Csa1G015880 (gene) Cucumber (Chinese Long) v2

NameCsa1G015880
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 2202369 .. 2202638 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGGACCAGTTGGGACGAGGCGTTTTTCGACGCCATATCGAGGATCAATCTCGGTTCCAACCTCGGGAGAATCAGTGCGATGGTGGTGACGGTGGTGACGGTGATGGTGGTGGTGATGAGGATGATTATCAACATGGAGATGTTGGAGAAAGAGAGTGAAATCAAATTTAGAAGAGGTCATAAGTTTTCTGTTGGGAGAAAAAGAGGAGATTTTGGAAAGATTGTTGTGATGATTATGAGTAGAAAGTTGATGAAAAAGGATAG

mRNA sequence

ATGGATTTGGACCAGTTGGGACGAGGCGTTTTTCGACGCCATATCGAGGATCAATCTCGGTTCCAACCTCGGGAGAATCAGTGCGATGGTGGTGACGGTGGTGACGGTGATGGTGGTGGTGATGAGGATGATTATCAACATGGAGATAAAGTTGATGAAAAAGGATAG

Coding sequence (CDS)

ATGGATTTGGACCAGTTGGGACGAGGCGTTTTTCGACGCCATATCGAGGATCAATCTCGGTTCCAACCTCGGGAGAATCAGTGCGATGGTGGTGACGGTGGTGACGGTGATGGTGGTGGTGATGAGGATGATTATCAACATGGAGATAAAGTTGATGAAAAAGGATAG

Protein sequence

MDLDQLGRGVFRRHIEDQSRFQPRENQCDGGDGGDGDGGGDEDDYQHGDKVDEKG*
BLAST of Csa1G015880 vs. TrEMBL
Match: A0A0A0LUT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015880 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 5.7e-26
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 1  MDLDQLGRGVFRRHIEDQSRFQPRENQCDGGDGGDGDGGGDEDDYQHGDKVDEKG 56
          MDLDQLGRGVFRRHIEDQSRFQPRENQCDGGDGGDGDGGGDEDDYQHGDKVDEKG
Sbjct: 1  MDLDQLGRGVFRRHIEDQSRFQPRENQCDGGDGGDGDGGGDEDDYQHGDKVDEKG 55

BLAST of Csa1G015880 vs. NCBI nr
Match: gi|700208700|gb|KGN63796.1| (hypothetical protein Csa_1G015880 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 8.2e-26
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 1  MDLDQLGRGVFRRHIEDQSRFQPRENQCDGGDGGDGDGGGDEDDYQHGDKVDEKG 56
          MDLDQLGRGVFRRHIEDQSRFQPRENQCDGGDGGDGDGGGDEDDYQHGDKVDEKG
Sbjct: 1  MDLDQLGRGVFRRHIEDQSRFQPRENQCDGGDGGDGDGGGDEDDYQHGDKVDEKG 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LUT7_CUCSA5.7e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015880 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208700|gb|KGN63796.1|8.2e-26100.00hypothetical protein Csa_1G015880 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G015880.1Csa1G015880.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G015880CSPI01G03560Wild cucumber (PI 183967)cpicuB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G015880Cucurbita pepo (Zucchini)cpecuB024
Csa1G015880Cucurbita pepo (Zucchini)cpecuB352
Csa1G015880Cucurbita pepo (Zucchini)cpecuB381
Csa1G015880Cucurbita pepo (Zucchini)cpecuB509
Csa1G015880Cucurbita pepo (Zucchini)cpecuB643
Csa1G015880Bottle gourd (USVL1VR-Ls)culsiB025
Csa1G015880Bottle gourd (USVL1VR-Ls)culsiB054
Csa1G015880Bottle gourd (USVL1VR-Ls)culsiB071
Csa1G015880Cucumber (Gy14) v2cgybcuB001
Csa1G015880Cucumber (Gy14) v2cgybcuB005
Csa1G015880Cucumber (Gy14) v2cgybcuB196
Csa1G015880Melon (DHL92) v3.6.1cumedB005
Csa1G015880Melon (DHL92) v3.6.1cumedB028
Csa1G015880Melon (DHL92) v3.6.1cumedB047
Csa1G015880Silver-seed gourdcarcuB0416
Csa1G015880Silver-seed gourdcarcuB0491
Csa1G015880Silver-seed gourdcarcuB0543
Csa1G015880Silver-seed gourdcarcuB0621
Csa1G015880Silver-seed gourdcarcuB0622
Csa1G015880Silver-seed gourdcarcuB0856
Csa1G015880Watermelon (97103) v2cuwmbB055
Csa1G015880Watermelon (97103) v2cuwmbB061
Csa1G015880Watermelon (97103) v2cuwmbB079
Csa1G015880Wax gourdcuwgoB040
Csa1G015880Wax gourdcuwgoB071
Csa1G015880Wax gourdcuwgoB114
Csa1G015880Cucumber (Chinese Long) v2cucuB000
Csa1G015880Cucumber (Chinese Long) v2cucuB030
Csa1G015880Cucumber (Gy14) v1cgycuB299
Csa1G015880Cucumber (Gy14) v1cgycuB405
Csa1G015880Cucurbita maxima (Rimu)cmacuB061
Csa1G015880Cucurbita maxima (Rimu)cmacuB087
Csa1G015880Cucurbita maxima (Rimu)cmacuB110
Csa1G015880Cucurbita maxima (Rimu)cmacuB221
Csa1G015880Cucurbita maxima (Rimu)cmacuB393
Csa1G015880Cucurbita maxima (Rimu)cmacuB404
Csa1G015880Cucurbita maxima (Rimu)cmacuB686
Csa1G015880Cucurbita moschata (Rifu)cmocuB076
Csa1G015880Cucurbita moschata (Rifu)cmocuB050
Csa1G015880Cucurbita moschata (Rifu)cmocuB095
Csa1G015880Cucurbita moschata (Rifu)cmocuB207
Csa1G015880Cucurbita moschata (Rifu)cmocuB389
Csa1G015880Melon (DHL92) v3.5.1cumeB010
Csa1G015880Melon (DHL92) v3.5.1cumeB033
Csa1G015880Melon (DHL92) v3.5.1cumeB055
Csa1G015880Watermelon (Charleston Gray)cuwcgB058
Csa1G015880Watermelon (Charleston Gray)cuwcgB063
Csa1G015880Watermelon (Charleston Gray)cuwcgB082
Csa1G015880Watermelon (97103) v1cuwmB039
Csa1G015880Watermelon (97103) v1cuwmB063
Csa1G015880Watermelon (97103) v1cuwmB095