CsGy7G006110 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexonpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACACCATTTTTATTGTACTTTTAAGCATTTTTATACTTACTCGATATAATTATGCATTTCAAAATTTAAAATTCAAGTTTTGGTCGTAATCAAAATGAATTTGCGTTCGATTTAACAAAATGAAAAAGTTGTGAAAGCTAATAATTTTTTATTTAACATTTCTTTTCATCGTCTTTTCCTTCTTTTTTTCATCGATTTTTATTTAACGATGAAATCTATACAAACAAAATTTGAATAAATATTAAAAGACTCCTAAAAAATATATATATTTTGTATATATTTGAATAAAAGTTTATAATTTTAATTTATATTACTCAAAAGAATAAAAATTGGGATATAAATATATATTTGAATAAAAAGCAATTTTTTTAAAGAAAACCTAATAGAGTAGTTTGGCCTCCGGCCGTCGTCTCCGGCAAATCTTCCGTGTCCGCCGGTTGCAGCAATACCGGCGAGTGGGTTACTGTTGTCATCTCTCTCTCTCTCTATATATATATATATCGGCACTCGCACTGTCTCTCAGTTACTCTACTGCACAGCCTCCAGTCTATCGCCGCCGTCATTGCACGTCTGCGAAGGGTCGTCGCCGGTTTGGTATTTGTACGGTGAGTAAGATTATGGGTTCCTTCTAATTTTCTGTCTTAATTGATCTTGAATACAATTAAGTGTTTAGCTTGAAATTTATTTACCCATGATGCTTTGGTCTTAGAAAGTTGAATGAAGTTGTTGGACTTTATGAAATGAATTAATGTTCAAACCCAAATGTAAGGTAGAGTGGTGAGAATAAATTAGATTTAGAACTTTTGGATTTTGAGTTATCTAACATCTCTACGTTAATTTGCTTGCAGAATTGAAATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGGTAACTTTAGTCCCACTGGTTTGATAAGATAGCATGAACTAAGAGAGTCTGCTGCCATTTTCTCAATTGCTTTTAAATGAAACAAAATTGTCAACTCCCTACTCGTTTGTATATTGGATGGTTTAGATTTCTTTCGTATTACTCAAACTTACGTCTTATTTTGTTCCTCTTGATCAGAATTAAATGTTTGATATCATTAATTTTCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGGTTTGTGTCCTGCATCTGAAATAATACTTGTCTTTGCTTCTACTGTTTTGATGAAGTGTTGGTGTAGTGATTTGTTTTAACCATTGCAGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGCAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAAGTACAAAGAAGTGTATGTTTTACTTTTAAGTGAGCAAGTTGTTAATTCAATGCCTGCTTCGGTGAAGCCATTATCTTTATTTTCTTCTTTTGCGGTCTAACTACAATTTTTTCTCTTCACATACATAGTGCATACATGTCGGGTTGGACTGGATGATCATTTGAAAAAAGGTAAATAATATTTCTCTATCAAGATTGAAACCGTTTGCTATTTCGTAACAATACCCTCACACATTTGCTCGTCAATTTCGATACGCCTTGCACAACTTTTGTGTATATTTTGTCCCGTGTTCTCTGCCACATTCTTTTCCTCTTTGCTGTTAACAAGATTTACTCTCATTGAAAGATATTTTTTCATAATGATATCTAATTAATTCATGGGAACAAATAGCAAGGAGCCTAATCGACGAACTTGAGCGCCTGCATAATGATGTTAATATTGAACTGGAAACTGAAAACCCCCTGTGCAATTCAACAATGTCAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGGTAAACTGCAACTTCCATTTTCTTTATGTTTCTTGTAATGGTTACTTTGAATTTTTGTCTATTGTTAGTTAGATGTTGAAGTTGTCGAGTTGGTTTACTGTTTAATCAATTTCCGCGTTTTCTTCTTCAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGTAATAGTCTTCCATTTTTTGTTACCTTTCCACATGAACATAACATGCTATCGTTTTGAAACACCCACCTGCTGGCATAGTGTCTAGAGCGTACGTTTAGTTACAGTGATGGGAGTTCAATCCTACAATCCATAGTTTGTTGTTAATTTAATAAAAATGTCGTCAAAACTGAAACTTGCTGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGATGAGTTGCCATTGCTGCAGTTAATCTTTTAAGCCAAAGTTCGGAGTTTCCTTTTGGATCAAAGTCATCTCCGGGAGCATTAAATTTTATGAGTGAATATTCCATGTAAACGTATTTGAAGGCATCCGATGTAAGTTCAATGTTCTGTATTTTTGAAACCATGTCAGATTTTGTAAATTTATGTGAAATGAATATCAATTATTATAATGTTTCAATGCAAGGTTTATGTATTAAATTAGTACTATGATTTAAATATTAATACCTTATAAATACTGCCCACCAGTAGTGAGTGTAAATTTTTTTATATTCTGTA ATGACACCATTTTTATTAAAACCTAATAGAGTAGTTTGGCCTCCGGCCGTCGTCTCCGGCAAATCTTCCGTGTCCGCCGGTTGCAGCAATACCGGCGAGTGGTCTATCGCCGCCGTCATTGCACGTCTGCGAAGGGTCGTCGCCGGTTTGGTATTTGTACGAATTGAAATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGCAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAACAAGGAGCCTAATCGACGAACTTGAGCGCCTGCATAATGATGTTAATATTGAACTGGAAACTGAAAACCCCCTGTGCAATTCAACAATGTCAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGATGAGTTGCCATTGCTGCAGTTAATCTTTTAAGCCAAAGTTCGGAGTTTCCTTTTGGATCAAAGTCATCTCCGGGAGCATTAAATTTTATGAGTGAATATTCCATGTAAACGTATTTGAAGGCATCCGATGTAAGTTCAATGTTCTGTATTTTTGAAACCATGTCAGATTTTGTAAATTTATGTGAAATGAATATCAATTATTATAATGTTTCAATGCAAGGTTTATGTATTAAATTAGTACTATGATTTAAATATTAATACCTTATAAATACTGCCCACCAGTAGTGAGTGTAAATTTTTTTATATTCTGTA ATGACACCATTTTTATTAAAACCTAATAGAGTAGTTTGGCCTCCGGCCGTCGTCTCCGGCAAATCTTCCGTGTCCGCCGGTTGCAGCAATACCGGCGAGTGGTCTATCGCCGCCGTCATTGCACGTCTGCGAAGGGTCGTCGCCGGTTTGGTATTTGTACGAATTGAAATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGCAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAACAAGGAGCCTAATCGACGAACTTGAGCGCCTGCATAATGATGTTAATATTGAACTGGAAACTGAAAACCCCCTGTGCAATTCAACAATGTCAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGA MTPFLLKPNRVVWPPAVVSGKSSVSAGCSNTGEWSIAAVIARLRRVVAGLVFVRIEMEEVQFDHESKEKIFQIFKEFMASVAKLDELGTLGSQLLSGLRQGLELLRRPSINGTSKLIENVIEMSNTQNLRSYIEAGCINTHDGAQTRSLIDELERLHNDVNIELETENPLCNSTMSDEDLELDEEEATVPSKKPDANDYAVLMGIVKVMIKKNHIMQEKIISGLSLKSSSGELETYCLMWSLQPYIDDEIMRWAWKLV
BLAST of CsGy7G006110 vs. NCBI nr
Match: XP_004136915.2 (PREDICTED: uncharacterized protein LOC101209598 [Cucumis sativus] >XP_011658847.1 PREDICTED: uncharacterized protein LOC101209598 [Cucumis sativus] >KGN43815.1 hypothetical protein Csa_7G069170 [Cucumis sativus]) HSP 1 Score: 380.6 bits (976), Expect = 4.3e-102 Identity = 200/220 (90.91%), Postives = 202/220 (91.82%), Query Frame = 0
BLAST of CsGy7G006110 vs. NCBI nr
Match: XP_008455091.1 (PREDICTED: uncharacterized protein LOC103495347 isoform X3 [Cucumis melo]) HSP 1 Score: 358.6 bits (919), Expect = 1.8e-95 Identity = 189/220 (85.91%), Postives = 196/220 (89.09%), Query Frame = 0
BLAST of CsGy7G006110 vs. NCBI nr
Match: XP_016901720.1 (PREDICTED: uncharacterized protein LOC103495347 isoform X2 [Cucumis melo]) HSP 1 Score: 352.1 bits (902), Expect = 1.7e-93 Identity = 189/226 (83.63%), Postives = 196/226 (86.73%), Query Frame = 0
BLAST of CsGy7G006110 vs. NCBI nr
Match: XP_008455090.1 (PREDICTED: uncharacterized protein LOC103495347 isoform X1 [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 5.9e-91 Identity = 189/248 (76.21%), Postives = 196/248 (79.03%), Query Frame = 0
BLAST of CsGy7G006110 vs. NCBI nr
Match: XP_022150735.1 (uncharacterized protein LOC111018794 [Momordica charantia]) HSP 1 Score: 294.7 bits (753), Expect = 3.1e-76 Identity = 156/220 (70.91%), Postives = 181/220 (82.27%), Query Frame = 0
BLAST of CsGy7G006110 vs. TAIR10
Match: AT3G49645.1 (unknown protein) HSP 1 Score: 166.0 bits (419), Expect = 3.0e-41 Identity = 93/214 (43.46%), Postives = 139/214 (64.95%), Query Frame = 0
BLAST of CsGy7G006110 vs. TrEMBL
Match: tr|A0A0A0K2B6|A0A0A0K2B6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069170 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 2.9e-102 Identity = 200/220 (90.91%), Postives = 202/220 (91.82%), Query Frame = 0
BLAST of CsGy7G006110 vs. TrEMBL
Match: tr|A0A1S3C0U3|A0A1S3C0U3_CUCME (uncharacterized protein LOC103495347 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495347 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 1.2e-95 Identity = 189/220 (85.91%), Postives = 196/220 (89.09%), Query Frame = 0
BLAST of CsGy7G006110 vs. TrEMBL
Match: tr|A0A1S4E157|A0A1S4E157_CUCME (uncharacterized protein LOC103495347 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495347 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.1e-93 Identity = 189/226 (83.63%), Postives = 196/226 (86.73%), Query Frame = 0
BLAST of CsGy7G006110 vs. TrEMBL
Match: tr|A0A1S3C033|A0A1S3C033_CUCME (uncharacterized protein LOC103495347 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495347 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 3.9e-91 Identity = 189/248 (76.21%), Postives = 196/248 (79.03%), Query Frame = 0
BLAST of CsGy7G006110 vs. TrEMBL
Match: tr|A0A1R3GE56|A0A1R3GE56_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_26606 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 7.2e-45 Identity = 101/219 (46.12%), Postives = 151/219 (68.95%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |