Csa1G033290 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGAAAAAAGAGAAGATTGAGAGAACCAAAGTGAGGGAAATGGGAAAGAAAGCAAAGAAGAGGAAGATCAAAGAAAAAAAGGGGAAAACCCAAGTGAGGAAAGAGGCAAGAGAAAGTGTAGAGGGGGAGGTACGATATGAATCGCACCGACAATGAGTAAATGAATGAAGAAGAAGAAGAAGAAGAAGAAAAGGAAGATATGGAGGAAGTTAAAAGGGAAGGGACTGGCGGAAAGGGAGAATGGCGGGCAGCAAAACAGGAAAGGCAAAGGCAAAGGCAAAGGCGAAGGCATTCAATCCTCTGCTTACAAGATCGCACGAAAGGTCAGCCTAAGATTTCGGCCGTGAAAATTAGAGCAACCGATCAGCAAAATTTGTTTCTTTTTCAACCCCTCCTCCCTCCCCTTCCTTT ATGCGGAAAAAAGAGAAGATTGAGAGAACCAAAGTGAGGGAAATGGGAAAGAAAGCAAAGAAGAGGAAGATCAAAGAAAAAAAGGGGAAAACCCAAGTGAGGAAAGAGGCAAGAGAAAGTGTAGAGGGGGAGAAGAAGAAGAAGAAGAAGAAAAGGAAGATATGGAGGAAGTTAAAAGGGAAGGGACTGGCGGAAAGGGAGAATGGCGGGCAGCAAAACAGGAAAGGCAAAGGCAAAGGCAAAGGCGAAGGCATTCAATCCTCTGCTTACAAGATCGCACGAAAGGTCAGCCTAAGATTTCGGCCGTGA ATGCGGAAAAAAGAGAAGATTGAGAGAACCAAAGTGAGGGAAATGGGAAAGAAAGCAAAGAAGAGGAAGATCAAAGAAAAAAAGGGGAAAACCCAAGTGAGGAAAGAGGCAAGAGAAAGTGTAGAGGGGGAGAAGAAGAAGAAGAAGAAGAAAAGGAAGATATGGAGGAAGTTAAAAGGGAAGGGACTGGCGGAAAGGGAGAATGGCGGGCAGCAAAACAGGAAAGGCAAAGGCAAAGGCAAAGGCGAAGGCATTCAATCCTCTGCTTACAAGATCGCACGAAAGGTCAGCCTAAGATTTCGGCCGTGA MRKKEKIERTKVREMGKKAKKRKIKEKKGKTQVRKEARESVEGEKKKKKKKRKIWRKLKGKGLAERENGGQQNRKGKGKGKGEGIQSSAYKIARKVSLRFRP*
BLAST of Csa1G033290 vs. TrEMBL
Match: A0A0A0LQ62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G033290 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 2.3e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of Csa1G033290 vs. TrEMBL
Match: L2FIG0_COLGN (Uncharacterized protein OS=Colletotrichum gloeosporioides (strain Nara gc5) GN=CGGC5_13303 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.3e-07 Identity = 32/83 (38.55%), Postives = 55/83 (66.27%), Query Frame = 1
BLAST of Csa1G033290 vs. TrEMBL
Match: L2FIG0_COLGN (Uncharacterized protein OS=Colletotrichum gloeosporioides (strain Nara gc5) GN=CGGC5_13303 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 9.2e-06 Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 1
HSP 2 Score: 60.8 bits (146), Expect = 1.1e-06 Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 1
BLAST of Csa1G033290 vs. TrEMBL
Match: A0A0F5LTM3_9RHIZ (Uncharacterized protein OS=Devosia limi DSM 17137 GN=VW29_06085 PE=4 SV=1) HSP 1 Score: 42.0 bits (97), Expect = 5.2e-01 Identity = 32/112 (28.57%), Postives = 58/112 (51.79%), Query Frame = 1
HSP 2 Score: 59.3 bits (142), Expect = 3.2e-06 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 1
BLAST of Csa1G033290 vs. TrEMBL
Match: A0A131Y4D5_IXORI (Putative splicing factor sr protein (Fragment) OS=Ixodes ricinus PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-06 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 1
BLAST of Csa1G033290 vs. TAIR10
Match: AT5G60530.1 (AT5G60530.1 late embryogenesis abundant protein-related / LEA protein-related) HSP 1 Score: 50.1 bits (118), Expect = 9.7e-07 Identity = 27/82 (32.93%), Postives = 46/82 (56.10%), Query Frame = 1
HSP 2 Score: 38.9 bits (89), Expect = 2.2e-03 Identity = 26/96 (27.08%), Postives = 49/96 (51.04%), Query Frame = 1
BLAST of Csa1G033290 vs. NCBI nr
Match: gi|700208914|gb|KGN64010.1| (hypothetical protein Csa_1G033290 [Cucumis sativus]) HSP 1 Score: 202.6 bits (514), Expect = 3.3e-49 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1
BLAST of Csa1G033290 vs. NCBI nr
Match: gi|944296430|gb|KQL59787.1| (hypothetical protein AAES_18561 [Amazona aestiva]) HSP 1 Score: 66.6 bits (161), Expect = 2.8e-08 Identity = 37/100 (37.00%), Postives = 61/100 (61.00%), Query Frame = 1
BLAST of Csa1G033290 vs. NCBI nr
Match: gi|944296430|gb|KQL59787.1| (hypothetical protein AAES_18561 [Amazona aestiva]) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 1
HSP 2 Score: 62.4 bits (150), Expect = 5.4e-07 Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = 1
BLAST of Csa1G033290 vs. NCBI nr
Match: gi|449278783|gb|EMC86543.1| (Dynein heavy chain-like protein [Columba livia]) HSP 1 Score: 60.1 bits (144), Expect = 2.7e-06 Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 1
HSP 2 Score: 61.2 bits (147), Expect = 1.2e-06 Identity = 37/93 (39.78%), Postives = 62/93 (66.67%), Query Frame = 1
BLAST of Csa1G033290 vs. NCBI nr
Match: gi|565312882|gb|ETE65356.1| (DNA ligase 1, partial [Ophiophagus hannah]) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-05 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 1
HSP 2 Score: 47.8 bits (112), Expect = 1.4e-02 Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 1
HSP 3 Score: 45.4 bits (106), Expect = 6.8e-02 Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 1
HSP 4 Score: 60.8 bits (146), Expect = 1.6e-06 Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |