Csa1G025920 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G025920
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	TB1-like TCP family transcription factor; contains IPR005333 (Transcription factor, TCP)
Location	Chr1 : 2936749 .. 2939005 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCAGAAAAGCTCAGAACGATCAGGTATTCCATACATAGTATATACATATACCATTGATTATTGTACTCACTGTTCATTTCAATTCTAGTATTCCAACCCAGAAGAGAAAAAATAAAACCACCATCAGGTAAAATTGAAATTACTTTTGAGATGTGGGTAATATATCTTATAATGAATAAACAATGTTCATGAGCAGAGAGAGAGGGTCTTAAATGCTAATGTCAGTCTGAGTATTAGAGCTTAAAAAGAGAGAGAGAGAGAGAGAGAGAGGCCAGATGGAAGGCATATTATTTTCAGAGATTTTGGTTTTGCTTTAAAAAGTAGTTTCAATTTATGAAGATAAAGGAAACTATTTAAAGGGTTAATCAAAATTCAAGGTATTTGGGGTTGTTTAAATGAGATTATTCAGTGTTTTTGAAATCTGGGTGTTTGATTTTTGAAGAAATAATTTATGGGTTTTTTGCAGAGAGGAGAAATGATTGAAGGGTAAGAGATAGAGAAGAAAAAAAAAAAAATTAAGAAAGGAGTACAGAAAAATTTAAGGTGGACTTTGCTTTTGGAAGAAAGGGGAAGAAGAAAAAGGGTTAAAGGATAGCTCTCTCTCTTTCCTGACTTGGAATGTGATATATCAATGGAGAGAAAAAGGGCTTTTTATCACTACACAGCCAAAGTACTCTGTGAGTTATCATCATCAATATGTATAGGACAGTAACCCCACCTGCACTCCATTCAACCTCCTCCTTCTTTTAAAGTTTAACTCAGAAGCCCCATTTTTTTTTTTTCTTTTTCTCTCTCTCTTAAGAGTAAAAAAAAGTATAATGGAATCCACTGTGTTGTAACCATAGGTCAAAAGAGGATGTTGTTTTTGTATAATTAGTCTTTGTTTCAGAAAGGAATGAAAGTGGTATGGAGGTGCTGGATATTCAAGAACAAGCCTGTAGGTTTCCACGAATTGGTAATGGTAGAAATGATTCCAACAAGTTAGGGCAAAAGGGTATTGTTCAATACACCCCAGATGATGAAGAAGACAAGGAATTTTCGAAAAGGGTCGCTGTTGTTACTTCTGCTACTGTTAATCCCACCGGACGATGTGAACCAGGTGGCATCGGTGGAGTTGGTGCTAATCGTCTTCATGGATGGCATCACTCGTCTCGTATTATTAGGGTTGCTCGAGCTTCTGGTGGTAAAGATCGGCACAGTAAAGTTTGGACATCGAAAGGGCTCAGAGATCGACGAGTTCGGCTTTCTGTCGCTACTGCGATTCAGTTCTACGATCTTCAAGATCGGCTTGGTTTCGAACAACCCAGCAAAGCTGTTGAGTGGCTGATCGAAGCAGCTTCCGACGCCATCGCTGAACTTCCGTCTCTGAGTGGCTCTTTCCCTGAAACTCCCAGGCAACTCAGTGACGAGAAAATGGGTAGCGATGGGGCCGACCAAGGGTTTGATTCCCCGGAAATGGAGCTCGACGGTGACCCAAAAAAACACCAACAGAATCCGAGACAGCAGCTTTCATTGGCGAGGTCTGCTTGTAGTAGTAACTCAGAGACGAGCAAGGGCTCGGGATTGTCTCTCTCCCGCTCTGAAATCCTAGTGAATCGAGCGAAGGCACGTGACAGAGCAAGAGAGAGAACTGCGAAAGAGAAGGAAAGAGAGCAAGAATCTCGCGATGCTCATTGCATTCCCAACAACCCATCTTTCACTGAGCTTCTCACCGGCGGTATCAACAATAACGGCGCCAATAACACCACCAATCGGACGAATTCAGCCTCGCAAAACAATGTAGTGGAGCCGAATTTGTTCGACAAGGCAACGGCCATGGATTACTTAGCCTCTTCTGGGATTATAGCCCAACAACCGTCGTCGTCTTCATCTTCACGGCCTGGCCATAATCAATCTGCGGGATTTTCAGGGCAAATCTTTTTGGGGAATCCACACCAATTGCCAGTGTCGATTCCACAATTTAACATCTCAGCCGCTGAAAATACTCAACAAGATCGGCTTCAACATTTCTCGTTCGTCCCAGATAATTTGAACGACTATAATCTTAACTTCACCATCTCTGCCGGCCTTGCTGGTTGCAATAGGGGGACCCTTCAGTCCAATATTTCACCGTCTTTTTTGCCTTACCTCCAGAGGTTTCCTCACTTAGAGGGATCAAACGTACCCTTTTTCATCGGAGCTGCATCGCCAACGACGGCGACGACTCCCGTACAGTTGGAAAATCACCATCAGTTGACACCAGCATTGTTTGA

mRNA sequence

ATGATTCAGAAAAGCTCAGAACGATCAGAAAGGAATGAAAGTGGTATGGAGGTGCTGGATATTCAAGAACAAGCCTGTAGGTTTCCACGAATTGGTAATGGTAGAAATGATTCCAACAAGTTAGGGCAAAAGGGTATTGTTCAATACACCCCAGATGATGAAGAAGACAAGGAATTTTCGAAAAGGGTCGCTGTTGTTACTTCTGCTACTGTTAATCCCACCGGACGATGTGAACCAGGTGGCATCGGTGGAGTTGGTGCTAATCGTCTTCATGGATGGCATCACTCGTCTCGTATTATTAGGGTTGCTCGAGCTTCTGGTGGTAAAGATCGGCACAGTAAAGTTTGGACATCGAAAGGGCTCAGAGATCGACGAGTTCGGCTTTCTGTCGCTACTGCGATTCAGTTCTACGATCTTCAAGATCGGCTTGGTTTCGAACAACCCAGCAAAGCTGTTGAGTGGCTGATCGAAGCAGCTTCCGACGCCATCGCTGAACTTCCGTCTCTGAGTGGCTCTTTCCCTGAAACTCCCAGGCAACTCAGTGACGAGAAAATGGGTAGCGATGGGGCCGACCAAGGGTTTGATTCCCCGGAAATGGAGCTCGACGGTGACCCAAAAAAACACCAACAGAATCCGAGACAGCAGCTTTCATTGGCGAGGTCTGCTTGTAGTAGTAACTCAGAGACGAGCAAGGGCTCGGGATTGTCTCTCTCCCGCTCTGAAATCCTAGTGAATCGAGCGAAGGCACGTGACAGAGCAAGAGAGAGAACTGCGAAAGAGAAGGAAAGAGAGCAAGAATCTCGCGATGCTCATTGCATTCCCAACAACCCATCTTTCACTGAGCTTCTCACCGGCGGTATCAACAATAACGGCGCCAATAACACCACCAATCGGACGAATTCAGCCTCGCAAAACAATGTAGTGGAGCCGAATTTGTTCGACAAGGCAACGGCCATGGATTACTTAGCCTCTTCTGGGATTATAGCCCAACAACCGTCGTCGTCTTCATCTTCACGGCCTGGCCATAATCAATCTGCGGGATTTTCAGGGCAAATCTTTTTGGGGAATCCACACCAATTGCCAGTGTCGATTCCACAATTTAACATCTCAGCCGCTGAAAATACTCAACAAGATCGGCTTCAACATTTCTCGTTCGTCCCAGATAATTTGAACGACTATAATCTTAACTTCACCATCTCTGCCGGCCTTGCTGAGGTTTCCTCACTTAGAGGGATCAAACGTACCCTTTTTCATCGGAGCTGCATCGCCAACGACGGCGACGACTCCCGTACAGTTGGAAAATCACCATCAGTTGACACCAGCATTGTTTGA

Coding sequence (CDS)

ATGATTCAGAAAAGCTCAGAACGATCAGAAAGGAATGAAAGTGGTATGGAGGTGCTGGATATTCAAGAACAAGCCTGTAGGTTTCCACGAATTGGTAATGGTAGAAATGATTCCAACAAGTTAGGGCAAAAGGGTATTGTTCAATACACCCCAGATGATGAAGAAGACAAGGAATTTTCGAAAAGGGTCGCTGTTGTTACTTCTGCTACTGTTAATCCCACCGGACGATGTGAACCAGGTGGCATCGGTGGAGTTGGTGCTAATCGTCTTCATGGATGGCATCACTCGTCTCGTATTATTAGGGTTGCTCGAGCTTCTGGTGGTAAAGATCGGCACAGTAAAGTTTGGACATCGAAAGGGCTCAGAGATCGACGAGTTCGGCTTTCTGTCGCTACTGCGATTCAGTTCTACGATCTTCAAGATCGGCTTGGTTTCGAACAACCCAGCAAAGCTGTTGAGTGGCTGATCGAAGCAGCTTCCGACGCCATCGCTGAACTTCCGTCTCTGAGTGGCTCTTTCCCTGAAACTCCCAGGCAACTCAGTGACGAGAAAATGGGTAGCGATGGGGCCGACCAAGGGTTTGATTCCCCGGAAATGGAGCTCGACGGTGACCCAAAAAAACACCAACAGAATCCGAGACAGCAGCTTTCATTGGCGAGGTCTGCTTGTAGTAGTAACTCAGAGACGAGCAAGGGCTCGGGATTGTCTCTCTCCCGCTCTGAAATCCTAGTGAATCGAGCGAAGGCACGTGACAGAGCAAGAGAGAGAACTGCGAAAGAGAAGGAAAGAGAGCAAGAATCTCGCGATGCTCATTGCATTCCCAACAACCCATCTTTCACTGAGCTTCTCACCGGCGGTATCAACAATAACGGCGCCAATAACACCACCAATCGGACGAATTCAGCCTCGCAAAACAATGTAGTGGAGCCGAATTTGTTCGACAAGGCAACGGCCATGGATTACTTAGCCTCTTCTGGGATTATAGCCCAACAACCGTCGTCGTCTTCATCTTCACGGCCTGGCCATAATCAATCTGCGGGATTTTCAGGGCAAATCTTTTTGGGGAATCCACACCAATTGCCAGTGTCGATTCCACAATTTAACATCTCAGCCGCTGAAAATACTCAACAAGATCGGCTTCAACATTTCTCGTTCGTCCCAGATAATTTGAACGACTATAATCTTAACTTCACCATCTCTGCCGGCCTTGCTGAGGTTTCCTCACTTAGAGGGATCAAACGTACCCTTTTTCATCGGAGCTGCATCGCCAACGACGGCGACGACTCCCGTACAGTTGGAAAATCACCATCAGTTGACACCAGCATTGTTTGA

Protein sequence

MIQKSSERSERNESGMEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAEVSSLRGIKRTLFHRSCIANDGDDSRTVGKSPSVDTSIV*

Homology

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BLAST of Csa1G025920 vs. Swiss-Prot
Match: TCP2_ARATH (Transcription factor TCP2 OS=Arabidopsis thaliana GN=TCP2 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.1e-47
Identity = 150/353 (42.49%), Postives = 191/353 (54.11%), Query Frame = 1


Query: 88  NRLHGWHH-SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFE 147
           NRL  WHH SSRIIRV+RASGGKDRHSKV TSKG RDRRVRLSV+TA+QFYDLQDRLG++
Sbjct: 21  NRLSRWHHNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYD 80

Query: 148 QPSKAVEWLIEAASDAIAELPSLSGS-FPETPRQLSDEKMGSDGADQGFDSPEMELDGDP 207
           QPSKAVEWLI+AA D+I+ELPSL+ + FP       ++ + +  A+              
Sbjct: 81  QPSKAVEWLIKAAEDSISELPSLNNTHFPTDDENHQNQTLTTVAAN-------------- 140

Query: 208 KKHQQNPRQQLSLARSACSSNSETSK-GSGLSLSRSEILVNRAKARDRARERTAKE-KER 267
                      SL++SACSSNS+TSK  SGLSLSRSE+   R KAR+RARERTAKE KER
Sbjct: 141 -----------SLSKSACSSNSDTSKNSSGLSLSRSEL---RDKARERARERTAKETKER 200

Query: 268 EQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDKATAMDYLA 327
           +          N+ SFT+LL  G         ++  NS  Q     P+    ++ M+Y +
Sbjct: 201 DH---------NHTSFTDLLNSG---------SDPVNSNRQWMASAPS----SSPMEYFS 260

Query: 328 SSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENTQQDRLQHF 387
           S  I+    S   +  P    S  FS      + H  P                 + Q F
Sbjct: 261 SGLILG---SGQQTHFPISTNSHPFSS--ISDHHHHHP---------------HHQHQEF 303

Query: 388 SFVPDNL--------NDYNLNF---TISAGLAEVSSLRGIKRTLFHRSCIAND 426
           SFVPD+L          +NL+F   T S   A VS+  G   + F+R  + ++
Sbjct: 321 SFVPDHLISPAESNGGAFNLDFNMSTPSGAGAAVSAASGGGFSGFNRGTLQSN 303

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BLAST of Csa1G025920 vs. Swiss-Prot
Match: TCP24_ARATH (Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-40
Identity = 141/323 (43.65%), Postives = 175/323 (54.18%), Query Frame = 1


Query: 90  LHGWHH-SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQP 149
           +  W++ SSRIIRV+RASGGKDRHSKV TSKGLRDRR+RLSVATAIQFYDLQDRLGF+QP
Sbjct: 31  MRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 90

Query: 150 SKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFDSPEMELDGDPKKH 209
           SKAVEWLI AASD+I +LP                       +  FD     LD      
Sbjct: 91  SKAVEWLINAASDSITDLP---------------------LLNTNFD----HLD------ 150

Query: 210 QQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARERTAKEKEREQESR 269
            QN  Q     +SACSS   TS+ S LSLSR+EI   R KAR+RARERTA  K+R+++ +
Sbjct: 151 -QNQNQ----TKSACSSG--TSESSLLSLSRTEI---RGKARERARERTA--KDRDKDLQ 210

Query: 270 DAHCIPNNPSFTELLTGGINNNGAN-NTTNRT-----------NSASQNNVVEPNLFDKA 329
           +AH      SFT+LLTGG +   +N N T  +           NS+SQ    EP     +
Sbjct: 211 NAH-----SSFTQLLTGGFDQQPSNRNWTGGSDCFNPVQLQIPNSSSQ----EPMNHPFS 270

Query: 330 TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGF----SGQIFLGNPHQLPV-SIPQFNISA 389
              DY  + GI     SSSSS+  G   S G     S  +FL N + +   S    + S+
Sbjct: 271 FVPDY--NFGI-----SSSSSAINGGYSSRGTLQSNSQSLFLNNNNNITQRSSISSSSSS 294

Query: 390 AENTQQDRLQHFSFVPDNLNDYN 395
           +       +  F   P  L+ +N
Sbjct: 331 SSPMDSQSISFFMATPPPLDHHN 294

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BLAST of Csa1G025920 vs. Swiss-Prot
Match: PCF6_ORYSJ (Transcription factor PCF6 OS=Oryza sativa subsp. japonica GN=PCF6 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-32
Identity = 123/332 (37.05%), Postives = 152/332 (45.78%), Query Frame = 1


Query: 75  GRCEPGGIGGVGANRLHGWHHS--SRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVAT 134
           G+   GG GG     + G   S  SRI RV RA+GGKDRHSKV+T+KG+RDRRVRLSVAT
Sbjct: 18  GKRGRGGGGGEMVEAVWGQTGSTASRIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVAT 77

Query: 135 AIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLS-GSFPETPRQLSDEKMGSDGAD 194
           AIQFYDLQDRLGF+QPSKA+EWLI AAS AI  LPSL   +F   P   +D         
Sbjct: 78  AIQFYDLQDRLGFDQPSKAIEWLINAASPAIDTLPSLDPAAFAAIPHAAADA-------- 137

Query: 195 QGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARD 254
                         ++  Q  +QQLS  +S CSS SETSKGS       E+ V  A A+ 
Sbjct: 138 -----------APTRRRSQQQQQQLS-NKSGCSSTSETSKGSD-----KEVTVASAPAQ- 197

Query: 255 RARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPN 314
                                     SFTELL  G+  + A       N A    +  P 
Sbjct: 198 ------------------------AASFTELLIAGVAASSAGGGA-IGNGADCVGIAHPG 257

Query: 315 LFDKATAMDY-LASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNIS 374
                 A  Y  +++      P       P  N SA                  P  +++
Sbjct: 258 KGGAEGASTYGFSAASSFGDAPPIGMVPAPPFNFSA------------------PGADMA 277

Query: 375 AAENTQQDRLQHFSFVPDNLNDYNLNFTISAG 403
           A  +  QD+L   +  P    DYNLNF++S+G
Sbjct: 318 AHYSLAQDQLA--APPPPAGGDYNLNFSMSSG 277

[Close]

BLAST of Csa1G025920 vs. Swiss-Prot
Match: PCF6_ORYSI (Transcription factor PCF6 OS=Oryza sativa subsp. indica GN=PCF6 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.2e-32
Identity = 121/332 (36.45%), Postives = 150/332 (45.18%), Query Frame = 1


Query: 75  GRCEPGGIGGVGANRLHGWHHS--SRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVAT 134
           G+   GG GG     + G   S  SRI RV RA+GGKDRHSKV+T+KG+RDRRVRLSVAT
Sbjct: 18  GKRGRGGGGGEMVEAVWGQTGSTASRIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVAT 77

Query: 135 AIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLS-GSFPETPRQLSDEKMGSDGAD 194
           AIQFYDLQDRLGF+QPSKA+EWLI AAS AI  LPSL   +F   P   +          
Sbjct: 78  AIQFYDLQDRLGFDQPSKAIEWLINAASPAIDTLPSLDPAAFAAIPHAAA---------- 137

Query: 195 QGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARD 254
                     D  P + +   +QQ    +S CSS SETSKGS       E+ V  A A+ 
Sbjct: 138 ---------ADAAPTRRRSQQQQQQLSNKSGCSSTSETSKGSD-----KEVTVASAPAQ- 197

Query: 255 RARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPN 314
                                     SFTELL  G+  + A       N A    +  P 
Sbjct: 198 ------------------------AASFTELLIAGVAASSAGGGA-IGNGADCVGIAHPG 257

Query: 315 LFDKATAMDY-LASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNIS 374
                 A  Y  +++      P       P  N SA                  P  +++
Sbjct: 258 KGGAEGASTYGFSAASSFGDAPPIGMVPAPPFNFSA------------------PGADMA 278

Query: 375 AAENTQQDRLQHFSFVPDNLNDYNLNFTISAG 403
           A  +  QD+L   +  P    DYNLNF++S+G
Sbjct: 318 AHYSLAQDQLA--APPPPAGGDYNLNFSMSSG 278

[Close]

BLAST of Csa1G025920 vs. Swiss-Prot
Match: PCF8_ORYSJ (Transcription factor PCF8 OS=Oryza sativa subsp. japonica GN=PCF8 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.5e-24
Identity = 68/120 (56.67%), Postives = 74/120 (61.67%), Query Frame = 1


Query: 73  PTGRCEPGGIGGVGANRLHGWHHSSRIIRVARAS-GGKDRHSKVWTSKGLRDRRVRLSVA 132
           P G     G GG  A     W  S    RVARA+ GGKDRHSKV TS+GLRDRRVRLSV 
Sbjct: 14  PRGALVGVGGGGASAATAAAWRTS----RVARAAAGGKDRHSKVVTSRGLRDRRVRLSVP 73

Query: 133 TAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGAD 192
           TAI FYD+QDRLG +QPSKA+EWLI AA+ AI  LPSL  SF       S     +D A+
Sbjct: 74  TAIAFYDIQDRLGVDQPSKAIEWLIRAAAAAIDALPSLDCSFALPAAASSPPPPAADDAE 129

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BLAST of Csa1G025920 vs. TrEMBL
Match: A0A0A0LV70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025920 PE=4 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 2.2e-253
Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 1


Query: 1   MIQKSSERSERNESGMEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFS 60
           MIQKSSERSERNESGMEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFS
Sbjct: 1   MIQKSSERSERNESGMEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFS 60

Query: 61  KRVAVVTSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKG 120
           KRVAVVTSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKG
Sbjct: 61  KRVAVVTSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKG 120

Query: 121 LRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQL 180
           LRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQL
Sbjct: 121 LRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQL 180

Query: 181 SDEKMGSDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRS 240
           SDEKMGSDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRS
Sbjct: 181 SDEKMGSDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRS 240

Query: 241 EILVNRAKARDRARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTN 300
           EILVNRAKARDRARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTN
Sbjct: 241 EILVNRAKARDRARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTN 300

Query: 301 SASQNNVVEPNLFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQL 360
           SASQNNVVEPNLFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQL
Sbjct: 301 SASQNNVVEPNLFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQL 360

Query: 361 PVSIPQFNISAAENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAEVSSLRGIKRTLFHRS 420
           PVSIPQFNISAAENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAEVSSLRGIKRTLFHRS
Sbjct: 361 PVSIPQFNISAAENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAEVSSLRGIKRTLFHRS 420

Query: 421 CIANDGDDSRTVGKSPSVDTSIV 444
           CIANDGDDSRTVGKSPSVDTSIV
Sbjct: 421 CIANDGDDSRTVGKSPSVDTSIV 443

[Close]

BLAST of Csa1G025920 vs. TrEMBL
Match: A0A061GKS6_THECC (Teosinte branched 1, putative isoform 4 (Fragment) OS=Theobroma cacao GN=TCM_029442 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 4.9e-120
Identity = 262/415 (63.13%), Postives = 296/415 (71.33%), Query Frame = 1


Query: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75
           MEV +IQ QAC+F R+GNGRNDS+K+GQK    Y PDDEED E +KR      A  N  G
Sbjct: 1   MEVEEIQTQACKFSRVGNGRNDSSKIGQKVSDNY-PDDEEDGELNKR------AGANGGG 60

Query: 76  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 135
               GG    G NRL GWHHSSRIIRV+RASGGKDRHSKVWTSKGLRDRRVRLSV TAIQ
Sbjct: 61  GGGGGGADTAGTNRLRGWHHSSRIIRVSRASGGKDRHSKVWTSKGLRDRRVRLSVTTAIQ 120

Query: 136 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 195
           FYDLQDRLG++QPSKAVEWLI+AASDAIAELPSL+ SFP+TP+QLSDEK  S G +QGFD
Sbjct: 121 FYDLQDRLGYDQPSKAVEWLIKAASDAIAELPSLNSSFPDTPKQLSDEKRASGGNEQGFD 180

Query: 196 SPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE 255
           S E+ELDGDP  +QQN  Q LSL++SACSS SETS+ SGLSLSRSEI   R KAR+RARE
Sbjct: 181 SAEVELDGDPNNYQQNQSQHLSLSKSACSSTSETSRNSGLSLSRSEI---RVKARERARE 240

Query: 256 RTAKEKEREQESRDAH-----CIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEP 315
           R AKEKE+EQESR AH      I  N SFTELLTGGI + G NN  + T SA QN   EP
Sbjct: 241 RAAKEKEKEQESRIAHHQNVNPISQNSSFTELLTGGIGSVG-NNNASPTASAHQNPNGEP 300

Query: 316 NLFDKA--------TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPV 375
           + F KA        T MDY  +SG++A  PSSSS S    + S+GF GQI LGN     +
Sbjct: 301 DFFHKANTARQWPGTPMDYF-TSGLLA--PSSSSRS----HHSSGFPGQIQLGNSLPQSI 360

Query: 376 SIPQFNISAAENTQQDRLQHFSFV--PDNL-----------NDYNLNFTISAGLA 405
           SI  FN+S  EN Q+  LQHFSFV  PD+L            DYNLNFTIS+GLA
Sbjct: 361 SISPFNVS-GENHQE--LQHFSFVPNPDHLIPVATTQPGPGGDYNLNFTISSGLA 394

[Close]

BLAST of Csa1G025920 vs. TrEMBL
Match: A0A061GDP3_THECC (Teosinte branched 1, putative isoform 1 OS=Theobroma cacao GN=TCM_029442 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 4.9e-120
Identity = 262/415 (63.13%), Postives = 296/415 (71.33%), Query Frame = 1


Query: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75
           MEV +IQ QAC+F R+GNGRNDS+K+GQK    Y PDDEED E +KR      A  N  G
Sbjct: 1   MEVEEIQTQACKFSRVGNGRNDSSKIGQKVSDNY-PDDEEDGELNKR------AGANGGG 60

Query: 76  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 135
               GG    G NRL GWHHSSRIIRV+RASGGKDRHSKVWTSKGLRDRRVRLSV TAIQ
Sbjct: 61  GGGGGGADTAGTNRLRGWHHSSRIIRVSRASGGKDRHSKVWTSKGLRDRRVRLSVTTAIQ 120

Query: 136 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 195
           FYDLQDRLG++QPSKAVEWLI+AASDAIAELPSL+ SFP+TP+QLSDEK  S G +QGFD
Sbjct: 121 FYDLQDRLGYDQPSKAVEWLIKAASDAIAELPSLNSSFPDTPKQLSDEKRASGGNEQGFD 180

Query: 196 SPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE 255
           S E+ELDGDP  +QQN  Q LSL++SACSS SETS+ SGLSLSRSEI   R KAR+RARE
Sbjct: 181 SAEVELDGDPNNYQQNQSQHLSLSKSACSSTSETSRNSGLSLSRSEI---RVKARERARE 240

Query: 256 RTAKEKEREQESRDAH-----CIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEP 315
           R AKEKE+EQESR AH      I  N SFTELLTGGI + G NN  + T SA QN   EP
Sbjct: 241 RAAKEKEKEQESRIAHHQNVNPISQNSSFTELLTGGIGSVG-NNNASPTASAHQNPNGEP 300

Query: 316 NLFDKA--------TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPV 375
           + F KA        T MDY  +SG++A  PSSSS S    + S+GF GQI LGN     +
Sbjct: 301 DFFHKANTARQWPGTPMDYF-TSGLLA--PSSSSRS----HHSSGFPGQIQLGNSLPQSI 360

Query: 376 SIPQFNISAAENTQQDRLQHFSFV--PDNL-----------NDYNLNFTISAGLA 405
           SI  FN+S  EN Q+  LQHFSFV  PD+L            DYNLNFTIS+GLA
Sbjct: 361 SISPFNVS-GENHQE--LQHFSFVPNPDHLIPVATTQPGPGGDYNLNFTISSGLA 394

[Close]

BLAST of Csa1G025920 vs. TrEMBL
Match: A0A0D2UNY1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G046000 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 3.6e-107
Identity = 239/415 (57.59%), Postives = 282/415 (67.95%), Query Frame = 1


Query: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75
           MEV +IQ Q C+F  +GNGRN+++K+GQKG     PDDEED E  KR A    A      
Sbjct: 1   MEVDEIQTQTCKFSTVGNGRNETSKIGQKGSDSNFPDDEEDGELIKRAAATAVAN----- 60

Query: 76  RCEPGGIGG-VGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAI 135
               GG+   +G N L GWH+SSRIIRV+RASGGKDRHSKVWTSKGLRDRRVRLSV TAI
Sbjct: 61  ----GGVADTIGTNSLRGWHNSSRIIRVSRASGGKDRHSKVWTSKGLRDRRVRLSVTTAI 120

Query: 136 QFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGF 195
           QFYDLQDRLG++QPSKAVEWLI+AASDAIAELPSL+ SFP+TP+QLSDEK GS G +QGF
Sbjct: 121 QFYDLQDRLGYDQPSKAVEWLIKAASDAIAELPSLNTSFPDTPKQLSDEKRGSGGIEQGF 180

Query: 196 DSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRAR 255
           DS E+ELDGDP  +QQ+    LSL++SA SS SET K S LSLSRS   VNR KAR+RAR
Sbjct: 181 DSAEVELDGDPSNYQQH----LSLSKSASSSTSETRKNSSLSLSRSGTRVNRVKARERAR 240

Query: 256 ERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTT---NRTNSASQNNVVEPN 315
           ERTAKEKE  Q+ ++   I  N SFTELLT GI N   NNT+   + + SA Q+   E +
Sbjct: 241 ERTAKEKEGHQQ-QNVSPISQNSSFTELLTSGIGNVSNNNTSPSASASASAHQDPSAESD 300

Query: 316 LFDKA---------TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPV 375
            + KA         T MDY A SG++   PSSS     GH+ S    GQI L N  Q P+
Sbjct: 301 FYQKANSTARLWPVTPMDYFA-SGLLG--PSSSR----GHHSSGFPGGQIHLVNSLQQPM 360

Query: 376 SIPQFNISAAENTQQDRLQHFSFV--PDNL-----------NDYNLNFTISAGLA 405
           + P F +S  EN Q+  +QHFSFV  PD+L            DYNLNFTIS+GLA
Sbjct: 361 TTPPFTVS-GENHQE--MQHFSFVPNPDHLIPVATTQPGQGVDYNLNFTISSGLA 391

[Close]

BLAST of Csa1G025920 vs. TrEMBL
Match: B9S0X3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0631030 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.7e-107
Identity = 243/432 (56.25%), Postives = 289/432 (66.90%), Query Frame = 1


Query: 16  MEVLDIQEQA-CRFPRIG-NGRNDSNKLGQKGIV-------QYTPDDEEDKEFSKRVAVV 75
           MEV +IQ Q  C+FPR+G NGR+D+ K+GQKG         QY PD+EED E  KR  + 
Sbjct: 1   MEVEEIQTQPPCKFPRVGSNGRSDTTKIGQKGSNNTGTDHNQY-PDEEEDGELIKRPNLG 60

Query: 76  TSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRV 135
           T A          GG  G   NRL  WHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRV
Sbjct: 61  TGA----------GGDAGSANNRLREWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRV 120

Query: 136 RLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMG 195
           RLSV TAIQFYDLQDRLG++QPSKAVEWLI+AA+D+I ELPSL+GSFP+TP+QLSDEK  
Sbjct: 121 RLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADSINELPSLNGSFPDTPKQLSDEKRT 180

Query: 196 SDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNR 255
           SDG +Q FDS ++EL+ DP    QN  Q LSL++SACSS S+TSKGSGLSL RS+I VNR
Sbjct: 181 SDGTEQAFDSADVELE-DP-NFNQNQNQHLSLSKSACSSTSDTSKGSGLSLLRSDIRVNR 240

Query: 256 AKARDRARERTAKEKEREQESRDA-------HCIPNNPSFTELLTGGINNNGANNTTNRT 315
            KAR+RARER AKEKE+E ESR+A         I  N +FTELLTGGI++   +N  N  
Sbjct: 241 VKARERARERAAKEKEKENESRNAAHQQNMNQPISQNSTFTELLTGGISSVSNSNNNNAA 300

Query: 316 NSASQNNVVEPNLF-DKATA-----------MDYLASSGIIAQQPSSSSSSRPGHNQSAG 375
            +A+  +  E NLF  KA A           MDY   +G++       SSSR  H QS+G
Sbjct: 301 AAATSPSGSEVNLFHHKAAAAATARQWPLIPMDYFGGTGLL-----GPSSSRTAH-QSSG 360

Query: 376 FSGQIFLGN--PHQLPVSIPQFNISA-AENTQQDRLQHFSFVPDNL------------ND 405
           F GQI LGN     + +SIP FN S  + + +Q +LQHF FV D+L             D
Sbjct: 361 FPGQIQLGNSISQAMTMSIPPFNFSGESHHQEQQQLQHFPFVSDHLIPVATTQSSCPGGD 413

[Close]

BLAST of Csa1G025920 vs. TAIR10
Match: AT4G18390.1 (AT4G18390.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-48
Identity = 150/353 (42.49%), Postives = 191/353 (54.11%), Query Frame = 1


Query: 88  NRLHGWHH-SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFE 147
           NRL  WHH SSRIIRV+RASGGKDRHSKV TSKG RDRRVRLSV+TA+QFYDLQDRLG++
Sbjct: 21  NRLSRWHHNSSRIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYD 80

Query: 148 QPSKAVEWLIEAASDAIAELPSLSGS-FPETPRQLSDEKMGSDGADQGFDSPEMELDGDP 207
           QPSKAVEWLI+AA D+I+ELPSL+ + FP       ++ + +  A+              
Sbjct: 81  QPSKAVEWLIKAAEDSISELPSLNNTHFPTDDENHQNQTLTTVAAN-------------- 140

Query: 208 KKHQQNPRQQLSLARSACSSNSETSK-GSGLSLSRSEILVNRAKARDRARERTAKE-KER 267
                      SL++SACSSNS+TSK  SGLSLSRSE+   R KAR+RARERTAKE KER
Sbjct: 141 -----------SLSKSACSSNSDTSKNSSGLSLSRSEL---RDKARERARERTAKETKER 200

Query: 268 EQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDKATAMDYLA 327
           +          N+ SFT+LL  G         ++  NS  Q     P+    ++ M+Y +
Sbjct: 201 DH---------NHTSFTDLLNSG---------SDPVNSNRQWMASAPS----SSPMEYFS 260

Query: 328 SSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENTQQDRLQHF 387
           S  I+    S   +  P    S  FS      + H  P                 + Q F
Sbjct: 261 SGLILG---SGQQTHFPISTNSHPFSS--ISDHHHHHP---------------HHQHQEF 303

Query: 388 SFVPDNL--------NDYNLNF---TISAGLAEVSSLRGIKRTLFHRSCIAND 426
           SFVPD+L          +NL+F   T S   A VS+  G   + F+R  + ++
Sbjct: 321 SFVPDHLISPAESNGGAFNLDFNMSTPSGAGAAVSAASGGGFSGFNRGTLQSN 303

[Close]

BLAST of Csa1G025920 vs. TAIR10
Match: AT1G30210.1 (AT1G30210.1 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24)

HSP 1 Score: 168.7 bits (426), Expect = 8.1e-42
Identity = 141/323 (43.65%), Postives = 175/323 (54.18%), Query Frame = 1


Query: 90  LHGWHH-SSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQP 149
           +  W++ SSRIIRV+RASGGKDRHSKV TSKGLRDRR+RLSVATAIQFYDLQDRLGF+QP
Sbjct: 31  MRNWNNPSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 90

Query: 150 SKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFDSPEMELDGDPKKH 209
           SKAVEWLI AASD+I +LP                       +  FD     LD      
Sbjct: 91  SKAVEWLINAASDSITDLP---------------------LLNTNFD----HLD------ 150

Query: 210 QQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARERTAKEKEREQESR 269
            QN  Q     +SACSS   TS+ S LSLSR+EI   R KAR+RARERTA  K+R+++ +
Sbjct: 151 -QNQNQ----TKSACSSG--TSESSLLSLSRTEI---RGKARERARERTA--KDRDKDLQ 210

Query: 270 DAHCIPNNPSFTELLTGGINNNGAN-NTTNRT-----------NSASQNNVVEPNLFDKA 329
           +AH      SFT+LLTGG +   +N N T  +           NS+SQ    EP     +
Sbjct: 211 NAH-----SSFTQLLTGGFDQQPSNRNWTGGSDCFNPVQLQIPNSSSQ----EPMNHPFS 270

Query: 330 TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGF----SGQIFLGNPHQLPV-SIPQFNISA 389
              DY  + GI     SSSSS+  G   S G     S  +FL N + +   S    + S+
Sbjct: 271 FVPDY--NFGI-----SSSSSAINGGYSSRGTLQSNSQSLFLNNNNNITQRSSISSSSSS 294

Query: 390 AENTQQDRLQHFSFVPDNLNDYN 395
           +       +  F   P  L+ +N
Sbjct: 331 SSPMDSQSISFFMATPPPLDHHN 294

[Close]

BLAST of Csa1G025920 vs. TAIR10
Match: AT3G02150.2 (AT3G02150.2 plastid transcription factor 1)

HSP 1 Score: 109.0 bits (271), Expect = 7.6e-24
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 98  RIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIE 157
           RI+RV+RA GGKDRHSKV T +GLRDRRVRLSV TAIQ YDLQ+RLG +QPSKAV+WL++
Sbjct: 64  RIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLD 123

Query: 158 AASDAIAELPSLSGSFPETPRQLS 182
           AA + I ELP L    P +P   S
Sbjct: 124 AAKEEIDELPPL----PISPENFS 143

[Close]

BLAST of Csa1G025920 vs. TAIR10
Match: AT5G60970.1 (AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 106.7 bits (265), Expect = 3.8e-23
Identity = 53/83 (63.86%), Postives = 61/83 (73.49%), Query Frame = 1


Query: 98  RIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIE 157
           RI+RV+R  GGKDRHSKV T +GLRDRR+RLSV TAIQ YDLQDRLG  QPSK ++WL+E
Sbjct: 53  RIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLE 112

Query: 158 AASDAIAELPSLSGSFPETPRQL 181
           AA D + +LP L   FP    Q+
Sbjct: 113 AAKDDVDKLPPL--QFPHGFNQM 133

[Close]

BLAST of Csa1G025920 vs. TAIR10
Match: AT5G08070.1 (AT5G08070.1 TCP domain protein 17)

HSP 1 Score: 103.2 bits (256), Expect = 4.2e-22
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1


Query: 95  HSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEW 154
           ++ RI+RV+RA GGKDRHSKV T +GLRDRR+RLSV TAIQ YDLQ+RLG  QPSK ++W
Sbjct: 20  NNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVIDW 79

Query: 155 LIEAASDAIAELPSLSGSFPETPRQLSDEKMG 187
           L+E A + +  LP L   FP    QL+    G
Sbjct: 80  LLEVAKNDVDLLPPL--QFPPGFHQLNPNLTG 109

[Close]

BLAST of Csa1G025920 vs. NCBI nr
Match: gi|700208815|gb|KGN63911.1| (hypothetical protein Csa_1G025920 [Cucumis sativus])

HSP 1 Score: 882.5 bits (2279), Expect = 3.1e-253
Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 1


Query: 1   MIQKSSERSERNESGMEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFS 60
           MIQKSSERSERNESGMEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFS
Sbjct: 1   MIQKSSERSERNESGMEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFS 60

Query: 61  KRVAVVTSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKG 120
           KRVAVVTSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKG
Sbjct: 61  KRVAVVTSATVNPTGRCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKG 120

Query: 121 LRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQL 180
           LRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQL
Sbjct: 121 LRDRRVRLSVATAIQFYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQL 180

Query: 181 SDEKMGSDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRS 240
           SDEKMGSDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRS
Sbjct: 181 SDEKMGSDGADQGFDSPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRS 240

Query: 241 EILVNRAKARDRARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTN 300
           EILVNRAKARDRARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTN
Sbjct: 241 EILVNRAKARDRARERTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTN 300

Query: 301 SASQNNVVEPNLFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQL 360
           SASQNNVVEPNLFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQL
Sbjct: 301 SASQNNVVEPNLFDKATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQL 360

Query: 361 PVSIPQFNISAAENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAEVSSLRGIKRTLFHRS 420
           PVSIPQFNISAAENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAEVSSLRGIKRTLFHRS
Sbjct: 361 PVSIPQFNISAAENTQQDRLQHFSFVPDNLNDYNLNFTISAGLAEVSSLRGIKRTLFHRS 420

Query: 421 CIANDGDDSRTVGKSPSVDTSIV 444
           CIANDGDDSRTVGKSPSVDTSIV
Sbjct: 421 CIANDGDDSRTVGKSPSVDTSIV 443

[Close]

BLAST of Csa1G025920 vs. NCBI nr
Match: gi|778656591|ref|XP_011649359.1| (PREDICTED: transcription factor TCP2 [Cucumis sativus])

HSP 1 Score: 779.2 bits (2011), Expect = 3.7e-222
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 1


Query: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75
           MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG
Sbjct: 1   MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 60

Query: 76  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 135
           RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ
Sbjct: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120

Query: 136 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 195
           FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD
Sbjct: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180

Query: 196 SPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE 255
           SPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE
Sbjct: 181 SPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE 240

Query: 256 RTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDK 315
           RTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDK
Sbjct: 241 RTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDK 300

Query: 316 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 375
           ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT
Sbjct: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360

Query: 376 QQDRLQHFSFVPDNLNDYNLNFTISAGLA 405
           QQDRLQHFSFVPDNLNDYNLNFTISAGLA
Sbjct: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLA 389

[Close]

BLAST of Csa1G025920 vs. NCBI nr
Match: gi|659068459|ref|XP_008444530.1| (PREDICTED: transcription factor TCP2-like [Cucumis melo])

HSP 1 Score: 775.0 bits (2000), Expect = 7.0e-221
Identity = 386/389 (99.23%), Postives = 388/389 (99.74%), Query Frame = 1


Query: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75
           MEV+DIQEQACRFPRIGNGRNDSNKLGQKGIVQY+PDDEEDKEFSKRVAVVTSATVNPTG
Sbjct: 1   MEVVDIQEQACRFPRIGNGRNDSNKLGQKGIVQYSPDDEEDKEFSKRVAVVTSATVNPTG 60

Query: 76  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 135
           RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ
Sbjct: 61  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 120

Query: 136 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 195
           FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD
Sbjct: 121 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 180

Query: 196 SPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE 255
           SPEMELDGDPKKHQQNPRQQLSL RSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE
Sbjct: 181 SPEMELDGDPKKHQQNPRQQLSLTRSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE 240

Query: 256 RTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDK 315
           RTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDK
Sbjct: 241 RTAKEKEREQESRDAHCIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEPNLFDK 300

Query: 316 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 375
           ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT
Sbjct: 301 ATAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPVSIPQFNISAAENT 360

Query: 376 QQDRLQHFSFVPDNLNDYNLNFTISAGLA 405
           QQDRLQHFSFVPDNLNDYNLNFTISAGLA
Sbjct: 361 QQDRLQHFSFVPDNLNDYNLNFTISAGLA 389

[Close]

BLAST of Csa1G025920 vs. NCBI nr
Match: gi|590622360|ref|XP_007025029.1| (Teosinte branched 1, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 439.5 bits (1129), Expect = 7.0e-120
Identity = 262/415 (63.13%), Postives = 296/415 (71.33%), Query Frame = 1


Query: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75
           MEV +IQ QAC+F R+GNGRNDS+K+GQK    Y PDDEED E +KR      A  N  G
Sbjct: 1   MEVEEIQTQACKFSRVGNGRNDSSKIGQKVSDNY-PDDEEDGELNKR------AGANGGG 60

Query: 76  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 135
               GG    G NRL GWHHSSRIIRV+RASGGKDRHSKVWTSKGLRDRRVRLSV TAIQ
Sbjct: 61  GGGGGGADTAGTNRLRGWHHSSRIIRVSRASGGKDRHSKVWTSKGLRDRRVRLSVTTAIQ 120

Query: 136 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 195
           FYDLQDRLG++QPSKAVEWLI+AASDAIAELPSL+ SFP+TP+QLSDEK  S G +QGFD
Sbjct: 121 FYDLQDRLGYDQPSKAVEWLIKAASDAIAELPSLNSSFPDTPKQLSDEKRASGGNEQGFD 180

Query: 196 SPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE 255
           S E+ELDGDP  +QQN  Q LSL++SACSS SETS+ SGLSLSRSEI   R KAR+RARE
Sbjct: 181 SAEVELDGDPNNYQQNQSQHLSLSKSACSSTSETSRNSGLSLSRSEI---RVKARERARE 240

Query: 256 RTAKEKEREQESRDAH-----CIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEP 315
           R AKEKE+EQESR AH      I  N SFTELLTGGI + G NN  + T SA QN   EP
Sbjct: 241 RAAKEKEKEQESRIAHHQNVNPISQNSSFTELLTGGIGSVG-NNNASPTASAHQNPNGEP 300

Query: 316 NLFDKA--------TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPV 375
           + F KA        T MDY  +SG++A  PSSSS S    + S+GF GQI LGN     +
Sbjct: 301 DFFHKANTARQWPGTPMDYF-TSGLLA--PSSSSRS----HHSSGFPGQIQLGNSLPQSI 360

Query: 376 SIPQFNISAAENTQQDRLQHFSFV--PDNL-----------NDYNLNFTISAGLA 405
           SI  FN+S  EN Q+  LQHFSFV  PD+L            DYNLNFTIS+GLA
Sbjct: 361 SISPFNVS-GENHQE--LQHFSFVPNPDHLIPVATTQPGPGGDYNLNFTISSGLA 394

[Close]

BLAST of Csa1G025920 vs. NCBI nr
Match: gi|590622371|ref|XP_007025032.1| (Teosinte branched 1, putative isoform 4, partial [Theobroma cacao])

HSP 1 Score: 439.5 bits (1129), Expect = 7.0e-120
Identity = 262/415 (63.13%), Postives = 296/415 (71.33%), Query Frame = 1


Query: 16  MEVLDIQEQACRFPRIGNGRNDSNKLGQKGIVQYTPDDEEDKEFSKRVAVVTSATVNPTG 75
           MEV +IQ QAC+F R+GNGRNDS+K+GQK    Y PDDEED E +KR      A  N  G
Sbjct: 1   MEVEEIQTQACKFSRVGNGRNDSSKIGQKVSDNY-PDDEEDGELNKR------AGANGGG 60

Query: 76  RCEPGGIGGVGANRLHGWHHSSRIIRVARASGGKDRHSKVWTSKGLRDRRVRLSVATAIQ 135
               GG    G NRL GWHHSSRIIRV+RASGGKDRHSKVWTSKGLRDRRVRLSV TAIQ
Sbjct: 61  GGGGGGADTAGTNRLRGWHHSSRIIRVSRASGGKDRHSKVWTSKGLRDRRVRLSVTTAIQ 120

Query: 136 FYDLQDRLGFEQPSKAVEWLIEAASDAIAELPSLSGSFPETPRQLSDEKMGSDGADQGFD 195
           FYDLQDRLG++QPSKAVEWLI+AASDAIAELPSL+ SFP+TP+QLSDEK  S G +QGFD
Sbjct: 121 FYDLQDRLGYDQPSKAVEWLIKAASDAIAELPSLNSSFPDTPKQLSDEKRASGGNEQGFD 180

Query: 196 SPEMELDGDPKKHQQNPRQQLSLARSACSSNSETSKGSGLSLSRSEILVNRAKARDRARE 255
           S E+ELDGDP  +QQN  Q LSL++SACSS SETS+ SGLSLSRSEI   R KAR+RARE
Sbjct: 181 SAEVELDGDPNNYQQNQSQHLSLSKSACSSTSETSRNSGLSLSRSEI---RVKARERARE 240

Query: 256 RTAKEKEREQESRDAH-----CIPNNPSFTELLTGGINNNGANNTTNRTNSASQNNVVEP 315
           R AKEKE+EQESR AH      I  N SFTELLTGGI + G NN  + T SA QN   EP
Sbjct: 241 RAAKEKEKEQESRIAHHQNVNPISQNSSFTELLTGGIGSVG-NNNASPTASAHQNPNGEP 300

Query: 316 NLFDKA--------TAMDYLASSGIIAQQPSSSSSSRPGHNQSAGFSGQIFLGNPHQLPV 375
           + F KA        T MDY  +SG++A  PSSSS S    + S+GF GQI LGN     +
Sbjct: 301 DFFHKANTARQWPGTPMDYF-TSGLLA--PSSSSRS----HHSSGFPGQIQLGNSLPQSI 360

Query: 376 SIPQFNISAAENTQQDRLQHFSFV--PDNL-----------NDYNLNFTISAGLA 405
           SI  FN+S  EN Q+  LQHFSFV  PD+L            DYNLNFTIS+GLA
Sbjct: 361 SISPFNVS-GENHQE--LQHFSFVPNPDHLIPVATTQPGPGGDYNLNFTISSGLA 394

The following BLAST results are available for this feature:

BLAST of Csa1G025920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TCP2_ARATH	2.1e-47	42.49	Transcription factor TCP2 OS=Arabidopsis thaliana GN=TCP2 PE=1 SV=1	[more]
TCP24_ARATH	1.4e-40	43.65	Transcription factor TCP24 OS=Arabidopsis thaliana GN=TCP24 PE=1 SV=1	[more]
PCF6_ORYSJ	1.9e-32	37.05	Transcription factor PCF6 OS=Oryza sativa subsp. japonica GN=PCF6 PE=2 SV=1	[more]
PCF6_ORYSI	3.2e-32	36.45	Transcription factor PCF6 OS=Oryza sativa subsp. indica GN=PCF6 PE=3 SV=1	[more]
PCF8_ORYSJ	5.5e-24	56.67	Transcription factor PCF8 OS=Oryza sativa subsp. japonica GN=PCF8 PE=2 SV=1	[more]

BLAST of Csa1G025920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV70_CUCSA	2.2e-253	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025920 PE=4 SV=1	[more]
A0A061GKS6_THECC	4.9e-120	63.13	Teosinte branched 1, putative isoform 4 (Fragment) OS=Theobroma cacao GN=TCM_029...	[more]
A0A061GDP3_THECC	4.9e-120	63.13	Teosinte branched 1, putative isoform 1 OS=Theobroma cacao GN=TCM_029442 PE=4 SV...	[more]
A0A0D2UNY1_GOSRA	3.6e-107	57.59	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G046000 PE=4 SV=1	[more]
B9S0X3_RICCO	4.7e-107	56.25	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0631030 PE=4 SV=1	[more]

BLAST of Csa1G025920 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18390.1	1.2e-48	42.49	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]
AT1G30210.1	8.1e-42	43.65	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]
AT3G02150.2	7.6e-24	66.67	plastid transcription factor 1	[more]
AT5G60970.1	3.8e-23	63.86	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT5G08070.1	4.2e-22	57.61	TCP domain protein 17	[more]

BLAST of Csa1G025920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208815\|gb\|KGN63911.1\|	3.1e-253	100.00	hypothetical protein Csa_1G025920 [Cucumis sativus]	[more]
gi\|778656591\|ref\|XP_011649359.1\|	3.7e-222	100.00	PREDICTED: transcription factor TCP2 [Cucumis sativus]	[more]
gi\|659068459\|ref\|XP_008444530.1\|	7.0e-221	99.23	PREDICTED: transcription factor TCP2-like [Cucumis melo]	[more]
gi\|590622360\|ref\|XP_007025029.1\|	7.0e-120	63.13	Teosinte branched 1, putative isoform 1 [Theobroma cacao]	[more]
gi\|590622371\|ref\|XP_007025032.1\|	7.0e-120	63.13	Teosinte branched 1, putative isoform 4, partial [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr
IPR017888	CYC/TB1_R_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0048827	phyllome development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0007165	signal transduction
biological_process	GO:0048608	reproductive structure development
biological_process	GO:0031323	regulation of cellular metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006952	defense response
biological_process	GO:0051716	cellular response to stimulus
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0048731	system development
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0050794	regulation of cellular process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU133169	cucumber EST collection version 3.0	transcribed_cluster
CU138117	cucumber EST collection version 3.0	transcribed_cluster
CU151690	cucumber EST collection version 3.0	transcribed_cluster
CU152692	cucumber EST collection version 3.0	transcribed_cluster
CU177273	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G025920.1	Csa1G025920.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU133169	CU133169	transcribed_cluster
CU177273	CU177273	transcribed_cluster
CU151690	CU151690	transcribed_cluster
CU138117	CU138117	transcribed_cluster
CU152692	CU152692	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 107..262 score: 3.5
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 108..166 score: 30
IPR017888	CYC/TB1, R domain	PROFILE	PS51370	R	coord: 243..261 score: 9
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 1..408 score: 3.4
None	No IPR available	PANTHER	PTHR31072:SF2	TRANSCRIPTION FACTOR TCP2-RELATED	coord: 1..408 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G025920	Cla019567	Watermelon (97103) v1	cuwmB029
Csa1G025920	MELO3C002754	Melon (DHL92) v3.5.1	cumeB037
Csa1G025920	ClCG03G006640	Watermelon (Charleston Gray)	cuwcgB053
Csa1G025920	Lsi02G009060	Bottle gourd (USVL1VR-Ls)	culsiB029
Csa1G025920	Cla97C03G057940	Watermelon (97103) v2	cuwmbB051
Csa1G025920	Bhi08G001670	Wax gourd	cuwgoB065
Csa1G025920	CSPI01G04700	Wild cucumber (PI 183967)	cpicuB000
Csa1G025920	Cucsa.111880	Cucumber (Gy14) v1	cgycuB137
Csa1G025920	CsGy1G004580	Cucumber (Gy14) v2	cgybcuB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None