
Sbjct: 122 LQLGDIFVFPKGLVHYQYNADPKNPAIAFSAFGSANAGTVSVPTTVFTTGIDDQTLAQSF 181

Query: 194 KTDVVVIQSIKAGLAP 206
           KTDV  IQ IKAGLAP
Sbjct: 182 KTDVPTIQKIKAGLAP 196

[Close]
BLAST of Cla003053 vs. NCBI nr
Match: gi|802621772|ref|XP_012076130.1| (PREDICTED: putative germin-like protein 9-2 [Jatropha curcas])

HSP 1 Score: 248.8 bits (634), Expect = 8.2e-63
Identity = 125/196 (63.78%), Postives = 152/196 (77.55%), Query Frame = 1 

Query: 14  FFILGIFSTA---ESGDPDPIVDYLTFPLGATANGTFFTFTGLRSAFT-EFPPNFKPTKA 73
           FF+L  F+T+   ++ DPD + D++  P   T +GTFFTFTG R  F    P  FK TKA
Sbjct: 11  FFLLAAFATSWLVQASDPDILSDFIA-PQNQTFDGTFFTFTGFRGIFNVPDPATFKVTKA 70

Query: 74  TFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFVDTTNQLFNQT 133
           +  EFPAL  QSVS A+LQYPAG +NPPHTHPR+AELL VV GSL+VGF+DTTN+L+ QT
Sbjct: 71  SMAEFPALNGQSVSYAVLQYPAGGVNPPHTHPRAAELLFVVLGSLEVGFIDTTNKLYTQT 130

Query: 134 LQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSGISDEVLAQAF 193
           LQLGD+F+FPKGLVH+Q+NADP+N A A +AF SAN GTVS+P TVFT+GI D+ LAQ+F
Sbjct: 131 LQLGDIFVFPKGLVHYQYNADPKNPAIAFSAFGSANAGTVSVPTTVFTTGIDDQTLAQSF 190

Query: 194 KTDVVVIQSIKAGLAP 206
           KTDV  IQ IKAGLAP
Sbjct: 191 KTDVPTIQKIKAGLAP 205

[Close]
BLAST of Cla003053 vs. NCBI nr
Match: gi|225464908|ref|XP_002273453.1| (PREDICTED: putative germin-like protein 9-2 [Vitis vinifera])

HSP 1 Score: 245.4 bits (625), Expect = 9.0e-62
Identity = 121/208 (58.17%), Postives = 156/208 (75.00%), Query Frame = 1 

Query: 4   LSTKSVTLFFFFILGIFSTAE---SGDPDPIVDYLTFPLGATANGTFFTFTGLRSAF-TE 63
           ++++ ++L F  ++  F+  +   +GDPD + D++  P  +  +G FFTFTG+R+     
Sbjct: 1   MASRIISLLFSLLVASFAIVQIAIAGDPDIVSDFIIPPNMSAVDGNFFTFTGIRALVGAP 60

Query: 64  FPPNFKPTKATFVEFPALLSQSVSMAILQYPAGSLNPPHTHPRSAELLLVVSGSLQVGFV 123
            P  FK TKA+  EFPAL  QSVS A+L++P GS+NPPHTHPRSAELL ++ GSLQVGFV
Sbjct: 61  EPTTFKVTKASLAEFPALNGQSVSTAVLEFPPGSVNPPHTHPRSAELLFLLDGSLQVGFV 120

Query: 124 DTTNQLFNQTLQLGDMFLFPKGLVHFQFNADPRNSATAIAAFASANPGTVSLPPTVFTSG 183
           DTTN+LF QTLQ GDMF FPKGLVHFQ+N D +NSA A++AF SAN GTVSLP TVF +G
Sbjct: 121 DTTNKLFTQTLQAGDMFAFPKGLVHFQYNVDAKNSAVAVSAFGSANAGTVSLPNTVFATG 180

Query: 184 ISDEVLAQAFKTDVVVIQSIKAGLAPPP 208
           I D +LA++FKTDV  IQ+IKAGLAP P
Sbjct: 181 IDDNILAKSFKTDVATIQAIKAGLAPKP 208

The following BLAST results are available for this feature:
BLAST of Cla003053 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL93_ORYSJ8.5e-5258.12Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=... [more]
GL92_ORYSJ1.2e-5056.91Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600... [more]
GL91_ORYSJ1.9e-4346.23Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=... [more]
GL11_ORYSJ1.2e-2938.00Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1[more]
RHRE_PEA7.7e-2938.14Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2[more]
BLAST of Cla003053 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSQ3_CUCSA1.1e-8586.02Uncharacterized protein OS=Cucumis sativus GN=Csa_1G166250 PE=3 SV=1[more]
A0A067KE80_JATCU5.7e-6363.78Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12703 PE=3 SV=1[more]
D7TCS5_VITVI6.3e-6258.17Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0080g00730 PE=3 SV=... [more]
B9MYQ6_POPTR8.2e-6261.06Germin-like protein 1 OS=Populus trichocarpa GN=POPTR_0004s20570g PE=3 SV=1[more]
B9RPU7_RICCO1.1e-6159.90Nectarin-1, putative OS=Ricinus communis GN=RCOM_1541080 PE=3 SV=1[more]
BLAST of Cla003053 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072216|ref|XP_008463986.1|1.6e-9585.71PREDICTED: germin-like protein 9-3 [Cucumis melo][more]
gi|449443636|ref|XP_004139583.1|1.5e-8586.02PREDICTED: putative germin-like protein 9-2 [Cucumis sativus][more]
gi|643725319|gb|KDP34422.1|8.2e-6363.78hypothetical protein JCGZ_12703 [Jatropha curcas][more]
gi|802621772|ref|XP_012076130.1|8.2e-6363.78PREDICTED: putative germin-like protein 9-2 [Jatropha curcas][more]
gi|225464908|ref|XP_002273453.1|9.0e-6258.17PREDICTED: putative germin-like protein 9-2 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
Vocabulary: Molecular Function
TermDefinition
GO:0030145manganese ion binding
GO:0045735nutrient reservoir activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044710 single-organism metabolic process
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0008150 biological_process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0098869 cellular oxidant detoxification
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005618 cell wall
cellular_component GO:0005575 cellular_component
cellular_component GO:0048046 apoplast
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0020037 heme binding
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0030145 manganese ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003053Cla003053.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 128..148
score: 1.1E-21coord: 162..177
score: 1.1E-21coord: 98..118
score: 1.1
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 68..192
score: 8.7
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 62..197
score: 2.4
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 67..202
score: 5.55
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 48..201
score: 1.9
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 2..204
score: 4.6
NoneNo IPR availablePANTHERPTHR31238:SF47SUBFAMILY NOT NAMEDcoord: 2..204
score: 4.6