CSPI07G06480 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTTTTTAAGAAAACCTAATAGAGTAGTTTGGCCTCCGGCCGTCGTCTCCGGCAAATCTTCCGTGTCCGCCGGTTGCAGCAATACCGGCGAGTGGGTTACTGTTGTCATCTCTCTCTCTCTATATATATATCGGCACTCGCACTGTCTCTCAGTTACTCTACTGCACAGCCTCCAGTCTATCGCCGCCGTCATTGCACGTCTGCGAAGGGTCGTCGCCGGTTTGGTATTTGTACGGTGAGTAAGATTATGGGTTCCTTCTAATTTTCTGTCTTAATTGATCTTGAATACAATTAAGTGTTTAGCTTGAAATTTATTTACCCATGATGCTTTGGTCTTAGAAAGTTGAATGAAGTTGTTGGACTTTATGAAATGAATTAATGTTCAAACCCAAATGTAAGGTAGAGTGGTGAGAATAAATTAGATTTAGAACTTTTGGATTTTGAGTTATCTAACATCTCTACGTTAATTTGCTTGCAGAATTGAAATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGGTAACTTTAGTCCCACTGGTTTGATAAGATAGCATGAACTAAGAGAGTCTGCTGCCATTTTCTCAATTGCTTTTAAATGAAACAAAATTGTCAACTCCCTACTCGTTTGTATATTGGATGGTTTAGAGTTCTTTCGTATTACTCAAACTTATGTCTTATTTTGTTCCTCTTGATCAGAATTAAATGTTTGATATCATTAATTTTCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGGTTTGTGTCCTGCATCTGAAATAATACTTGTCTTTGCTTCTACTGTTTTGATGAAGTGTTGGTGTAGTGATTTGTTTTAACCATTGCAGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAAGTACAAAGAAGTGTATGTTTTACTTTTAAGTGAGCAAGTTGTTAATTCAATGCCTGCTTCGGTGAAGCCATTATCTTTATTTTCTTCTTTTGCGGTCTAACTACAATCTTTTCTCTTCACATACGTAGTGCATACATGTCGGGTTGGACTGGATGATCATTTGAAAAAAGGTAAATAATATTTCTCTATCAAGATTGAAACCGTTTGCTATTTCGTAACAATACCCTCACACATTTGCTCGTCAATTTCGATATGCCTTGCACAACTTTTGTGTATATTTTGTCCCGTGTTCTCTGCCACATTCTTTTCCTCTTTGCTGTTAACAAGATTTACTCTCATTGAAAGATATTTTTTCATAATGATATCTAATTAATTCATGGGAACAAATAGCAAGGAGCCTAATCGACGAACTTGAGCGCCTGCATAATGATGTTAATATTGAACTGGAAACTGAAAACCCCCTGTGCAATTCAACAATGTCAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGGTAAACTGCAACTTCCATTTTCTTTATGTTTCTTGTAATGGTTACTTTGAATTTTTGTCTATTGTTAGTTAGATGTTGAAGTTGTCGAGTTGGTTTACTGTTTAATCAATTTCCGCGTTTTCTTGTTCAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGTAATAGTCTTCCATTTTTTGTTACCTTTCCACATGAACATAACATGCTATCGTTTTCAAACACCCACCTGCTGGCATAGTGTCTAGAGCGTAAGTTTAGTTACAGTGATGGGAGTTCAATCCTACAATCCATAGTTTGTTGTTAATTTAATAAAAATGTCGTCAAAACTGAAACTTGCTGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGATGAGTTGCCATTGCTGCAGTTAATCTTTTAAGCCAAAGTTTGGAGTTTCCTTTTGGATCAAAGTCATCTCCGGGAGCATTAAATTTTATGAGTGAATATTCCATGTAAACGTATTTGAAGGCATCCAATGTAAGTTCAATGTTCTGTATTTTTGAAACCATGTCAAATTTTGTAAATTTATGTGAAATGAATATCAATTATTATAATGTTTCAATACAAGGTTTATGTATTAAATTAGTACTATGATTTAAATATTAATACCTTATAAATACTGCCC ATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAAGTACAAAGAAGTTGCATACATGTCGGGTTGGACTGGATGATCATTTGAAAAAAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGA ATGGAAGAAGTTCAATTTGATCACGAATCAAAAGAGAAGATTTTTCAGATTTTTAAAGAGTTCATGGCTAGTGTTGCCAAGCTCGACGAATTGGGGACACTAGGAAGCCAGTTGCTATCTGGCCTTCGGCAAGGGCTTGAGCTTCTTCGACGACCTTCAATAAATGGAACATCAAAGTTGATTGAGAATGTCATTGAAATGAGTAATACGGAGAATCTTAGATCATACATTGAAGCTGGATGCATCAATACTCATGATGGCGCACAAAGTACAAAGAAGTTGCATACATGTCGGGTTGGACTGGATGATCATTTGAAAAAAGATGAAGATCTAGAATTGGATGAAGAAGAAGCAACTGTCCCTAGTAAGAAACCTGATGCTAATGATTATGCTGTATTAATGGGGATCGTCAAAGTTATGATCAAGAAAAACCACATAATGCAGGAGAAGATTATTTCGGGTTTAAGTCTCAAATCATCCTCGGGGGAACTCGAAACATATTGCCTAATGTGGTCGTTACAACCGTATATAGACGATGAAATTATGCGTTGGGCTTGGAAGCTTGTTTGA
BLAST of CSPI07G06480 vs. TrEMBL
Match: A0A0A0K2B6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G069170 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 6.6e-118 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of CSPI07G06480 vs. TrEMBL
Match: A0A061DIV6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000903 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56 Identity = 118/227 (51.98%), Postives = 166/227 (73.13%), Query Frame = 1
BLAST of CSPI07G06480 vs. TrEMBL
Match: F6HXI9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g07870 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51 Identity = 110/234 (47.01%), Postives = 162/234 (69.23%), Query Frame = 1
BLAST of CSPI07G06480 vs. TrEMBL
Match: U5FJH7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s12700g PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.3e-51 Identity = 105/223 (47.09%), Postives = 162/223 (72.65%), Query Frame = 1
BLAST of CSPI07G06480 vs. TrEMBL
Match: A0A067GJB5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026871mg PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50 Identity = 107/220 (48.64%), Postives = 154/220 (70.00%), Query Frame = 1
BLAST of CSPI07G06480 vs. TAIR10
Match: AT3G49645.1 (AT3G49645.1 unknown protein) HSP 1 Score: 198.4 bits (503), Expect = 4.7e-51 Identity = 105/214 (49.07%), Postives = 150/214 (70.09%), Query Frame = 1
BLAST of CSPI07G06480 vs. NCBI nr
Match: gi|778724692|ref|XP_004136915.2| (PREDICTED: uncharacterized protein LOC101209598 [Cucumis sativus]) HSP 1 Score: 431.4 bits (1108), Expect = 9.4e-118 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1
BLAST of CSPI07G06480 vs. NCBI nr
Match: gi|659110179|ref|XP_008455091.1| (PREDICTED: uncharacterized protein LOC103495347 isoform X2 [Cucumis melo]) HSP 1 Score: 409.5 bits (1051), Expect = 3.8e-111 Identity = 209/220 (95.00%), Postives = 214/220 (97.27%), Query Frame = 1
BLAST of CSPI07G06480 vs. NCBI nr
Match: gi|659110177|ref|XP_008455090.1| (PREDICTED: uncharacterized protein LOC103495347 isoform X1 [Cucumis melo]) HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-106 Identity = 209/248 (84.27%), Postives = 214/248 (86.29%), Query Frame = 1
BLAST of CSPI07G06480 vs. NCBI nr
Match: gi|590706283|ref|XP_007047679.1| (Uncharacterized protein TCM_000903 [Theobroma cacao]) HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56 Identity = 118/227 (51.98%), Postives = 166/227 (73.13%), Query Frame = 1
BLAST of CSPI07G06480 vs. NCBI nr
Match: gi|1009145595|ref|XP_015890421.1| (PREDICTED: uncharacterized protein LOC107425008 [Ziziphus jujuba]) HSP 1 Score: 218.4 bits (555), Expect = 1.3e-53 Identity = 117/230 (50.87%), Postives = 165/230 (71.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |