CsGy7G004420 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G004420
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	E3 ubiquitin-protein ligase RNF12 isoform X1
Location	Chr7 : 3318721 .. 3321774 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATATAGCTGACAAATGTCATGAACGGAGATGGGTGGTTAGATTGAACTTATAAACTCTTAATCCTATATCAAAGTCAAGATGTTCAAAGTTATATGAAGAGAATATAGCTGACAAATGTCATGGACGGAAGATAAGCAACGAAGGCAGAAAATGGAAAGAGATTCGTATTTTGCTTTAAAGGAAATGCACCCAAAAAACTGGACAAATTGGTACATTGAGGTTGTGGAATAAAGGTTATAGAATCACTTCAAGAGAAAATTGCCCCATCCTCAACGTTGCAGAGCCAAAGATAGCGAACTTTTCATTCGAACGTTTCTAGAAAAGATGCCTAATCTCCTAATTGATTACTACTCATCGAAACATACAGGAAGGAGAGGAAAATAGAAAGAGGTTCTGCAACTGAAACAAAGACTTGAATTTCAATTTATCTTGGGGATGCAAATATCCAACAAAGTGTAAAATCAGCAATGAAAATGAAGGTTCCACAGAATAAGATTCCTTTCCTTAATTTCAAAATGAATATTTCCCCCTATGTAAATTTATAATGGAGTGGGAATCTGACTTTAGTCGTTTACGTGAGAATAAGACAACCAGGCAAACAAAGACAGAGAAAGACAATGGCATGGACCGGTATATATTCACTCGGATTATTCATCTTCAGGTAGTGATAAGACTATTATAAAATCCCAAACACTAAAATCCAACAATTTAACATCTAAAAGGTTGAAGAAGAAGAAGAAACTTCTGAAAAATGAGCAGGCGTTCTACTAATTTTCCTCCAGGAATTTGGCAGGCCAGGAGGGAACACGATCGCCAGAGATATAACAGAAATGAATCAAACCGAACGAACTCCACACCTTCACACACTCAATCATTTCAGGTCAGCGGGTTAACGATTCTTTTGTTTTGCAACGAACTGTATTCCAATCCCACCATCAAAGCTTATGCTTTTATCCTACGACATGATTTGCAGGCCATAAAACAGAACTCGTAGATCTAGATCACATTTAAATTCCCTGTTGATAGTTCTCCTAGTTTTCATATATTAGTACTTGAGAGGTTAAAGAGATGATAACAATTGTATAGCTCATGCTCGTTCTCGTTCATGTGTTGTCAGAATTCTTACAGACAGATAGATCCAGTTCCATGGAGACCTGCTGGGGAGACAGTGATAACAAGAATATTGGACATCGGCAGGTAAACAACACAAGAGCTTAATTAGTAGTTATATTGGAACTTTTGGTGTTTTGGATTGAATTATAGGCAAACCAAAGAAGTTGGTATTGCAGATTCACTTCGCAAAATGATTTGAAATTATGAAAACTTAAGAGGCCAGGCAAAGTCTGCTGTATATTGCCTGGAAATAACATGGCCTAACATCTAACTCAGGAAGATAACTTGGCAGAGAAGCAAGAAGTTCATGACTTTCACCAGTGGAAGAATTTGGGGGAAACAAACCACAAAGTGTCAGAACTTGGAGACTGATTTGTTGGAGAATCTCTGACTTAAGGGAGTTCAACAACATTCAACATCACACAATGCATTAAGCACAAATTTGTTCAACAATAATTCATATCACAATTTGCAGGGAAATAGAAATATGGCATTGTGGCATTCTTGATTGAATTGCTTATTATAAATAGCTATAACTTTTGAGAAGAACGGATTGCAATAACTTTCAATTTTTTTCATGAGCAGCATCCAAATTTGCAATAACAAACTAAATCCCCTTTCACAATATCATTTGGTTTCAGTTTCAGAGGGAATCTACTTACATTGCCTTACATCCTGCAAGTAAATTCCATATCCTCCATACTTCGTTGATAATTCATTGACTTTTTGAGAAATTTCCAGCCGTCCAGAAGAACCGCCTGCAATAGTCAGAATCATCACACATTCAAGACCAAGACAGCTTGAGGCCAGTCCAATACCGGCGGAGCTATACTCGCCAACTCCAAGATCCGAAGGGAACTCGACGCTAACATCTGAAGAGCAAAATATGGCACTGAATAAGCTGAAGAAAAAAGTGTATGATCCTCCGAGTAACACAAGTAGGAGAATAAGTTTCTATTACAGAGAGAATAACAGAGTAAACTCCAATGAGAGGCACAACAGCAATGGTGATGAAGAAGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCAAAGGAGGAGGTGATGACGACGCCATGCAACCATATGTTTCACGAACAATGCATAGTTCCGTGGGTGAAGAGCCACGGCCAATGTCCGGTTTGCAGATTTACCTTGTTCGAACGAACAGAGCGAAGAGGATCAGCTTCTTCCAATTTCAACAACAGTGTATCAATTGCGCCGCCTAGTAGCCTAGTGGACGAGGAGCTCGTGTACTTGATACGAGCCATGGAAGAGGCCCTGATGCTACGAAATGTGGCGGAATTTTGGGGAGCATGAAGTGCCATCACGATGCTCCCCAGAAATCAACATGAAGAAAACCGTAAATTTGAAGGAATGATGAAATCTGATCACTAAAAAATTAATGTTGTGCTTTGAACATGAAATAATTCGAGGAGAGAGCTCGTTGTAACCATAAAAGCATCCTCTTGGCAATGACATTTTGGATCGATAGAGTTTCTTCTCGATCTCGCGATGATCATGAAATTCTTGGCGCCAAAACTCATATATTTCATCATGCAATTTAATCGTACTAATTTTCAAATAGTTTACAGCCAATAATTGCTTTGATTATTGATGTTTGATGCATTCATCATGTAAAGTGAATAGAAATCAAAATAGAATTTAACCTAACAAAAAATATGTAGCTTACAAGTTACAACTACTTAGTTCACAATCACATGTGTTTGGACTTGTTTCATATTGACGTGGTTAGCTTTGGATCATCCAAGGCATGCACGTCTCTTTTCAACTCTTCTTCGGTTCTCCACCAATCAATTCATAACTACGCAATCCATACACAATTACTATATTTTATTTGCATCTATTAATTTATGTTAATTAGTATTTAATCAATATTTTATAATTAATTTGCCTAATACATTCTCTTTTCG

mRNA sequence

GAATATAGCTGACAAATGTCATGAACGGAGATGGGTGGTTAGATTGAACTTATAAACTCTTAATCCTATATCAAAGTCAAGATGTTCAAAGTTATATGAAGAGAATATAGCTGACAAATGTCATGGACGGAAGATAAGCAACGAAGGCAGAAAATGGAAAGAGATTCGTATTTTGCTTTAAAGGAAATGCACCCAAAAAACTGGACAAATTGGTACATTGAGGTTGTGGAATAAAGGTTATAGAATCACTTCAAGAGAAAATTGCCCCATCCTCAACGTTGCAGAGCCAAAGATAGCGAACTTTTCATTCGAACGTTTCTAGAAAAGATGCCTAATCTCCTAATTGATTACTACTCATCGAAACATACAGGAAGGAGAGGAAAATAGAAAGAGGTTCTGCAACTGAAACAAAGACTTGAATTTCAATTTATCTTGGGGATGCAAATATCCAACAAAGTGTAAAATCAGCAATGAAAATGAAGGTTCCACAGAATAAGATTCCTTTCCTTAATTTCAAAATGAATATTTCCCCCTATGTAAATTTATAATGGAGTGGGAATCTGACTTTAGTCGTTTACGTGAGAATAAGACAACCAGGCAAACAAAGACAGAGAAAGACAATGGCATGGACCGGTATATATTCACTCGGATTATTCATCTTCAGGTAGTGATAAGACTATTATAAAATCCCAAACACTAAAATCCAACAATTTAACATCTAAAAGGTTGAAGAAGAAGAAGAAACTTCTGAAAAATGAGCAGGCGTTCTACTAATTTTCCTCCAGGAATTTGGCAGGCCAGGAGGGAACACGATCGCCAGAGATATAACAGAAATGAATCAAACCGAACGAACTCCACACCTTCACACACTCAATCATTTCAGAATTCTTACAGACAGATAGATCCAGTTCCATGGAGACCTGCTGGGGAGACAGTGATAACAAGAATATTGGACATCGGCAGCCGTCCAGAAGAACCGCCTGCAATAGTCAGAATCATCACACATTCAAGACCAAGACAGCTTGAGGCCAGTCCAATACCGGCGGAGCTATACTCGCCAACTCCAAGATCCGAAGGGAACTCGACGCTAACATCTGAAGAGCAAAATATGGCACTGAATAAGCTGAAGAAAAAAGTGTATGATCCTCCGAGTAACACAAGTAGGAGAATAAGTTTCTATTACAGAGAGAATAACAGAGTAAACTCCAATGAGAGGCACAACAGCAATGGTGATGAAGAAGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCAAAGGAGGAGGTGATGACGACGCCATGCAACCATATGTTTCACGAACAATGCATAGTTCCGTGGGTGAAGAGCCACGGCCAATGTCCGGTTTGCAGATTTACCTTGTTCGAACGAACAGAGCGAAGAGGATCAGCTTCTTCCAATTTCAACAACAGTGTATCAATTGCGCCGCCTAGTAGCCTAGTGGACGAGGAGCTCGTGTACTTGATACGAGCCATGGAAGAGGCCCTGATGCTACGAAATGTGGCGGAATTTTGGGGAGCATGAAGTGCCATCACGATGCTCCCCAGAAATCAACATGAAGAAAACCGTAAATTTGAAGGAATGATGAAATCTGATCACTAAAAAATTAATGTTGTGCTTTGAACATGAAATAATTCGAGGAGAGAGCTCGTTGTAACCATAAAAGCATCCTCTTGGCAATGACATTTTGGATCGATAGAGTTTCTTCTCGATCTCGCGATGATCATGAAATTCTTGGCGCCAAAACTCATATATTTCATCATGCAATTTAATCGTACTAATTTTCAAATAGTTTACAGCCAATAATTGCTTTGATTATTGATGTTTGATGCATTCATCATGTAAAGTGAATAGAAATCAAAATAGAATTTAACCTAACAAAAAATATGTAGCTTACAAGTTACAACTACTTAGTTCACAATCACATGTGTTTGGACTTGTTTCATATTGACGTGGTTAGCTTTGGATCATCCAAGGCATGCACGTCTCTTTTCAACTCTTCTTCGGTTCTCCACCAATCAATTCATAACTACGCAATCCATACACAATTACTATATTTTATTTGCATCTATTAATTTATGTTAATTAGTATTTAATCAATATTTTATAATTAATTTGCCTAATACATTCTCTTTTCG

Coding sequence (CDS)

ATGAGCAGGCGTTCTACTAATTTTCCTCCAGGAATTTGGCAGGCCAGGAGGGAACACGATCGCCAGAGATATAACAGAAATGAATCAAACCGAACGAACTCCACACCTTCACACACTCAATCATTTCAGAATTCTTACAGACAGATAGATCCAGTTCCATGGAGACCTGCTGGGGAGACAGTGATAACAAGAATATTGGACATCGGCAGCCGTCCAGAAGAACCGCCTGCAATAGTCAGAATCATCACACATTCAAGACCAAGACAGCTTGAGGCCAGTCCAATACCGGCGGAGCTATACTCGCCAACTCCAAGATCCGAAGGGAACTCGACGCTAACATCTGAAGAGCAAAATATGGCACTGAATAAGCTGAAGAAAAAAGTGTATGATCCTCCGAGTAACACAAGTAGGAGAATAAGTTTCTATTACAGAGAGAATAACAGAGTAAACTCCAATGAGAGGCACAACAGCAATGGTGATGAAGAAGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCAAAGGAGGAGGTGATGACGACGCCATGCAACCATATGTTTCACGAACAATGCATAGTTCCGTGGGTGAAGAGCCACGGCCAATGTCCGGTTTGCAGATTTACCTTGTTCGAACGAACAGAGCGAAGAGGATCAGCTTCTTCCAATTTCAACAACAGTGTATCAATTGCGCCGCCTAGTAGCCTAGTGGACGAGGAGCTCGTGTACTTGATACGAGCCATGGAAGAGGCCCTGATGCTACGAAATGTGGCGGAATTTTGGGGAGCATGA

Protein sequence

MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGETVITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEELVYLIRAMEEALMLRNVAEFWGA

Homology

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BLAST of CsGy7G004420 vs. NCBI nr
Match: XP_004136838.1 (PREDICTED: uncharacterized protein LOC101210416 [Cucumis sativus] >KGN43640.1 hypothetical protein Csa_7G049220 [Cucumis sativus])

HSP 1 Score: 533.5 bits (1373), Expect = 4.1e-148
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET 60
           MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET
Sbjct: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET 60

Query: 61  VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120
           VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA
Sbjct: 61  VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120

Query: 121 LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM 180
           LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM
Sbjct: 121 LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM 180

Query: 181 TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEE 240
           TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEE
Sbjct: 181 TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEE 240

Query: 241 LVYLIRAMEEALMLRNVAEFWGA 264
           LVYLIRAMEEALMLRNVAEFWGA
Sbjct: 241 LVYLIRAMEEALMLRNVAEFWGA 263

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BLAST of CsGy7G004420 vs. NCBI nr
Match: XP_008455285.1 (PREDICTED: E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo])

HSP 1 Score: 483.0 bits (1242), Expect = 6.3e-133
Identity = 242/264 (91.67%), Postives = 251/264 (95.08%), Query Frame = 0


Query: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET 60
           MSRRSTNFPPGIWQARRE+DRQRYNRNESNR NSTPSHTQSFQNSYR+IDPVPWRPAGET
Sbjct: 1   MSRRSTNFPPGIWQARREYDRQRYNRNESNRVNSTPSHTQSFQNSYREIDPVPWRPAGET 60

Query: 61  VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120
           +ITRILDIGS PEEPPAIVRIITHSRPRQ+EASPIPAELYSPTPRSEGNSTLTSEEQNMA
Sbjct: 61  MITRILDIGSLPEEPPAIVRIITHSRPRQIEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120

Query: 121 LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM 180
           LNKLKKKVYDPPSNTSRRI+FYYRENNRVN       N DEEGK CAVCLEDFQPKEEVM
Sbjct: 121 LNKLKKKVYDPPSNTSRRINFYYRENNRVNXXXXXXXNSDEEGKGCAVCLEDFQPKEEVM 180

Query: 181 TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFE-RTERRGSASSNFNNSVSIAPPSSLVDE 240
           TTPCNHMFHEQCIVPWVKS+GQCPVCRFTLFE RTERRG ASSNFNN+VSIAPPSSLVD+
Sbjct: 181 TTPCNHMFHEQCIVPWVKSNGQCPVCRFTLFERRTERRG-ASSNFNNNVSIAPPSSLVDD 240

Query: 241 ELVYLIRAMEEALMLRNVAEFWGA 264
           EL+YLIRAMEEALMLRNVAEFWGA
Sbjct: 241 ELMYLIRAMEEALMLRNVAEFWGA 263

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BLAST of CsGy7G004420 vs. NCBI nr
Match: XP_022147817.1 (E3 ubiquitin-protein ligase RNF12-like isoform X1 [Momordica charantia])

HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104
Identity = 196/263 (74.52%), Postives = 221/263 (84.03%), Query Frame = 0


Query: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET 60
           MSRRSTNFPPGIWQARRE+ RQR+N N S+  NSTP H+ SFQNSY + DP PWRPAGE 
Sbjct: 1   MSRRSTNFPPGIWQARREYGRQRHNINYSDHVNSTPPHSHSFQNSYIERDPFPWRPAGEA 60

Query: 61  VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120
           +  RILDIGS PEE P IVRIITHSRP QLE+SP PAELY+PTPRS+GNSTLTSEEQNMA
Sbjct: 61  MFARILDIGSPPEETPTIVRIITHSRPGQLESSPRPAELYTPTPRSQGNSTLTSEEQNMA 120

Query: 121 LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM 180
           LNKLKKK+YDPP N  +RI+FYYREN +    ER N   DE+GKRC+VCLEDFQP+EEVM
Sbjct: 121 LNKLKKKIYDPPKNLGKRINFYYRENYK----ERSNGESDEDGKRCSVCLEDFQPREEVM 180

Query: 181 TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEE 240
           TTPCNHMFHE+CIVPWVKS+GQCPVCRF LFERT RR +ASSN N + S    ++L D+E
Sbjct: 181 TTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTGRR-AASSN-NATASNVLTNNLPDDE 240

Query: 241 LVYLIRAMEEALMLRNVAEFWGA 264
           +VYLIRAMEEALMLRN+A FWGA
Sbjct: 241 IVYLIRAMEEALMLRNLAGFWGA 257

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BLAST of CsGy7G004420 vs. NCBI nr
Match: XP_023529368.1 (E3 ubiquitin-protein ligase EL5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 197/284 (69.37%), Postives = 222/284 (78.17%), Query Frame = 0


Query: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPA--- 60
           MSRRSTNFPPG+W+ARRE+D QRYN N+SNR +ST  H Q FQNS R  +P+P RP    
Sbjct: 1   MSRRSTNFPPGLWRARREYDHQRYNTNDSNRMSSTSPHPQPFQNSSRDTNPIPLRPTGGX 60

Query: 61  -------------------GETVITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAE 120
                              G  +I R+L+I  + E+PPAIVRIITHSRPRQ+EAS  PAE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120

Query: 121 LYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSN 180
           +Y PTPRSEGNSTLTSEEQNMALNKLKKKVYDPP+N SRRISFYYRENNR N NER N  
Sbjct: 121 MYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRKNYNERSNGE 180

Query: 181 GDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRG 240
            DE+GKRCAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKSHGQCP CRFTLFERT RR 
Sbjct: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240

Query: 241 SASSNFNNSVSIAPPSSLVDEELVYLIRAMEEALMLRNVAEFWG 263
           ++S   NN+ SIA  S+LVD+ELVYLIRAME++LMLRN+   WG
Sbjct: 241 ASS---NNTASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWG 281

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BLAST of CsGy7G004420 vs. NCBI nr
Match: XP_022930836.1 (E3 ubiquitin-protein ligase EL5 [Cucurbita moschata])

HSP 1 Score: 383.3 bits (983), Expect = 6.8e-103
Identity = 197/284 (69.37%), Postives = 221/284 (77.82%), Query Frame = 0


Query: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPA--- 60
           MSRR TNFPPG+W+ARRE+D QRYN N+SNR +ST  H Q FQNS R  +P+P RP    
Sbjct: 1   MSRRPTNFPPGLWRARREYDHQRYNTNDSNRMSSTSPHPQPFQNSSRDTNPIPSRPTGGX 60

Query: 61  -------------------GETVITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAE 120
                              G  +I R+L+I  + E+PPAIVRIITHSRPRQ+EAS  PAE
Sbjct: 61  XXXXXXXXXXXXXXXXXXXGGAMIARLLEIVGQLEDPPAIVRIITHSRPRQIEASSRPAE 120

Query: 121 LYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSN 180
           LY PTPRSEGNSTLTSEEQNMALNKLKKKVYDPP+N SRRISFYYRENNR N NER N  
Sbjct: 121 LYRPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPNNASRRISFYYRENNRRNYNERSNGE 180

Query: 181 GDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRG 240
            DE+GKRCAVCLEDFQPKEEVMTTPCNHMFHE+CIVPWVKSHGQCP CRFTLFERT RR 
Sbjct: 181 NDEDGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSHGQCPNCRFTLFERTVRRE 240

Query: 241 SASSNFNNSVSIAPPSSLVDEELVYLIRAMEEALMLRNVAEFWG 263
           ++S   NN+ SIA  S+LVD+ELVYLIRAME++LMLRN+   WG
Sbjct: 241 ASS---NNAASIASGSNLVDDELVYLIRAMEDSLMLRNLTGLWG 281

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BLAST of CsGy7G004420 vs. TAIR10
Match: AT3G58720.2 (RING/U-box superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 5.3e-33
Identity = 75/182 (41.21%), Postives = 106/182 (58.24%), Query Frame = 0


Query: 79  VRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMALNKLKKKVYD--PPSNTS 138
           +R   + R + LEA        S  P S   S+  + E++  L  L K+ Y+  P S   
Sbjct: 81  IRNSNNLRRQHLEALRQAVHNQSTRPESSSRSSSQTNEEDEILKHLTKETYNPVPKSTLL 140

Query: 139 RRISFYYRENNRVNSNERHNSN--GDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIV 198
           R +S YYR  N  + + R+  N  G+E+ KRC+VCLEDF+PKE VM TPC HMFHE+CIV
Sbjct: 141 RSLSLYYRNKNPGSESSRNTQNLSGEEDDKRCSVCLEDFEPKETVMLTPCKHMFHEECIV 200

Query: 199 PWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEELVYLIRAMEEALML 257
           PW+K+ GQCPVCRF + + T++  S  +N +N       + L   EL+ ++RAMEE  + 
Sbjct: 201 PWLKTKGQCPVCRFVILKPTKQDSSPPANGSNLTGDMTTNDLFTLELLSVVRAMEETFLF 260

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BLAST of CsGy7G004420 vs. TAIR10
Match: AT2G44330.1 (RING/U-box superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-12
Identity = 25/63 (39.68%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 148 RVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCR 207
           +++S+   +++ D+    CA+C EDF   E     PCNH++H  CI+PW+ SH  CP+CR
Sbjct: 78  KISSSMLSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCR 137

Query: 208 FTL 211
             L
Sbjct: 138 VEL 140

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BLAST of CsGy7G004420 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-12
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 162 EGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTL 211
           E  +CAVC+++F+   +V   PC H+FH+ C++PW++ H  CPVCRF L
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

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BLAST of CsGy7G004420 vs. TAIR10
Match: AT5G56340.1 (RING/U-box superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 4.0e-12
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 162 EGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTL 211
           E  +C+VCL+DF+   E    PC H FH +CIVPW++ H  CPVCRF L
Sbjct: 255 EPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 303

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BLAST of CsGy7G004420 vs. TAIR10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein)

HSP 1 Score: 68.9 bits (167), Expect = 5.2e-12
Identity = 27/60 (45.00%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 166 CAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFN 225
           CAVC E F+ + E    PC H+FH+ CIVPW+     CPVCRF L     RR + +   N
Sbjct: 199 CAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNNNEEDN 258

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BLAST of CsGy7G004420 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.2e-11
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 157 SNGDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTL------ 216
           SN + E  +CAVC++DF+   E    PC H++H+ C++PW++ H  CPVCR  L      
Sbjct: 215 SNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPD 274

Query: 217 FERTERRGSASSNFNN 227
           +ER  R    +S  N+
Sbjct: 275 YERRVRGAQGTSGGND 290

[Close]

BLAST of CsGy7G004420 vs. Swiss-Prot
Match: sp|Q91YL2|RN126_MOUSE (E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.5e-11
Identity = 26/48 (54.17%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 163 GKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTL 211
           G  C VC ED+   E V   PCNH+FH+ CIVPW++ H  CPVCR +L
Sbjct: 228 GLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275

[Close]

BLAST of CsGy7G004420 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.1e-11
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 162 EGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTL 211
           E  +CAVC+++F+   +V   PC H+FH+ C++PW++ H  CPVCRF L
Sbjct: 212 EMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of CsGy7G004420 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.3e-11
Identity = 27/60 (45.00%), Postives = 34/60 (56.67%), Query Frame = 0


Query: 166 CAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFN 225
           CAVC E F+ + E    PC H+FH+ CIVPW+     CPVCRF L     RR + +   N
Sbjct: 199 CAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNNNEEDN 258

[Close]

BLAST of CsGy7G004420 vs. Swiss-Prot
Match: sp|Q6IRP0|R126B_XENLA (E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-10
Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 163 GKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTL 211
           G  C VC ED+   E V   PCNH+FH  CI+PW++ H  CPVCR +L
Sbjct: 225 GLECPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272

[Close]

BLAST of CsGy7G004420 vs. TrEMBL
Match: tr|A0A0A0K1V1|A0A0A0K1V1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049220 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 2.7e-148
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET 60
           MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET
Sbjct: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET 60

Query: 61  VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120
           VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA
Sbjct: 61  VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120

Query: 121 LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM 180
           LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM
Sbjct: 121 LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM 180

Query: 181 TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEE 240
           TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEE
Sbjct: 181 TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEE 240

Query: 241 LVYLIRAMEEALMLRNVAEFWGA 264
           LVYLIRAMEEALMLRNVAEFWGA
Sbjct: 241 LVYLIRAMEEALMLRNVAEFWGA 263

[Close]

BLAST of CsGy7G004420 vs. TrEMBL
Match: tr|A0A1S3C054|A0A1S3C054_CUCME (E3 ubiquitin-protein ligase RNF12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495488 PE=4 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 4.2e-133
Identity = 242/264 (91.67%), Postives = 251/264 (95.08%), Query Frame = 0


Query: 1   MSRRSTNFPPGIWQARREHDRQRYNRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGET 60
           MSRRSTNFPPGIWQARRE+DRQRYNRNESNR NSTPSHTQSFQNSYR+IDPVPWRPAGET
Sbjct: 1   MSRRSTNFPPGIWQARREYDRQRYNRNESNRVNSTPSHTQSFQNSYREIDPVPWRPAGET 60

Query: 61  VITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120
           +ITRILDIGS PEEPPAIVRIITHSRPRQ+EASPIPAELYSPTPRSEGNSTLTSEEQNMA
Sbjct: 61  MITRILDIGSLPEEPPAIVRIITHSRPRQIEASPIPAELYSPTPRSEGNSTLTSEEQNMA 120

Query: 121 LNKLKKKVYDPPSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVM 180
           LNKLKKKVYDPPSNTSRRI+FYYRENNRVN       N DEEGK CAVCLEDFQPKEEVM
Sbjct: 121 LNKLKKKVYDPPSNTSRRINFYYRENNRVNXXXXXXXNSDEEGKGCAVCLEDFQPKEEVM 180

Query: 181 TTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFE-RTERRGSASSNFNNSVSIAPPSSLVDE 240
           TTPCNHMFHEQCIVPWVKS+GQCPVCRFTLFE RTERRG ASSNFNN+VSIAPPSSLVD+
Sbjct: 181 TTPCNHMFHEQCIVPWVKSNGQCPVCRFTLFERRTERRG-ASSNFNNNVSIAPPSSLVDD 240

Query: 241 ELVYLIRAMEEALMLRNVAEFWGA 264
           EL+YLIRAMEEALMLRNVAEFWGA
Sbjct: 241 ELMYLIRAMEEALMLRNVAEFWGA 263

[Close]

BLAST of CsGy7G004420 vs. TrEMBL
Match: tr|A0A1S3C0K4|A0A1S3C0K4_CUCME (E3 ubiquitin-protein ligase RNF12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495488 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.6e-92
Identity = 185/241 (76.76%), Postives = 201/241 (83.40%), Query Frame = 0


Query: 25  NRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGETVITRILDIGS-RPEEPPAIVRIIT 84
           N+N  +R     +  Q   + ++      W+  G+  IT+   +G   PEEPPAIVRIIT
Sbjct: 10  NKNIGHRQEDNLAEKQEVHDFHQ------WKNLGKQ-ITKCQILGDCLPEEPPAIVRIIT 69

Query: 85  HSRPRQLEASPIPAELYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRISFYY 144
           HSRPRQ+EASPIPAELYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRI+FYY
Sbjct: 70  HSRPRQIEASPIPAELYSPTPRSEGNSTLTSEEQNMALNKLKKKVYDPPSNTSRRINFYY 129

Query: 145 RENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQC 204
           RENNRVN       N DEEGK CAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKS+GQC
Sbjct: 130 RENNRVNXXXXXXXNSDEEGKGCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSNGQC 189

Query: 205 PVCRFTLFE-RTERRGSASSNFNNSVSIAPPSSLVDEELVYLIRAMEEALMLRNVAEFWG 264
           PVCRFTLFE RTERRG ASSNFNN+VSIAPPSSLVD+EL+YLIRAMEEALMLRNVAEFWG
Sbjct: 190 PVCRFTLFERRTERRG-ASSNFNNNVSIAPPSSLVDDELMYLIRAMEEALMLRNVAEFWG 242

[Close]

BLAST of CsGy7G004420 vs. TrEMBL
Match: tr|A0A061ECA4|A0A061ECA4_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_008926 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.3e-38
Identity = 111/280 (39.64%), Postives = 149/280 (53.21%), Query Frame = 0


Query: 1   MSRRSTNFPPGIWQARREHDRQRY---NRNESNRTNSTPSHTQSFQNS--YRQIDPVPWR 60
           MS  + N  P     R  HD   Y   N N+ NR      H+  FQ +    +    PW+
Sbjct: 1   MSSGANNNTPFWPTWRSGHDYGAYAPTNSNDPNRIEPIFRHSLPFQATADASRGSRDPWQ 60

Query: 61  PAGETVITRILDIGSRPEEPPAIVRIITHSRPRQLEASPIPAELYSP------------- 120
              E V TR   +   P+ P    R  T +  + +    +PA   +P             
Sbjct: 61  MPEERVTTRPFSLSGFPDLP----RTRTRTPVQIVWLDNVPARAVNPRFSGPLQRFTVQQ 120

Query: 121 -----TPRSEGNSTLTSEEQNMALNKLKKKVYDP-PSNTSRRISFYYRENNRVNSNERHN 180
                +P  + +S    +EQ+  L+KLKK++Y+P P   +RR+S YYR+ NR N      
Sbjct: 121 VQLPASPAQQEDSRSARDEQSNVLSKLKKEIYNPIPKQMTRRLSMYYRDQNRSNLYNEKE 180

Query: 181 SNGDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEQCIVPWVKSHGQCPVCRFTLFERTER 240
              DE+GKRCA+CLEDF+P+E+VM TPC+HMFHE+CIVPWVKSHGQCPVCRF L ER   
Sbjct: 181 REKDEDGKRCAICLEDFEPREQVMLTPCDHMFHEECIVPWVKSHGQCPVCRFVLSERI-- 240

Query: 241 RGSASSNFNNSVSIAPPSSLVDEELVYLIRAMEEALMLRN 257
           R +ASS  NN+ S    + L   EL+ +IRAMEEA +  N
Sbjct: 241 RQNASSISNNNASNVAATDLFAGELISIIRAMEEAFLWGN 274

[Close]

BLAST of CsGy7G004420 vs. TrEMBL
Match: tr|A0A1R3K672|A0A1R3K672_9ROSI (Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_10976 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 3.0e-38
Identity = 103/253 (40.71%), Postives = 146/253 (57.71%), Query Frame = 0


Query: 25  NRNESNRTNSTPSHTQSFQNSYRQIDPVPWRPAGETVITRILDIGSRPE--EPPAIVRII 84
           N N+SNR      H+ SFQ +       PW+   E VI R       P+     A V+I+
Sbjct: 27  NVNDSNRIEPFFRHSVSFQPTSDATRRDPWQIPEERVIRRPFSFSGFPDHRRTSAPVQIV 86

Query: 85  -------THSRPRQLE---ASPIPAELY--------SPTPRSEGNSTLTSEEQNMALNKL 144
                  T   PR +    + P+P            +PTP  + +S  T +E+N+ L+KL
Sbjct: 87  WLESVPATPPPPRVVNPRFSGPLPRYTVQQQVQVPPAPTPAQQDDSRSTQDEENIVLSKL 146

Query: 145 KKKVYDP-PSNTSRRISFYYRENNRVNSNERHNSNGDEEGKRCAVCLEDFQPKEEVMTTP 204
           K+++Y+P P   +RR++ YYR  +  N  E+     D++GKRCA+CLEDF+P+E+VM TP
Sbjct: 147 KREIYNPVPKQMTRRLNSYYRNGSSFNDKEK-----DDDGKRCAICLEDFEPREQVMLTP 206

Query: 205 CNHMFHEQCIVPWVKSHGQCPVCRFTLFERTERRGSASSNFNNSVSIAPPSSLVDEELVY 257
           C+HMFHE+CIVPW+KSHGQCPVCR+ L ER   R +A+S  NN+ S    + L   EL+ 
Sbjct: 207 CDHMFHEECIVPWMKSHGQCPVCRYVLSERI--RQTATSISNNNASNVAATDLFAGELIS 266

The following BLAST results are available for this feature:

BLAST of CsGy7G004420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136838.1	4.1e-148	100.00	PREDICTED: uncharacterized protein LOC101210416 [Cucumis sativus] >KGN43640.1 hy...	[more]
XP_008455285.1	6.3e-133	91.67	PREDICTED: E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo]	[more]
XP_022147817.1	1.6e-104	74.52	E3 ubiquitin-protein ligase RNF12-like isoform X1 [Momordica charantia]	[more]
XP_023529368.1	1.8e-103	69.37	E3 ubiquitin-protein ligase EL5 [Cucurbita pepo subsp. pepo]	[more]
XP_022930836.1	6.8e-103	69.37	E3 ubiquitin-protein ligase EL5 [Cucurbita moschata]	[more]

BLAST of CsGy7G004420 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58720.2	5.3e-33	41.21	RING/U-box superfamily protein	[more]
AT2G44330.1	4.0e-12	39.68	RING/U-box superfamily protein	[more]
AT3G19950.1	4.0e-12	46.94	RING/U-box superfamily protein	[more]
AT5G56340.1	4.0e-12	53.06	RING/U-box superfamily protein	[more]
AT5G59550.1	5.2e-12	45.00	zinc finger (C3HC4-type RING finger) family protein	[more]

BLAST of CsGy7G004420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CH30\|RING1_GOSHI	4.2e-11	38.16	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
sp\|Q91YL2\|RN126_MOUSE	5.5e-11	54.17	E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1	[more]
sp\|Q8LPN7\|RNG1L_ARATH	7.1e-11	46.94	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|Q940T5\|RDUF2_ARATH	9.3e-11	45.00	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
sp\|Q6IRP0\|R126B_XENLA	1.2e-10	52.08	E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 ...	[more]

BLAST of CsGy7G004420 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K1V1\|A0A0A0K1V1_CUCSA	2.7e-148	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049220 PE=4 SV=1	[more]
tr\|A0A1S3C054\|A0A1S3C054_CUCME	4.2e-133	91.67	E3 ubiquitin-protein ligase RNF12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|A0A1S3C0K4\|A0A1S3C0K4_CUCME	1.6e-92	76.76	E3 ubiquitin-protein ligase RNF12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|A0A061ECA4\|A0A061ECA4_THECC	2.3e-38	39.64	RING/U-box superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_00892...	[more]
tr\|A0A1R3K672\|A0A1R3K672_9ROSI	3.0e-38	40.71	Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_10976 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G004420.1	CsGy7G004420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 166..206 e-value: 5.2E-9 score: 45.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 165..207 e-value: 9.9E-14 score: 51.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 166..207 score: 13.374
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 150..223 e-value: 3.9E-21 score: 76.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	PANTHER	PTHR45515	FAMILY NOT NAMED	coord: 9..257
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 160..215

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G004420	Cla002238	Watermelon (97103) v1	cgybwmB546
CsGy7G004420	Csa7G049220	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G004420	MELO3C018712	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G004420	ClCG07G002560	Watermelon (Charleston Gray)	cgybwcgB527
CsGy7G004420	CSPI07G04880	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G004420	CmaCh11G019090	Cucurbita maxima (Rimu)	cgybcmaB896
CsGy7G004420	CmaCh19G010010	Cucurbita maxima (Rimu)	cgybcmaB950
CsGy7G004420	CmoCh11G019890	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G004420	Lsi11G017130	Bottle gourd (USVL1VR-Ls)	cgyblsiB469
CsGy7G004420	Cp4.1LG04g02740	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G004420	MELO3C018712.2	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G004420	CsaV3_7G005800	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G004420	Cla97C07G130900	Watermelon (97103) v2	cgybwmbB524
CsGy7G004420	Bhi05G001681	Wax gourd	cgybwgoB636
CsGy7G004420	Carg19150	Silver-seed gourd	carcgybB0717

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G004420	Cucumber (Chinese Long) v3	cgybcucB314
CsGy7G004420	Cucumber (Gy14) v2	cgybcgybB041
CsGy7G004420	Cucumber (Gy14) v2	cgybcgybB137
CsGy7G004420	Cucumber (Gy14) v2	cgybcgybB153
CsGy7G004420	Cucurbita maxima (Rimu)	cgybcmaB909
CsGy7G004420	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G004420	Cucurbita maxima (Rimu)	cgybcmaB955
CsGy7G004420	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G004420	Cucurbita moschata (Rifu)	cgybcmoB932
CsGy7G004420	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G004420	Cucurbita pepo (Zucchini)	cgybcpeB915
CsGy7G004420	Melon (DHL92) v3.6.1	cgybmedB454
CsGy7G004420	Watermelon (Charleston Gray)	cgybwcgB497
CsGy7G004420	Silver-seed gourd	carcgybB0865