Csa1G064770 (gene) Cucumber (Chinese Long) v2

NameCsa1G064770
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 6844829 .. 6845425 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCCAAGAGAGGCGGCTCCAATTCTGATATCTACATATGGTTTCTTCAGGTTCTAACAATTCTAGTATTGGCTTTCTTGGCCATATGGGCCACTCTAACCCCTAGAACTCCTACTTTCACCATCACCAATATGGATTTGAAGCCATATATTCGAAACGACACCGCTCTCGCAACCACAAACTCTTCTTTCTTAGCCTTTAATGTGACCATCTCAAATCCCAACAAAATGATTGGTGTTTTCTTGGATGAGATTAATGTAACAATAGGCTGCAACAACGAGAGCCTAATTGGGTCGAGGTCGTGGTCGAAGTCAATGGCAGGATTTTATTTGGGGCACAGCGTAAGTGATTTGAAGGAGGTTGACTTGAGTGTTGATGATAATGAATTGTCATTGTGTAGGAAAGTGGATTATTATTTGAGGGTTGGGGTGGATACGGGTGTTAGATATAAGATTATGTGGTTCATAACCAGGCATCATGGGTTAGTTTTTGAAGATTATATTGAAATTGGCTACGGTCATGGGCAAATGCTAGGAACAACACAAATGAAGTTAAAGCTAAGTTTTACCAATTTGTAGTTAACCCTTGGCTTT

mRNA sequence

ATGACTTCCAAGAGAGGCGGCTCCAATTCTGATATCTACATATGGTTTCTTCAGGTTCTAACAATTCTAGTATTGGCTTTCTTGGCCATATGGGCCACTCTAACCCCTAGAACTCCTACTTTCACCATCACCAATATGGATTTGAAGCCATATATTCGAAACGACACCGCTCTCGCAACCACAAACTCTTCTTTCTTAGCCTTTAATGTGACCATCTCAAATCCCAACAAAATGATTGGTGTTTTCTTGGATGAGATTAATGTAACAATAGGCTGCAACAACGAGAGCCTAATTGGGTCGAGGTCGTGGTCGAAGTCAATGGCAGGATTTTATTTGGGGCACAGCGTAAGTGATTTGAAGGAGGTTGACTTGAGTGTTGATGATAATGAATTGTCATTGTGTAGGAAAGTGGATTATTATTTGAGGGTTGGGGTGGATACGGGTGTTAGATATAAGATTATGTGGTTCATAACCAGGCATCATGGGTTAGTTTTTGAAGATTATATTGAAATTGGCTACGGTCATGGGCAAATGCTAGGAACAACACAAATGAAGTTAAAGCTAAGTTTTACCAATTTGTAG

Coding sequence (CDS)

ATGACTTCCAAGAGAGGCGGCTCCAATTCTGATATCTACATATGGTTTCTTCAGGTTCTAACAATTCTAGTATTGGCTTTCTTGGCCATATGGGCCACTCTAACCCCTAGAACTCCTACTTTCACCATCACCAATATGGATTTGAAGCCATATATTCGAAACGACACCGCTCTCGCAACCACAAACTCTTCTTTCTTAGCCTTTAATGTGACCATCTCAAATCCCAACAAAATGATTGGTGTTTTCTTGGATGAGATTAATGTAACAATAGGCTGCAACAACGAGAGCCTAATTGGGTCGAGGTCGTGGTCGAAGTCAATGGCAGGATTTTATTTGGGGCACAGCGTAAGTGATTTGAAGGAGGTTGACTTGAGTGTTGATGATAATGAATTGTCATTGTGTAGGAAAGTGGATTATTATTTGAGGGTTGGGGTGGATACGGGTGTTAGATATAAGATTATGTGGTTCATAACCAGGCATCATGGGTTAGTTTTTGAAGATTATATTGAAATTGGCTACGGTCATGGGCAAATGCTAGGAACAACACAAATGAAGTTAAAGCTAAGTTTTACCAATTTGTAG

