Csa1G074400 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAGAGAAGAAGAGAAGAAGATCTTTGTGAAGGGGTTTTCTGAAAAGCTCTCAATAATGTCCAACCCTATCCGTTGTCAACCAACTCCACAAAGCAATCGAAAATTCGTCGAAAGAAATCGAAGAAAAGAAATGAAAGCCCTTTTCTCCACACTCAATTCTCTTCTTCCCAATCAAACCTCAATGGTTTAATTTCTTTCTCTCTGTGTTTTTCTTTTCCATATATATATATATTTTTTTTTGTTTCCAATAACCCCAAGAAAAAAGATCATGATTGCTAAATGTTTGTGTTCAGGAAGCTCCAAGAACAGTGCCGGATCAACTTGAAGATGCGACAAATTACATAAAAGAATTACAAAAGAACATAAAGAAATTGAAAGAGAAGAAAGAGAAGCTAATGGGAATGGAAGAAGATGAAGAAGCAGAAGGAAGAAGAAGAAGAAGAGGATATGAAGATGAAACAAAACCAAAATTATCGGTTCATGTTAAAGCTCATCAAATCGGTTCTTCAGTGGAAGTGTTTTTGACCACTGGATCAGACTATCACTTTAATCTTCAACAAGTGCTTCGACTTCTTCAAGATAATGGAGCTGAGATCCTCAATGTCAATCAGTCCATGTTCACTGATCGGGTTTTTCATAAGATAACGGCTCAGGTAATTTATTATTATCTCATTATGTCTCGTAAATAATTCAGGTCTTCTTTTTGTTTTTGGAGTTTTAAATTTACTTGTAGCTCTCAACTTCCATTATTGTTGGCATTTTTTTTGGATTTTTTCAAAATTCGGAAGAATTGAATTAGGTATGAAAATTTCAAAAATAAAAAGAAACTGCAATTTTAGTATTCAAAACTTGGTTTGGTTTTTGAAAACTAGGGTTTTCTTAAGCTAAGAGATAAAATGAAACGAACAAAATGGATAATGATGTTAACATGAACTAAAATTGATAAGTTTTTTAGGGTCATAAACATTATCTTTGATTTTGAGTTCATCATCCTTCCTTTTATTTAAATTGATAGGTGACTTTTGGTTAGTGGATTATGAGTCAATCACTTCCAAAATAGTTATCTAATTGAGTTTATGTATAAAATACTCCGTCGGTTAACTATTTTTTATTTTTTAAAATCTTAAATATTAGTACAACAGATGAGAGTCTTTTATTAGTTTGTTAATAAAACAAACAATATGTTTTGAATTTTCTTTATTTAAAAAATAAAAAAAAAAGAAATTAATTATCAAACACATTTAAAAAAAAATAATTTTCGAAAACAGAAAATAGAAAAATACATAGACTAACAAACAAAGCCTTTAGTTAAATCATTATTTCTCAAGTCGAAAATATAATTACTAATTGAGTAATAACTATCTCTTGAAACCAAACATAATGATGAAAAATCAACACTAGCTCTAAACAATTGAAAATCATTTTTTAAGAGTTTTAATACCAAACATAAATTTAATTGTTTTAGAATTTTTAGAGAAATTATAATTTAAATTGATGAACCAACTATTAATTATTAATTTAGGGTGTGAAGCGTTTATTTTCTCAAAATATGGTTAAAAAATAGATAATAAAGAAAAGAAACAACCTCTAGTTCTTTAAATTAAAGTAAAAAAAAATCAAATAGCCCTCAAATTTGAAATATTGAATTAAAAATATTTGCTTCATTGCTAGAATTTATAAGTTAGAATTAAGAAGAAAAAAAATGTAGTTGAAAGTTAGAATTAAAAAAGCCAAAAATAATAATAAGAACAACAACAATAATGTAGTTTTAACAGAAGACAAAAAAAATAGTTGCAAACAAGTTGATGTTAAAATGTGGAAGAAGAAGAAAGAGAAGATGATGACGACGATGATGATGATATATGTATTGAAAAATTGTAGGTGGATGGAGAAGGAATATTAGGGGGAGGAGATGGTGAAAGGATTTGTGAGACAGTGAAGAAATATGTTTCAGAGTACAAAGATGGGGAATGCAGTGTTGAAGGAAATGGTGGTGAAGATTTCTGAATCCATTTATTCTACTCTCTCTCTTTCTTTTATGGATAATGCTTCAAATAAACCCATCTTCCCATTATTCACTGCTTGTTATATTATAATCTCTTTTTTTTT ATGTCCAACCCTATCCGTTGTCAACCAACTCCACAAAGCAATCGAAAATTCGTCGAAAGAAATCGAAGAAAAGAAATGAAAGCCCTTTTCTCCACACTCAATTCTCTTCTTCCCAATCAAACCTCAATGGAAGCTCCAAGAACAGTGCCGGATCAACTTGAAGATGCGACAAATTACATAAAAGAATTACAAAAGAACATAAAGAAATTGAAAGAGAAGAAAGAGAAGCTAATGGGAATGGAAGAAGATGAAGAAGCAGAAGGAAGAAGAAGAAGAAGAGGATATGAAGATGAAACAAAACCAAAATTATCGGTTCATGTTAAAGCTCATCAAATCGGTTCTTCAGTGGAAGTGTTTTTGACCACTGGATCAGACTATCACTTTAATCTTCAACAAGTGCTTCGACTTCTTCAAGATAATGGAGCTGAGATCCTCAATGTCAATCAGTCCATGTTCACTGATCGGGTTTTTCATAAGATAACGGCTCAGGTGGATGGAGAAGGAATATTAGGGGGAGGAGATGGTGAAAGGATTTGTGAGACAGTGAAGAAATATGTTTCAGAGTACAAAGATGGGGAATGCAGTGTTGAAGGAAATGGTGGTGAAGATTTCTGA ATGTCCAACCCTATCCGTTGTCAACCAACTCCACAAAGCAATCGAAAATTCGTCGAAAGAAATCGAAGAAAAGAAATGAAAGCCCTTTTCTCCACACTCAATTCTCTTCTTCCCAATCAAACCTCAATGGAAGCTCCAAGAACAGTGCCGGATCAACTTGAAGATGCGACAAATTACATAAAAGAATTACAAAAGAACATAAAGAAATTGAAAGAGAAGAAAGAGAAGCTAATGGGAATGGAAGAAGATGAAGAAGCAGAAGGAAGAAGAAGAAGAAGAGGATATGAAGATGAAACAAAACCAAAATTATCGGTTCATGTTAAAGCTCATCAAATCGGTTCTTCAGTGGAAGTGTTTTTGACCACTGGATCAGACTATCACTTTAATCTTCAACAAGTGCTTCGACTTCTTCAAGATAATGGAGCTGAGATCCTCAATGTCAATCAGTCCATGTTCACTGATCGGGTTTTTCATAAGATAACGGCTCAGGTGGATGGAGAAGGAATATTAGGGGGAGGAGATGGTGAAAGGATTTGTGAGACAGTGAAGAAATATGTTTCAGAGTACAAAGATGGGGAATGCAGTGTTGAAGGAAATGGTGGTGAAGATTTCTGA MSNPIRCQPTPQSNRKFVERNRRKEMKALFSTLNSLLPNQTSMEAPRTVPDQLEDATNYIKELQKNIKKLKEKKEKLMGMEEDEEAEGRRRRRGYEDETKPKLSVHVKAHQIGSSVEVFLTTGSDYHFNLQQVLRLLQDNGAEILNVNQSMFTDRVFHKITAQVDGEGILGGGDGERICETVKKYVSEYKDGECSVEGNGGEDF*
BLAST of Csa1G074400 vs. Swiss-Prot
Match: BH118_ARATH (Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.2e-11 Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
BLAST of Csa1G074400 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.7e-10 Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 1
BLAST of Csa1G074400 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.6e-10 Identity = 45/164 (27.44%), Postives = 75/164 (45.73%), Query Frame = 1
BLAST of Csa1G074400 vs. Swiss-Prot
Match: ORG2_ARATH (Transcription factor ORG2 OS=Arabidopsis thaliana GN=ORG2 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 8.7e-09 Identity = 45/158 (28.48%), Postives = 87/158 (55.06%), Query Frame = 1
BLAST of Csa1G074400 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.7e-08 Identity = 48/164 (29.27%), Postives = 82/164 (50.00%), Query Frame = 1
BLAST of Csa1G074400 vs. TrEMBL
Match: A0A0A0LUL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G074400 PE=4 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 3.8e-112 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of Csa1G074400 vs. TrEMBL
Match: A5C0F4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010916 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 7.4e-31 Identity = 83/185 (44.86%), Postives = 120/185 (64.86%), Query Frame = 1
BLAST of Csa1G074400 vs. TrEMBL
Match: A0A067G8S2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029713mg PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.8e-29 Identity = 72/175 (41.14%), Postives = 114/175 (65.14%), Query Frame = 1
BLAST of Csa1G074400 vs. TrEMBL
Match: V4W8P1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016846mg PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 3.1e-29 Identity = 73/175 (41.71%), Postives = 115/175 (65.71%), Query Frame = 1
BLAST of Csa1G074400 vs. TrEMBL
Match: A0A067GKY0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029713mg PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 5.3e-29 Identity = 72/175 (41.14%), Postives = 115/175 (65.71%), Query Frame = 1
BLAST of Csa1G074400 vs. TAIR10
Match: AT4G20970.1 (AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 101.7 bits (252), Expect = 5.6e-22 Identity = 63/177 (35.59%), Postives = 101/177 (57.06%), Query Frame = 1
BLAST of Csa1G074400 vs. TAIR10
Match: AT4G25400.1 (AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 2.4e-12 Identity = 49/159 (30.82%), Postives = 82/159 (51.57%), Query Frame = 1
BLAST of Csa1G074400 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-11 Identity = 50/155 (32.26%), Postives = 79/155 (50.97%), Query Frame = 1
BLAST of Csa1G074400 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 66.2 bits (160), Expect = 2.6e-11 Identity = 45/164 (27.44%), Postives = 75/164 (45.73%), Query Frame = 1
BLAST of Csa1G074400 vs. TAIR10
Match: AT3G56970.1 (AT3G56970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 4.9e-10 Identity = 45/158 (28.48%), Postives = 86/158 (54.43%), Query Frame = 1
BLAST of Csa1G074400 vs. NCBI nr
Match: gi|449457739|ref|XP_004146605.1| (PREDICTED: transcription factor bHLH118-like [Cucumis sativus]) HSP 1 Score: 412.1 bits (1058), Expect = 5.5e-112 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of Csa1G074400 vs. NCBI nr
Match: gi|659068080|ref|XP_008442634.1| (PREDICTED: transcription factor ORG2-like [Cucumis melo]) HSP 1 Score: 346.7 bits (888), Expect = 2.8e-92 Identity = 182/214 (85.05%), Postives = 193/214 (90.19%), Query Frame = 1
BLAST of Csa1G074400 vs. NCBI nr
Match: gi|694323703|ref|XP_009352909.1| (PREDICTED: transcription factor bHLH55-like isoform X2 [Pyrus x bretschneideri]) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 78/187 (41.71%), Postives = 124/187 (66.31%), Query Frame = 1
BLAST of Csa1G074400 vs. NCBI nr
Match: gi|657983315|ref|XP_008383729.1| (PREDICTED: transcription factor bHLH36-like isoform X2 [Malus domestica]) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 78/187 (41.71%), Postives = 123/187 (65.78%), Query Frame = 1
BLAST of Csa1G074400 vs. NCBI nr
Match: gi|147822237|emb|CAN61967.1| (hypothetical protein VITISV_010916 [Vitis vinifera]) HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30 Identity = 83/185 (44.86%), Postives = 120/185 (64.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |