Csa1G075040 (gene) Cucumber (Chinese Long) v2

NameCsa1G075040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 7730304 .. 7730587 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGTGTAGAAGCTGATGATTAGGTTTATGGAGGGGCCAGAGATGGCCCACAGGGGCTGTGATTGCCTGGAATTTGACGTGCAGAGCCGTAGTATTGAGTAATATATAAGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGAGCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA

mRNA sequence

ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGAGCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA

Coding sequence (CDS)

ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGAGCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA

Protein sequence

MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI*
BLAST of Csa1G075040 vs. TrEMBL
Match: A0A0A0LUM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075040 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.0e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI 59
          MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI
Sbjct: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI 58

BLAST of Csa1G075040 vs. NCBI nr
Match: gi|700209603|gb|KGN64699.1| (hypothetical protein Csa_1G075040 [Cucumis sativus])

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-25
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1

Query: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI 59
          MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI
Sbjct: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI 58

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LUM6_CUCSA1.0e-25100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209603|gb|KGN64699.1|1.5e-25100.00hypothetical protein Csa_1G075040 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G075040.1Csa1G075040.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G075040CSPI01G12310Wild cucumber (PI 183967)cpicuB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G075040Cucumber (Gy14) v1cgycuB015
Csa1G075040Cucumber (Gy14) v1cgycuB161
Csa1G075040Cucumber (Gy14) v1cgycuB170
Csa1G075040Cucurbita maxima (Rimu)cmacuB010
Csa1G075040Cucurbita maxima (Rimu)cmacuB218
Csa1G075040Cucurbita maxima (Rimu)cmacuB391
Csa1G075040Cucurbita maxima (Rimu)cmacuB648
Csa1G075040Cucurbita maxima (Rimu)cmacuB848
Csa1G075040Cucurbita moschata (Rifu)cmocuB000
Csa1G075040Cucurbita moschata (Rifu)cmocuB203
Csa1G075040Cucurbita moschata (Rifu)cmocuB380
Csa1G075040Cucurbita moschata (Rifu)cmocuB419
Csa1G075040Cucurbita moschata (Rifu)cmocuB636
Csa1G075040Cucurbita moschata (Rifu)cmocuB836
Csa1G075040Melon (DHL92) v3.5.1cumeB027
Csa1G075040Melon (DHL92) v3.5.1cumeB083
Csa1G075040Watermelon (Charleston Gray)cuwcgB009
Csa1G075040Watermelon (Charleston Gray)cuwcgB012
Csa1G075040Watermelon (Charleston Gray)cuwcgB048
Csa1G075040Watermelon (97103) v1cuwmB023
Csa1G075040Watermelon (97103) v1cuwmB043
Csa1G075040Watermelon (97103) v1cuwmB075
Csa1G075040Cucurbita pepo (Zucchini)cpecuB029
Csa1G075040Cucurbita pepo (Zucchini)cpecuB058
Csa1G075040Cucurbita pepo (Zucchini)cpecuB474
Csa1G075040Cucurbita pepo (Zucchini)cpecuB506
Csa1G075040Cucurbita pepo (Zucchini)cpecuB770
Csa1G075040Bottle gourd (USVL1VR-Ls)culsiB019
Csa1G075040Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G075040Cucumber (Gy14) v2cgybcuB001
Csa1G075040Cucumber (Gy14) v2cgybcuB158
Csa1G075040Cucumber (Gy14) v2cgybcuB239
Csa1G075040Melon (DHL92) v3.6.1cumedB022
Csa1G075040Melon (DHL92) v3.6.1cumedB077
Csa1G075040Silver-seed gourdcarcuB0163
Csa1G075040Silver-seed gourdcarcuB0186
Csa1G075040Silver-seed gourdcarcuB0575
Csa1G075040Silver-seed gourdcarcuB0661
Csa1G075040Silver-seed gourdcarcuB0963
Csa1G075040Watermelon (97103) v2cuwmbB000
Csa1G075040Watermelon (97103) v2cuwmbB023
Csa1G075040Watermelon (97103) v2cuwmbB044
Csa1G075040Wax gourdcuwgoB052
Csa1G075040Wax gourdcuwgoB023
Csa1G075040Wax gourdcuwgoB073
Csa1G075040Cucumber (Chinese Long) v2cucuB026
Csa1G075040Cucumber (Chinese Long) v2cucuB035