CsGy1G004690 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G004690
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	B3 domain-containing transcription repressor VAL1-like isoform X3
Location	Chr1 : 3025979 .. 3027398 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCAACCGCTGCATGAACACGTCTTGCCCAGCCCCCACCTCCCTACACTGGACCAAAGGATGGCCTCTGGGATCCGCCGGATTCGCAAATCTCTGCCTTAACTGCGGGTATTTTCCCTTCTATTTCTTCATTTGATTTTCCCACCCCAGTTTCCTTAAATGCATTCCTTTCTTTCCCTTTTCCCTCTACCCATCTTATATATCAAAATTCCTAATATTGCCCTTCCCCCTTTAACTATCTTTTCATTTACCGAAAATTACTCGCATCCTCCTATCCAAAATTTCCAATTAATTAACTAGGTCATTTAGATTTATCAATTGGTGAATATTCGTTATGACTACTTTGAGTTGAGCTTGTACTACTTAATGTCCAATTTGAGTGTGTGAAGCATAAGATGTTCCATCCACATTGACCGATTAGATGAGAGTTTAATTTCAAAGTTTGGATTATGCCTCCACATTCTCTCTGGAAAATGGGTTGCTCAAAGGGCAGGATTGACAAGGAAAGTTTATACATGCATACACATAGAATTTAATTTCCTATTTCTTTTTAATAGTTATAATTAAAGAAAATATTCTCTTTTCTAGTTTCTATTCATTGCTGTCGAGAATTCTATTAAAGAATTTAAGAAGCGTGTATAACAGAGTTTCATACGGTGCAGAGGATTTTTCATTTCCTTTTATTACCACCCATACAGTTTAATCTCTTCATGTGAATCTCGCTATACATATTGAAGCTTAATTTCTCTCAGTTAATACTGATGTTTGTAATTTTGTTAGCTTTAGAGGGCAACATGTTTGTTTTCTTTTATTTTAATTTCTTTTTAAATCACTTTTTTTGTTTTGGGCTACTTTTTTACCCAGTTTATTTAGTTCCGTAGGCTGTTTAGGCTTTTATTTCATGCTACGAGGGATCTATCTTTACTTTTTTTTTTTTTTTTATCATTGACAAGAAAAGATTTATATATTGTAGTGTTATGCTATATTAAAATTGATGTCACTATCTTCTGTATCTTCTAATCCTTCACTGTCCCTTCATACTGTGCGTGATTTAGATCCGCTTATGAAAATTTAGTCTTCTGTGATACATATCACTCAGAGGAAGCTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGGTATGCAAATGTGCTGGTAATGACCTTTAGTTTAAATGCCTTCTCTCAGTCTCAATTTATGTGTGTGCAAGTACGTATGTAGGAATCTGTCCATGTCCAATTCTAATTGTGATCTTATATGTGAAACATTTTTTCTATTTCAGAGAATTCACTGTGGGTGTATAGTTTCTAAATCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGCACAGGTTGTGTGAAAAGATCTCGACTTGGTGTGGTAAGATTGGTATCTGAATTAGCCAACTTCTGA

mRNA sequence

ATGGCCTCCAACCGCTGCATGAACACGTCTTGCCCAGCCCCCACCTCCCTACACTGGACCAAAGGATGGCCTCTGGGATCCGCCGGATTCGCAAATCTCTGCCTTAACTGCGGATCCGCTTATGAAAATTTAGTCTTCTGTGATACATATCACTCAGAGGAAGCTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGAGAATTCACTGTGGGTGTATAGTTTCTAAATCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGCACAGGTTGTGTGAAAAGATCTCGACTTGGTGTGGTAAGATTGGTATCTGAATTAGCCAACTTCTGA

Coding sequence (CDS)

ATGGCCTCCAACCGCTGCATGAACACGTCTTGCCCAGCCCCCACCTCCCTACACTGGACCAAAGGATGGCCTCTGGGATCCGCCGGATTCGCAAATCTCTGCCTTAACTGCGGATCCGCTTATGAAAATTTAGTCTTCTGTGATACATATCACTCAGAGGAAGCTGGTTGGAGGGATTGCAGTTTTTGTGGCAAGAGAATTCACTGTGGGTGTATAGTTTCTAAATCTATGTTTGAATGTCTGGATTATGGAGGTATTGGGTGCACAGGTTGTGTGAAAAGATCTCGACTTGGTGTGGTAAGATTGGTATCTGAATTAGCCAACTTCTGA

Protein sequence

MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF

Homology

[Close]

BLAST of CsGy1G004690 vs. NCBI nr
Match: KGN63922.1 (hypothetical protein Csa_1G027510 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 5.4e-62
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF 110
           SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF 109

[Close]

BLAST of CsGy1G004690 vs. NCBI nr
Match: XP_011649398.1 (PREDICTED: B3 domain-containing transcription repressor VAL1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 2.3e-57
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
           SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV+R
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVIR 101

[Close]

BLAST of CsGy1G004690 vs. NCBI nr
Match: XP_011649411.1 (PREDICTED: B3 domain-containing protein Os07g0679700-like isoform X4 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 2.3e-57
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
           SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV+R
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVIR 101

[Close]

BLAST of CsGy1G004690 vs. NCBI nr
Match: XP_008457292.1 (PREDICTED: B3 domain-containing transcription repressor VAL1-like isoform X3 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAP+S HWTKGWPLGSAGFANLC NCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPSSQHWTKGWPLGSAGFANLCHNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
           SFCGKRIHCGCIVSKSMFECLDYGGIGCT CVKRSRLGV+R
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTSCVKRSRLGVIR 101

[Close]

BLAST of CsGy1G004690 vs. NCBI nr
Match: XP_008457289.1 (PREDICTED: B3 domain-containing transcription repressor VAL2-like isoform X1 [Cucumis melo])

HSP 1 Score: 218.4 bits (555), Expect = 1.2e-53
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAP+S HWTKGWPLGSAGFANLC NCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPSSQHWTKGWPLGSAGFANLCHNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV 100
           SFCGKRIHCGCIVSKSMFECLDYGGIGCT CVKRSRLGV
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTSCVKRSRLGV 99

[Close]

BLAST of CsGy1G004690 vs. TAIR10
Match: AT2G30470.1 (high-level expression of sugar-inducible gene 2)

HSP 1 Score: 127.1 bits (318), Expect = 6.6e-30
Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 1  MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
          M S  CMN SC   +++ W KGWPL S   A+LC  CGSAYE+ +FC+ +H +++GWR+C
Sbjct: 6  MGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWREC 65

Query: 61 SFCGKRIHCGCIVSKSMFECLDYGGIGCTGC 92
            C KR+HCGCI SK   E +DYGG+GC+ C
Sbjct: 66 YLCSKRLHCGCIASKVTIELMDYGGVGCSTC 96

[Close]

BLAST of CsGy1G004690 vs. TAIR10
Match: AT4G32010.1 (HSI2-like 1)

HSP 1 Score: 118.2 bits (295), Expect = 3.1e-27
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 6  CMNTSC-PAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCG 65
          CMN  C  A TS  W KGWP+ S   A+LC  CG AYE  +FC+ +H++E+GWR+C+ C 
Sbjct: 7  CMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWRECNSCD 66

Query: 66 KRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRL 98
          KR+HCGCI S+ M E L+ GG+ C  C K+S L
Sbjct: 67 KRLHCGCIASRFMMELLENGGVTCISCAKKSGL 99

[Close]

BLAST of CsGy1G004690 vs. TAIR10
Match: AT4G21550.1 (VP1/ABI3-like 3)

HSP 1 Score: 98.2 bits (243), Expect = 3.3e-21
Identity = 42/94 (44.68%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           +++  C N  C      H   GW L S  F +LC  C SAYE   FCD +H   +GWR C
Sbjct: 12  LSARFCFNHECFEFKLDHCRPGWRLRSGDFVDLCDRCASAYEQGKFCDVFHQRASGWRCC 71

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKR 95
             CGKRIHCGCI S S +  +D GGI C  C ++
Sbjct: 72  ESCGKRIHCGCIASASAYTLMDAGGIECLACARK 105

[Close]

BLAST of CsGy1G004690 vs. Swiss-Prot
Match: sp|Q6Z3U3|Y7797_ORYSJ (B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0679700 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-33
Identity = 59/99 (59.60%), Postives = 71/99 (71.72%), Query Frame = 0


Query: 1   MASNRCMNTSC----PAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAG 60
           +A+ RCMN +C    P+P    W KGWPL S GFA LC  CG AYE LVFCD +H +E+G
Sbjct: 12  VAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLVFCDIFHQKESG 71

Query: 61  WRDCSFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRS 96
           WRDCSFCGKR+HCGCI SK+ F+ LD GG+ C  C+K S
Sbjct: 72  WRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNS 110

[Close]

BLAST of CsGy1G004690 vs. Swiss-Prot
Match: sp|Q8W4L5|VAL1_ARATH (B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana OX=3702 GN=VAL1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-28
Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 1  MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
          M S  CMN SC   +++ W KGWPL S   A+LC  CGSAYE+ +FC+ +H +++GWR+C
Sbjct: 6  MGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWREC 65

Query: 61 SFCGKRIHCGCIVSKSMFECLDYGGIGCTGC 92
            C KR+HCGCI SK   E +DYGG+GC+ C
Sbjct: 66 YLCSKRLHCGCIASKVTIELMDYGGVGCSTC 96

[Close]

BLAST of CsGy1G004690 vs. Swiss-Prot
Match: sp|Q5CCK4|VAL2_ARATH (B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana OX=3702 GN=VAL2 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.6e-26
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 6  CMNTSC-PAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCG 65
          CMN  C  A TS  W KGWP+ S   A+LC  CG AYE  +FC+ +H++E+GWR+C+ C 
Sbjct: 7  CMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWRECNSCD 66

Query: 66 KRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRL 98
          KR+HCGCI S+ M E L+ GG+ C  C K+S L
Sbjct: 67 KRLHCGCIASRFMMELLENGGVTCISCAKKSGL 99

[Close]

BLAST of CsGy1G004690 vs. Swiss-Prot
Match: sp|O65420|VAL3_ARATH (B3 domain-containing transcription factor VAL3 OS=Arabidopsis thaliana OX=3702 GN=VAL3 PE=4 SV=3)

HSP 1 Score: 98.2 bits (243), Expect = 5.9e-20
Identity = 42/94 (44.68%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           +++  C N  C      H   GW L S  F +LC  C SAYE   FCD +H   +GWR C
Sbjct: 12  LSARFCFNHECFEFKLDHCRPGWRLRSGDFVDLCDRCASAYEQGKFCDVFHQRASGWRCC 71

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKR 95
             CGKRIHCGCI S S +  +D GGI C  C ++
Sbjct: 72  ESCGKRIHCGCIASASAYTLMDAGGIECLACARK 105

[Close]

BLAST of CsGy1G004690 vs. Swiss-Prot
Match: sp|Q0D5G4|Y7633_ORYSJ (B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0563300 PE=3 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 3.9e-19
Identity = 43/91 (47.25%), Postives = 55/91 (60.44%), Query Frame = 0


Query: 6   CMNTSCPAPTS-LHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDCSFCG 65
           C N  C  P S     +GW L +  FA LC  C  ++E+  FC+T+H E AGWR+C  CG
Sbjct: 83  CFNAHCKDPKSDGPRRRGWRLRNGDFAELCDRCYHSFEHGGFCETFHLEVAGWRNCESCG 142

Query: 66  KRIHCGCIVSKSMFECLDYGGIGCTGCVKRS 96
           KR+HCGCIVS   F  LD GG+ C  C ++S
Sbjct: 143 KRLHCGCIVSVHAFVHLDAGGVECVMCARKS 173

[Close]

BLAST of CsGy1G004690 vs. TrEMBL
Match: tr|A0A0A0LT15|A0A0A0LT15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G027510 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.6e-62
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF 110
           SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVRLVSELANF 109

[Close]

BLAST of CsGy1G004690 vs. TrEMBL
Match: tr|A0A1S3C5U6|A0A1S3C5U6_CUCME (B3 domain-containing transcription repressor VAL1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497016 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.2e-55
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAP+S HWTKGWPLGSAGFANLC NCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPSSQHWTKGWPLGSAGFANLCHNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGVVR 102
           SFCGKRIHCGCIVSKSMFECLDYGGIGCT CVKRSRLGV+R
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTSCVKRSRLGVIR 101

[Close]

BLAST of CsGy1G004690 vs. TrEMBL
Match: tr|A0A1S3C591|A0A1S3C591_CUCME (B3 domain-containing protein Os07g0679700-like isoform X6 OS=Cucumis melo OX=3656 GN=LOC103497016 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.0e-54
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAP+S HWTKGWPLGSAGFANLC NCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPSSQHWTKGWPLGSAGFANLCHNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV 100
           SFCGKRIHCGCIVSKSMFECLDYGGIGCT CVKRSRLGV
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTSCVKRSRLGV 99

[Close]

BLAST of CsGy1G004690 vs. TrEMBL
Match: tr|A0A1S3C585|A0A1S3C585_CUCME (B3 domain-containing transcription repressor VAL1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497016 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.0e-54
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAP+S HWTKGWPLGSAGFANLC NCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPSSQHWTKGWPLGSAGFANLCHNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV 100
           SFCGKRIHCGCIVSKSMFECLDYGGIGCT CVKRSRLGV
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTSCVKRSRLGV 99

[Close]

BLAST of CsGy1G004690 vs. TrEMBL
Match: tr|A0A1S3C4R0|A0A1S3C4R0_CUCME (B3 domain-containing protein Os07g0679700-like isoform X5 OS=Cucumis melo OX=3656 GN=LOC103497016 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.0e-54
Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MASNRCMNTSCPAPTSLHWTKGWPLGSAGFANLCLNCGSAYENLVFCDTYHSEEAGWRDC 60
           MASNRCMNTSCPAP+S HWTKGWPLGSAGFANLC NCGSAYENLVFCDTYHSEEAGWRDC
Sbjct: 1   MASNRCMNTSCPAPSSQHWTKGWPLGSAGFANLCHNCGSAYENLVFCDTYHSEEAGWRDC 60

Query: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTGCVKRSRLGV 100
           SFCGKRIHCGCIVSKSMFECLDYGGIGCT CVKRSRLGV
Sbjct: 61  SFCGKRIHCGCIVSKSMFECLDYGGIGCTSCVKRSRLGV 99

The following BLAST results are available for this feature:

BLAST of CsGy1G004690 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63922.1	5.4e-62	100.00	hypothetical protein Csa_1G027510 [Cucumis sativus]	[more]
XP_011649398.1	2.3e-57	99.01	PREDICTED: B3 domain-containing transcription repressor VAL1-like isoform X1 [Cu...	[more]
XP_011649411.1	2.3e-57	99.01	PREDICTED: B3 domain-containing protein Os07g0679700-like isoform X4 [Cucumis sa...	[more]
XP_008457292.1	1.1e-54	95.05	PREDICTED: B3 domain-containing transcription repressor VAL1-like isoform X3 [Cu...	[more]
XP_008457289.1	1.2e-53	95.96	PREDICTED: B3 domain-containing transcription repressor VAL2-like isoform X1 [Cu...	[more]

BLAST of CsGy1G004690 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30470.1	6.6e-30	52.75	high-level expression of sugar-inducible gene 2	[more]
AT4G32010.1	3.1e-27	51.61	HSI2-like 1	[more]
AT4G21550.1	3.3e-21	44.68	VP1/ABI3-like 3	[more]

BLAST of CsGy1G004690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6Z3U3\|Y7797_ORYSJ	4.7e-33	59.60	B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q8W4L5\|VAL1_ARATH	1.2e-28	52.75	B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q5CCK4\|VAL2_ARATH	5.6e-26	51.61	B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana OX=370...	[more]
sp\|O65420\|VAL3_ARATH	5.9e-20	44.68	B3 domain-containing transcription factor VAL3 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q0D5G4\|Y7633_ORYSJ	3.9e-19	47.25	B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of CsGy1G004690 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT15\|A0A0A0LT15_CUCSA	3.6e-62	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G027510 PE=4 SV=1	[more]
tr\|A0A1S3C5U6\|A0A1S3C5U6_CUCME	7.2e-55	95.05	B3 domain-containing transcription repressor VAL1-like isoform X3 OS=Cucumis mel...	[more]
tr\|A0A1S3C591\|A0A1S3C591_CUCME	8.0e-54	95.96	B3 domain-containing protein Os07g0679700-like isoform X6 OS=Cucumis melo OX=365...	[more]
tr\|A0A1S3C585\|A0A1S3C585_CUCME	8.0e-54	95.96	B3 domain-containing transcription repressor VAL1-like isoform X2 OS=Cucumis mel...	[more]
tr\|A0A1S3C4R0\|A0A1S3C4R0_CUCME	8.0e-54	95.96	B3 domain-containing protein Os07g0679700-like isoform X5 OS=Cucumis melo OX=365...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G004690.1	CsGy1G004690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23336:SF28	B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1	coord: 1..101
None	No IPR available	PANTHER	PTHR23336	ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.	coord: 1..101

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G004690	Csa1G027510	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G004690	CSPI01G04810	Wild cucumber (PI 183967)	cgybcpiB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G004690	Cucurbita maxima (Rimu)	cgybcmaB105
CsGy1G004690	Cucurbita moschata (Rifu)	cgybcmoB099
CsGy1G004690	Cucurbita pepo (Zucchini)	cgybcpeB098
CsGy1G004690	Bottle gourd (USVL1VR-Ls)	cgyblsiB034
CsGy1G004690	Melon (DHL92) v3.5.1	cgybmeB030
CsGy1G004690	Melon (DHL92) v3.6.1	cgybmedB027
CsGy1G004690	Watermelon (Charleston Gray)	cgybwcgB049
CsGy1G004690	Watermelon (97103) v1	cgybwmB029
CsGy1G004690	Silver-seed gourd	carcgybB0526
CsGy1G004690	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G004690	Watermelon (97103) v2	cgybwmbB047
CsGy1G004690	Wax gourd	cgybwgoB059