Csa1G164710 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G164710
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUbiquitin carboxyl-terminal hydrolase-like protein; contains IPR021099 (Plant organelle RNA recognition domain)
LocationChr1 : 10288889 .. 10290591 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGAAAATCTATGTTCCTACGCCTAAATCGATACCCCAACTCTTACCCAATTTCTGAAACACATGTTTTTGATCATAAGAAGTCGGCTTTTCTATGGGTTTTGATGAGGCACAAATCTAGCGGTGGAATGAGACCAAAGAGAAAAATCTATTATAGAGTTGCTGAACTGGACAAAGTTATGGACTTGCAAAAAAAGCCATCCCTTATACTAAAGCTTATTAACATTATCCAATCTCAAAAGAACAAATTTATATTATTGAGGGACCTCGAGAAAGAAGTAGGATTTGTCCAAAAATGGAACTTCATGGCTGTTATTGAGAAGTACTCTTCGATCTTCTATGTTGGTTCTGGAAGTAGTAGAGTGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAATGATTGCTAGTGAAGAAGATAAGGTAAAGAGTGCAATGGAACCAATCTTAGTAAAGAATTTGAGGAAGCTGTTGATGCTGTCTGTTGATTGTCGAGTACCGCTCGAGAATATAGAATTCATTGCATCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTAAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCTCATCTACATTTGGAAAATTGGGATTCTTCACTTGCAATTTGTGCTCGAGAGGATAGATTTGCTAAAGCTAGAGATTTATCTTCTTGTGGATATGGAAAAAGAGTTAGAATCTCAAAAGATGGCAACTTTTCTGGTCCTTTTGCATTCAAGATGTGTTTTCCTTCAGGCTTTAGGCCAAACACGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCCCCGTACTTGAACGCAAGGAGATTTGATGTAGCTGATCCGAAGACAAGAAAGAGAGTGGTCGCAGTTCTTCACGAGTTTCTAAGTTTGACAATGGAAAAAAGAATGACTTCAACACAATTGGATGCGTTTCATAGGGAGTTTCTTCTACCATCTAAACTATTGCTTTGCTTAGTAAAGCATCAGGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACCGTATTTCTGAAAGAAGGCTATGAAGGGTCAATTTTGGTTGATAAATGTCCTTTGCTGTTGCACTCTGATAGATTTCTTTCACTCTGTGGTAGGAGGGACATGAGTTGCAATTCACACCAAGTTAGTTTATAATCACATATTTATTGGAAAAAAATGCATGAAAAGTTAAAGGAAAGCTTAATCCTCGTTGGATTTCCCAAGATATGAAAGTATTGAAGGTCGTTGTTGTAGTTTGCTGTCTTCATACACCAGTTAAAAGAAGGATGTAAAGAGGAAATAGCAAGGTATTCTCGTAAGTAAGTTTACCGGGTAACTGTTGGGGTTGGTGTATACATTATAATATTTTTGGCAAAGATAGGAGTTGAGTTGGGATTCCTGTACATCTGAAGATGTTTGACATAATTTAGATTTCACAAAATCTTCTTAAAAACTCCTTTGATTAGCTAAAGTGAATTTGTCTCAAACGATAATTATCTTAAGTTAAGATCTTCCTTTGGTGCTTAGCTCATTGAAGTTTGAATGAATAGCCATGAGCGACTTCAAAAACAATGTGTGAATCGGTGTATTTTCCCCTTGGACTGCCCTTATGTTGCTATGATGAAGGATCCTTGACCACTTATTCTTTCATTAGC

mRNA sequence

ATGAATGGAAAATCTATGTTCCTACGCCTAAATCGATACCCCAACTCTTACCCAATTTCTGAAACACATGTTTTTGATCATAAGAAGTCGGCTTTTCTATGGGTTTTGATGAGGCACAAATCTAGCGGTGGAATGAGACCAAAGAGAAAAATCTATTATAGAGTTGCTGAACTGGACAAAGTTATGGACTTGCAAAAAAAGCCATCCCTTATACTAAAGCTTATTAACATTATCCAATCTCAAAAGAACAAATTTATATTATTGAGGGACCTCGAGAAAGAAGTAGGATTTGTCCAAAAATGGAACTTCATGGCTGTTATTGAGAAGTACTCTTCGATCTTCTATGTTGGTTCTGGAAGTAGTAGAGTGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAATGATTGCTAGTGAAGAAGATAAGGTAAAGAGTGCAATGGAACCAATCTTAGTAAAGAATTTGAGGAAGCTGTTGATGCTGTCTGTTGATTGTCGAGTACCGCTCGAGAATATAGAATTCATTGCATCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTAAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCTCATCTACATTTGGAAAATTGGGATTCTTCACTTGCAATTTGTGCTCGAGAGGATAGATTTGCTAAAGCTAGAGATTTATCTTCTTGTGGATATGGAAAAAGAGTTAGAATCTCAAAAGATGGCAACTTTTCTGGTCCTTTTGCATTCAAGATGTGTTTTCCTTCAGGCTTTAGGCCAAACACGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCCCCGTACTTGAACGCAAGGAGATTTGATGTAGCTGATCCGAAGACAAGAAAGAGAGTGGTCGCAGTTCTTCACGAGTTTCTAAGTTTGACAATGGAAAAAAGAATGACTTCAACACAATTGGATGCGTTTCATAGGGAGTTTCTTCTACCATCTAAACTATTGCTTTGCTTAGTAAAGCATCAGGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACCGTATTTCTGAAAGAAGGCTATGAAGGGTCAATTTTGGTTGATAAATGTCCTTTGCTGTTGCACTCTGATAGATTTCTTTCACTCTGTGGTAGGAGGGACATGAGTTGCAATTCACACCAAGTTAGTTTATAA

Coding sequence (CDS)

ATGAATGGAAAATCTATGTTCCTACGCCTAAATCGATACCCCAACTCTTACCCAATTTCTGAAACACATGTTTTTGATCATAAGAAGTCGGCTTTTCTATGGGTTTTGATGAGGCACAAATCTAGCGGTGGAATGAGACCAAAGAGAAAAATCTATTATAGAGTTGCTGAACTGGACAAAGTTATGGACTTGCAAAAAAAGCCATCCCTTATACTAAAGCTTATTAACATTATCCAATCTCAAAAGAACAAATTTATATTATTGAGGGACCTCGAGAAAGAAGTAGGATTTGTCCAAAAATGGAACTTCATGGCTGTTATTGAGAAGTACTCTTCGATCTTCTATGTTGGTTCTGGAAGTAGTAGAGTGCCCCCTTATGTTAGGCTCTCCAATAAAGCTGAAATGATTGCTAGTGAAGAAGATAAGGTAAAGAGTGCAATGGAACCAATCTTAGTAAAGAATTTGAGGAAGCTGTTGATGCTGTCTGTTGATTGTCGAGTACCGCTCGAGAATATAGAATTCATTGCATCTGAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTAAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCTCATCTACATTTGGAAAATTGGGATTCTTCACTTGCAATTTGTGCTCGAGAGGATAGATTTGCTAAAGCTAGAGATTTATCTTCTTGTGGATATGGAAAAAGAGTTAGAATCTCAAAAGATGGCAACTTTTCTGGTCCTTTTGCATTCAAGATGTGTTTTCCTTCAGGCTTTAGGCCAAACACGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCTTCCCCGTACTTGAACGCAAGGAGATTTGATGTAGCTGATCCGAAGACAAGAAAGAGAGTGGTCGCAGTTCTTCACGAGTTTCTAAGTTTGACAATGGAAAAAAGAATGACTTCAACACAATTGGATGCGTTTCATAGGGAGTTTCTTCTACCATCTAAACTATTGCTTTGCTTAGTAAAGCATCAGGGAATCTTCTACATCACTAATAAAGGTGCAAGGAGTACCGTATTTCTGAAAGAAGGCTATGAAGGGTCAATTTTGGTTGATAAATGTCCTTTGCTGTTGCACTCTGATAGATTTCTTTCACTCTGTGGTAGGAGGGACATGAGTTGCAATTCACACCAAGTTAGTTTATAA

Protein sequence

MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQVSL*
Homology
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BLAST of Csa1G164710 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.9e-34
Identity = 119/367 (32.43%), Postives = 190/367 (51.77%), Query Frame = 1 

Query: 35  VLMRHKSSGGMRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFI---LLRDL 94
           +L++  S     PK++   R    D  M+++KK   ++K  ++I SQ N  I   LL  L
Sbjct: 29  ILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTL 88

Query: 95  EKEVGFVQKWNFM-AVIEKYSSIFYVGSGSSRVPPYVRLSNKA-EMIASEEDKVKSAMEP 154
            + +G   K +   A + K+  +F +     +   Y RL+ KA + I  E + V   + P
Sbjct: 89  ARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI-P 148

Query: 155 ILVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKA--- 214
             V  LRKL+M+S   R+ LE++    +E GLP DF+ S+I K+P+FF +  +DG+    
Sbjct: 149 DAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL--IDGEETRD 208

Query: 215 -HLHLENWDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRP 274
            ++ +   D +L+ICA E    + R++    Y  +   ++D  FS    F + FP GF+ 
Sbjct: 209 KYIEIVEKDPNLSICAIE----RVREIE---YRTKGIDAEDVRFS----FVVNFPPGFKI 268

Query: 275 NTSYLEHLERWQKMDFPSPYLNARRFDV----ADPKTRKRVVAVLHEFLSLTMEKRMTST 334
              +   + +WQ++ + SPY +   +D+    A  +  KR VA +HE LSLT+EK++T  
Sbjct: 269 GKYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLE 328

Query: 335 QLDAFHREFLLPSKLLLCLVKHQGIFYIT---NKGARSTVFLKEGYEGSILVDKCPLLLH 386
           ++  F     LP KL   L++HQGIFYI+   N G   TVFL+EGY+   LV+   + L 
Sbjct: 329 RIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLA 381

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BLAST of Csa1G164710 vs. TrEMBL
Match: A0A0A0LVT2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G164710 PE=4 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 4.7e-231
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1 

Query: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60
           MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120
           VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180
           SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR 240
           LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR 240

Query: 241 VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300
           VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK
Sbjct: 241 VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360
           RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

Query: 361 KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQVSL 401
           KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQVSL
Sbjct: 361 KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQVSL 400

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BLAST of Csa1G164710 vs. TrEMBL
Match: M5WG21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007448mg PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 8.8e-153
Identity = 270/364 (74.18%), Postives = 311/364 (85.44%), Query Frame = 1 

Query: 33  LWVLMRHKSSGGMRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLE 92
           +WV ++HKSSGG RPKRK+Y+RV ELDKVMD QKKP+LIL+L +IIQSQK++ +LLRDLE
Sbjct: 1   MWVPVKHKSSGGRRPKRKVYHRVHELDKVMDFQKKPALILQLKSIIQSQKHQSLLLRDLE 60

Query: 93  KEVGFVQKWNFMAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILV 152
           KEVGFVQKWNFMA IEKY SIFYVG G+ R PP+V L+ KA+ +A EE + K  MEPILV
Sbjct: 61  KEVGFVQKWNFMAAIEKYPSIFYVGGGN-RTPPFVTLAEKAKKVAREEAEAKDLMEPILV 120

Query: 153 KNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLEN 212
           KNLRKLLMLSVDCRVPLENIEFI SELGLP DFK SL+PKYPE FSVKEV+GK HLHLEN
Sbjct: 121 KNLRKLLMLSVDCRVPLENIEFIESELGLPNDFKKSLLPKYPEIFSVKEVNGKLHLHLEN 180

Query: 213 WDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEH 272
           WDSS+A+ ARE++       +  G G +VRISKDGNF GP AF+M FP+GFRPNTSYLE 
Sbjct: 181 WDSSIAVTAREEQLGGEGISAPSGLGNKVRISKDGNFLGPHAFRMSFPAGFRPNTSYLEQ 240

Query: 273 LERWQKMDFPSPYLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLL 332
           LERWQKMDFPSPYLNARRFD+ADPK RKRVVAVLHE LSLTM+KRMTS QLDAFH E+ L
Sbjct: 241 LERWQKMDFPSPYLNARRFDIADPKVRKRVVAVLHELLSLTMQKRMTSAQLDAFHSEYFL 300

Query: 333 PSKLLLCLVKHQGIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDM- 392
           PSKLLLCL+KH GIFYITNKGARSTVFLKE Y+G  L++KCPLLL +D+F++L GRR++ 
Sbjct: 301 PSKLLLCLIKHPGIFYITNKGARSTVFLKEAYDGLNLINKCPLLLFNDKFVALSGRREIN 360

Query: 393 SCNS 396
           SC +
Sbjct: 361 SCKT 363

[Close]
BLAST of Csa1G164710 vs. TrEMBL
Match: V4T294_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020719mg PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 7.7e-149
Identity = 263/368 (71.47%), Postives = 313/368 (85.05%), Query Frame = 1 

Query: 33  LWVLMRHKSSGGMRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLE 92
           +WV M+ KS+GG R K+KIY RV ELD+VM+LQKKPSLIL+L +IIQSQK K  LLRDLE
Sbjct: 1   MWVPMKQKSTGGWRSKKKIYRRVHELDRVMELQKKPSLILQLKSIIQSQKQK-CLLRDLE 60

Query: 93  KEVGFVQKWNFMAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILV 152
           K+VGFV KWNFMAVIEKY SIF+VG GS+R PP+V L+ KAE IA EE+  +  MEPILV
Sbjct: 61  KQVGFVHKWNFMAVIEKYPSIFHVGGGSNRKPPFVTLTQKAEKIADEEEVARELMEPILV 120

Query: 153 KNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLEN 212
           KNLRKLLM+SVDCRVPLE IEFI SELGLP DFK + +PKY +FF+VK+ +GK +L+L+N
Sbjct: 121 KNLRKLLMMSVDCRVPLEKIEFIESELGLPQDFKKAFLPKYDDFFTVKDTNGKPYLYLQN 180

Query: 213 WDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEH 272
           WD+SLA+ ARE+R A+   L S G  KRVRI+KDGN+SGP AFK+CFP+GFRPNTSYLE 
Sbjct: 181 WDASLAVTAREERLAREGVLDSAGAQKRVRITKDGNYSGPNAFKICFPAGFRPNTSYLEQ 240

Query: 273 LERWQKMDFPSPYLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLL 332
           LERWQ+M+FPSPYLNARRF++ADPK RKRVVAVLHE LSLTMEKRMTS QLDAFH E++L
Sbjct: 241 LERWQRMEFPSPYLNARRFELADPKARKRVVAVLHELLSLTMEKRMTSAQLDAFHSEYML 300

Query: 333 PSKLLLCLVKHQGIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDM- 392
           P KLLLCL+KH GIFYITNKGARSTV LKE Y+GS L+DKCPLLL++D+F++L GRR++ 
Sbjct: 301 PHKLLLCLIKHHGIFYITNKGARSTVLLKEAYDGSNLIDKCPLLLYNDKFVALSGRREIN 360

Query: 393 SCNSHQVS 400
           SCN   +S
Sbjct: 361 SCNGKSLS 367

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BLAST of Csa1G164710 vs. TrEMBL
Match: A0A067JMI5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22647 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 6.5e-148
Identity = 265/363 (73.00%), Postives = 310/363 (85.40%), Query Frame = 1 

Query: 33  LWVLMRHKSSGGMRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLE 92
           +WV ++ KSSGG RPK+KIY+RV ELD+VMDLQKKPSLIL L +IIQSQK++ +LLRDLE
Sbjct: 1   MWVSVKEKSSGGRRPKKKIYHRVHELDRVMDLQKKPSLILHLKSIIQSQKHQCLLLRDLE 60

Query: 93  KEVGFVQKWNFMAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILV 152
           K+VGFVQKWNFMAV+EKY SIF VG GS R PP+V L+ KA  IA++E + + +MEPILV
Sbjct: 61  KQVGFVQKWNFMAVLEKYPSIFRVGGGSDRTPPFVTLTEKAIKIANQEHEARESMEPILV 120

Query: 153 KNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLEN 212
           +NLRKLLM+SVDCRVPLE IEFI +ELGLP  FK SLIPKYPE+FSVK V+GKA+LHLEN
Sbjct: 121 RNLRKLLMMSVDCRVPLEKIEFIGNELGLPQGFKNSLIPKYPEYFSVKNVNGKAYLHLEN 180

Query: 213 WDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEH 272
           WDSSLAI ARE+R +     +S    K+VRISKDGNF GPFAF+M FP+GFRPN SYLE 
Sbjct: 181 WDSSLAITAREERLSLEGVSASNPPKKKVRISKDGNFLGPFAFRMRFPAGFRPNASYLEE 240

Query: 273 LERWQKMDFPSPYLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLL 332
           LERWQ+++FPSPYLNARRFD ADPK RKRVVAVLHE LSLT+EKRMTS QLDAFH E LL
Sbjct: 241 LERWQRLEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTIEKRMTSLQLDAFHSESLL 300

Query: 333 PSKLLLCLVKHQGIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDMS 392
           PS+LLLCLVK+ GIFYITNKGARSTVFLKE Y+GS L+DKCPLLL +D+F++L GRR+ +
Sbjct: 301 PSRLLLCLVKNPGIFYITNKGARSTVFLKEAYDGSNLIDKCPLLLFNDKFVALSGRRESN 360

Query: 393 -CN 395
            CN
Sbjct: 361 FCN 363

[Close]
BLAST of Csa1G164710 vs. TrEMBL
Match: A0A061F8V2_THECC (Ubiquitin carboxyl-terminal hydrolase family protein isoform 1 OS=Theobroma cacao GN=TCM_032397 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 5.5e-147
Identity = 264/375 (70.40%), Postives = 314/375 (83.73%), Query Frame = 1 

Query: 28  KKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFIL 87
           KKS  ++V +R  S+GG RPK+KIY+R  +LDKVMDLQKKPSLIL+L +IIQSQ  + +L
Sbjct: 17  KKSDSMFVSVRQISTGGKRPKKKIYHRDYQLDKVMDLQKKPSLILQLKSIIQSQNQQCLL 76

Query: 88  LRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAM 147
           LRDLEKEVGFV KWNFM++IEKY SIF+ G GS +  P+V L+ KAE IASEE + +  M
Sbjct: 77  LRDLEKEVGFVAKWNFMSIIEKYPSIFHAGGGSGKQLPFVTLTRKAEKIASEEREARVLM 136

Query: 148 EPILVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAH 207
           E ILVKNLRKLLMLS+DCRVPLE +EF  SELGLP DFK SLI KYPE+FS+K+V+G+A+
Sbjct: 137 ESILVKNLRKLLMLSIDCRVPLEKVEFFGSELGLPKDFKKSLIWKYPEYFSIKDVNGRAY 196

Query: 208 LHLENWDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNT 267
           L+LENWDSSLA+ ARE+RFA+   L+S G  K+VRI KDGN+ GPFAFKMCF +GFRPN 
Sbjct: 197 LNLENWDSSLAVTAREERFAREGVLASAGGLKKVRIMKDGNYLGPFAFKMCFAAGFRPNK 256

Query: 268 SYLEHLERWQKMDFPSPYLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFH 327
           SYLE L+RWQKM+FPSPYLNARRFDVADPK RKRVVAVLHE LSLTMEKRMTS QLDAFH
Sbjct: 257 SYLEELQRWQKMEFPSPYLNARRFDVADPKARKRVVAVLHELLSLTMEKRMTSAQLDAFH 316

Query: 328 REFLLPSKLLLCLVKHQGIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCG 387
            E+LLPSKL+LCL+KH GIFYITNKGARSTVFLKE Y+G+ LVDKCP+L+ +D+F++L G
Sbjct: 317 SEYLLPSKLVLCLIKHHGIFYITNKGARSTVFLKEAYDGTRLVDKCPMLMFNDKFVTLSG 376

Query: 388 RRDM----SCNSHQV 399
           R ++    S NS QV
Sbjct: 377 RNEISSFNSVNSSQV 391

[Close]
BLAST of Csa1G164710 vs. TAIR10
Match: AT1G79120.1 (AT1G79120.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 497.7 bits (1280), Expect = 6.9e-141
Identity = 247/367 (67.30%), Postives = 295/367 (80.38%), Query Frame = 1 

Query: 34  WVLMRHKSSGG-MRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLE 93
           +V +RHKS GG  RPK+K+Y+RV +LDK +DL KKPSLIL+L +IIQ+QK+  +LLRDLE
Sbjct: 43  FVQVRHKSGGGGWRPKQKVYHRVHDLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLE 102

Query: 94  KEVGFVQKWNFMAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILV 153
           K VGFV KWN MA IEKY +IFYVG G    PP+V L+ KA+ IA+EE +   +MEPILV
Sbjct: 103 KHVGFVHKWNLMAAIEKYPTIFYVGGGHKE-PPFVMLTEKAKKIAAEESEATESMEPILV 162

