Csa1G059740 (gene) Cucumber (Chinese Long) v2

NameCsa1G059740
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 6504574 .. 6504942 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGCTGGGGATCCAAAAGCGTGTCAGTGGATGTTCTGATAGTGAAATTGGAGGAAACGGTTAAGAAGCTGAAAAGCGTTAGCGGAAAAACTGCTGATTTGGTGATCAGTGGTTCTTTATTGGCTTGGTTTTTTTCTGCTTGCAATCAGCTGGAGGCTTGGACTAACGAGCTTTTGTCCACATTAAACAAATTAAGCTTACCCAACCCCACATTATCACTTTTCAACGGAGAACTCATTTCCAAAAATAACCTCAATTCCATCTCTAAACCGCCAACTTCTAAGGATACTGAAGCCCGTGGCAAGAAGAGGTCAACTAGCCTCGACGACACCACCCAAGAGGAGCCGAAAACCAAACGGTCATGA

mRNA sequence

ATGGAGGGCTGGGGATCCAAAAGCGTGTCAGTGGATGTTCTGATAGTGAAATTGGAGGAAACGGTTAAGAAGCTGAAAAGCGTTAGCGGAAAAACTGCTGATTTGGTGATCAGTGGTTCTTTATTGGCTTGGTTTTTTTCTGCTTGCAATCAGCTGGAGGCTTGGACTAACGAGCTTTTGTCCACATTAAACAAATTAAGCTTACCCAACCCCACATTATCACTTTTCAACGGAGAACTCATTTCCAAAAATAACCTCAATTCCATCTCTAAACCGCCAACTTCTAAGGATACTGAAGCCCGTGGCAAGAAGAGGTCAACTAGCCTCGACGACACCACCCAAGAGGAGCCGAAAACCAAACGGTCATGA

Coding sequence (CDS)

ATGGAGGGCTGGGGATCCAAAAGCGTGTCAGTGGATGTTCTGATAGTGAAATTGGAGGAAACGGTTAAGAAGCTGAAAAGCGTTAGCGGAAAAACTGCTGATTTGGTGATCAGTGGTTCTTTATTGGCTTGGTTTTTTTCTGCTTGCAATCAGCTGGAGGCTTGGACTAACGAGCTTTTGTCCACATTAAACAAATTAAGCTTACCCAACCCCACATTATCACTTTTCAACGGAGAACTCATTTCCAAAAATAACCTCAATTCCATCTCTAAACCGCCAACTTCTAAGGATACTGAAGCCCGTGGCAAGAAGAGGTCAACTAGCCTCGACGACACCACCCAAGAGGAGCCGAAAACCAAACGGTCATGA

Protein sequence

MEGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELLSTLNKLSLPNPTLSLFNGELISKNNLNSISKPPTSKDTEARGKKRSTSLDDTTQEEPKTKRS*
BLAST of Csa1G059740 vs. TrEMBL
Match: A0A0A0LRI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059740 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.2e-61
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1

Query: 1   MEGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELL 60
           MEGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELL
Sbjct: 1   MEGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELL 60

Query: 61  STLNKLSLPNPTLSLFNGELISKNNLNSISKPPTSKDTEARGKKRSTSLDDTTQEEPKTK 120
           STLNKLSLPNPTLSLFNGELISKNNLNSISKPPTSKDTEARGKKRSTSLDDTTQEEPKTK
Sbjct: 61  STLNKLSLPNPTLSLFNGELISKNNLNSISKPPTSKDTEARGKKRSTSLDDTTQEEPKTK 120

Query: 121 RS 123
           RS
Sbjct: 121 RS 122

BLAST of Csa1G059740 vs. NCBI nr
Match: gi|700209399|gb|KGN64495.1| (hypothetical protein Csa_1G059740 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.3e-60
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1

Query: 1   MEGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELL 60
           MEGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELL
Sbjct: 1   MEGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELL 60

Query: 61  STLNKLSLPNPTLSLFNGELISKNNLNSISKPPTSKDTEARGKKRSTSLDDTTQEEPKTK 120
           STLNKLSLPNPTLSLFNGELISKNNLNSISKPPTSKDTEARGKKRSTSLDDTTQEEPKTK
Sbjct: 61  STLNKLSLPNPTLSLFNGELISKNNLNSISKPPTSKDTEARGKKRSTSLDDTTQEEPKTK 120

Query: 121 RS 123
           RS
Sbjct: 121 RS 122

BLAST of Csa1G059740 vs. NCBI nr
Match: gi|659067697|ref|XP_008440827.1| (PREDICTED: uncharacterized protein LOC103485133 isoform X1 [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 4.0e-25
Identity = 74/128 (57.81%), Postives = 89/128 (69.53%), Query Frame = 1

Query: 1   MEGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELL 60
           ME W S++VSV  LIVKLEETVKK+KSVSGK A   IS  LLAWF SA NQLEA TNE+ 
Sbjct: 12  MEDWSSRNVSVHFLIVKLEETVKKMKSVSGKKA---ISDCLLAWFSSAYNQLEARTNEVF 71

Query: 61  STLNKLSLPNPTLSLFNGELI-----SKNNLNSISKPPTSKDTEARGKK--RSTSLDDTT 120
           S LNKL LP     ++N  LI     S NN NSISKP  ++DT++ G++  RS SLDDT+
Sbjct: 72  SKLNKLPLPYIPAPIWNVGLIAISSPSNNNSNSISKPGPTEDTQSHGRRRTRSPSLDDTS 131

Query: 121 QEEPKTKR 122
           + E + KR
Sbjct: 132 EHEHRDKR 136

BLAST of Csa1G059740 vs. NCBI nr
Match: gi|659067697|ref|XP_008440827.1| (PREDICTED: uncharacterized protein LOC103485133 isoform X1 [Cucumis melo])

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-08
Identity = 49/123 (39.84%), Postives = 68/123 (55.28%), Query Frame = 1

Query: 2   EGWGSKSVSVDVLIVKLEETVKKLKSVSGKTADLVISGSLLAWFFSACNQLEAWTNELL- 61
           EGW S    +D LI ++EE VKKLK V GK     ++G LLA F SA  QLE WT +LL 
Sbjct: 141 EGWSSGVDRLDDLIERVEELVKKLKGVDGKKDS--VNGPLLASFMSAFTQLENWTEQLLS 200

Query: 62  -STLNKLSLPNPTLSLFNGELISKNNLNSISKPPTSKDTEARGKKR--STSLDDTTQEEP 121
            ST+N+ S P+        +L + NN +   +        +RGKK   S S D+ ++E+ 
Sbjct: 201 ASTVNEPSSPS--------KLSASNNSDPNIEVGPDTPENSRGKKTSGSNSRDNRSEEKR 253

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LRI0_CUCSA9.2e-61100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059740 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209399|gb|KGN64495.1|1.3e-60100.00hypothetical protein Csa_1G059740 [Cucumis sativus][more]
gi|659067697|ref|XP_008440827.1|4.0e-2557.81PREDICTED: uncharacterized protein LOC103485133 isoform X1 [Cucumis melo][more]
gi|659067697|ref|XP_008440827.1|2.6e-0839.84PREDICTED: uncharacterized protein LOC103485133 isoform X1 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G059740.1Csa1G059740.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G059740MELO3C002436Melon (DHL92) v3.5.1cumeB027
Csa1G059740MELO3C002436.2Melon (DHL92) v3.6.1cumedB022
Csa1G059740CSPI01G10380Wild cucumber (PI 183967)cpicuB000
Csa1G059740CsGy1G010380Cucumber (Gy14) v2cgybcuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G059740Cucurbita maxima (Rimu)cmacuB218
Csa1G059740Cucurbita maxima (Rimu)cmacuB397
Csa1G059740Cucurbita maxima (Rimu)cmacuB649
Csa1G059740Cucurbita maxima (Rimu)cmacuB848
Csa1G059740Cucurbita moschata (Rifu)cmocuB203
Csa1G059740Cucurbita moschata (Rifu)cmocuB380
Csa1G059740Cucurbita moschata (Rifu)cmocuB637
Csa1G059740Cucurbita moschata (Rifu)cmocuB835
Csa1G059740Melon (DHL92) v3.5.1cumeB024
Csa1G059740Melon (DHL92) v3.5.1cumeB026
Csa1G059740Melon (DHL92) v3.5.1cumeB083
Csa1G059740Watermelon (Charleston Gray)cuwcgB012
Csa1G059740Watermelon (Charleston Gray)cuwcgB035
Csa1G059740Watermelon (97103) v1cuwmB008
Csa1G059740Watermelon (97103) v1cuwmB043
Csa1G059740Cucurbita pepo (Zucchini)cpecuB029
Csa1G059740Cucurbita pepo (Zucchini)cpecuB055
Csa1G059740Cucurbita pepo (Zucchini)cpecuB474
Csa1G059740Cucurbita pepo (Zucchini)cpecuB506
Csa1G059740Bottle gourd (USVL1VR-Ls)culsiB019
Csa1G059740Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G059740Bottle gourd (USVL1VR-Ls)culsiB040
Csa1G059740Cucumber (Gy14) v2cgybcuB239
Csa1G059740Melon (DHL92) v3.6.1cumedB021
Csa1G059740Melon (DHL92) v3.6.1cumedB077
Csa1G059740Silver-seed gourdcarcuB0523
Csa1G059740Silver-seed gourdcarcuB0661
Csa1G059740Silver-seed gourdcarcuB0945
Csa1G059740Silver-seed gourdcarcuB1020
Csa1G059740Watermelon (97103) v2cuwmbB000
Csa1G059740Watermelon (97103) v2cuwmbB032
Csa1G059740Wax gourdcuwgoB033
Csa1G059740Cucumber (Chinese Long) v2cucuB035
Csa1G059740Cucumber (Gy14) v1cgycuB015
Csa1G059740Cucumber (Gy14) v1cgycuB087