Csa1G027510 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G027510
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Transcription factor, putative
Location	Chr1 : 3029311 .. 3030999 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGAAAAAGAAAAAAGACTGTTAAGAGAGGTTGTTACGGTGAAGGAGAGGAGCGGCGTGTGTTCAAGTGTCGTGCATGCATTTTATGCATCTGTTGCTTTGCATGCACTCTCTTCTCTCTCCATTGCACTGCTAACTGCTAAAAAGCCTTCTCCCCTGATCTCCTTCCATGGCCTCATTTCTCTCTCCCCATTCCTCCCCCTCTCTCACTCTCTTCTCTAAACCTCTTTTATTTTAGGGTTTTCTTTTGCTTGATCTCCACTTCTATGGCCTCCAACCGCTGCATGAACACGTCTTGCCCAGCCCCCACCTCCCTACACTGGACCAAAGGATGGCCTCTGGGATCCGCCGGATTCGCAAATCTCTGCCTTAACTGCGGGTATTTTCCCTTCTATTTCTTCATTTGATTTTCCCACCCCAGTTTCCTTAAATGCATTCCTTTCTTTCCCTTTTCCCTCTACCCATCTTATATATCAAAATTCCTAATATTGCCCTTCCCCCTTTAACTATCTTTTCATTTACCGAAAATTACTCGCATCCTCCTATCCAAAATTTCCAATTAATTAACTAGGTCATTTAGATTTATCAATTGGTGAATATTCGTTATGACTACTTTGAGTTGAGCTTGTACTACTTAATGTCCAATTTGAGTGTGTGAAGCATAAGATGTTCCATCCACATTGACCGATTAGATGAGAGTTTAATTTCAAAGTTTGGATTATGCCTCCACATTCTCTCTGGAAAATGGGTTGCTCAAAGGGCAGGATGACAAGGAAAGTTTATACATGCATACACATAGAATTTAATTTCCTATTTCTTTTTAATAGTTATAATTAAAGAAAATATTCTCTTTTCTAGTTTCTATTCATTGCTGTCGAGAATTCTATTAAAGAATTTAAGAAGCGTGTATAACAGAGTTTCATACGGTGCAGAGGATTTTTCATTTCCTTTTATTACCACCCATACAGTTTAATCTCTTCATGTGAATCTCGCTATACATATTGAAGCTTAATTTCTCTCAGTTAATACTGATGTTTGTAATTTTGTTAGCTTTAGAGGGCAACATGTTTGTTTTCTTTTATTTTAATTTCTTTTTAAATCACTTTTTTTGTTTTGGGCTACTTTTTTACCCAGTTTATTTAGTTCCGTAGGCTGTTTAGGCTTTTATTTCATGCTACGAGGGATCTATCTTTACTTTTTTTTTTTTTTTTTATCATTGACAAGAAAAGATTTATATATTGTAGTGTTATGCTATATTAAAATTGATGTCACTATCTTCTGTATCTTCTAATCCTTCACTGTCCCTTCATACTGTGCGTGATTTAGATCCGCTTATGAAAATTTAGTCTTCTGTGATACATATCACTCAGAGGAAGCTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGGTATGCAAATGTGCTGGTAATGACCTTTAGTTTAAATGCCTTCTCTCAGTCTCAATTTATGTGTGTGCAAGTACGTATGTAGGAATCTGTCCATGTCCAATTCTAATTGTGATCTTATATGTGAAACATTTTTTCTATTTCAGAGAATTCACTGTGGGTGTATAGTTTCTAAATCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGCACAGGTTGTGTGAAAAGATCTCGACTTGGTGTGGTAAGATTGGTATCTGAATTAGCCAACTTCTGA

mRNA sequence

ATGGCCTCCAACCGCTGCATGAACACGTCTTGCCCAGCCCCCACCTCCCTACACTGGACCAAAGGATGGCCTCTGGGATCCGCCGGATTCGCAAATCTCTGCCTTAACTGCGGATCCGCTTATGAAAATTTAGTCTTCTGTGATACATATCACTCAGAGGAAGCTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGAGAATTCACTGTGGGTGTATAGTTTCTAAATCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGCACAGGTTGTGTGAAAAGATCTCGACTTGGTGTGGTAAGATTGGTATCTGAATTAGCCAACTTCTGA