Query: 154 KNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLEN 213
            NLRKLLM+SVDCRVPLE +EFI S +GLP DFK++LIPKY EFFS+K ++GK +L LEN
Sbjct: 163 NNLRKLLMMSVDCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLEN 222

Query: 214 WDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEH 273
           WDSSLAI AREDR ++     S G  KRVRI+KDGNF G  AFK+ FP GFRPN SYLE 
Sbjct: 223 WDSSLAITAREDRLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLEE 282

Query: 274 LERWQKMDFPSPYLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLL 333
            E+WQKM+FPSPYLNARRFD ADPK RKRVVAVLHE LSLTMEKR+T  QLDAFH E+LL
Sbjct: 283 FEKWQKMEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYLL 342

Query: 334 PSKLLLCLVKHQGIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDMS 393
           PS+L+LCL+KHQGIFYITNKGAR TVFLK+ Y GS L++KCPLLL  DRF++LCGR++++
Sbjct: 343 PSRLILCLIKHQGIFYITNKGARGTVFLKDAYAGSNLIEKCPLLLFHDRFVALCGRKEVN 402

Query: 394 CNSHQVS 400
            ++   S
Sbjct: 403 LSNEMQS 408

[Close]
BLAST of Csa1G164710 vs. TAIR10
Match: AT5G21970.1 (AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 178.3 bits (451), Expect = 9.2e-45
Identity = 118/397 (29.72%), Postives = 200/397 (50.38%), Query Frame = 1 

Query: 1   MNGKSMFLRLNRYPNSYPI----SETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVA 60
           M G   +L+  R  N++ +     E +V  + +S+F  V +R  +S      R    RV 
Sbjct: 1   MGGLRCWLQFYRNGNAHNVFAIMPERNVL-YGESSFRRVWVRFMTSSKRVQDRSREKRVQ 60

Query: 61  ELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLE---KEVGFVQKWNFMAVIEKYSSI 120
           EL+   +  K  S ++ L+ +++ +++  + +R  E   +++   +       I K   +
Sbjct: 61  ELEIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKISDFIRKSPKL 120

Query: 121 FYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIE 180
           F +      V  +  L+   E +  E DK+         +++ + LM+SVD ++PL+ I 
Sbjct: 121 FELYKDQRGVL-WCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVDKKLPLDKIV 180

Query: 181 FIASELGLPCDFKTSLIPKYPEFFSVKEV-DGKAHLHLENWDSSLAICAREDRFAKARDL 240
               + GLP DF+ + +  +P+ F V ++ DG+ +L L +W+ + AI   E +     + 
Sbjct: 181 HFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAITELEKKTLGITE- 240

Query: 241 SSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFD 300
             C +       K G  S   AF M FP  ++    Y   +E +QK  + SPY +AR  +
Sbjct: 241 -DCEH-------KPGMLS--LAFPMKFPPSYKKMYRYRGKIEHFQKRSYLSPYADARGLE 300

Query: 301 VADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNK 360
               +  KR +AV+HE LS T+EKR+ +  L  F REF++P KL+   +KH GIFY++ +
Sbjct: 301 AGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGIFYVSER 360

Query: 361 GARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRR 390
           G R +VFL EGYEG  L++KCPL+L  ++ L   G R
Sbjct: 361 GKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYR 384

[Close]
BLAST of Csa1G164710 vs. TAIR10
Match: AT4G01037.1 (AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 166.8 bits (421), Expect = 2.8e-41
Identity = 110/352 (31.25%), Postives = 181/352 (51.42%), Query Frame = 1 

Query: 45  MRPKRKIYYRVAEL--DKVMDLQKKPSLILKLINIIQSQKNKFILLRDLEK---EVGFVQ 104
           + P R    R  EL  D V+   KK  L+L +  I+ SQ ++ + LR L K   ++G  +
Sbjct: 69  VEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKK 128

Query: 105 KWNFMAVIEKYSSIFYV---GSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLR 164
           +  F+A++ KY  +F +   G+ S R     +++++AE +  +E ++++ +E +LV  LR
Sbjct: 129 RRRFIALLRKYPGVFEIVEEGAYSLRF----KMTSEAERLYLDEMRIRNELEDVLVVKLR 188

Query: 165 KLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSS 224
           KL+M+S+D R+ LE I  + ++LGLP +F+ ++  +YP++F V        L L +WD  
Sbjct: 189 KLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPE 248

Query: 225 LAICAREDRFAKARDLSSCGYGKRVRISKDGNF---SGPFAFKMCFPSGFRPNTSYLEHL 284
           LA+ A E     + D        R R S++ N      P   ++  P G   + S    +
Sbjct: 249 LAVSAAE----LSED------DNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKI 308

Query: 285 ERWQKMDFPSPYLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLP 344
            +++ M + SPY +         +  K    V+HE LSLT EKR     L  F  EF   
Sbjct: 309 SQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFS 368

Query: 345 SKLLLCLVKHQGIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSL 386
            +L   L++H  +FY++ KG R +VFL+E Y  S L+DK PL L  ++  +L
Sbjct: 369 QQLRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRAL 406

[Close]
BLAST of Csa1G164710 vs. TAIR10
Match: AT4G33495.1 (AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 146.4 bits (368), Expect = 3.9e-35
Identity = 119/367 (32.43%), Postives = 190/367 (51.77%), Query Frame = 1 

Query: 35  VLMRHKSSGGMRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFI---LLRDL 94
           +L++  S     PK++   R    D  M+++KK   ++K  ++I SQ N  I   LL  L
Sbjct: 29  ILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTL 88

Query: 95  EKEVGFVQKWNFM-AVIEKYSSIFYVGSGSSRVPPYVRLSNKA-EMIASEEDKVKSAMEP 154
            + +G   K +   A + K+  +F +     +   Y RL+ KA + I  E + V   + P
Sbjct: 89  ARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI-P 148

Query: 155 ILVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKA--- 214
             V  LRKL+M+S   R+ LE++    +E GLP DF+ S+I K+P+FF +  +DG+    
Sbjct: 149 DAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRL--IDGEETRD 208

Query: 215 -HLHLENWDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRP 274
            ++ +   D +L+ICA E    + R++    Y  +   ++D  FS    F + FP GF+ 
Sbjct: 209 KYIEIVEKDPNLSICAIE----RVREIE---YRTKGIDAEDVRFS----FVVNFPPGFKI 268

Query: 275 NTSYLEHLERWQKMDFPSPYLNARRFDV----ADPKTRKRVVAVLHEFLSLTMEKRMTST 334
              +   + +WQ++ + SPY +   +D+    A  +  KR VA +HE LSLT+EK++T  
Sbjct: 269 GKYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLE 328

Query: 335 QLDAFHREFLLPSKLLLCLVKHQGIFYIT---NKGARSTVFLKEGYEGSILVDKCPLLLH 386
           ++  F     LP KL   L++HQGIFYI+   N G   TVFL+EGY+   LV+   + L 
Sbjct: 329 RIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLA 381

[Close]
BLAST of Csa1G164710 vs. TAIR10
Match: AT5G48040.1 (AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-32
Identity = 102/357 (28.57%), Postives = 169/357 (47.34%), Query Frame = 1 

Query: 57  ELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDL---EKEVGFVQKWNFMAVIEKYSSI 116
           ELD V+  +K    +  L+++I +  +  + +  L     ++G  Q+    A I +Y +I
Sbjct: 44  ELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAFIRRYPNI 103

Query: 117 F----YVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPL 176
           F    Y  S  + VP +       ++   E D  +     +LV+ L KLLML+ +  + L
Sbjct: 104 FVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVR-LCKLLMLTCERTLSL 163

Query: 177 ENIEFIASELGLPCDFKTSLIPKYPEFFSV----KEVDGKAHLHLENWDSSLAICAREDR 236
            +I+ +  +LGLP D++ SLI K+P+ FS+     ++DG   L L +WD  LA+      
Sbjct: 164 HSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG---LKLIHWDEHLAV------ 223

Query: 237 FAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPY 296
                         ++++ +D       AF + F  GF      +E L+ WQ++ + SPY
Sbjct: 224 -------------SQMQLREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPYTSPY 283

Query: 297 LNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQG 356
           ++A   D     + KR V V HE L LT+ K+     +    + F LP K      +H G
Sbjct: 284 VDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPG 343

Query: 357 IFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLC--GRRDMSCNSHQVSL 401
           IFYI+ K    TV L+E Y+   L++K PL+   ++F ++   G  D S   +Q S+
Sbjct: 344 IFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRSRGLYQKSV 377

[Close]
BLAST of Csa1G164710 vs. NCBI nr
Match: gi|449443632|ref|XP_004139581.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 808.1 bits (2086), Expect = 6.7e-231
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1 

Query: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60
           MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120
           VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180
           SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR 240
           LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR 240

Query: 241 VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300
           VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK
Sbjct: 241 VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360
           RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

Query: 361 KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQVSL 401
           KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQVSL
Sbjct: 361 KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQVSL 400

[Close]
BLAST of Csa1G164710 vs. NCBI nr
Match: gi|659071667|ref|XP_008461321.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 785.4 bits (2027), Expect = 4.7e-224
Identity = 388/400 (97.00%), Postives = 393/400 (98.25%), Query Frame = 1 

Query: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60
           MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK
Sbjct: 1   MNGKSMFLRLNRYPNSYPISETHVFDHKKSAFLWVLMRHKSSGGMRPKRKIYYRVAELDK 60

Query: 61  VMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120
           VMDLQKKPSLILKLINIIQSQK+KFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS
Sbjct: 61  VMDLQKKPSLILKLINIIQSQKHKFILLRDLEKEVGFVQKWNFMAVIEKYSSIFYVGSGS 120

Query: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180
           SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG
Sbjct: 121 SRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEFIASELG 180

Query: 181 LPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSSCGYGKR 240
           LPCDFKTSLIPKYPEFFSVKE DGKAHL+LENWDSSLA+CARED F KARDLSSCG GKR
Sbjct: 181 LPCDFKTSLIPKYPEFFSVKEADGKAHLNLENWDSSLAVCAREDGFGKARDLSSCGSGKR 240

Query: 241 VRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300
           VRISKDGNF GPFAFKMCFP GFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK
Sbjct: 241 VRISKDGNFCGPFAFKMCFPPGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVADPKTRK 300

Query: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360
           RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL
Sbjct: 301 RVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGARSTVFL 360

Query: 361 KEGYEGSILVDKCPLLLHSDRFLSLCGRRDMSCNSHQVSL 401
           KEGYEGS LVDKCPLLLHSDRFLSLCGRRD+SCN+HQVSL
Sbjct: 361 KEGYEGSTLVDKCPLLLHSDRFLSLCGRRDVSCNTHQVSL 400