Protein sequence

MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQMKLKLSFTNL*
BLAST of Csa1G064770 vs. TrEMBL
Match: A0A0A0LRN3_CUCSA (Harpin inducing protein 1-like 9 OS=Cucumis sativus GN=Csa_1G064770 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.0e-106
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1

Query: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60
           MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT
Sbjct: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60

Query: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK 120
           TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK
Sbjct: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK 120

Query: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180
           EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG
Sbjct: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180

Query: 181 TTQMKLKLSFTNL 194
           TTQMKLKLSFTNL
Sbjct: 181 TTQMKLKLSFTNL 193

BLAST of Csa1G064770 vs. TrEMBL
Match: V4W823_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017718mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-14
Identity = 58/187 (31.02%), Postives = 100/187 (53.48%), Query Frame = 1

Query: 8   SNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLA 67
           S   + +W  QV+ + VL  + IW  L P +P + ITN  +    ++++  +  N+S + 
Sbjct: 13  SKISVLLWLCQVVIVWVLISVLIWLCLKPISPVYMITNAYVPALNQHNSTESIRNNSVVN 72

Query: 68  FNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVD 127
            N  +SNPN+ IG++ ++I +T+    +++IG    + S+AGFY G+  +    V ++  
Sbjct: 73  LNFELSNPNERIGIYYNDIIITL-YYKDTVIG----TNSLAGFYQGYKKATSYGVLVNAT 132

Query: 128 DNELSLCRKV-------DYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 187
           D+   L R V          +RV + T VRYKI    T+HH + FE  I IG   G++ G
Sbjct: 133 DDHQPLRRGVLTGNTTTVEMIRVCLKTAVRYKIFLSTTKHHRMNFEACICIG-SDGRISG 192

BLAST of Csa1G064770 vs. TrEMBL
Match: A0A067GJF7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028713mg PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.0e-14
Identity = 58/187 (31.02%), Postives = 99/187 (52.94%), Query Frame = 1

Query: 8   SNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLA 67
           S   + +W  QV+ + VL  + IW  L P +P + ITN  +    ++++     N+S + 
Sbjct: 13  SKISVLLWLCQVVIVWVLISVLIWLCLKPISPVYMITNAYVPALNQHNSTEPIRNNSVVN 72

Query: 68  FNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVD 127
            N  +SNPN+ IG++ ++I +T+    +++IG    + S+AGFY G+  +    V ++  
Sbjct: 73  LNFELSNPNERIGIYYNDIIITL-YYKDTVIG----TNSLAGFYQGYKKATSYGVLVNAT 132

Query: 128 DNELSLCRKV-------DYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 187
           D+   L R V          +RV + T VRYKI    T+HH + FE  I IG   G++ G
Sbjct: 133 DDHQLLRRGVLTGNTTTVEMIRVCLKTAVRYKIFLSTTKHHRMNFEACICIG-SDGRISG 192

BLAST of Csa1G064770 vs. TrEMBL
Match: M0ZPR6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002090 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.3e-12
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 1

Query: 11  DIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLAFNV 70
           D+Y WF QV+ +L L  + +W  L P+ P FTI +     +   +++L + N+S L  NV
Sbjct: 12  DLYCWFFQVVAVLCLTSVVMWLCLVPKNPIFTIVDFSFLVFNIKNSSLHSGNNSVL-LNV 71

Query: 71  TISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVDD-- 130
            I NPNK I ++ ++IN T+  N     G      S  G Y GH     KEV + + D  
Sbjct: 72  EIFNPNKGISIYYNDINFTLNYN-----GLVVGKYSTKGIYQGHKNITRKEVQMYIVDEL 131

Query: 131 --NELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYI 170
              E+   R +++ L   ++T V++KI  + T+  GL +  Y+
Sbjct: 132 FWQEIG-SRSINFVL--VLETIVKFKIFEWRTKQRGLKYVAYM 165

BLAST of Csa1G064770 vs. TrEMBL
Match: A0A0D2R9I1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G176400 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.5e-12
Identity = 51/162 (31.48%), Postives = 80/162 (49.38%), Query Frame = 1

Query: 11  DIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLAFNV 70
           + Y W LQ+L +L +  L +W  L P +P FTITN  + P + +     T++   + + +
Sbjct: 6   NFYFWILQILGLLGILVLCLWLALRPGSPHFTITNFSV-PAVNDSN---TSDHGIIQYQL 65

Query: 71  TISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVDDNE 130
            I NPNK  G++ D+I + I  +  +++G+ +      G    H V +  +VD       
Sbjct: 66  DIKNPNKDSGIYYDDI-LLIFYHGVNIVGNNTIPSFTEGKNRSHQVLNHFDVDNPFWAAL 125

Query: 131 LSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIG 173
            S        LRV + T VRYK     +RHHGL  E +I IG
Sbjct: 126 RSAILNATAELRVDLSTKVRYKTWLIKSRHHGLHREGHIPIG 162

BLAST of Csa1G064770 vs. NCBI nr
Match: gi|778664869|ref|XP_011648423.1| (PREDICTED: uncharacterized protein LOC105434456 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 4.3e-106
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1

Query: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60
           MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT
Sbjct: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60

Query: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK 120
           TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK
Sbjct: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK 120

Query: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180
           EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG
Sbjct: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180

Query: 181 TTQMKLKLSFTNL 194
           TTQMKLKLSFTNL
Sbjct: 181 TTQMKLKLSFTNL 193

BLAST of Csa1G064770 vs. NCBI nr
Match: gi|659067829|ref|XP_008441503.1| (PREDICTED: uncharacterized protein LOC103485604 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 1.5e-90
Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 1

Query: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60
           MTSKRG S+ DIYIWFLQVLTILVLA LAIWATLTP+TPTFTITNMDLKPYIRNDT L T
Sbjct: 1   MTSKRG-SHCDIYIWFLQVLTILVLASLAIWATLTPKTPTFTITNMDLKPYIRNDTVLGT 60

Query: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK 120
            NSSFLAFNVTISNPNKM GVFLDEINVTIGCNNES+ GSRSWSKS+AGFYLGHSVSDLK
Sbjct: 61  -NSSFLAFNVTISNPNKMTGVFLDEINVTIGCNNESVTGSRSWSKSVAGFYLGHSVSDLK 120

Query: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180
           EVDLSV+DNEL LCRKVDYYL+V ++TGVRYK+MWF TRH  LVFEDY+EIGYGHGQMLG
Sbjct: 121 EVDLSVEDNELLLCRKVDYYLKVELETGVRYKVMWFKTRHRRLVFEDYVEIGYGHGQMLG 180

Query: 181 TTQMKLKLSFTNL 194
           TTQMKLKLSFTNL
Sbjct: 181 TTQMKLKLSFTNL 191

BLAST of Csa1G064770 vs. NCBI nr
Match: gi|720077148|ref|XP_010240944.1| (PREDICTED: protein NDR1-like [Nelumbo nucifera])

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-14
Identity = 56/182 (30.77%), Postives = 101/182 (55.49%), Query Frame = 1

Query: 15  WFLQVLTILVLAFLAIWATLTPRTPTFTITN-----MDLKPYIRNDTALATTNSSFLAFN 74
           W LQV+ +L LA + +W +L P+ PT+TI +     +D+K    ++ +  + N+S L F+
Sbjct: 17  WILQVIIVLSLASVVVWLSLRPKCPTYTIVDAYIPALDVKSATSHENSETSRNNS-LFFS 76

Query: 75  VTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVD-- 134
           + I NPNK IG++ DEIN+++    +++IG      S+  FY GH  +  +EV L+ D  
Sbjct: 77  LEIRNPNKGIGIYYDEINLSV-YYGDAVIG----LSSVFSFYQGHRKTARREVRLNADLQ 136

Query: 135 ---DNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQM 187
              D   ++  +    LRVG+   +R+KI    T+H  +  +  +++G   G+++G  + 
Sbjct: 137 FLRDVSRAVSSQGSVDLRVGLAAAIRFKIFSSKTKHQNMELQANLQVG-SDGKLVGENKK 191

BLAST of Csa1G064770 vs. NCBI nr
Match: gi|567913591|ref|XP_006449109.1| (hypothetical protein CICLE_v10017718mg [Citrus clementina])

HSP 1 Score: 87.0 bits (214), Expect = 3.8e-14
Identity = 58/187 (31.02%), Postives = 100/187 (53.48%), Query Frame = 1

Query: 8   SNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLA 67
           S   + +W  QV+ + VL  + IW  L P +P + ITN  +    ++++  +  N+S + 
Sbjct: 13  SKISVLLWLCQVVIVWVLISVLIWLCLKPISPVYMITNAYVPALNQHNSTESIRNNSVVN 72

Query: 68  FNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVD 127
            N  +SNPN+ IG++ ++I +T+    +++IG    + S+AGFY G+  +    V ++  
Sbjct: 73  LNFELSNPNERIGIYYNDIIITL-YYKDTVIG----TNSLAGFYQGYKKATSYGVLVNAT 132

Query: 128 DNELSLCRKV-------DYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 187
           D+   L R V          +RV + T VRYKI    T+HH + FE  I IG   G++ G
Sbjct: 133 DDHQPLRRGVLTGNTTTVEMIRVCLKTAVRYKIFLSTTKHHRMNFEACICIG-SDGRISG 192

BLAST of Csa1G064770 vs. NCBI nr
Match: gi|641856801|gb|KDO75567.1| (hypothetical protein CISIN_1g028713mg [Citrus sinensis])

HSP 1 Score: 85.9 bits (211), Expect = 8.5e-14
Identity = 58/187 (31.02%), Postives = 99/187 (52.94%), Query Frame = 1

Query: 8   SNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLA 67
           S   + +W  QV+ + VL  + IW  L P +P + ITN  +    ++++     N+S + 
Sbjct: 13  SKISVLLWLCQVVIVWVLISVLIWLCLKPISPVYMITNAYVPALNQHNSTEPIRNNSVVN 72

Query: 68  FNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLKEVDLSVD 127
            N  +SNPN+ IG++ ++I +T+    +++IG    + S+AGFY G+  +    V ++  
Sbjct: 73  LNFELSNPNERIGIYYNDIIITL-YYKDTVIG----TNSLAGFYQGYKKATSYGVLVNAT 132

Query: 128 DNELSLCRKV-------DYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 187
           D+   L R V          +RV + T VRYKI    T+HH + FE  I IG   G++ G
Sbjct: 133 DDHQLLRRGVLTGNTTTVEMIRVCLKTAVRYKIFLSTTKHHRMNFEACICIG-SDGRISG 192

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LRN3_CUCSA3.0e-106100.00Harpin inducing protein 1-like 9 OS=Cucumis sativus GN=Csa_1G064770 PE=4 SV=1[more]
V4W823_9ROSI2.7e-1431.02Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017718mg PE=4 SV=1[more]
A0A067GJF7_CITSI6.0e-1431.02Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028713mg PE=4 SV=1[more]
M0ZPR6_SOLTU7.3e-1231.90Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400002090 PE=4 SV=1[more]
A0A0D2R9I1_GOSRA9.5e-1231.48Uncharacterized protein OS=Gossypium raimondii GN=B456_010G176400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778664869|ref|XP_011648423.1|4.3e-106100.00PREDICTED: uncharacterized protein LOC105434456 [Cucumis sativus][more]
gi|659067829|ref|XP_008441503.1|1.5e-9088.08PREDICTED: uncharacterized protein LOC103485604 [Cucumis melo][more]
gi|720077148|ref|XP_010240944.1|2.2e-1430.77PREDICTED: protein NDR1-like [Nelumbo nucifera][more]
gi|567913591|ref|XP_006449109.1|3.8e-1431.02hypothetical protein CICLE_v10017718mg [Citrus clementina][more]
gi|641856801|gb|KDO75567.1|8.5e-1431.02hypothetical protein CISIN_1g028713mg [Citrus sinensis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU133305cucumber EST collection version 3.0transcribed_cluster
CU142667cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G064770.1Csa1G064770.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU142667CU142667transcribed_cluster
CU133305CU133305transcribed_cluster


The following gene(s) are paralogous to this gene:

None