CSPI01G12310 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G12310
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 7778756 .. 7779039 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGTGTAGAAGCTGATGATTAGGTTTATGGAGGGGCCAGAGATGGCCCACAGGGGCTGTGATTGCCTGGAATTTGACGTGCAGAGCCGTAGTATTGAGTAATATATAAGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGATCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA

mRNA sequence

ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGATCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA

Coding sequence (CDS)

ATGAGTGGGAAACCAAAAGGGGCAGCCATTGGAAAAGGAAAAGGCTCCTGCCATGAGTTGGTTTTGGACAAAGATGATGCAAAAGGGGCCGCCGCATTGATCCGTCTTGGTTGCTTGGCTGTTCGGCAAACCCCCGCCGTACACGACGAGTGGGACTGTGGCCGGCTTCTCATTTAA
Homology
[Close]
BLAST of CSPI01G12310 vs. TrEMBL
Match: A0A0A0LUM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075040 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.7e-25
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 1 

Query: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALIRLGCLAVRQTPAVHDEWDCGRLLI 59
          MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAAL RLGCLAVRQTPAVHDEWDCGRLLI
Sbjct: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI 58

[Close]
BLAST of CSPI01G12310 vs. NCBI nr
Match: gi|700209603|gb|KGN64699.1| (hypothetical protein Csa_1G075040 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-25
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 1 

Query: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALIRLGCLAVRQTPAVHDEWDCGRLLI 59
          MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAAL RLGCLAVRQTPAVHDEWDCGRLLI
Sbjct: 1  MSGKPKGAAIGKGKGSCHELVLDKDDAKGAAALSRLGCLAVRQTPAVHDEWDCGRLLI 58

The following BLAST results are available for this feature:
BLAST of CSPI01G12310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G12310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUM6_CUCSA1.7e-2598.28Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075040 PE=4 SV=1[more]
BLAST of CSPI01G12310 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G12310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209603|gb|KGN64699.1|2.5e-2598.28hypothetical protein Csa_1G075040 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G12310.1CSPI01G12310.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G12310Csa1G075040Cucumber (Chinese Long) v2cpicuB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G12310Cucumber (Gy14) v1cgycpiB016
CSPI01G12310Cucumber (Gy14) v1cgycpiB162
CSPI01G12310Cucumber (Gy14) v1cgycpiB172
CSPI01G12310Cucurbita maxima (Rimu)cmacpiB009
CSPI01G12310Cucurbita maxima (Rimu)cmacpiB219
CSPI01G12310Cucurbita maxima (Rimu)cmacpiB395
CSPI01G12310Cucurbita maxima (Rimu)cmacpiB654
CSPI01G12310Cucurbita maxima (Rimu)cmacpiB865
CSPI01G12310Cucurbita moschata (Rifu)cmocpiB000
CSPI01G12310Cucurbita moschata (Rifu)cmocpiB205
CSPI01G12310Cucurbita moschata (Rifu)cmocpiB383
CSPI01G12310Cucurbita moschata (Rifu)cmocpiB423
CSPI01G12310Cucurbita moschata (Rifu)cmocpiB647
CSPI01G12310Cucurbita moschata (Rifu)cmocpiB846
CSPI01G12310Cucumber (Chinese Long) v2cpicuB034
CSPI01G12310Cucumber (Chinese Long) v2cpicuB044
CSPI01G12310Cucumber (Chinese Long) v2cpicuB051
CSPI01G12310Melon (DHL92) v3.5.1cpimeB024
CSPI01G12310Melon (DHL92) v3.5.1cpimeB086
CSPI01G12310Watermelon (Charleston Gray)cpiwcgB011
CSPI01G12310Watermelon (Charleston Gray)cpiwcgB016
CSPI01G12310Watermelon (Charleston Gray)cpiwcgB051
CSPI01G12310Watermelon (97103) v1cpiwmB026
CSPI01G12310Watermelon (97103) v1cpiwmB043
CSPI01G12310Watermelon (97103) v1cpiwmB082
CSPI01G12310Cucurbita pepo (Zucchini)cpecpiB052
CSPI01G12310Cucurbita pepo (Zucchini)cpecpiB475
CSPI01G12310Cucurbita pepo (Zucchini)cpecpiB506
CSPI01G12310Cucurbita pepo (Zucchini)cpecpiB771
CSPI01G12310Bottle gourd (USVL1VR-Ls)cpilsiB018
CSPI01G12310Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G12310Melon (DHL92) v3.6.1cpimedB023
CSPI01G12310Melon (DHL92) v3.6.1cpimedB076
CSPI01G12310Cucumber (Gy14) v2cgybcpiB001
CSPI01G12310Cucumber (Gy14) v2cgybcpiB161
CSPI01G12310Cucumber (Gy14) v2cgybcpiB248
CSPI01G12310Silver-seed gourdcarcpiB0169
CSPI01G12310Silver-seed gourdcarcpiB0193
CSPI01G12310Silver-seed gourdcarcpiB0581
CSPI01G12310Silver-seed gourdcarcpiB0670
CSPI01G12310Silver-seed gourdcarcpiB0986
CSPI01G12310Cucumber (Chinese Long) v3cpicucB001
CSPI01G12310Cucumber (Chinese Long) v3cpicucB039
CSPI01G12310Cucumber (Chinese Long) v3cpicucB051
CSPI01G12310Watermelon (97103) v2cpiwmbB001
CSPI01G12310Watermelon (97103) v2cpiwmbB023
CSPI01G12310Watermelon (97103) v2cpiwmbB046
CSPI01G12310Wax gourdcpiwgoB023
CSPI01G12310Wax gourdcpiwgoB052
CSPI01G12310Wax gourdcpiwgoB075
CSPI01G12310Wild cucumber (PI 183967)cpicpiB026
CSPI01G12310Wild cucumber (PI 183967)cpicpiB038
CSPI01G12310Cucurbita pepo (Zucchini)cpecpiB025