[Close]
BLAST of Csa1G164710 vs. NCBI nr
Match: gi|595862784|ref|XP_007211465.1| (hypothetical protein PRUPE_ppa007448mg [Prunus persica])

HSP 1 Score: 548.1 bits (1411), Expect = 1.3e-152
Identity = 270/364 (74.18%), Postives = 311/364 (85.44%), Query Frame = 1 

Query: 33  LWVLMRHKSSGGMRPKRKIYYRVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLE 92
           +WV ++HKSSGG RPKRK+Y+RV ELDKVMD QKKP+LIL+L +IIQSQK++ +LLRDLE
Sbjct: 1   MWVPVKHKSSGGRRPKRKVYHRVHELDKVMDFQKKPALILQLKSIIQSQKHQSLLLRDLE 60

Query: 93  KEVGFVQKWNFMAVIEKYSSIFYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILV 152
           KEVGFVQKWNFMA IEKY SIFYVG G+ R PP+V L+ KA+ +A EE + K  MEPILV
Sbjct: 61  KEVGFVQKWNFMAAIEKYPSIFYVGGGN-RTPPFVTLAEKAKKVAREEAEAKDLMEPILV 120

Query: 153 KNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLEN 212
           KNLRKLLMLSVDCRVPLENIEFI SELGLP DFK SL+PKYPE FSVKEV+GK HLHLEN
Sbjct: 121 KNLRKLLMLSVDCRVPLENIEFIESELGLPNDFKKSLLPKYPEIFSVKEVNGKLHLHLEN 180

Query: 213 WDSSLAICAREDRFAKARDLSSCGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEH 272
           WDSS+A+ ARE++       +  G G +VRISKDGNF GP AF+M FP+GFRPNTSYLE 
Sbjct: 181 WDSSIAVTAREEQLGGEGISAPSGLGNKVRISKDGNFLGPHAFRMSFPAGFRPNTSYLEQ 240

Query: 273 LERWQKMDFPSPYLNARRFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLL 332
           LERWQKMDFPSPYLNARRFD+ADPK RKRVVAVLHE LSLTM+KRMTS QLDAFH E+ L
Sbjct: 241 LERWQKMDFPSPYLNARRFDIADPKVRKRVVAVLHELLSLTMQKRMTSAQLDAFHSEYFL 300

Query: 333 PSKLLLCLVKHQGIFYITNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDM- 392
           PSKLLLCL+KH GIFYITNKGARSTVFLKE Y+G  L++KCPLLL +D+F++L GRR++ 
Sbjct: 301 PSKLLLCLIKHPGIFYITNKGARSTVFLKEAYDGLNLINKCPLLLFNDKFVALSGRREIN 360

Query: 393 SCNS 396
           SC +
Sbjct: 361 SCKT 363

[Close]
BLAST of Csa1G164710 vs. NCBI nr
Match: gi|694435928|ref|XP_009345097.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Pyrus x bretschneideri])

HSP 1 Score: 543.5 bits (1399), Expect = 3.1e-151
Identity = 273/401 (68.08%), Postives = 327/401 (81.55%), Query Frame = 1 

Query: 1   MNGKSMFLRLNRYPNSYPISETHVFDH------KKSAFLWVLMRHKSSGGMRPKRKIYYR 60
           M+ ++   R ++ P +  + ET  +        ++S  +WV ++HKSSGG RPK+K+Y+R
Sbjct: 1   MHRRTTLPRFHQLPKTSHLCETDAYASPSPIPCRRSGSMWVPVKHKSSGGRRPKKKVYHR 60

Query: 61  VAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSIF 120
           V ELDKVMDLQKKP+LIL+L +IIQSQK++ +LLRDLEKEVGFVQKWNF+AVIEKY +IF
Sbjct: 61  VHELDKVMDLQKKPALILQLKSIIQSQKHQSLLLRDLEKEVGFVQKWNFVAVIEKYPAIF 120

Query: 121 YVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIEF 180
           YVG G+ R PP+V L+ KAE +A EE   K  MEP+LVKNLRKLLMLSVDCRVPLENIEF
Sbjct: 121 YVGGGN-RTPPFVTLAEKAEKVAGEEASAKDLMEPMLVKNLRKLLMLSVDCRVPLENIEF 180

Query: 181 IASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAKARDLSS 240
           I SELGLP DFK SLIPKYPEFFSVK+V+ K  LHLENWDSSLA+ ARE+  A     ++
Sbjct: 181 IESELGLPNDFKKSLIPKYPEFFSVKDVNEKDFLHLENWDSSLAVTAREENLADEGISAA 240

Query: 241 CGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNARRFDVA 300
            G GK+VRISKDGNF GP AF+M FP+GFRPNTSYLE LERWQKM+FPSPYLNARRFD+A
Sbjct: 241 YGLGKKVRISKDGNFLGPHAFRMNFPAGFRPNTSYLEQLERWQKMEFPSPYLNARRFDIA 300

Query: 301 DPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYITNKGA 360
           DPK+RKRVVAVLHE LSLTM+KRMTS QL+AFH E+ LPSKLLLCL+KH GIFYITNKGA
Sbjct: 301 DPKSRKRVVAVLHELLSLTMQKRMTSAQLEAFHSEYFLPSKLLLCLIKHPGIFYITNKGA 360

Query: 361 RSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDMS-CN 395
           RSTVFLKE ++G  L++KCPLL   D+F++L GRR+ + CN
Sbjct: 361 RSTVFLKEAFDGLNLINKCPLLSFYDKFVALSGRRETNPCN 400

[Close]
BLAST of Csa1G164710 vs. NCBI nr
Match: gi|645239311|ref|XP_008226067.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume])

HSP 1 Score: 542.7 bits (1397), Expect = 5.3e-151
Identity = 278/407 (68.30%), Postives = 330/407 (81.08%), Query Frame = 1 

Query: 1   MNGKSMFLRLNRYPNSYPI--SETHVFD-----HKKSAFLWVLMRHKSSGGMRPKRKIYY 60
           M  K+  LR ++   + P   S+ H        H+K++ +WV ++HKSSGG RPKRK+Y+
Sbjct: 1   MQRKTTMLRFHQLLKTSPPCESQAHALSSPIPCHRKAS-MWVPVKHKSSGGRRPKRKVYH 60

Query: 61  RVAELDKVMDLQKKPSLILKLINIIQSQKNKFILLRDLEKEVGFVQKWNFMAVIEKYSSI 120
           RV ELDKVMD QKKP+LIL+L +IIQSQK++ +LLRDLEKEVGFVQKWNFMA IEKY SI
Sbjct: 61  RVHELDKVMDFQKKPALILQLKSIIQSQKHQSLLLRDLEKEVGFVQKWNFMAAIEKYPSI 120

Query: 121 FYVGSGSSRVPPYVRLSNKAEMIASEEDKVKSAMEPILVKNLRKLLMLSVDCRVPLENIE 180
           FYVG G+ R PP+V L+ KA+ +A EE + K  MEPILVKNLRKLLMLSVDCRVPLENIE
Sbjct: 121 FYVGGGN-RTPPFVTLAEKAKKVAREEAEAKDLMEPILVKNLRKLLMLSVDCRVPLENIE 180

Query: 181 FIASELGLPCDFKTSLIPKYPEFFSVKEVDGKAHLHLENWDSSLAICAREDRFAK---AR 240
           FI SELGLP DFK SL+PKYPE FSVKE++GK +LHLENWDSS+A+ ARE++        
Sbjct: 181 FIDSELGLPNDFKKSLLPKYPEIFSVKELNGKLYLHLENWDSSIAVTAREEQLGGELGGE 240

Query: 241 DLSS-CGYGKRVRISKDGNFSGPFAFKMCFPSGFRPNTSYLEHLERWQKMDFPSPYLNAR 300
            +S+  G G +VRISKDGNF GP AF+M FP+GFRPNTSYLE LERWQKMDFPSPYLNAR
Sbjct: 241 GISAPSGLGNKVRISKDGNFLGPHAFRMSFPAGFRPNTSYLEQLERWQKMDFPSPYLNAR 300

Query: 301 RFDVADPKTRKRVVAVLHEFLSLTMEKRMTSTQLDAFHREFLLPSKLLLCLVKHQGIFYI 360
           RFD+ADPK RKRVVAVLHE LSLTM+KRMTS QLDAFH E+ LPSKLLLCL+KH GIFYI
Sbjct: 301 RFDIADPKARKRVVAVLHELLSLTMQKRMTSAQLDAFHSEYFLPSKLLLCLIKHPGIFYI 360

Query: 361 TNKGARSTVFLKEGYEGSILVDKCPLLLHSDRFLSLCGRRDM-SCNS 396
           TNKGARSTVFLKE Y+G  L++KCPLLL +D+F++L GRR++ SC +
Sbjct: 361 TNKGARSTVFLKEAYDGLNLINKCPLLLFNDKFVALSGRREINSCKT 405

The following BLAST results are available for this feature:
BLAST of Csa1G164710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPD1_ARATH6.9e-3432.43Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
BLAST of Csa1G164710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVT2_CUCSA4.7e-231100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G164710 PE=4 SV=1[more]
M5WG21_PRUPE8.8e-15374.18Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007448mg PE=4 SV=1[more]
V4T294_9ROSI7.7e-14971.47Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020719mg PE=4 SV=1[more]
A0A067JMI5_JATCU6.5e-14873.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22647 PE=4 SV=1[more]
A0A061F8V2_THECC5.5e-14770.40Ubiquitin carboxyl-terminal hydrolase family protein isoform 1 OS=Theobroma caca... [more]
BLAST of Csa1G164710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79120.16.9e-14167.30 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G21970.19.2e-4529.72 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G01037.12.8e-4131.25 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G33495.13.9e-3532.43 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT5G48040.11.8e-3228.57 Ubiquitin carboxyl-terminal hydrolase family protein[more]
BLAST of Csa1G164710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443632|ref|XP_004139581.1|6.7e-231100.00PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|659071667|ref|XP_008461321.1|4.7e-22497.00PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|595862784|ref|XP_007211465.1|1.3e-15274.18hypothetical protein PRUPE_ppa007448mg [Prunus persica][more]
gi|694435928|ref|XP_009345097.1|3.1e-15168.08PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Pyrus x bretschneideri][more]
gi|645239311|ref|XP_008226067.1|5.3e-15168.30PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G164710.1Csa1G164710.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 54..389
score: 1.2E
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 36..394
score: 7.5E
NoneNo IPR availablePANTHERPTHR31476:SF11UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 36..394
score: 7.5E