Coding sequence (CDS)

ATGGCCTCCAACCGCTGCATGAACACGTCTTGCCCAGCCCCCACCTCCCTACACTGGACCAAAGGATGGCCTCTGGGATCCGCCGGATTCGCAAATCTCTGCCTTAACTGCGGATCCGCTTATGAAAATTTAGTCTTCTGTGATACATATCACTCAGAGGAAGCTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGAGAATTCACTGTGGGTGTATAGTTTCTAAATCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGCACAGGTTGTGTGAAAAGATCTCGACTTGGTGTGGTAAGATTGGTATCTGAATTAGCCAACTTCTGA

Protein sequence

MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF*

Homology

[Close]

BLAST of Csa1G027510 vs. Swiss-Prot
Match: Y7797_ORYSJ (B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os07g0679700 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.9e-33
Identity = 59/99 (59.60%), Postives = 69/99 (69.70%), Query Frame = 1


Query: 1   MASNRCMNTSC----PAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAG 60
           +A+ RCMN +C    P+P    W KGWPL S GFA LC  CG AYE LVFCD +H +E+G
Sbjct: 12  VAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLVFCDIFHQKESG 71

Query: 61  WRDCSFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRS 96
           WRDCSFCGKR+HCGCI SK+ F+ LD GG+ C  C+K S
Sbjct: 72  WRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNS 110

[Close]

BLAST of Csa1G027510 vs. Swiss-Prot
Match: VAL1_ARATH (B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL1 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 1


Query: 1  MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
          M S  CMN SC   +++ W KGWPL S   A+LC  CGSAYE+ +FC+ +H +++GWR+C
Sbjct: 6  MGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWREC 65

Query: 61 SFCGKRIHCGCIVSKSMFECLDYGGIGCTGC 92
            C KR+HCGCI SK   E +DYGG+GC+ C
Sbjct: 66 YLCSKRLHCGCIASKVTIELMDYGGVGCSTC 96

[Close]

BLAST of Csa1G027510 vs. Swiss-Prot
Match: VAL2_ARATH (B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 9.4e-26
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 1


Query: 6  CMNTSC-PAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCG 65
          CMN  C  A TS  W KGWP+ S   A+LC  CG AYE  +FC+ +H++E+GWR+C+ C 
Sbjct: 7  CMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWRECNSCD 66

Query: 66 KRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRL 98
          KR+HCGCI S+ M E L+ GG+ C  C K+S L
Sbjct: 67 KRLHCGCIASRFMMELLENGGVTCISCAKKSGL 99

[Close]

BLAST of Csa1G027510 vs. Swiss-Prot
Match: VAL3_ARATH (B3 domain-containing transcription factor VAL3 OS=Arabidopsis thaliana GN=VAL3 PE=3 SV=3)

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-19
Identity = 42/94 (44.68%), Postives = 50/94 (53.19%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           +++  C N  C      H   GW L S  F +LC  C SAYE   FCD +H   +GWR C
Sbjct: 12  LSARFCFNHECFEFKLDHCRPGWRLRSGDFVDLCDRCASAYEQGKFCDVFHQRASGWRCC 71

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKR 95
             CGKRIHCGCI S S +  +D GGI C  C ++
Sbjct: 72  ESCGKRIHCGCIASASAYTLMDAGGIECLACARK 105

[Close]

BLAST of Csa1G027510 vs. Swiss-Prot
Match: Y7633_ORYSJ (B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=3 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 6.5e-19
Identity = 43/91 (47.25%), Postives = 53/91 (58.24%), Query Frame = 1


Query: 6   CMNTSCPAPTSLH-WTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCG 65
           C N  C  P S     +GW L +  FA LC  C  ++E+  FC+T+H E AGWR+C  CG
Sbjct: 83  CFNAHCKDPKSDGPRRRGWRLRNGDFAELCDRCYHSFEHGGFCETFHLEVAGWRNCESCG 142

Query: 66  KRIHCGCIVSKSMFECLDYGGIGCTGCVKRS 96
           KR+HCGCIVS   F  LD GG+ C  C ++S
Sbjct: 143 KRLHCGCIVSVHAFVHLDAGGVECVMCARKS 173

[Close]

BLAST of Csa1G027510 vs. TrEMBL
Match: A0A0A0LT15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G027510 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 7.4e-62
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF 110
           SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF 109

[Close]

BLAST of Csa1G027510 vs. TrEMBL
Match: A0A061GYW3_THECC (High-level expression of sugar-inducible gene 2, putative isoform 1 OS=Theobroma cacao GN=TCM_042290 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.5e-33
Identity = 62/103 (60.19%), Postives = 75/103 (72.82%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           M S  CMN+SC   ++  W KGWPL S GFA+LC  CGSAYE+ V+CDT+H EE+GWR+C
Sbjct: 1   MGSKICMNSSCGTASTHEWKKGWPLRSGGFAHLCYRCGSAYEDSVYCDTFHLEESGWREC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLV 104
             CGKR+HCGCI SK + E LDYGG+GCT C   SRL  VR +
Sbjct: 61  RLCGKRLHCGCIASKYLLELLDYGGVGCTSCANSSRLHSVRRI 103

[Close]

BLAST of Csa1G027510 vs. TrEMBL
Match: M5WJ89_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001229mg PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.5e-33
Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           M S  CMN  C    +  W KGWPL S GFA+LC  CG+AYE LVFCD +H+ E+GWRDC
Sbjct: 1   MGSKICMNVLCGTTNTHEWKKGWPLRSGGFAHLCFKCGAAYEKLVFCDKFHAGESGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
           S C K +HCGCIVSKS++ECLDYGG+GC  C K S+  V++
Sbjct: 61  SLCRKPLHCGCIVSKSLYECLDYGGVGCISCAKSSQPRVIQ 101

[Close]

BLAST of Csa1G027510 vs. TrEMBL
Match: K7M884_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G204400 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-32
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 1


Query: 6   CMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCGK 65
           CMN SC    +  W KGWPL S GFA LC  CGSAYENL+FC  +H  + GWR+CSFC K
Sbjct: 6   CMNVSCKNGYAREWKKGWPLRSGGFARLCHKCGSAYENLIFCQKFHLYQTGWRECSFCNK 65

Query: 66  RIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
            +HCGCIVS SMFE LDYGGIGC  CVK S+L ++R
Sbjct: 66  TVHCGCIVSSSMFEYLDYGGIGCATCVKTSQLNLIR 101

[Close]

BLAST of Csa1G027510 vs. TrEMBL
Match: A0A0B2RFD0_GLYSO (B3 domain-containing transcription repressor VAL1 OS=Glycine soja GN=glysoja_039779 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-32
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 1


Query: 6   CMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCGK 65
           CMN SC    +  W KGWPL S GFA LC  CGSAYENL+FC  +H  + GWR+CSFC K
Sbjct: 6   CMNVSCKNGYAREWKKGWPLRSGGFARLCHKCGSAYENLIFCQKFHLYQTGWRECSFCNK 65

Query: 66  RIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
            +HCGCIVS SMFE LDYGGIGC  CVK S+L ++R
Sbjct: 66  TVHCGCIVSSSMFEYLDYGGIGCATCVKTSQLNLIR 101

[Close]

