CsGy1G010920 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G010920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	NDR1/HIN1-Like protein 3-like isoform X1
Location	Chr1 : 6870928 .. 6871509 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTCCAAGAGAGGCGGCTCCAATTCTGATATCTACATATGGTTTCTTCAGGTTCTAACAATTCTAGTATTGGCTTTCTTGGCCATATGGGCCACTCTAACCCCTAGAACTCCTACTTTCACCATCACCAATATGGATTTGAAGCCATATATTCGAAACGACACCGCTCTCGCAACCACAAACTCTTCTTTCTTAGCCTTTAATGTGACCATCTCAAATCCCAACAAAATGATTGGTGTTTTCTTGGATGAGATTAATGTAACAATAGGCTGCAACAACGAGAGCCTAATTGGGTCGAGGTCGTGGTCGAAGTCAATGACAGGATTTTATTTGGGGCACAGCGTAAGTGATTTGAAGGAGGTTGACTTGAGTGTTGATGATAATGAATTGTCATTGTGTAGGAAAGTGGATTATTATTTGAGGGTTGGGGTGGATACGGGTGTTAGATATAAGATTATGTGGTTCATAACCAGGCATCATGGGTTAGTTTTTGAAGATTATATTGAAATTGGCTACGGTCATGGGCAAATGCTAGGAACAACACAAATGAAGTTAAAGCTAAGTTTTACCAATTTGTAG

mRNA sequence

ATGACTTCCAAGAGAGGCGGCTCCAATTCTGATATCTACATATGGTTTCTTCAGGTTCTAACAATTCTAGTATTGGCTTTCTTGGCCATATGGGCCACTCTAACCCCTAGAACTCCTACTTTCACCATCACCAATATGGATTTGAAGCCATATATTCGAAACGACACCGCTCTCGCAACCACAAACTCTTCTTTCTTAGCCTTTAATGTGACCATCTCAAATCCCAACAAAATGATTGGTGTTTTCTTGGATGAGATTAATGTAACAATAGGCTGCAACAACGAGAGCCTAATTGGGTCGAGGTCGTGGTCGAAGTCAATGACAGGATTTTATTTGGGGCACAGCGTAAGTGATTTGAAGGAGGTTGACTTGAGTGTTGATGATAATGAATTGTCATTGTGTAGGAAAGTGGATTATTATTTGAGGGTTGGGGTGGATACGGGTGTTAGATATAAGATTATGTGGTTCATAACCAGGCATCATGGGTTAGTTTTTGAAGATTATATTGAAATTGGCTACGGTCATGGGCAAATGCTAGGAACAACACAAATGAAGTTAAAGCTAAGTTTTACCAATTTGTAG

Coding sequence (CDS)

ATGACTTCCAAGAGAGGCGGCTCCAATTCTGATATCTACATATGGTTTCTTCAGGTTCTAACAATTCTAGTATTGGCTTTCTTGGCCATATGGGCCACTCTAACCCCTAGAACTCCTACTTTCACCATCACCAATATGGATTTGAAGCCATATATTCGAAACGACACCGCTCTCGCAACCACAAACTCTTCTTTCTTAGCCTTTAATGTGACCATCTCAAATCCCAACAAAATGATTGGTGTTTTCTTGGATGAGATTAATGTAACAATAGGCTGCAACAACGAGAGCCTAATTGGGTCGAGGTCGTGGTCGAAGTCAATGACAGGATTTTATTTGGGGCACAGCGTAAGTGATTTGAAGGAGGTTGACTTGAGTGTTGATGATAATGAATTGTCATTGTGTAGGAAAGTGGATTATTATTTGAGGGTTGGGGTGGATACGGGTGTTAGATATAAGATTATGTGGTTCATAACCAGGCATCATGGGTTAGTTTTTGAAGATTATATTGAAATTGGCTACGGTCATGGGCAAATGCTAGGAACAACACAAATGAAGTTAAAGCTAAGTTTTACCAATTTGTAG

Protein sequence

MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLKEVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQMKLKLSFTNL

Homology

[Close]

BLAST of CsGy1G010920 vs. NCBI nr
Match: XP_011648423.1 (PREDICTED: uncharacterized protein LOC105434456 [Cucumis sativus] >KGN64555.1 Harpin inducing protein 1-like 9 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 1.6e-104
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60
           MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT
Sbjct: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60

Query: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLK 120
           TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSM GFYLGHSVSDLK
Sbjct: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK 120

Query: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180
           EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG
Sbjct: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180

Query: 181 TTQMKLKLSFTNL 194
           TTQMKLKLSFTNL
Sbjct: 181 TTQMKLKLSFTNL 193

[Close]

BLAST of CsGy1G010920 vs. NCBI nr
Match: XP_008441503.1 (PREDICTED: NDR1/HIN1-Like protein 3-like isoform X2 [Cucumis melo] >XP_016899081.1 PREDICTED: NDR1/HIN1-Like protein 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 336.7 bits (862), Expect = 5.4e-89
Identity = 169/193 (87.56%), Postives = 179/193 (92.75%), Query Frame = 0


Query: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60
           MTSKR GS+ DIYIWFLQVLTILVLA LAIWATLTP+TPTFTITNMDLKPYIRNDT L  
Sbjct: 1   MTSKR-GSHCDIYIWFLQVLTILVLASLAIWATLTPKTPTFTITNMDLKPYIRNDTVLG- 60

Query: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLK 120
           TNSSFLAFNVTISNPNKM GVFLDEINVTIGCNNES+ GSRSWSKS+ GFYLGHSVSDLK
Sbjct: 61  TNSSFLAFNVTISNPNKMTGVFLDEINVTIGCNNESVTGSRSWSKSVAGFYLGHSVSDLK 120

Query: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180
           EVDLSV+DNEL LCRKVDYYL+V ++TGVRYK+MWF TRH  LVFEDY+EIGYGHGQMLG
Sbjct: 121 EVDLSVEDNELLLCRKVDYYLKVELETGVRYKVMWFKTRHRRLVFEDYVEIGYGHGQMLG 180

Query: 181 TTQMKLKLSFTNL 194
           TTQMKLKLSFTNL
Sbjct: 181 TTQMKLKLSFTNL 191

[Close]

BLAST of CsGy1G010920 vs. NCBI nr
Match: XP_022140153.1 (cysteine-rich receptor-like protein kinase 10 [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 5.3e-36
Identity = 88/161 (54.66%), Postives = 120/161 (74.53%), Query Frame = 0


Query: 10  SDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLAFN 69
           + +YIWFLQV+T+L L  LAIWA++TP+TPTF I+N+DLKP+ +NDTA A  +SS +A N
Sbjct: 16  TSVYIWFLQVVTVLGLTSLAIWASITPKTPTFAISNLDLKPH-QNDTAFA-RSSSVVALN 75

Query: 70  VTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLKEVDLSVDDN 129
           +T+SNPN+M G+F DEINVT+ C N+S+      +KS+ GFYLGH  SD KEV++SV+  
Sbjct: 76  MTVSNPNRMAGIFFDEINVTVRCKNDSV-----GAKSVPGFYLGHESSDWKEVEMSVNCG 135

Query: 130 ELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIE 171
                 +VD  LRVG++T VRYKI+ F +R+  LVFED +E
Sbjct: 136 AAD--GRVD--LRVGLETRVRYKILRFKSRNRRLVFEDCVE 165

[Close]

BLAST of CsGy1G010920 vs. NCBI nr
Match: XP_018850494.1 (PREDICTED: protein NDR1-like [Juglans regia])

HSP 1 Score: 85.1 bits (209), Expect = 2.8e-13
Identity = 54/175 (30.86%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 12  IYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLAFNVT 71
           IY+W  QV+++L+L+ + IW  LTP++P   IT+  +      ++     +++ +  N  
Sbjct: 25  IYVWIFQVVSVLILSSVVIWLCLTPKSPICIITHAYIPALDGGNSTSYHPHNTSILLNFE 84

Query: 72  ISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLKEVDLSVDDNEL 131
             NPNK +G++  +I +T+ C ++++IG    S S+  FY G+ ++   EV +S D    
Sbjct: 85  FLNPNKRMGIYYKDICITLYC-SDAVIG----SNSLPDFYQGYRMTTAYEVLVSADRQFC 144

Query: 132 SLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQMKL 187
                    L+V +++ V+YKI    T+HH L  E Y+ IG  +G+M G   +KL
Sbjct: 145 KGITDGTAPLKVCLESVVKYKIFRSKTKHHRLFNEAYLRIG-SNGRMSGEKNIKL 193

[Close]

BLAST of CsGy1G010920 vs. NCBI nr
Match: OVA11156.1 (Late embryogenesis abundant protein [Macleaya cordata])

HSP 1 Score: 85.1 bits (209), Expect = 2.8e-13
Identity = 56/184 (30.43%), Postives = 95/184 (51.63%), Query Frame = 0


Query: 8   SNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLA 67
           S    Y+W LQV+ ++ L  + IW  L P+TP +T+    +      ++A     ++ L 
Sbjct: 9   SRFGFYVWLLQVMIVIGLTSVVIWLCLHPKTPNYTVVGFYVPGLDGQNSAGNVHRNTTLI 68

Query: 68  FNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLKEVDLS-V 127
             + ISNPNK +G++ D+ NV +   N+++  S     S+ GFY GH  +  +EV ++ V
Sbjct: 69  LKLRISNPNKGMGIYYDDNNVALYYGNDNIGVS-----SILGFYQGHKKTTQREVSVNGV 128

Query: 128 DDNELSLCRKVD---YYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQ 187
           +    ++ R V      LRV + +G RYKI W+ TRHH L  +  + +    G+      
Sbjct: 129 EQFWRAVFRVVSNGTVDLRVSLVSGFRYKIFWWKTRHHRLDLQALVPVAL-DGKTFDEMN 186

[Close]

BLAST of CsGy1G010920 vs. TrEMBL
Match: tr|A0A0A0LRN3|A0A0A0LRN3_CUCSA (Harpin inducing protein 1-like 9 OS=Cucumis sativus OX=3659 GN=Csa_1G064770 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.0e-104
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60
           MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT
Sbjct: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60

Query: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLK 120
           TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSM GFYLGHSVSDLK
Sbjct: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMAGFYLGHSVSDLK 120

Query: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180
           EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG
Sbjct: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180

Query: 181 TTQMKLKLSFTNL 194
           TTQMKLKLSFTNL
Sbjct: 181 TTQMKLKLSFTNL 193

[Close]

BLAST of CsGy1G010920 vs. TrEMBL
Match: tr|A0A1S3B3M5|A0A1S3B3M5_CUCME (NDR1/HIN1-Like protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485604 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.6e-89
Identity = 169/193 (87.56%), Postives = 179/193 (92.75%), Query Frame = 0


Query: 1   MTSKRGGSNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALAT 60
           MTSKR GS+ DIYIWFLQVLTILVLA LAIWATLTP+TPTFTITNMDLKPYIRNDT L  
Sbjct: 1   MTSKR-GSHCDIYIWFLQVLTILVLASLAIWATLTPKTPTFTITNMDLKPYIRNDTVLG- 60

Query: 61  TNSSFLAFNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLK 120
           TNSSFLAFNVTISNPNKM GVFLDEINVTIGCNNES+ GSRSWSKS+ GFYLGHSVSDLK
Sbjct: 61  TNSSFLAFNVTISNPNKMTGVFLDEINVTIGCNNESVTGSRSWSKSVAGFYLGHSVSDLK 120

Query: 121 EVDLSVDDNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLG 180
           EVDLSV+DNEL LCRKVDYYL+V ++TGVRYK+MWF TRH  LVFEDY+EIGYGHGQMLG
Sbjct: 121 EVDLSVEDNELLLCRKVDYYLKVELETGVRYKVMWFKTRHRRLVFEDYVEIGYGHGQMLG 180

Query: 181 TTQMKLKLSFTNL 194
           TTQMKLKLSFTNL
Sbjct: 181 TTQMKLKLSFTNL 191

[Close]

BLAST of CsGy1G010920 vs. TrEMBL
Match: tr|A0A200QKZ6|A0A200QKZ6_9MAGN (Late embryogenesis abundant protein OS=Macleaya cordata OX=56857 GN=BVC80_1741g161 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-13
Identity = 56/184 (30.43%), Postives = 95/184 (51.63%), Query Frame = 0


Query: 8   SNSDIYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLA 67
           S    Y+W LQV+ ++ L  + IW  L P+TP +T+    +      ++A     ++ L 
Sbjct: 9   SRFGFYVWLLQVMIVIGLTSVVIWLCLHPKTPNYTVVGFYVPGLDGQNSAGNVHRNTTLI 68

Query: 68  FNVTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLKEVDLS-V 127
             + ISNPNK +G++ D+ NV +   N+++  S     S+ GFY GH  +  +EV ++ V
Sbjct: 69  LKLRISNPNKGMGIYYDDNNVALYYGNDNIGVS-----SILGFYQGHKKTTQREVSVNGV 128

Query: 128 DDNELSLCRKVD---YYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQ 187
           +    ++ R V      LRV + +G RYKI W+ TRHH L  +  + +    G+      
Sbjct: 129 EQFWRAVFRVVSNGTVDLRVSLVSGFRYKIFWWKTRHHRLDLQALVPVAL-DGKTFDEMN 186

[Close]

BLAST of CsGy1G010920 vs. TrEMBL
Match: tr|A0A2I4H2Z4|A0A2I4H2Z4_9ROSI (protein NDR1-like OS=Juglans regia OX=51240 GN=LOC109013031 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.9e-13
Identity = 54/175 (30.86%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 12  IYIWFLQVLTILVLAFLAIWATLTPRTPTFTITNMDLKPYIRNDTALATTNSSFLAFNVT 71
           IY+W  QV+++L+L+ + IW  LTP++P   IT+  +      ++     +++ +  N  
Sbjct: 25  IYVWIFQVVSVLILSSVVIWLCLTPKSPICIITHAYIPALDGGNSTSYHPHNTSILLNFE 84

Query: 72  ISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLKEVDLSVDDNEL 131
             NPNK +G++  +I +T+ C ++++IG    S S+  FY G+ ++   EV +S D    
Sbjct: 85  FLNPNKRMGIYYKDICITLYC-SDAVIG----SNSLPDFYQGYRMTTAYEVLVSADRQFC 144

Query: 132 SLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQMKL 187
                    L+V +++ V+YKI    T+HH L  E Y+ IG  +G+M G   +KL
Sbjct: 145 KGITDGTAPLKVCLESVVKYKIFRSKTKHHRLFNEAYLRIG-SNGRMSGEKNIKL 193

[Close]

BLAST of CsGy1G010920 vs. TrEMBL
Match: tr|A0A1U8QBD6|A0A1U8QBD6_NELNU (protein NDR1-like OS=Nelumbo nucifera OX=4432 GN=LOC104585683 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.2e-13
Identity = 56/182 (30.77%), Postives = 101/182 (55.49%), Query Frame = 0


Query: 15  WFLQVLTILVLAFLAIWATLTPRTPTFTITN-----MDLKPYIRNDTALATTNSSFLAFN 74
           W LQV+ +L LA + +W +L P+ PT+TI +     +D+K    ++ +  + N+S L F+
Sbjct: 17  WILQVIIVLSLASVVVWLSLRPKCPTYTIVDAYIPALDVKSATSHENSETSRNNS-LFFS 76

Query: 75  VTISNPNKMIGVFLDEINVTIGCNNESLIGSRSWSKSMTGFYLGHSVSDLKEVDLSVD-- 134
           + I NPNK IG++ DEIN+++    +++IG      S+  FY GH  +  +EV L+ D  
Sbjct: 77  LEIRNPNKGIGIYYDEINLSV-YYGDAVIG----LSSVFSFYQGHRKTARREVRLNADLQ 136

Query: 135 ---DNELSLCRKVDYYLRVGVDTGVRYKIMWFITRHHGLVFEDYIEIGYGHGQMLGTTQM 187
              D   ++  +    LRVG+   +R+KI    T+H  +  +  +++G   G+++G  + 
Sbjct: 137 FLRDVSRAVSSQGSVDLRVGLAAAIRFKIFSSKTKHQNMELQANLQVG-SDGKLVGENKK 191

The following BLAST results are available for this feature:

BLAST of CsGy1G010920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648423.1	1.6e-104	99.48	PREDICTED: uncharacterized protein LOC105434456 [Cucumis sativus] >KGN64555.1 Ha...	[more]
XP_008441503.1	5.4e-89	87.56	PREDICTED: NDR1/HIN1-Like protein 3-like isoform X2 [Cucumis melo] >XP_016899081...	[more]
XP_022140153.1	5.3e-36	54.66	cysteine-rich receptor-like protein kinase 10 [Momordica charantia]	[more]
XP_018850494.1	2.8e-13	30.86	PREDICTED: protein NDR1-like [Juglans regia]	[more]
OVA11156.1	2.8e-13	30.43	Late embryogenesis abundant protein [Macleaya cordata]	[more]

BLAST of CsGy1G010920 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy1G010920 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G010920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRN3\|A0A0A0LRN3_CUCSA	1.0e-104	99.48	Harpin inducing protein 1-like 9 OS=Cucumis sativus OX=3659 GN=Csa_1G064770 PE=4...	[more]
tr\|A0A1S3B3M5\|A0A1S3B3M5_CUCME	3.6e-89	87.56	NDR1/HIN1-Like protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485604...	[more]
tr\|A0A200QKZ6\|A0A200QKZ6_9MAGN	1.9e-13	30.43	Late embryogenesis abundant protein OS=Macleaya cordata OX=56857 GN=BVC80_1741g1...	[more]
tr\|A0A2I4H2Z4\|A0A2I4H2Z4_9ROSI	1.9e-13	30.86	protein NDR1-like OS=Juglans regia OX=51240 GN=LOC109013031 PE=4 SV=1	[more]
tr\|A0A1U8QBD6\|A0A1U8QBD6_NELNU	4.2e-13	30.77	protein NDR1-like OS=Nelumbo nucifera OX=4432 GN=LOC104585683 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G010920.1	CsGy1G010920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 11..171

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G010920	Cla019409	Watermelon (97103) v1	cgybwmB010
CsGy1G010920	Csa1G064770	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G010920	MELO3C002487	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G010920	ClCG03G005020	Watermelon (Charleston Gray)	cgybwcgB033
CsGy1G010920	CSPI01G11020	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G010920	CmaCh18G002360	Cucurbita maxima (Rimu)	cgybcmaB093
CsGy1G010920	CmoCh18G002960	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G010920	MELO3C002487.2	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G010920	CsaV3_1G011100	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G010920	Cla97C03G056200	Watermelon (97103) v2	cgybwmbB032
CsGy1G010920	Bhi08G001443	Wax gourd	cgybwgoB048
CsGy1G010920	Carg26534	Silver-seed gourd	carcgybB0788

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G010920	Cucumber (Gy14) v2	cgybcgybB035
CsGy1G010920	Cucurbita maxima (Rimu)	cgybcmaB074
CsGy1G010920	Cucurbita maxima (Rimu)	cgybcmaB126
CsGy1G010920	Cucurbita maxima (Rimu)	cgybcmaB142
CsGy1G010920	Cucurbita moschata (Rifu)	cgybcmoB068
CsGy1G010920	Cucurbita moschata (Rifu)	cgybcmoB116
CsGy1G010920	Cucurbita moschata (Rifu)	cgybcmoB133
CsGy1G010920	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G010920	Cucurbita pepo (Zucchini)	cgybcpeB023
CsGy1G010920	Cucurbita pepo (Zucchini)	cgybcpeB070
CsGy1G010920	Cucumber (Chinese Long) v2	cgybcuB039
CsGy1G010920	Bottle gourd (USVL1VR-Ls)	cgyblsiB015
CsGy1G010920	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G010920	Melon (DHL92) v3.5.1	cgybmeB076
CsGy1G010920	Melon (DHL92) v3.6.1	cgybmedB072
CsGy1G010920	Watermelon (Charleston Gray)	cgybwcgB013
CsGy1G010920	Watermelon (97103) v1	cgybwmB044
CsGy1G010920	Wild cucumber (PI 183967)	cgybcpiB037
CsGy1G010920	Silver-seed gourd	carcgybB0637
CsGy1G010920	Silver-seed gourd	carcgybB0919
CsGy1G010920	Silver-seed gourd	carcgybB0992
CsGy1G010920	Cucumber (Chinese Long) v3	cgybcucB045
CsGy1G010920	Watermelon (97103) v2	cgybwmbB002
CsGy1G010920	Wax gourd	cgybwgoB020