Csa1G008510 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G008510
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 1325705 .. 1331465 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGTGGAAACCAAAGCATGGCTCGTGATTGGGTACGGCAAAGGCAGGAGCGGCGCGTGGTGGTGCGGTCGTTTGGTGCTACCAAAGCAGAGTACCACGGTTGGTGTACGGAATCTACGTGTTCTTTCTTATAGGGACACCCAAAACACACTATCACGTGAAAATTCCTCTCTTGTCCCTTCATTTTCCACTATGCTTTTCCAATCCCACACCTTCCCATGCCAAATCATATCCATGCACCTCACTTTTCATCTTTTTTTTTTTTTTTTTATCGGCCTCTCGAACTTTCTACCTAGATAGTTAGAGGCTTTTGTGACGTAGAGTGAGTTATTAGAATATGTGGTTATATTGAAGTCTTTGAATTATAATAGTTTATAAGGGGTAGATTATTATAGTTTGAATTATTATAATCTATATTTGAAAAAAATAAATAATAGTGAAATGGGAGAGTGAAGATTTGTGATGTATTGGAGAGACGGGAGGTGAGGAATAGTGAAAGGATGGAGGAAGAAATATAAGAAATAATGGAAAAAAAATAGAATAGTTATAATTATGTTATTATGATAATCTTTGAAACAAACATACAGTGGGCTAACTCCTTCATAAACAAACATAACGTGAAACGACCCCTAAAGATGTTAAAATTTTCTAAAGTTGTTGAAATTTTATAATTTACCATAATTATAAAAATTGGATATCAAACTTATATAATCAATACAATTTATACAATTATGTAAGCTCAAAAGTTTAATTTCAAAGTTTGAATAAATTTGACATGCCCAGTTTTTTTAATTTGAAAATTTAAGGATGATTTTTGCAATTTTACACTACATGGTGTCGAACTATTGAACATTTTACTTTTTCTTAGTTGATAGTATGACTGTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTCCAGAAACGTGAGCATGTGCATAACACACACGATTTCAATGATAGTTTTATATCACTATAGCATAGACTAAGACACAGACAAGTGTTAAAAAATTATACAAAATAATATATCAACTAATGACATGATAAAGTAAGAACGTAAGGAATATACAGTAACCCAATTCTAGAAAAGTAGTGGTTGGATTGTACATATTCATATTTCGTCTATACTCAACATTTTACTATATGATAATATAATTTAAATTGTCAATAGCAAGTACAACTATATAGAAATTGAAATTGGACTTCTCATCCTCATAAATTTCTCAAACCTTGTCTGACTTTGTCGTCACATGCAGTCTTACACGTCCTCGATTATTGACCATTTTTTCAAACCAACATTGCTTTATCGAAGTAATAAACATCTTTATTTTATACCAACTATTTTTAAAATATTAAAAGTTATTTATTTATATTTATACTTAAATGATAAAAAAAACAACTTTTTAAAACAAAAGTCTATTATTATAAGTGTCTATTATATTGTAATATGAGTTTATAGACGATAAAATTTGTTTTCAATTATTGAAAAGAAAAAGGAATGAAAAAGAGAGAAGCAATAATGTAAGCAAGCAAAGGATAGGTGGCCTTTTAAAAGCACTCAAATTGCCTTTAAAAGAACTTTGTCTTGGAAATTGGAGAACCTTTATGGAATCAAAAGTTGTGCATTGCCTTTTAAGAAAAACTTTATATAATTTTCTCACTTTGTTTTAAGATATTTATTTTATAAATAAATAAATAAATAAATTTTCTTTTTGTTCCTTGTGATGGCTTTTATTAAATTAAGATAGATTTTAATAACTTCAAATTGGATATGTTACAAAGTAAGGTTAACAAAATTGAAAAGAATGGGTAAAAAATTGTTCAGAAAACAATGATAAATAAATCGAAATATTTATGAGTTATAGGAAGATTTTGAATTCTATTTTTTTCAAAAATTTCATATTTTACTTTTAAAAATTCTTCTAAAACGAATCTTAATTATTTTTTTTAGAAATAAGCTTATAAGCCCTACTTAGTTTATATCATACACTTTTAAATAATGTTTTTAAAACTAAACTATATATAATTTTTAAATTTAGACTTTTACTAAAATATAATTTCTTAACCAAATTGAGAAAATTAAATTTGAATAATTATAGTTGGACATTTAATCTAAACAACTCCTTTTACTTTAGTTTTAATTAATTTACAAGTGGGTGCACCAAATTTAGAAGCTGAATGATATTGATTTTTTCTTTTTTATAAACCAATGAATGAATTAGTGGACATAAAAGTTGATGGTGCAATAGATTTTATTTATATTGTTGGGTTATTGTGAGCCAATGACATACATCAAAGATGGTGTGATCCATTTGTAATATAGTGGTTGAGTTTGAAGGTTAGGTACAACCACAAATATGTATGATATGGATTACCAAACATCTAATAGGCATGATTTCTCCACCATTTTTCCTAACTATCTTAATCTAACATTATTTAGAGTATAACCCGATATCATTTTAAATACTATTCTTGTTTTACGTATGACTTAAGTTTTGGTTCATTTCATATGTCACTGTACTTTTAAAATATCTACGTTGGTTTTTATACTTTTAAAACGTGGCAATAACTTTCATGAAGACATCAAAATGGTTGCTTTTGAAAAGTTTCGGGGCCAAATCAAGTAGAAAGTATGAGAATAAGTGTGTACGTTTGGAAGTACAAAAACTAAAATAAACCAATGTCAGAAAGTACATTGACGACCAAAATTAACAAAAACTAGAAGTTGAAGGACTATAATAGTATTTAAACCTACTAACACGACCATTCACTATAAATAGATATTATTATACATTTTTCTCAACACGTGTCGATATATTAAAATCTCGATCTCCTGTGCACCCATTTTCCAACTACATGAATGTGATAGATTTCCTCTACTTAATTTATCTAAATTTACAAGGCTAAACTCAATAGTATCGAAAGTTATTTCAACACTCTTTCATCTCACGTGCTTCTAAACATTTATTTTCATTATACTTTTACACTTCGATTTTACCGAGTTAAAAAACAATAACAAATAACATAGAATGTATTACACGTGTATTTTCCTATTATGTAGACATAGCCGTACAAATTAAGAATGAACCGTGGTTATGAATTGTCATACCTAATTAGTTCCTAACTAATTGCTGGGTGGTAGAGAAATATGTGATATTGTGACAAAGTTGATTTGATGAAATTTGCAAAAATTAACCAAAGTTTGAATTTGTTAGGCATTTGTAGAATTGGAAGGGGATAAAGTTATTGGATGAGGATAAGGTGTAAATGCAAGCATGTGCAGTTCATTATTTTTAGCTCTACCTCTCTCCATTACCATTTCCCACAAGTTTACAATCTTTTTCTTTTTCTATATTAAATGTATAAATATCATTTCCTCAAGAACAGAAAAAAAAAGAAAAAAGAAAAAGAAAAAGTATATATATAAATAAACTTCCTTATATTTATTTTTATTGTATTTTCTTTTAAATTTTAATCCCAACCTTATATATACAAAAAAAACGATAACATTCTTGGATTTGTAAGAATTTTACAAACAAGAATAAAATGATGAGATGTTTAAAGATATAAACATCAAAATGAAGTTGATAAATGTAACAAATTAATATCTATAGATAATGATCGTTGAACTATGTTTACTTTAATAATAAATTGCAAAAACGAAAATCGACCAACTTGTAAAGAAAGAATGACCATAGGTGTTATAGTCGAGCTAAATTCGACATTAAATATACATAAATATGTGTGTATGTATTGGTTAATTTTGTGTGTGGAGTCCATTACCGGTGTCACTATCTCTCTCTCTCACTCCGCCCACGACTGGCTATATTTTTTTTCATTCTTTCCTTCATTCTCTTTCTCCCTCACTCTCAAGTCTCACATCTTTCTCTTCCCTCCTTAACTCTCCCTCTTTCTTACTTCTCATATCATCTCTCTCCTCACGTTCTCCATCTTCTTCCGTTCTCACTTCCTCTCTCTGCCTTTTCAGTTTTTTCCCTCTCTGCCATACTTTACTCAGTGTAATTTGTCCGGAAACATGCTCAAATGGGTGCCTGAATCGACTGCTCATCTTTGTCCGGCGAGAGATTAGGTCGAGTTCTCGTCATTCAACTTCAAAAACCTGTAACAGAGCGTTCAACCGGAGACATCTCAATCTTTCTCACCAGCGCTACTGCGAATCGTTATCTAGCATTGGGATTTGAGTCTATCATAGGTATTTTTCTTCCTTTCATACTTCTCTATTTAATTATCGTGGGCTTCAACTCTGAAAGTGTTACTAATCTTGAGTTCAATTCCGTTTTTTTTCTTCGTGTTTTTGTTATTATCATTATGATTCTTGTTTAGAGCTACTACTTATCAATTTTTGTTTTTAGTTTAGAATTTTCAATGAAGAAATGAGTTTGGGTTACTTTTTATTTGTTTATTTGAGTAGGGCTTGACCGGTTTAGAAGTGCGCGAAACCTGTTGTCGAGTAAAGTGATTTTTTTAAAAAAACAAAGACAATGTTAAATCGAATAGGTTAAAATAGTTTAGGGTTTATTGATAATGAGTAACATGTCTTTTCGAATTTCGAAGAGGAATTGAAAATTTACTCCACATTAAAAAGATAAATTAAAATTTTAAATATTTTTATGTTGTTTTATATTTAATTATCTTCTTTTGAAACACAATGATGAATTTTCATTTGACCGTAAAATTATCCCTCGGAATTTTTTTTTCTTCTTAATTTTAATGCTTAATTCGTAAATTTCCTTCCTATAAAAAAGTTGAATTTAGAGTTTAGTTTGCGACAATTTTTAAGATTTTTTTTAGGAAGGAGTAAATTATTAAGACTATGACACCATTTTAGATATTCTATTTTAGGGACTAGTCATATATTTTTTTAAAAAATTTGTATCCAAATAGTAAAAACATTTATAAAAAATAGCGTATAATTTTTTTTTTATTTTGGACTAGTAATTAGAGGATTATTAATTTTTTAATTTGTTATTTTTGTAATTTAAATAATGTAATACCTTCTATTATCATAAATTTTATTTTTTTATTTACAAAGGCTTACTTTCCAATTTAAATCATATATTTAAAATGAGATTAAATTATTTTTTAAATGGTACCAAATTTAGAATTAACCTGTTTTTGATTTAAATATATGAATTAGAATCGTTGGGAATATATTTGTCTTAATTAGTTGAATAAGGTTGGTATGATTTTGTGGAAAACTGATTCCACCAAATTGAATTGTTGTTTATTTTGACTAATTTTGACTTAAGTTCTTACTGTTTTTTCTGATTACGTAGTCTATTAAACTCATGTATAGTTTCTCAGTTATAATAATTCCCTAAATTTAAATTCCACTTGAGTGTAAAAGGGAAAATAGAAGTTGAATTCATCAAAATGACCACATTAAATGGATAGATTAATGACATTTTTCCCCCCTTCTTTAGAGTGGTAGCAAGGTTTGAAGTTTTGCACTTTTCATAAAGATTATTTAATGGGGGATTATTATTTTAACTAACCAACTCTACTGCTGCTCTAAACGCTACATGCAGTTGCTCTCTGTTTCTGCATTTTTTTTTTTTAATTTTTGGAAGCTGATGGGCTTCTCATTTTCTGCTCCAGAATTTTCACCGTTGATTTCTCGCTTGGTTTGATATCCTTTTGTTATTTCGGTAATCTGAGGAAACACTTTCTTGCCTTGTATTTGGTGGTTTGGTTTGTAGTGTTTGGTGACCATTGGAGATTTTGA

mRNA sequence

ATGGCAAGTGGAAACCAAAGCATGGCTCGTGATTGGGTACGGCAAAGGCAGGAGCGGCGCGTGGTGGTGCGGTCGTTTGGTGCTACCAAAGCAGAGTACCACGAGCGTTCAACCGGAGACATCTCAATCTTTCTCACCAGCGCTACTGCGAATCGTTATCTAGCATTGGGATTTGAGTCTATCATAGTGTTTGGTGACCATTGGAGATTTTGA

Coding sequence (CDS)

ATGGCAAGTGGAAACCAAAGCATGGCTCGTGATTGGGTACGGCAAAGGCAGGAGCGGCGCGTGGTGGTGCGGTCGTTTGGTGCTACCAAAGCAGAGTACCACGAGCGTTCAACCGGAGACATCTCAATCTTTCTCACCAGCGCTACTGCGAATCGTTATCTAGCATTGGGATTTGAGTCTATCATAGTGTTTGGTGACCATTGGAGATTTTGA

Protein sequence

MASGNQSMARDWVRQRQERRVVVRSFGATKAEYHERSTGDISIFLTSATANRYLALGFESIIVFGDHWRF*
Homology
[Close]
BLAST of Csa1G008510 vs. TrEMBL
Match: A0A0A0LP17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G008510 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.8e-32
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MASGNQSMARDWVRQRQERRVVVRSFGATKAEYHERSTGDISIFLTSATANRYLALGFES 60
          MASGNQSMARDWVRQRQERRVVVRSFGATKAEYHERSTGDISIFLTSATANRYLALGFES
Sbjct: 1  MASGNQSMARDWVRQRQERRVVVRSFGATKAEYHERSTGDISIFLTSATANRYLALGFES 60

Query: 61 IIVFGDHWRF 71
          IIVFGDHWRF
Sbjct: 61 IIVFGDHWRF 70

[Close]
BLAST of Csa1G008510 vs. NCBI nr
Match: gi|700208549|gb|KGN63645.1| (hypothetical protein Csa_1G008510 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-31
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1 

Query: 1  MASGNQSMARDWVRQRQERRVVVRSFGATKAEYHERSTGDISIFLTSATANRYLALGFES 60
          MASGNQSMARDWVRQRQERRVVVRSFGATKAEYHERSTGDISIFLTSATANRYLALGFES
Sbjct: 1  MASGNQSMARDWVRQRQERRVVVRSFGATKAEYHERSTGDISIFLTSATANRYLALGFES 60

Query: 61 IIVFGDHWRF 71
          IIVFGDHWRF
Sbjct: 61 IIVFGDHWRF 70

The following BLAST results are available for this feature:
BLAST of Csa1G008510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP17_CUCSA8.8e-32100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G008510 PE=4 SV=1[more]
BLAST of Csa1G008510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208549|gb|KGN63645.1|1.3e-31100.00hypothetical protein Csa_1G008510 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU133385cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G008510.1Csa1G008510.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU133385CU133385transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G008510Cucumber (Chinese Long) v2cucuB001
Csa1G008510Cucumber (Chinese Long) v2cucuB029
Csa1G008510Watermelon (97103) v1cuwmB094
Csa1G008510Cucumber (Gy14) v1cgycuB107
Csa1G008510Cucumber (Gy14) v1cgycuB299
Csa1G008510Cucumber (Gy14) v1cgycuB404
Csa1G008510Cucumber (Gy14) v1cgycuB475
Csa1G008510Cucurbita maxima (Rimu)cmacuB048
Csa1G008510Cucurbita maxima (Rimu)cmacuB097
Csa1G008510Cucurbita maxima (Rimu)cmacuB209
Csa1G008510Cucurbita maxima (Rimu)cmacuB235
Csa1G008510Cucurbita maxima (Rimu)cmacuB402
Csa1G008510Cucurbita maxima (Rimu)cmacuB685
Csa1G008510Cucurbita moschata (Rifu)cmocuB076
Csa1G008510Cucurbita moschata (Rifu)cmocuB037
Csa1G008510Cucurbita moschata (Rifu)cmocuB194
Csa1G008510Cucurbita moschata (Rifu)cmocuB222
Csa1G008510Cucurbita moschata (Rifu)cmocuB390
Csa1G008510Cucurbita moschata (Rifu)cmocuB673
Csa1G008510Melon (DHL92) v3.5.1cumeB009
Csa1G008510Melon (DHL92) v3.5.1cumeB019
Csa1G008510Melon (DHL92) v3.5.1cumeB054
Csa1G008510Watermelon (Charleston Gray)cuwcgB015
Csa1G008510Watermelon (Charleston Gray)cuwcgB062
Csa1G008510Watermelon (Charleston Gray)cuwcgB081
Csa1G008510Watermelon (97103) v1cuwmB037
Csa1G008510Watermelon (97103) v1cuwmB055
Csa1G008510Cucurbita pepo (Zucchini)cpecuB025
Csa1G008510Cucurbita pepo (Zucchini)cpecuB361
Csa1G008510Cucurbita pepo (Zucchini)cpecuB520
Csa1G008510Cucurbita pepo (Zucchini)cpecuB653
Csa1G008510Bottle gourd (USVL1VR-Ls)culsiB070
Csa1G008510Bottle gourd (USVL1VR-Ls)culsiB035
Csa1G008510Cucumber (Gy14) v2cgybcuB001
Csa1G008510Cucumber (Gy14) v2cgybcuB011
Csa1G008510Melon (DHL92) v3.6.1cumedB004
Csa1G008510Melon (DHL92) v3.6.1cumedB014
Csa1G008510Melon (DHL92) v3.6.1cumedB046
Csa1G008510Melon (DHL92) v3.6.1cumedB060
Csa1G008510Silver-seed gourdcarcuB0391
Csa1G008510Silver-seed gourdcarcuB0524
Csa1G008510Silver-seed gourdcarcuB0638
Csa1G008510Silver-seed gourdcarcuB1018
Csa1G008510Watermelon (97103) v2cuwmbB004
Csa1G008510Watermelon (97103) v2cuwmbB060
Csa1G008510Watermelon (97103) v2cuwmbB078
Csa1G008510Wax gourdcuwgoB060
Csa1G008510Wax gourdcuwgoB070
Csa1G008510Wax gourdcuwgoB095