BLAST of Csa1G027510 vs. TAIR10
Match: AT2G30470.1 (AT2G30470.1 high-level expression of sugar-inducible gene 2)

HSP 1 Score: 126.7 bits (317), Expect = 8.7e-30
Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 1


Query: 1  MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
          M S  CMN SC   +++ W KGWPL S   A+LC  CGSAYE+ +FC+ +H +++GWR+C
Sbjct: 6  MGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWREC 65

Query: 61 SFCGKRIHCGCIVSKSMFECLDYGGIGCTGC 92
            C KR+HCGCI SK   E +DYGG+GC+ C
Sbjct: 66 YLCSKRLHCGCIASKVTIELMDYGGVGCSTC 96

[Close]

BLAST of Csa1G027510 vs. TAIR10
Match: AT4G32010.1 (AT4G32010.1 HSI2-like 1)

HSP 1 Score: 117.5 bits (293), Expect = 5.3e-27
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 1


Query: 6  CMNTSC-PAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCG 65
          CMN  C  A TS  W KGWP+ S   A+LC  CG AYE  +FC+ +H++E+GWR+C+ C 
Sbjct: 7  CMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWRECNSCD 66

Query: 66 KRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRL 98
          KR+HCGCI S+ M E L+ GG+ C  C K+S L
Sbjct: 67 KRLHCGCIASRFMMELLENGGVTCISCAKKSGL 99

[Close]

BLAST of Csa1G027510 vs. TAIR10
Match: AT4G21550.1 (AT4G21550.1 VP1/ABI3-like 3)

HSP 1 Score: 97.4 bits (241), Expect = 5.7e-21
Identity = 42/94 (44.68%), Postives = 50/94 (53.19%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           +++  C N  C      H   GW L S  F +LC  C SAYE   FCD +H   +GWR C
Sbjct: 12  LSARFCFNHECFEFKLDHCRPGWRLRSGDFVDLCDRCASAYEQGKFCDVFHQRASGWRCC 71

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKR 95
             CGKRIHCGCI S S +  +D GGI C  C ++
Sbjct: 72  ESCGKRIHCGCIASASAYTLMDAGGIECLACARK 105

[Close]

BLAST of Csa1G027510 vs. NCBI nr
Match: gi|700208826|gb|KGN63922.1| (hypothetical protein Csa_1G027510 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-61
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF 110
           SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF 109

[Close]

BLAST of Csa1G027510 vs. NCBI nr
Match: gi|778656628|ref|XP_011649411.1| (PREDICTED: B3 domain-containing protein Os07g0679700-like isoform X4 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 2.7e-57
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
           SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV+R
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVIR 101

[Close]

BLAST of Csa1G027510 vs. NCBI nr
Match: gi|778656619|ref|XP_011649398.1| (PREDICTED: B3 domain-containing transcription repressor VAL1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 2.7e-57
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
           SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV+R
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVIR 101

[Close]

BLAST of Csa1G027510 vs. NCBI nr
Match: gi|659114918|ref|XP_008457292.1| (PREDICTED: B3 domain-containing transcription repressor VAL1-like isoform X3 [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 1.3e-54
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAP+S HWTKGWPLGSAGFANLC NCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPSSQHWTKGWPLGSAGFANLCHNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
           SFCGKRIHCGCIVSKSMFECLDYGGIGCT CVKRSRLGV+R
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTSCVKRSRLGVIR 101

[Close]

BLAST of Csa1G027510 vs. NCBI nr
Match: gi|659114924|ref|XP_008457295.1| (PREDICTED: B3 domain-containing protein Os07g0679700-like isoform X6 [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-53
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 1


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAP+S HWTKGWPLGSAGFANLC NCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPSSQHWTKGWPLGSAGFANLCHNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV 100
           SFCGKRIHCGCIVSKSMFECLDYGGIGCT CVKRSRLGV
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTSCVKRSRLGV 99

The following BLAST results are available for this feature:

BLAST of Csa1G027510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y7797_ORYSJ	7.9e-33	59.60	B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os0...	[more]
VAL1_ARATH	1.6e-28	52.75	B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL...	[more]
VAL2_ARATH	9.4e-26	51.61	B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL...	[more]
VAL3_ARATH	1.0e-19	44.68	B3 domain-containing transcription factor VAL3 OS=Arabidopsis thaliana GN=VAL3 P...	[more]
Y7633_ORYSJ	6.5e-19	47.25	B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os0...	[more]

BLAST of Csa1G027510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT15_CUCSA	7.4e-62	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G027510 PE=4 SV=1	[more]
A0A061GYW3_THECC	1.5e-33	60.19	High-level expression of sugar-inducible gene 2, putative isoform 1 OS=Theobroma...	[more]
M5WJ89_PRUPE	9.5e-33	59.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001229mg PE=4 SV=1	[more]
K7M884_SOYBN	1.6e-32	63.54	Uncharacterized protein OS=Glycine max GN=GLYMA_14G204400 PE=4 SV=1	[more]
A0A0B2RFD0_GLYSO	1.6e-32	63.54	B3 domain-containing transcription repressor VAL1 OS=Glycine soja GN=glysoja_039...	[more]

BLAST of Csa1G027510 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30470.1	8.7e-30	52.75	high-level expression of sugar-inducible gene 2	[more]
AT4G32010.1	5.3e-27	51.61	HSI2-like 1	[more]
AT4G21550.1	5.7e-21	44.68	VP1/ABI3-like 3	[more]

BLAST of Csa1G027510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208826\|gb\|KGN63922.1\|	1.1e-61	100.00	hypothetical protein Csa_1G027510 [Cucumis sativus]	[more]
gi\|778656628\|ref\|XP_011649411.1\|	2.7e-57	99.01	PREDICTED: B3 domain-containing protein Os07g0679700-like isoform X4 [Cucumis sa...	[more]
gi\|778656619\|ref\|XP_011649398.1\|	2.7e-57	99.01	PREDICTED: B3 domain-containing transcription repressor VAL1-like isoform X1 [Cu...	[more]
gi\|659114918\|ref\|XP_008457292.1\|	1.3e-54	95.05	PREDICTED: B3 domain-containing transcription repressor VAL1-like isoform X3 [Cu...	[more]
gi\|659114924\|ref\|XP_008457295.1\|	1.1e-53	95.96	PREDICTED: B3 domain-containing protein Os07g0679700-like isoform X6 [Cucumis me...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005488	binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU174162	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G027510.1	Csa1G027510.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU174162	CU174162	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23336	ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.	coord: 1..97 score: 7.1
None	No IPR available	PANTHER	PTHR23336:SF10	B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1-RELATED	coord: 1..97 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G027510	CSPI01G04810	Wild cucumber (PI 183967)	cpicuB000
Csa1G027510	CsGy1G004690	Cucumber (Gy14) v2	cgybcuB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G027510	Cucurbita moschata (Rifu)	cmocuB417
Csa1G027510	Melon (DHL92) v3.5.1	cumeB035
Csa1G027510	Watermelon (Charleston Gray)	cuwcgB051
Csa1G027510	Watermelon (97103) v1	cuwmB026
Csa1G027510	Cucurbita pepo (Zucchini)	cpecuB533
Csa1G027510	Bottle gourd (USVL1VR-Ls)	culsiB039
Csa1G027510	Melon (DHL92) v3.6.1	cumedB030
Csa1G027510	Silver-seed gourd	carcuB0549
Csa1G027510	Watermelon (97103) v2	cuwmbB049
Csa1G027510	Wax gourd	cuwgoB063
Csa1G027510	Cucumber (Gy14) v1	cgycuB137
Csa1G027510	Cucurbita maxima (Rimu)	cmacuB428