CsGy7G018390 (gene) Cucumber (Gy14) v2

Overview
NameCsGy7G018390
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionphotosynthetic NDH subunit of subcomplex B 1, chloroplastic
LocationChr7 : 21450553 .. 21454167 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGAGAAATAGTAATATTTAAGAAAAAGAGAGACGTTAGAGGGAGTGAAAGGCTTATCCAAATCCAAACCTTCCTTCCACACATTTCTGAAGATCAAATTACCTAAACGCTATGGAATTTCAATCCAAATCCCCAAAGAAACTACCTCCCAACACTCATCCATGGCTACTTCTTCTCTACCCACCAAATCCCTTCCCCCATTTTTGCCCACTTCAAGCTTTCCACCTTCTTCTCCTTCAACCCACTTCACAAAACCCTTTTTTCTATCCCCACCACTAATTTCTCTCTCAACTTCTTCAAAATTTCAAATCCCCTGTTCCAAGAAGAATCCATGGTTTGACCCATTCGACGACGGCGAGGATCCGGAGATGGAGTACGGCTCTCTCTACTCTGACGGGAAGCAGGAAGAGGATCCTCGGCCGCCGGATAATCCGAACAATCCATATGGGTTCTTGAAATTTCCTCAGGGTTATATGGTGGAAGTCGCTTCCCTGGGTCTCAAAATCCGGGGAGATGTGCGGCGGTGCTGCTGCGTGATCTCTGGGGGTGTTTATGAGAACCTTCTCTTCTTTCCGACGATTCAATTGCTTAAGGATCGGTACCCGGGTGTTCAAATCGATGTGGTGACTTCGGCGAGGGGTAAACAGACTTTTGAATTGAATAAGAATGTGCGATGGTCTAATGTGTATGATCCGGATGATTATTTTCCTGAACCAGCAGAGTATACTGACATGGTTGGATTGCTCAAGGTCGGTTCCAACAATTTACCTTGAATTTGGACAGAACAGTATTGCTAGTGATTCTACATGTTTTGGTGTATGAAAGGTTTTAAATATTGCGATCCTACAGAGACTTCTTTCAAGAAATGGGCTAGACTGACATTTGTAGAGAACAATAGCCAAGGATTATCACGCTTCTACTTGGATATGGAACTTTCATGATGCTCATAATTGGTAGACATAGTAGTGATTTTGAGATCACTTGAAAAGAATTTAGTGCTGCCCATCTTGGCCAACACTCCGATAACTTTCTTTGATTGAGTGGGATGCATTCACTCTGTCCTCGTTTTTCCAATTATGAAACATGACTAAGTGATCCTACCGACATTGGCCCTAGTGTCCAAGTGGTTTGGCCAATAGTGGGTCAAGAAATATTGAATGGTGATGGAGGCAGGGGTTTTCAAGATTGAACAATGGCTGTGGTAGGAATGGTATTTAGGGTGTAATTGGGATATTAAAAGTATGATAGTAATTAATAGGTTTTTATGATATTTGATTATAAATATAGAGGGAGAGGAAAGGAGAAGCTAGCCAATATCTTGGCTTGAGAGTGATCTCAAGAAGGGAGGGTCAAGTACCTCAAATTACTTGGTTTGTTTTGTAGTTTGGTTATTGTTTATATTCCAATATATCAGGTTCTATCAAGTTGTTAGGGAAAAATAAAATTTGAATCTATACCAAACCATCAAATAGGGTGGTCACATTGAATAATTTTGGAATTTGTAGGGTTTAAGCTTTAACTTAGTTAAGTGAGAATTAGAGAAATTCGGACTGATTTGAGTGGTGTAACTGGTTTCATTGTTGTTGCAGGGCAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGCTTGGGCATGCTGTGTTTTTGTTTATGACAACTGCCAGAGACAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTATTCCTGTCCGAAACATTTAAACCAGAAAGCTCTAATCTTTCTGAGGGAGGGTTCAACATGTGAGAAAATTTTATGGTTTTTGTTATAAATTTGTACAAAAGTTTTCATATAAGCATTTGAGCCTAATATTAGTTTGAGATAGCTTTGGGGTGGGAGTTACTTTGTTGATAATCACTCACTGCGATGTTATGCTTATTTTCTAAGCCACGAAAGGAGGATGCCAATAATGTATATATGGAATATGTTATATTTCTTTAACTTATCAATATAAGCTTTTAGGTTTAGTATAAGACCATAACTTATTAGTTTAAACTTTTAGATTTAGTAGTAGTTTGTTGTTTTTAAATTCAAAAGAATTTGATCGTTTGTCTTTTAGTTAACTCAATCCTCCTCTATGATATGAGGAGCAGTTTCTTGCCTCTAAATGAGAAAAGTGTGGCTTTTATCAGAGGACAATAGTAGTTTTTATATGCAAACTTATGAACCAAAGAGAAATATCTAGCTCAAACTTCTACCTTTTTGATGCCTTGAAGGCCGATTTTCATGATTTAGGTATCATCAAATGGTTGACTGGTTGGGGAGGCCATTTCGTAGTGTTCCCAGGCATCCCGTTCCTCCACTTAAAGTTTCAATTGCGAGGAAATTGAAGGAGGTTATAGCAGAAAAATATAAGAAAGCAGGTGCTGAGAAGGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCGAAAGCCTCCATGCAGTCCAAAGGTGATACTGATAGCTTGCTACCCATTCGAGCTTGGGCAGAAATAGCCAAGTGTATAAGGTTGGTACCATGTCAATATCTTCATCGGAAAAAAAGATGCATTATAGGCTTATACAAATGGATTGAAGGAAATAAAAAGTAACTTGATGCTGCTTTTTTCTCTCACTATCTTCTGATGATAATGTTTGTTGAATCTAAATACAGGGGATTCAAGCCAGTCTTTGTCATTCCACATGAAAAGGAACGGGAAAGTGTAGAGGAGGAGGTCGGCAATAATGCAAGCATAGTATTTATCACGACTCCCGGACAGGTATCCATACGATCCTTCTTTCTCTTTTAGTGTTGATGAGTAAACTGCAAAAGGATAAATACACAAAACACAATGTTAACTAAGAAATCAAGGAAAAATGAAGAGGATACGGTTACAAAGAAATTGATAAAAGTTCAGTGCCTAAACATATCATTCTTAACTGCAATGTGTAGCTAGCTGCTCTCATTAATGACTCGGCCGGTCTAATCGCTACCAACACAGCTGCTGTCCAACTTGCCATTGCTCGTGAAAAACCAAGGTATTGTTCTGTTTCTCCTTCATAGAAACTCAATAGTTTGCTTACTGATCTTAAAATCTTCCATCTGCTATGGAAAGAACTGTGGTTGACATGTTATGTGGTGCCAATGTGTTTACAGCATTGCCTTGTTTTGTTCTGAAGAGAAGGCAAAACTATTTGTTCCCAACGCTGAAGCAAAGAGATGCATCACAGTTTCGTCAGCAACAGGACGGCTAATCGACATCGATATGGGAACAATTAAAAAGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCCTTTCAGTGACATCATAGATTTTTCTTATCCTATTTGTGCTTATCATCTAGATATTCTTTCATTTTGTTTCACCTATGTTACCATTAGTTGTAAATCAAAGCGTTGGCAATGAAAGAAGAGTAATTGTATATGTTGTGCCTGGTGTAGCTATTTTTTCAGAGTTGTTCTCCATTTGTTTTCTTCCTAAGTGGCTTGTTTTGGTTTTGGGAAACACCAAACTTAAGTTCTGACAAGGTAAGTCAAGATTCATTTGGGCCTCTCAAATTCATTCTTACAAAAAATCTCACATTGTTC

mRNA sequence

GGGAGAAATAGTAATATTTAAGAAAAAGAGAGACGTTAGAGGGAGTGAAAGGCTTATCCAAATCCAAACCTTCCTTCCACACATTTCTGAAGATCAAATTACCTAAACGCTATGGAATTTCAATCCAAATCCCCAAAGAAACTACCTCCCAACACTCATCCATGGCTACTTCTTCTCTACCCACCAAATCCCTTCCCCCATTTTTGCCCACTTCAAGCTTTCCACCTTCTTCTCCTTCAACCCACTTCACAAAACCCTTTTTTCTATCCCCACCACTAATTTCTCTCTCAACTTCTTCAAAATTTCAAATCCCCTGTTCCAAGAAGAATCCATGGTTTGACCCATTCGACGACGGCGAGGATCCGGAGATGGAGTACGGCTCTCTCTACTCTGACGGGAAGCAGGAAGAGGATCCTCGGCCGCCGGATAATCCGAACAATCCATATGGGTTCTTGAAATTTCCTCAGGGTTATATGGTGGAAGTCGCTTCCCTGGGTCTCAAAATCCGGGGAGATGTGCGGCGGTGCTGCTGCGTGATCTCTGGGGGTGTTTATGAGAACCTTCTCTTCTTTCCGACGATTCAATTGCTTAAGGATCGGTACCCGGGTGTTCAAATCGATGTGGTGACTTCGGCGAGGGGTAAACAGACTTTTGAATTGAATAAGAATGTGCGATGGTCTAATGTGTATGATCCGGATGATTATTTTCCTGAACCAGCAGAGTATACTGACATGGTTGGATTGCTCAAGGGCAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGCTTGGGCATGCTGTGTTTTTGTTTATGACAACTGCCAGAGACAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTATTCCTGTCCGAAACATTTAAACCAGAAAGCTCTAATCTTTCTGAGGGAGGGTTCAACATGCCGATTTTCATGATTTAGGTATCATCAAATGGTTGACTGGTTGGGGAGGCCATTTCGTAGTGTTCCCAGGCATCCCGTTCCTCCACTTAAAGTTTCAATTGCGAGGAAATTGAAGGAGGTTATAGCAGAAAAATATAAGAAAGCAGGTGCTGAGAAGGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCGAAAGCCTCCATGCAGTCCAAAGGTGATACTGATAGCTTGCTACCCATTCGAGCTTGGGCAGAAATAGCCAAGTGTATAAGGGGATTCAAGCCAGTCTTTGTCATTCCACATGAAAAGGAACGGGAAAGTGTAGAGGAGGAGGTCGGCAATAATGCAAGCATAGTATTTATCACGACTCCCGGACAGCTAGCTGCTCTCATTAATGACTCGGCCGGTCTAATCGCTACCAACACAGCTGCTGTCCAACTTGCCATTGCTCGTGAAAAACCAAGCATTGCCTTGTTTTGTTCTGAAGAGAAGGCAAAACTATTTGTTCCCAACGCTGAAGCAAAGAGATGCATCACAGTTTCGTCAGCAACAGGACGGCTAATCGACATCGATATGGGAACAATTAAAAAGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCCTTTCAGTGACATCATAGATTTTTCTTATCCTATTTGTGCTTATCATCTAGATATTCTTTCATTTTGTTTCACCTATGTTACCATTAGTTGTAAATCAAAGCGTTGGCAATGAAAGAAGAGTAATTGTATATGTTGTGCCTGGTGTAGCTATTTTTTCAGAGTTGTTCTCCATTTGTTTTCTTCCTAAGTGGCTTGTTTTGGTTTTGGGAAACACCAAACTTAAGTTCTGACAAGGTAAGTCAAGATTCATTTGGGCCTCTCAAATTCATTCTTACAAAAAATCTCACATTGTTC

Coding sequence (CDS)

ATGGTTGACTGGTTGGGGAGGCCATTTCGTAGTGTTCCCAGGCATCCCGTTCCTCCACTTAAAGTTTCAATTGCGAGGAAATTGAAGGAGGTTATAGCAGAAAAATATAAGAAAGCAGGTGCTGAGAAGGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCGAAAGCCTCCATGCAGTCCAAAGGTGATACTGATAGCTTGCTACCCATTCGAGCTTGGGCAGAAATAGCCAAGTGTATAAGGGGATTCAAGCCAGTCTTTGTCATTCCACATGAAAAGGAACGGGAAAGTGTAGAGGAGGAGGTCGGCAATAATGCAAGCATAGTATTTATCACGACTCCCGGACAGCTAGCTGCTCTCATTAATGACTCGGCCGGTCTAATCGCTACCAACACAGCTGCTGTCCAACTTGCCATTGCTCGTGAAAAACCAAGCATTGCCTTGTTTTGTTCTGAAGAGAAGGCAAAACTATTTGTTCCCAACGCTGAAGCAAAGAGATGCATCACAGTTTCGTCAGCAACAGGACGGCTAATCGACATCGATATGGGAACAATTAAAAAGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCCTTTCAGTGA

Protein sequence

MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLIDIDMGTIKKAIQSFEVPLALAFQ
Homology
[Close]
BLAST of CsGy7G018390 vs. NCBI nr
Match: XP_004136098.1 (PREDICTED: photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucumis sativus] >KGN45218.1 hypothetical protein Csa_7G431990 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 7.6e-102
Identity = 196/203 (96.55%), Postives = 196/203 (96.55%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI       GAEKGKYIVIHGIESDSKASM
Sbjct: 264 MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYRKAGAEKGKYIVIHGIESDSKASM 323

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA
Sbjct: 324 QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 383

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI
Sbjct: 384 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 443

Query: 181 DIDMGTIKKAIQSFEVPLALAFQ 204
           DIDMGTIKKAIQSFEVPLALAFQ
Sbjct: 444 DIDMGTIKKAIQSFEVPLALAFQ 466

[Close]
BLAST of CsGy7G018390 vs. NCBI nr
Match: XP_008461180.1 (PREDICTED: photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 1.8e-98
Identity = 190/203 (93.60%), Postives = 192/203 (94.58%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI       G EKGKYIVIHGIESDSKASM
Sbjct: 264 MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYKKAGVEKGKYIVIHGIESDSKASM 323

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGDTDSLLPIRAWAEIA CIRGFKPVFVIP EKERE+VEEEVGNNASIVFITTPGQLA
Sbjct: 324 QSKGDTDSLLPIRAWAEIANCIRGFKPVFVIPREKERENVEEEVGNNASIVFITTPGQLA 383

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVP+AEAKRCITVSS TGRLI
Sbjct: 384 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGRLI 443

Query: 181 DIDMGTIKKAIQSFEVPLALAFQ 204
           DIDMGTIKKAIQSFEVPLALAFQ
Sbjct: 444 DIDMGTIKKAIQSFEVPLALAFQ 466

[Close]
BLAST of CsGy7G018390 vs. NCBI nr
Match: XP_022953552.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 357.8 bits (917), Expect = 2.4e-95
Identity = 180/203 (88.67%), Postives = 192/203 (94.58%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           MVDWLGRPFRSVPRHPVPPLKVSI+RKLKE++       G EKGKYIVIHGIESDSKASM
Sbjct: 269 MVDWLGRPFRSVPRHPVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASM 328

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGDTDSLLPI+AWAEIA  IRGFKPVFVIPHEKERE+VEEEVG+NASIVFITTPGQLA
Sbjct: 329 QSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLA 388

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAG+IATNTAA+QLAIAREKPSIALFCSEEKAKLFVP++EAKRCI VSSATGRLI
Sbjct: 389 ALINDSAGVIATNTAAIQLAIAREKPSIALFCSEEKAKLFVPDSEAKRCIAVSSATGRLI 448

Query: 181 DIDMGTIKKAIQSFEVPLALAFQ 204
           DIDMGT+K+AIQSFEVPLALAFQ
Sbjct: 449 DIDMGTVKRAIQSFEVPLALAFQ 471

[Close]
BLAST of CsGy7G018390 vs. NCBI nr
Match: XP_022992479.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 357.5 bits (916), Expect = 3.1e-95
Identity = 180/203 (88.67%), Postives = 191/203 (94.09%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           M DWLGRPFRSVPRHPVPPLKVSI+RKLKE++       G EKGKYIVIHGIESDSKASM
Sbjct: 269 MADWLGRPFRSVPRHPVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASM 328

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGDTDSLLPI+AWAEIA  IRGFKPVFVIPHEKERE+VEEEVG+NASIVFITTPGQLA
Sbjct: 329 QSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLA 388

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAG+IATNTAA+QLAIAREKPSIALFCSEEKAKLFVP+AEAKRCI VSSATGRLI
Sbjct: 389 ALINDSAGVIATNTAAIQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCIAVSSATGRLI 448

Query: 181 DIDMGTIKKAIQSFEVPLALAFQ 204
           DIDMGT+K+AIQSFEVPLALAFQ
Sbjct: 449 DIDMGTVKRAIQSFEVPLALAFQ 471

[Close]
BLAST of CsGy7G018390 vs. NCBI nr
Match: XP_023548446.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 5.8e-94
Identity = 179/203 (88.18%), Postives = 189/203 (93.10%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           MVDWLGRPFRSVPRH VPPLKVSI+RKLKE++       G EKGKYIVIHGIESDSKASM
Sbjct: 269 MVDWLGRPFRSVPRHLVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASM 328

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGDTDSLLPI+AWAEIA  IRGFKPVFVIPHEKERE+VEEEVG+NASIVFITTPGQLA
Sbjct: 329 QSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLA 388

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAG+IATNTAA+QLAIAREKPSIALFCSEEKAKLFVP AEAKRCI VSS TGRLI
Sbjct: 389 ALINDSAGVIATNTAAIQLAIAREKPSIALFCSEEKAKLFVPEAEAKRCIAVSSTTGRLI 448

Query: 181 DIDMGTIKKAIQSFEVPLALAFQ 204
           DIDMGT+K+AIQSFEVPLALAFQ
Sbjct: 449 DIDMGTVKRAIQSFEVPLALAFQ 471

[Close]
BLAST of CsGy7G018390 vs. TAIR10
Match: AT1G15980.1 (NDH-dependent cyclic electron flow 1)

HSP 1 Score: 275.0 bits (702), Expect = 3.7e-74
Identity = 142/201 (70.65%), Postives = 165/201 (82.09%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           M DWLGRPFRSVPR P+ PL+VSI+RK+KEV+       GA  GK+IVIHGIESDSKASM
Sbjct: 260 MEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAKYRNAGAVTGKFIVIHGIESDSKASM 319

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGD DSLL +  WA+I K +RGFKPVFVIPHEKERE+VE+ VG++ SIVFITTPGQLA
Sbjct: 320 QSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEKERENVEDFVGDDTSIVFITTPGQLA 379

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAK-RCITVSSATGRL 180
           ALINDSAG+IATNTAA+QLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L
Sbjct: 380 ALINDSAGVIATNTAAIQLANARDKPCIGLFSSEEKGKLFVPYAEEKSNCVIIASKTGKL 439

Query: 181 IDIDMGTIKKAIQSFEVPLAL 201
            DID+GT+K A+Q FE  LAL
Sbjct: 440 ADIDIGTVKNAMQVFEGSLAL 460

[Close]
BLAST of CsGy7G018390 vs. Swiss-Prot
Match: sp|Q9S9N6|PNSB1_ARATH (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB1 PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 6.6e-73
Identity = 142/201 (70.65%), Postives = 165/201 (82.09%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           M DWLGRPFRSVPR P+ PL+VSI+RK+KEV+       GA  GK+IVIHGIESDSKASM
Sbjct: 260 MEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAKYRNAGAVTGKFIVIHGIESDSKASM 319

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGD DSLL +  WA+I K +RGFKPVFVIPHEKERE+VE+ VG++ SIVFITTPGQLA
Sbjct: 320 QSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEKERENVEDFVGDDTSIVFITTPGQLA 379

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAK-RCITVSSATGRL 180
           ALINDSAG+IATNTAA+QLA AR+KP I LF SEEK KLFVP AE K  C+ ++S TG+L
Sbjct: 380 ALINDSAGVIATNTAAIQLANARDKPCIGLFSSEEKGKLFVPYAEEKSNCVIIASKTGKL 439

Query: 181 IDIDMGTIKKAIQSFEVPLAL 201
            DID+GT+K A+Q FE  LAL
Sbjct: 440 ADIDIGTVKNAMQVFEGSLAL 460

[Close]
BLAST of CsGy7G018390 vs. TrEMBL
Match: tr|A0A0A0K6S9|A0A0A0K6S9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431990 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 5.0e-102
Identity = 196/203 (96.55%), Postives = 196/203 (96.55%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI       GAEKGKYIVIHGIESDSKASM
Sbjct: 264 MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYRKAGAEKGKYIVIHGIESDSKASM 323

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA
Sbjct: 324 QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 383

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI
Sbjct: 384 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 443

Query: 181 DIDMGTIKKAIQSFEVPLALAFQ 204
           DIDMGTIKKAIQSFEVPLALAFQ
Sbjct: 444 DIDMGTIKKAIQSFEVPLALAFQ 466

[Close]
BLAST of CsGy7G018390 vs. TrEMBL
Match: tr|A0A1S3CEK1|A0A1S3CEK1_CUCME (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499839 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.2e-98
Identity = 190/203 (93.60%), Postives = 192/203 (94.58%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI       G EKGKYIVIHGIESDSKASM
Sbjct: 264 MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIAEKYKKAGVEKGKYIVIHGIESDSKASM 323

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QSKGDTDSLLPIRAWAEIA CIRGFKPVFVIP EKERE+VEEEVGNNASIVFITTPGQLA
Sbjct: 324 QSKGDTDSLLPIRAWAEIANCIRGFKPVFVIPREKERENVEEEVGNNASIVFITTPGQLA 383

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVP+AEAKRCITVSS TGRLI
Sbjct: 384 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPDAEAKRCITVSSTTGRLI 443

Query: 181 DIDMGTIKKAIQSFEVPLALAFQ 204
           DIDMGTIKKAIQSFEVPLALAFQ
Sbjct: 444 DIDMGTIKKAIQSFEVPLALAFQ 466

[Close]
BLAST of CsGy7G018390 vs. TrEMBL
Match: tr|A0A2P4N2X5|A0A2P4N2X5_QUESU (Photosynthetic ndh subunit of subcomplex b 1, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_06232 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.9e-81
Identity = 155/201 (77.11%), Postives = 176/201 (87.56%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           M+DWLGRPFRSVPR  VPPL+VSI+RKLKEV+       GAEKG+YIVIHGIESDSKASM
Sbjct: 267 MLDWLGRPFRSVPRQVVPPLRVSISRKLKEVVEAKYKNAGAEKGRYIVIHGIESDSKASM 326

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QS+GDTDSLLPI  W EIA+ +RGF+PVFVIPH+K RE VEE VGN+ASIVF+TTPGQLA
Sbjct: 327 QSRGDTDSLLPIEVWDEIAEAVRGFRPVFVIPHDKVREDVEEVVGNDASIVFVTTPGQLA 386

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAG+IATNTAA+QLA AREKPSIALFCSEEK KLFVPNAE K+C+ VSS TG+LI
Sbjct: 387 ALINDSAGVIATNTAAIQLANAREKPSIALFCSEEKGKLFVPNAEEKKCVIVSSKTGKLI 446

Query: 181 DIDMGTIKKAIQSFEVPLALA 202
           DID+  +K+AIQ F+V LALA
Sbjct: 447 DIDIEAVKRAIQIFDVSLALA 467

[Close]
BLAST of CsGy7G018390 vs. TrEMBL
Match: tr|A0A2P5VWY4|A0A2P5VWY4_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA37361 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.4e-80
Identity = 155/200 (77.50%), Postives = 175/200 (87.50%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           MVDWLGRPFRSVPRH V PL+VSI+RKLKEV+       G EKGKYIVIHGIESDSKASM
Sbjct: 63  MVDWLGRPFRSVPRHEVGPLRVSISRKLKEVVAEKYRNAGVEKGKYIVIHGIESDSKASM 122

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QS+GDTD LLPI+ WAEIA+ IRGFKP+FVIPHEKERE+VEEEVG++A+IVFITTPGQLA
Sbjct: 123 QSRGDTDCLLPIQVWAEIAEDIRGFKPLFVIPHEKERENVEEEVGDDANIVFITTPGQLA 182

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAG+IATNTAA+QLA AREKPSI LFCSEEK KLFVPNAE K+C  VSS TG+LI
Sbjct: 183 ALINDSAGVIATNTAAIQLATAREKPSIGLFCSEEKGKLFVPNAEEKKCAVVSSKTGKLI 242

Query: 181 DIDMGTIKKAIQSFEVPLAL 201
           DID+  +K+A+Q F+  LAL
Sbjct: 243 DIDVEAVKQAMQIFQQSLAL 262

[Close]
BLAST of CsGy7G018390 vs. TrEMBL
Match: tr|A0A0D2TP71|A0A0D2TP71_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G123800 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.9e-80
Identity = 155/200 (77.50%), Postives = 175/200 (87.50%), Query Frame = 0 

Query: 1   MVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIXXXXXXXGAEKGKYIVIHGIESDSKASM 60
           MVDWLGRPFRSVPRH V PL+VSI+RKLKEV+       G EKGKYIVIHGIESDSKASM
Sbjct: 264 MVDWLGRPFRSVPRHEVGPLRVSISRKLKEVVAEKYRNAGVEKGKYIVIHGIESDSKASM 323

Query: 61  QSKGDTDSLLPIRAWAEIAKCIRGFKPVFVIPHEKERESVEEEVGNNASIVFITTPGQLA 120
           QS+GDTD LLPI+ WAEIA+ IRGFKP+FVIPHEKERE+VEEEVG++A+IVFITTPGQLA
Sbjct: 324 QSRGDTDCLLPIQIWAEIAEDIRGFKPLFVIPHEKERENVEEEVGDDANIVFITTPGQLA 383

Query: 121 ALINDSAGLIATNTAAVQLAIAREKPSIALFCSEEKAKLFVPNAEAKRCITVSSATGRLI 180
           ALINDSAG+IATNTAA+QLA AREKPSI LFCSEEK KLFVPNAE K+C  VSS TG+LI
Sbjct: 384 ALINDSAGVIATNTAAIQLATAREKPSIGLFCSEEKGKLFVPNAEEKKCAVVSSKTGKLI 443

Query: 181 DIDMGTIKKAIQSFEVPLAL 201
           DID+  +K+A+Q F+  LAL
Sbjct: 444 DIDVEAVKQAMQIFQQSLAL 463

The following BLAST results are available for this feature:
BLAST of CsGy7G018390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136098.17.6e-10296.55PREDICTED: photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucumis ... [more]
XP_008461180.11.8e-9893.60PREDICTED: photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucumis ... [more]
XP_022953552.12.4e-9588.67photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata][more]
XP_022992479.13.1e-9588.67photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima][more]
XP_023548446.15.8e-9488.18photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita pepo subs... [more]
BLAST of CsGy7G018390 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G15980.13.7e-7470.65NDH-dependent cyclic electron flow 1[more]
BLAST of CsGy7G018390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9S9N6|PNSB1_ARATH6.6e-7370.65Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thali... [more]
BLAST of CsGy7G018390 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K6S9|A0A0A0K6S9_CUCSA5.0e-10296.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431990 PE=4 SV=1[more]
tr|A0A1S3CEK1|A0A1S3CEK1_CUCME1.2e-9893.60photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3... [more]
tr|A0A2P4N2X5|A0A2P4N2X5_QUESU2.9e-8177.11Photosynthetic ndh subunit of subcomplex b 1, chloroplastic OS=Quercus suber OX=... [more]
tr|A0A2P5VWY4|A0A2P5VWY4_GOSBA1.4e-8077.50Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA37361 PE=4 SV... [more]
tr|A0A0D2TP71|A0A0D2TP71_GOSRA1.9e-8077.50Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G123800 PE=4 ... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G018390.1CsGy7G018390.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.2000coord: 33..197
e-value: 1.4E-8
score: 36.2
NoneNo IPR availablePANTHERPTHR37698FAMILY NOT NAMEDcoord: 1..201
NoneNo IPR availableSUPERFAMILYSSF53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 14..193

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy7G018390Cla015322Watermelon (97103) v1cgybwmB528
CsGy7G018390Csa7G431990Cucumber (Chinese Long) v2cgybcuB323
CsGy7G018390MELO3C023468Melon (DHL92) v3.5.1cgybmeB457
CsGy7G018390ClCG09G003340Watermelon (Charleston Gray)cgybwcgB484
CsGy7G018390CSPI07G20110Wild cucumber (PI 183967)cgybcpiB331
CsGy7G018390CmaCh17G008970Cucurbita maxima (Rimu)cgybcmaB925
CsGy7G018390CmoCh17G008660Cucurbita moschata (Rifu)cgybcmoB909
CsGy7G018390MELO3C023468.2Melon (DHL92) v3.6.1cgybmedB455
CsGy7G018390CsaV3_7G031890Cucumber (Chinese Long) v3cgybcucB347
CsGy7G018390Cla97C09G165570Watermelon (97103) v2cgybwmbB541
CsGy7G018390Bhi09G000434Wax gourdcgybwgoB673
CsGy7G018390Carg18735Silver-seed gourdcarcgybB0366
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy7G018390Watermelon (97103) v2cgybwmbB490
CsGy7G018390Cucumber (Gy14) v2cgybcgybB113
CsGy7G018390Cucumber (Gy14) v2cgybcgybB135
CsGy7G018390Cucurbita maxima (Rimu)cgybcmaB911
CsGy7G018390Cucurbita maxima (Rimu)cgybcmaB938
CsGy7G018390Cucurbita maxima (Rimu)cgybcmaB973
CsGy7G018390Cucurbita moschata (Rifu)cgybcmoB893
CsGy7G018390Cucurbita moschata (Rifu)cgybcmoB921
CsGy7G018390Cucurbita moschata (Rifu)cgybcmoB955
CsGy7G018390Cucurbita pepo (Zucchini)cgybcpeB906
CsGy7G018390Cucurbita pepo (Zucchini)cgybcpeB931
CsGy7G018390Cucurbita pepo (Zucchini)cgybcpeB946
CsGy7G018390Cucumber (Chinese Long) v2cgybcuB305
CsGy7G018390Cucumber (Chinese Long) v2cgybcuB315
CsGy7G018390Bottle gourd (USVL1VR-Ls)cgyblsiB472
CsGy7G018390Bottle gourd (USVL1VR-Ls)cgyblsiB483
CsGy7G018390Melon (DHL92) v3.5.1cgybmeB503
CsGy7G018390Melon (DHL92) v3.6.1cgybmedB499
CsGy7G018390Watermelon (Charleston Gray)cgybwcgB492
CsGy7G018390Watermelon (Charleston Gray)cgybwcgB516
CsGy7G018390Watermelon (97103) v1cgybwmB537
CsGy7G018390Watermelon (97103) v1cgybwmB550
CsGy7G018390Wild cucumber (PI 183967)cgybcpiB313
CsGy7G018390Wild cucumber (PI 183967)cgybcpiB321
CsGy7G018390Silver-seed gourdcarcgybB0461