Csa1G154080 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G154080
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 10018444 .. 10018777 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGAGCATGGACTGAGAGCAAAGGGAACTGAAGCGAAGTGTAGCGGATCTAGATGGGAGCAGAGGAATGAAGCAGCGCGGAAATGGGCGAGTAAAATCGGAGTGGAGCAAGGTTGATATACAGAGCGTCATGGAATTCGTTAGATCTGATTTGAGCAAGTCGAGCAGTTAGATTTGTAAAGGGTGAAAGGGATTGAGTGGTCAGCATGGTCTAGTACGGATAAGTGTTGGTAGAGGGTGGTCGAATGGCCACTTGGGGATGATGGAGGAGCGATGGCTAAGTCAAAACTTGGGGCTATCATACTACCTGGGTTTGTATTTTAGTGATTGA

mRNA sequence

ATGTCGGAGCATGGACTGAGAGCAAAGGGAACTGAAGCGAAGTGTAGCGGATCTAGATGGGAGCAGAGGAATGAAGCAGCGCGGAAATGGGCGAGTAAAATCGGAGTGGAGCAAGTACGGATAAGTGTTGGTAGAGGGTGGTCGAATGGCCACTTGGGGATGATGGAGGAGCGATGGCTAAGTCAAAACTTGGGGCTATCATACTACCTGGGTTTGTATTTTAGTGATTGA

Coding sequence (CDS)

ATGTCGGAGCATGGACTGAGAGCAAAGGGAACTGAAGCGAAGTGTAGCGGATCTAGATGGGAGCAGAGGAATGAAGCAGCGCGGAAATGGGCGAGTAAAATCGGAGTGGAGCAAGTACGGATAAGTGTTGGTAGAGGGTGGTCGAATGGCCACTTGGGGATGATGGAGGAGCGATGGCTAAGTCAAAACTTGGGGCTATCATACTACCTGGGTTTGTATTTTAGTGATTGA

Protein sequence

MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWLSQNLGLSYYLGLYFSD*
Homology
[Close]
BLAST of Csa1G154080 vs. TrEMBL
Match: A0A0A0LVD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G154080 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.6e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL 60
          MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL
Sbjct: 1  MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL 60

Query: 61 SQNLGLSYYLGLYFSD 77
          SQNLGLSYYLGLYFSD
Sbjct: 61 SQNLGLSYYLGLYFSD 76

[Close]
BLAST of Csa1G154080 vs. NCBI nr
Match: gi|700209818|gb|KGN64914.1| (hypothetical protein Csa_1G154080 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 3.7e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL 60
          MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL
Sbjct: 1  MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL 60

Query: 61 SQNLGLSYYLGLYFSD 77
          SQNLGLSYYLGLYFSD
Sbjct: 61 SQNLGLSYYLGLYFSD 76

The following BLAST results are available for this feature:
BLAST of Csa1G154080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVD0_CUCSA2.6e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G154080 PE=4 SV=1[more]
BLAST of Csa1G154080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209818|gb|KGN64914.1|3.7e-37100.00hypothetical protein Csa_1G154080 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G154080.1Csa1G154080.1mRNA