CsGy7G004020 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G004020
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Lipoyl synthase, mitochondrial
Location	Chr7 : 3033442 .. 3041190 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAGGTAATTTTTTTTTAGAATGTTGTTATATAACTGGTTATTACTTTTTAAATTAATTTAAAATTATTACTACCCGAATTTTAAAAATTGATCTCATGGATCGAGTGAAGCCCACTTCTAAACTGGGCCACGAATATTGATCATGAGGCTCAATAATCCCTTTACGTATGGCTGAAAACGCATTACGAACGAACGCCCTTCAACTGTCCAAATCCGAAGTCACCCAAATTCCGGTTAGGCTTCTTCTCCGAGATCGACGACCACGATGAACAAGCGCTGCCAAAGCCTTGCTCGAATCCTCAAATCCGTCAGTAGATCATTCTCTTCTTCATCTTCTTCCACCTCCGCCTCTGCTACATCCTCCCAATTCCCCCGCACGTTGGCCGGTCTCCGGGAACGACTCGCCGCGGAGTCCCCAATACTTTCTGATTTCGTTGATCTGCAATCTTCTGATTCGTATTCTGTGGAGGTTGGTACGAAGAAGAAGCCCCTTCCTAAACCTAAATGGATGAGGGAATCGGTGCCTGGAGGCGAGAAGTATGTTCAGATAAAGAAGAAGCTCCGGGAATTGAAGCTTCACACGGTTTGTGAGGAGGCTAAATGCCCTAATTTAGGGGAATGCTGGTCTGGTGGAGAAACCGGCACTGCCACTGCTACAATTATGATTCTTGGTGACACTTGTACTCGTGGTTGCAGGTTAGTAGTAATTCAGTTTATTCACTCCATTTCGTTATGCTTATTTAATTGCCAATTAGCGACTGAAGAACCATGATTTCTTGTTATTTTCCCGTGTGTAATGTCAACGTATATATAATTTAGTGGGGAACGTGAATGGACTTAGAACTGATTGTTTTTGTCATAGAAAATGACCCTGTCGATTACTTTGATATCATCGGGGTGCCTCAGAATTTCTAATTCCATTGCTCTTGTGGGATTGTTTGAACTCCAGGTTCTGTAACGTGAAGACATCACGAACTCCACCTCCACCGGATCCAAATGAGCCCACAAATGTTGCTGAAGCAATTGCATCATGGGGTTTGGATTATGTGGTCATTACCAGCGTTGATCGCGACGATTTACCTGATCAAGGGAGTGGTCATTTTGCAGAGACTGTGCAGAAACTTAAGGTGTTGAAGCCAAATATGCTCATTGAGGCCTTGGGTACTAATTCCCTAGTTTCTATTACGCATAACAGTGTCTAGTTCATTGATGCATTCAAGGATCCTTGATTTAAGGAACCTTATTTTATTTGGTTTCGATGCAACTAAGAAATTTAGTGAAAGCTACTAATTTTACCCTGTACTATTGACGTCGCCAAAATCAGCATATGATATTGATTTGCTTCTGACTATGTTTGTCCAGTGTGATTTTATCTCTTCTTTGATGTTGCTTATGCTTAACTAATTGATTCTGCAGTTCCTGATTTTCGAGGAGACTCTGGCTGTGTGGAGAAAGTTGCAAGGTCGGGCCTTGACGTCTTTGCTCACAATATAGAGACAGTTGAAGAGCTTCAAGGAGTAGTTAGGGATCACCGTGCTAATTTCAAGCAATCATTAGATGTTCTAGTTATGGCCAAAGAGTTTTCTCTATCTGGAACTCTTACAAAGACTTCCATTATGTTAGGCTGTGGGGAAACACCAGATCAAGTTGTTCAAACAATGGAGAAGGTGAGAGCAGCTGGAGTTGATGTGATGACATTTGGGCAGTATATGAGACCTTCAAAACGCCACATGCCTGTATCAGAATACATTACTCCTGAGGCTTTTGAGAAGTATCAAAATATTGGCATGAAAATGGTACTTTCTCTTTCTAATTATTTGAACATTTTGATTGTATACTGGCTTCCCTGTTCTGCTAGTGAAAAATGATGATTGCTCAATCAATACCTTAAAGGCAAGTCGACTTGATTTTTTTATAAAAAAAAGTTATAATATTGTATCATTTCCCATCAGGCTAGGATGAATCAAAGTGCATAAGTTTTTCTCTAACTTAAATATCTATTTTAAGCACACTTCAAAAGTTAATCCAAACAGGTTTTATTGGATTCATTCAGTGTGAATAACTTTCATTTGCATTTTCCTTCTCTCGGATCTGTACCGTTGTAATTTTTCGTGTGTTGATTTGTTAGAGGGAGTCCATGTTTTACCTAAAGCATATACTAATTCACACTTCGATTCATAACCCTCATTTTTAAGTTTATAGGAAATCTCCATCATCAAGTAGTACTTATTATATGATCAATAGTCTTTTAATGGCTGGAGTTACCTGCCAGCCTTGAGGGTGCAACAATTATCTAAAAATCTTTTTTTTGTTTGGTTGTGGCAGGGTTTTCGATATGTGGCTTCTGGCCCAATGGTTAGGTCTTCATACAAGGCAGGAGAATTCTATATCAAGTCAATGATTGAATCAGATCGGGCAGCTTCTAATTCACAGCCTACCCAACTTTGATTATTGTTACCATTTCTATTGGTCATCTGTCCCTAACAATCCCTACAAAATTTAACAATGTTGCATGTAAGTTGGCATATAAGCAAATTGGACTTTTGATTTGATGGATTTGTCCAGTCGTTTTGTCAAATTTTTGTGCTCCTGATCCGCTGCAGATGTATTGTCACTGTAGCCATAAATTTTTGTTCTACTCCTATATAATATCTCCCCTTCATCCTGTTCTTTCTGATCAGCATAGGGGTATTACTATTCTTGTAATATCGGGATTGGAATTTTATTTATTTGCTATTTGTATAGGTTTACGTTTATACCATTTTGGTTCATACAAAAACTCAATTATTGGATTTCAATGCAAAAGCAGGTTCAACTGTGAACGAGTTGACTTAAAGGATCTGGTAATTTTCTTCTCAAGTCCTCATTCTATACGGATTGAAAAGATGTTAAGGTCATGAAAAGATGTAATGTTCTCTTATAGTGGTAAAATATTTATTTTTATAGAAGAACGTTAAAAGGAACGTCAAGTGAACATTAACATCTTTTTACGATTCCTCTGTCTTAAGCCAATCCCATGCCTCGTATTAAACACGCCATTGACAGTCAGTTTCTTCTCTATTGGTACTGGGCGTCGAGCCATTTCACTGCCAACTCTGCCAGTGTCTCGCCCAGGTGCTTTCCTTTCCCACCCAAAATTCGGTACCCTAATCGTTAATTTCAAATTTTCAAATCTTCAAATTCTAATATCTCACTTCATTTAGCTTCCATCTCCATTTCCATTTTTCACATTCACCACTCTATGGGTTGTTGCTGTAGCAGAGCCTTGGACAGGGGTCAACCTCATACCCTGGACAAGAACCATCGTTCTGCAAAGCCTTCGTCACCGGGATGGTTCGACACTGATGTCGAAAACGTTCCAGATAACAGAACCCCGGAAGAAGAAACCGTCAAAGAAGTCCTCTCAGAGACTCCCATTGCTAAGCCATGTAGTGTTCTGCAAACATCCCATAAGAAGCCACCGGAGCAGAGAGTAAAAGCAAGCGAAATGGATGGTTCGCTTGGCAAGGGAGAGGAAAGTATTGTTTCAGTTTCGGAGACGTCTCAGGTTACAGAGTGGTGCAGCAATATGAGTGAAAGCGTGTCGATGGCGACCACCATTTCGGAGCAAAGGGAAGGGGATGAAGCATCAAGTAAGAGCAGAGATATTGGTCGAAATATAAAACCAAAGATTCGCAGAAAACGGCCATGCTCCGGCAACCTATCATATCGAAGAGAACAGAGAGACAAATGTACAACAAAGAGACCTGCTGAACTTTTACCAGAGAAGAAGTCCCGTGTGAATTGCAGGTACTCACATGGGACGACAGAATCAAGAGAGGCAAGGACCAGGAAGCTGAATGGAGGGCAGCACGAGCAACAATCTGGAGTCAGCCATGGCCGCCGTTCGAGGTCACCAGCTACTCGAACAGTTAAAGAAACGAATAAGACAGGGAATATGAAAAGCAGTGTCATGAAAATGACCGGACAACCTGGGGACCAACAAGAGACAGTGACCACCGAGCATAGAGACGAAGGAAAGTTGGAGAAGCCAATGGATGGTTCAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTTTCATCTTTCTGTAGATTCTAATGCAGATTAGTGTATTTGGTTGGTGTTGATTTATTATCAATTTTCCTGAAATATGTTGTACACAAGACTCTGTTAGTTTCTGTAGTTCTTTTGATTGTTTGACTTTTACTTGCTTTGCTTCGTTTTTGTAAATGGGAAGTGGTAACATGGTTTGCTTTGACTCCAGTATTTCTCGTTGGTTTTTGAGATTCGAACTTGCTATGGGGATCTGTAATTCAAATGGTCCTCCAACTTGGCATCTCTCTTTTATTGTTTTTGGGAAAAGTGAAGTCTTTTTCCTTTCAATCTCTTTTTTCATTGTTTGTATTGAATATGCATGGAATACAGGTTATGTCTTCTCTGGTGGGGCTAACACGGGAACGCTTCTCCTTTTCTTTTCTCTCTGTGTTGCATTGTAGACTGTGCTGTCCCAAGCACTCCAGACAAAGGGGTCAACAAAAGTAGCACGGAGTCCAAGGAGAATTTGCACGAAGATTTCTCGTAATATTGTGAGTCATCATCTCTATTCACCTGCTGTTAATGCCTAATTAGGAAGTAATAACGAAAGAGCCTATAAAAAAACCCACTAAAATTCTTTTGCAAATGCTGATAACAATGGCTATTACGTAAAAAGATTCAGTATCGAGAACTTTAATTTGTGTTTTCGATGCTGACGTTTCTACTTTTCACAGTTGGTGGTAGAAGTATGTGGATAATTAACTTATGTTGTAACTTTGATGCCAGTGAAAGAGGAATGGGATTCATTATGAACATAACAATCACGGAACTAATCATGTATTACAGTAGCTGACCCAGCTTGCAACAATCATTCATTTTCATCCTCTCTTTTCATTAGGTGGGGGCAAGAGAAGGCCCAAATCCACATCATCAAATATAACCTACAGGGGCCTCTATACATATTGAAGTTAGAGACTGAAGTTGATGTGACTTTCACCATGTTTTCAACTTTAGAATGTCAAGTTGCAAGTCAGAATAAGCTGAAATTCATTCCAAGTGTGGGGTGACCCTTTGTTCTATAGTGATGTTATTTTTAAGGTCAACTGATGTTGGAGCTTGATGTTAAGCTTGATGATGGACACATGCTCAAGCTATGTTGATGTAGAGGCTTCAAAATGGGTTCTGGAGGACAGGGTGCAGGAGCTGGGTGAGCAATGTAGGTTGGAATTTCTTCACCTGGCATCAATACCGACACTCCTCGAGCGTAAACCGTCATCTACATAAATCAAGTAAAAAATAATTAATCAGTTAATACCCCTACGGTAAGAAAAACTTTGCTTCTCTGCTACAATTATATCAGTAGAAGTATATTACTTTACATGTCATCAAAGAGGAGAGAGAGATTTTAATGACTTGAACACTGTACCGTCACTGTTGATAACAGTGTATAAATATAAATTTGATTAAAAGATAGATGAATCAAAACCTCACTCCAATAGAACATTAATGCTTGTCTGAACCTTTTTTCCCTTTTTCTTTACCCTTTTTTCCCCTTATGAAGAGAAAGATAAGCCACATGATCAAACATGATGGTCACTAAAAGCAAATGTTCTCAAACAAGAAAGAAAACTCATAATAATGATCACCATTCTAATTTTCAGTTGAAAATAGCTGGCCTATGAGCTAAAAGGAGGACAACTTTATCATACTTGAGATGCAAGAATAGAACACAAATTAGTGGAAATAGATTCTGAATCATCCAGGACCTCCCTATTCAAAACCCCTTCTACCCTGCTAGTATTTTTCCCAACACAATAAAACTCTAAAGTATTACTTAAATCTTTGAGTACTCTCTCCCAACCAAACTCAGCTGTACATGATAGTATGGTACAAGTATACCTCATAGAATGTAGGAAAGACATTGAAAATGGTGCCAGCTGAGACTTTGAAACACTTTATAAAGCTAAATAAAATACTTAAAATATATGTGCACATTACTATAGTGTAATCAGAAAGGGAAACATAGCATGTGATTATGTTTGTAATTAACTTGCAACTGCACCTAAATGCTTATGAACAGTTCTGCTATTTCTTGCTTGAAAGTAAACAATGCATTTAATGGTGTAGGATAAAATGGTTGACAAAGTTTGTTACATCGAGATAACTTTGAATAATCTCTTGTTTTAAAATGTCATCTGGCACAGCTTCACAAGCTAGTAATGGTTTAAAAATTAAGAGGAGCTTGCAAATTTTAAAGACTTATGGATGTGTTTTGGCTATCAAATTTTATTCTAGTTAGATTGCTTTGACAGTTGAGACAAAAACACATGCTACCTACATGCTGTGGACCCTTATCCTTAAAATCTAGAATGAGGAAAACTATTGCATTAATGTTAACATACAGAAGTAATATAGAAAATTTCAGAACAGAACAGTTTCAAAATAGTTTTTTCTTTTAAGAAACAAACTTTGTAAAAGTCTAAACTCAAGAGGGCAACAGAAACGAAAGGTCGTCATTCGTCAATTATAACATCGCAAACTCAACAGGGGAAGAATACCAATTAGCAACTCAGCTGACAGCATGACGAACCACATAAAGAGCAACTGAATTACCTTGCCAAAACGATAAAGAGACCTTTCTTAAATACCTTACCAAAAGACTGATCTCATCAGCTGCATTCTTCTCTTCAGTAAAGTACGTCCGGCAGTTGTTTGAAAATAGTTTAAACATTATTAATTTTCATTGAAAGAACTAATTATTCTTTAAAGGTGATCCGTTTAAAGGATGGGTTTCGCACAGAAAGAGGTAAACACATGGTTATGATCTTATCACATTGCTAACAAATAATGTTTCTAAAGAAAAGCAGAAACTATTTATATTAGTAACACCATAAGATTATAATTTATAACTCTAAGGCCCCACAAAAAAAACTTCCATAACAAACAAATACGATACAACAACTTACAACTCTAAAGCTTAAGAAAAATGGCATGGGATTCATTTTTCCAAAAGATAATGTACAAATGAACTTTCCATGTATTAAGGTGGTGGAGAATATGATTTCTAGAGCCTTAAAAAGTTCAAAAGAGTCTCATGCTTACATGGTGGAATACAAGAGAACAGCTCATAATTAGTAAGGTCAATTATTCATCCCACTAAAGAAACTAACAGCCAACAAACTATGCCACTATTCTTGAAGATAATGAAATCATTTACACAAACAAATCAGCTTCATAATTCACAATTTACCAATCAAGCCTTAAATCAGCTAAAAGAAAACTCAAAATAAAGCAACTTGAAGAGCAAACAAAATGTGGACCACCATCAAAATGTAGTTGAAGAAGAAAAGAGAAGATAAAAACCTTAGGAGATGGGTAGCGAGGCTTTCCATCAAACACCATCTGTGCTTCAAGATCAGAAGGCGGCCGTCCGATGGCCGCCGGCGACCTGGGTCTTAAAAACCTCTCAAAAATTGCCATAACAAGGAACATAGAGATGAGAATCGCAGTAGCTACAAACCCAAACGACACCGCATTTACCGAATCGTCAAAACGGCTCCAATACTCCTCTCTTTCTGGGTTTAACGGTGATACCGCCGGCAACGCCGGCGCTATAGCCCCCCATTTTTGCTCACCTCCCATTAAAACAAAACCCCAGAAGAGTAATAACAAAAAAAAAAAAAAAAAAACT

mRNA sequence

TATTAGGTAATTTTTTTTTAGAATGTTGTTATATAACTGGTTATTACTTTTTAAATTAATTTAAAATTATTACTACCCGAATTTTAAAAATTGATCTCATGGATCGAGTGAAGCCCACTTCTAAACTGGGCCACGAATATTGATCATGAGGCTCAATAATCCCTTTACGTATGGCTGAAAACGCATTACGAACGAACGCCCTTCAACTGTCCAAATCCGAAGTCACCCAAATTCCGGTTAGGCTTCTTCTCCGAGATCGACGACCACGATGAACAAGCGCTGCCAAAGCCTTGCTCGAATCCTCAAATCCGTCAGTAGATCATTCTCTTCTTCATCTTCTTCCACCTCCGCCTCTGCTACATCCTCCCAATTCCCCCGCACGTTGGCCGGTCTCCGGGAACGACTCGCCGCGGAGTCCCCAATACTTTCTGATTTCGTTGATCTGCAATCTTCTGATTCGTATTCTGTGGAGGTTGGTACGAAGAAGAAGCCCCTTCCTAAACCTAAATGGATGAGGGAATCGGTGCCTGGAGGCGAGAAGTATGTTCAGATAAAGAAGAAGCTCCGGGAATTGAAGCTTCACACGGTTTGTGAGGAGGCTAAATGCCCTAATTTAGGGGAATGCTGGTCTGGTGGAGAAACCGGCACTGCCACTGCTACAATTATGATTCTTGGTGACACTTGTACTCGTGGTTGCAGGTTCTGTAACGTGAAGACATCACGAACTCCACCTCCACCGGATCCAAATGAGCCCACAAATGTTGCTGAAGCAATTGCATCATGGGGTTTGGATTATGTGGTCATTACCAGCGTTGATCGCGACGATTTACCTGATCAAGGGAGTGGTCATTTTGCAGAGACTGTGCAGAAACTTAAGGTGTTGAAGCCAAATATGCTCATTGAGGCCTTGGTTCCTGATTTTCGAGGAGACTCTGGCTGTGTGGAGAAAGTTGCAAGGTCGGGCCTTGACGTCTTTGCTCACAATATAGAGACAGTTGAAGAGCTTCAAGGAGTAGTTAGGGATCACCGTGCTAATTTCAAGCAATCATTAGATGTTCTAGTTATGGCCAAAGAGTTTTCTCTATCTGGAACTCTTACAAAGACTTCCATTATGTTAGGCTGTGGGGAAACACCAGATCAAGTTGTTCAAACAATGGAGAAGGTGAGAGCAGCTGGAGTTGATGTGATGACATTTGGGCAGTATATGAGACCTTCAAAACGCCACATGCCTGTATCAGAATACATTACTCCTGAGGCTTTTGAGAAGTATCAAAATATTGGCATGAAAATGGGTTTTCGATATGTGGCTTCTGGCCCAATGGTTAGGTCTTCATACAAGGCAGGAGAATTCTATATCAAGTCAATGATTGAATCAGATCGGGCAGCTTCTAATTCACAGCCTACCCAACTTTGATTATTGTTACCATTTCTATTGGTCATCTGTCCCTAACAATCCCTACAAAATTTAACAATGTTGCATGTAAGTTGGCATATAAGCAAATTGGACTTTTGATTTGATGGATTTGTCCAGTCGTTTTGTCAAATTTTTGTGCTCCTGATCCGCTGCAGATGTATTGTCACTGTAGCCATAAATTTTTGTTCTACTCCTATATAATATCTCCCCTTCATCCTGTTCTTTCTGATCAGCATAGGGGTATTACTATTCTTGTAATATCGGGATTGGAATTTTATTTATTTGCTATTTGTATAGGTTTACGTTTATACCATTTTGGTTCATACAAAAACTCAATTATTGGATTTCAATGCAAAAGCAGGTTCAACTGTGAACGAGTTGACTTAAAGGATCTGGTAATTTTCTTCTCAAGTCCTCATTCTATACGGATTGAAAAGATGTTAAGGTCATGAAAAGATGTAATGTTCTCTTATAGTGGTAAAATATTTATTTTTATAGAAGAACGTTAAAAGGAACGTCAAGTGAACATTAACATCTTTTTACGATTCCTCTGTCTTAAGCCAATCCCATGCCTCGTATTAAACACGCCATTGACAGTCAGTTTCTTCTCTATTGGTACTGGGCGTCGAGCCATTTCACTGCCAACTCTGCCAGTGTCTCGCCCAGGTGCTTTCCTTTCCCACCCAAAATTCGGTACCCTAATCGTTAATTTCAAATTTTCAAATCTTCAAATTCTAATATCTCACTTCATTTAGCTTCCATCTCCATTTCCATTTTTCACATTCACCACTCTATGGGTTGTTGCTGTAGCAGAGCCTTGGACAGGGGTCAACCTCATACCCTGGACAAGAACCATCGTTCTGCAAAGCCTTCGTCACCGGGATGGTTCGACACTGATGTCGAAAACGTTCCAGATAACAGAACCCCGGAAGAAGAAACCGTCAAAGAAGTCCTCTCAGAGACTCCCATTGCTAAGCCATGTAGTGTTCTGCAAACATCCCATAAGAAGCCACCGGAGCAGAGAGTAAAAGCAAGCGAAATGGATGGTTCGCTTGGCAAGGGAGAGGAAAGTATTGTTTCAGTTTCGGAGACGTCTCAGGTTACAGAGTGGTGCAGCAATATGAGTGAAAGCGTGTCGATGGCGACCACCATTTCGGAGCAAAGGGAAGGGGATGAAGCATCAAGTAAGAGCAGAGATATTGGTCGAAATATAAAACCAAAGATTCGCAGAAAACGGCCATGCTCCGGCAACCTATCATATCGAAGAGAACAGAGAGACAAATGTACAACAAAGAGACCTGCTGAACTTTTACCAGAGAAGAAGTCCCGTGTGAATTGCAGGTACTCACATGGGACGACAGAATCAAGAGAGGCAAGGACCAGGAAGCTGAATGGAGGGCAGCACGAGCAACAATCTGGAGTCAGCCATGGCCGCCGTTCGAGGTCACCAGCTACTCGAACAGTTAAAGAAACGAATAAGACAGGGAATATGAAAAGCAGTGTCATGAAAATGACCGGACAACCTGGGGACCAACAAGAGACAGTGACCACCGAGCATAGAGACGAAGGAAAGTTGGAGAAGCCAATGGATGGTTCAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTTTCATCTTTCTGTAGATTCTAATGCAGATTAGTGTATTTGGTTGGTGTTGATTTATTATCAATTTTCCTGAAATATGTTGTACACAAGACTCTGTTAGTTTCTGTAGTTCTTTTGATTGTTTGACTTTTACTTGCTTTGCTTCGTTTTTGTAAATGGGAAGTGGTAACATGGTTTGCTTTGACTCCAGTATTTCTCGTTGGTTTTTGAGATTCGAACTTGCTATGGGGATCTGTAATTCAAATGGTCCTCCAACTTGGCATCTCTCTTTTATTGTTTTTGGGAAAAGTGAAGTCTTTTTCCTTTCAATCTCTTTTTTCATTGTTTGTATTGAATATGCATGGAATACAGGTTATGTCTTCTCTGGTGGGGCTAACACGGGAACGCTTCTCCTTTTCTTTTCTCTCTGTGTTGCATTGTAGACTGTGCTGTCCCAAGCACTCCAGACAAAGGGGTCAACAAAAGTAGCACGGAGTCCAAGGAGAATTTGCACGAAGATTTCTCGTAATATTGTGAGTCATCATCTCTATTCACCTGCTGTTAATGCCTAATTAGGAAGTAATAACGAAAGAGCCTATAAAAAAACCCACTAAAATTCTTTTGCAAATGCTGATAACAATGGCTATTACGTAAAAAGATTCAGTATCGAGAACTTTAATTTGTGTTTTCGATGCTGACGTTTCTACTTTTCACAGTTGGTGGTAGAAGTATGTGGATAATTAACTTATGTTGTAACTTTGATGCCAGTGAAAGAGGAATGGGATTCATTATGAACATAACAATCACGGAACTAATCATGTATTACAGTAGCTGACCCAGCTTGCAACAATCATTCATTTTCATCCTCTCTTTTCATTAGGTGGGGGCAAGAGAAGGCCCAAATCCACATCATCAAATATAACCTACAGGGGCCTCTATACATATTGAAGTTAGAGACTGAAGTTGATGTGACTTTCACCATGTTTTCAACTTTAGAATGTCAAGTTGCAAGTCAGAATAAGCTGAAATTCATTCCAAGTGTGGGGTGACCCTTTGTTCTATAGTGATGTTATTTTTAAGGTCAACTGATGTTGGAGCTTGATGTTAAGCTTGATGATGGACACATGCTCAAGCTATGTTGATGTAGAGGCTTCAAAATGGGTTCTGGAGGACAGGGTGCAGGAGCTGGGTGAGCAATGTAGGTTGGAATTTCTTCACCTGGCATCAATACCGACACTCCTCGAGCGTAAACCGTCATCTACGAGATGGGTAGCGAGGCTTTCCATCAAACACCATCTGTGCTTCAAGATCAGAAGGCGGCCGTCCGATGGCCGCCGGCGACCTGGGTCTTAAAAACCTCTCAAAAATTGCCATAACAAGGAACATAGAGATGAGAATCGCAGTAGCTACAAACCCAAACGACACCGCATTTACCGAATCGTCAAAACGGCTCCAATACTCCTCTCTTTCTGGGTTTAACGGTGATACCGCCGGCAACGCCGGCGCTATAGCCCCCCATTTTTGCTCACCTCCCATTAAAACAAAACCCCAGAAGAGTAATAACAAAAAAAAAAAAAAAAAAACT

Coding sequence (CDS)

ATGAACAAGCGCTGCCAAAGCCTTGCTCGAATCCTCAAATCCGTCAGTAGATCATTCTCTTCTTCATCTTCTTCCACCTCCGCCTCTGCTACATCCTCCCAATTCCCCCGCACGTTGGCCGGTCTCCGGGAACGACTCGCCGCGGAGTCCCCAATACTTTCTGATTTCGTTGATCTGCAATCTTCTGATTCGTATTCTGTGGAGGTTGGTACGAAGAAGAAGCCCCTTCCTAAACCTAAATGGATGAGGGAATCGGTGCCTGGAGGCGAGAAGTATGTTCAGATAAAGAAGAAGCTCCGGGAATTGAAGCTTCACACGGTTTGTGAGGAGGCTAAATGCCCTAATTTAGGGGAATGCTGGTCTGGTGGAGAAACCGGCACTGCCACTGCTACAATTATGATTCTTGGTGACACTTGTACTCGTGGTTGCAGGTTCTGTAACGTGAAGACATCACGAACTCCACCTCCACCGGATCCAAATGAGCCCACAAATGTTGCTGAAGCAATTGCATCATGGGGTTTGGATTATGTGGTCATTACCAGCGTTGATCGCGACGATTTACCTGATCAAGGGAGTGGTCATTTTGCAGAGACTGTGCAGAAACTTAAGGTGTTGAAGCCAAATATGCTCATTGAGGCCTTGGTTCCTGATTTTCGAGGAGACTCTGGCTGTGTGGAGAAAGTTGCAAGGTCGGGCCTTGACGTCTTTGCTCACAATATAGAGACAGTTGAAGAGCTTCAAGGAGTAGTTAGGGATCACCGTGCTAATTTCAAGCAATCATTAGATGTTCTAGTTATGGCCAAAGAGTTTTCTCTATCTGGAACTCTTACAAAGACTTCCATTATGTTAGGCTGTGGGGAAACACCAGATCAAGTTGTTCAAACAATGGAGAAGGTGAGAGCAGCTGGAGTTGATGTGATGACATTTGGGCAGTATATGAGACCTTCAAAACGCCACATGCCTGTATCAGAATACATTACTCCTGAGGCTTTTGAGAAGTATCAAAATATTGGCATGAAAATGGGTTTTCGATATGTGGCTTCTGGCCCAATGGTTAGGTCTTCATACAAGGCAGGAGAATTCTATATCAAGTCAATGATTGAATCAGATCGGGCAGCTTCTAATTCACAGCCTACCCAACTTTGA

Protein sequence

MNKRCQSLARILKSVSRSFSSSSSSTSASATSSQFPRTLAGLRERLAAESPILSDFVDLQSSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNIETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASNSQPTQL

Homology

[Close]

BLAST of CsGy7G004020 vs. NCBI nr
Match: XP_004136815.1 (PREDICTED: lipoyl synthase 2, mitochondrial [Cucumis sativus] >KGN43590.1 hypothetical protein Csa_7G047260 [Cucumis sativus])

HSP 1 Score: 724.9 bits (1870), Expect = 1.4e-205
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ
Sbjct: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT
Sbjct: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI
Sbjct: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR
Sbjct: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE
Sbjct: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360

Query: 361 FYIKSMIESDRAASNSQPTQL 382
           FYIKSMIESDRAASNSQPTQL
Sbjct: 361 FYIKSMIESDRAASNSQPTQL 381

[Close]

BLAST of CsGy7G004020 vs. NCBI nr
Match: XP_016901725.1 (PREDICTED: lipoyl synthase 2, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 716.5 bits (1848), Expect = 4.9e-203
Identity = 376/381 (98.69%), Postives = 378/381 (99.21%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESP LSDFVDLQ
Sbjct: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPSLSDFVDLQ 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWM+ESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT
Sbjct: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI
Sbjct: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQG VRDHRANFKQSLDVLVMAKEFS SGTLTKTSIMLGCGETPDQVVQTMEKVR
Sbjct: 241 ETVEELQGAVRDHRANFKQSLDVLVMAKEFSPSGTLTKTSIMLGCGETPDQVVQTMEKVR 300

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQN+GMKMGFRYVASGPMVRSSYKAGE
Sbjct: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNLGMKMGFRYVASGPMVRSSYKAGE 360

Query: 361 FYIKSMIESDRAASNSQPTQL 382
           FYIKSMIESDRAASNSQPTQL
Sbjct: 361 FYIKSMIESDRAASNSQPTQL 381

[Close]

BLAST of CsGy7G004020 vs. NCBI nr
Match: XP_023531015.1 (lipoyl synthase 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 682.6 bits (1760), Expect = 7.9e-193
Identity = 350/380 (92.11%), Postives = 356/380 (93.68%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           MN R  SLARI +SV        XXXXXXXX  Q PRTLAGLRERLAAESP LSDFV L+
Sbjct: 1   MNTRRHSLARIFESVGRSLSYSSXXXXXXXXSSQIPRTLAGLRERLAAESPTLSDFVGLK 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWM+ESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEP NVAEAIASWGLDYVVIT
Sbjct: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPQNVAEAIASWGLDYVVIT 180

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGD G VEKVA+SGLDVFAHNI
Sbjct: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNI 240

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQG VRDHRANFKQSLDVLVMAKEF+ SGTLTKTSIMLGCGETPDQVVQTMEKVR
Sbjct: 241 ETVEELQGAVRDHRANFKQSLDVLVMAKEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVR 300

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKY N+GMKMGFRYVASGPMVRSSYKAGE
Sbjct: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGE 360

Query: 361 FYIKSMIESDRAASNSQPTQ 381
           FYIKSMIESDRAASNS PTQ
Sbjct: 361 FYIKSMIESDRAASNSHPTQ 380

[Close]

BLAST of CsGy7G004020 vs. NCBI nr
Match: XP_022147922.1 (lipoyl synthase 2, mitochondrial [Momordica charantia])

HSP 1 Score: 682.2 bits (1759), Expect = 1.0e-192
Identity = 354/380 (93.16%), Postives = 361/380 (95.00%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           M   CQSL RIL+S     XXXXXXXXXXXXXXQFPRTLA LRERLAAESP LSDFV LQ
Sbjct: 1   MKTPCQSLVRILESFGRSFXXXXXXXXXXXXXXQFPRTLAALRERLAAESPSLSDFVGLQ 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           S+DSYSVEVGTKKKPLPKPKWM+ESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  STDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEP NVAEAIASWGLDYVVIT
Sbjct: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPKNVAEAIASWGLDYVVIT 180

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQ LKVLKPNMLIEALVPDFRGD GCVEKVA+SGLDVFAHNI
Sbjct: 181 SVDRDDLPDQGSGHFAETVQTLKVLKPNMLIEALVPDFRGDIGCVEKVAKSGLDVFAHNI 240

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQG VRDHRANFKQSLDVL MAK+F+ SGTLTKTSIMLGCGE PDQVVQTMEKVR
Sbjct: 241 ETVEELQGAVRDHRANFKQSLDVLAMAKDFAPSGTLTKTSIMLGCGEKPDQVVQTMEKVR 300

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQN+GMKMGFRYVASGPMVRSSYKAGE
Sbjct: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNLGMKMGFRYVASGPMVRSSYKAGE 360

Query: 361 FYIKSMIESDRAASNSQPTQ 381
           FYIKSMIESDRAASNSQPTQ
Sbjct: 361 FYIKSMIESDRAASNSQPTQ 380

[Close]

BLAST of CsGy7G004020 vs. NCBI nr
Match: XP_022930787.1 (lipoyl synthase 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 680.2 bits (1754), Expect = 3.9e-192
Identity = 349/380 (91.84%), Postives = 356/380 (93.68%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           MN R  SLARI +SV        XXXXXXXX  Q PRTLAGLRERLAAESP LSDFV L+
Sbjct: 1   MNARRHSLARIFESVGRSLSYSSXXXXXXXXSSQVPRTLAGLRERLAAESPTLSDFVGLK 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWM+ESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEP NVAEAIASWGLDYVVIT
Sbjct: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPQNVAEAIASWGLDYVVIT 180

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGD G VEKVA+SGLDVFAHNI
Sbjct: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNI 240

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQG VRDHRANFKQSLDVLVMAKEF+ SGTLTKTSIMLGCGETPDQVVQTMEKVR
Sbjct: 241 ETVEELQGAVRDHRANFKQSLDVLVMAKEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVR 300

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKY N+GMKMGFRYVASGPMVRSSYKAGE
Sbjct: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGE 360

Query: 361 FYIKSMIESDRAASNSQPTQ 381
           FYIKSMIESDRAAS+S PTQ
Sbjct: 361 FYIKSMIESDRAASSSHPTQ 380

[Close]

BLAST of CsGy7G004020 vs. TAIR10
Match: AT2G20860.1 (lipoic acid synthase 1)

HSP 1 Score: 576.6 bits (1485), Expect = 1.1e-164
Identity = 282/343 (82.22%), Postives = 309/343 (90.09%), Query Frame = 0


Query: 34  QFPRTLAGLRERLAAESPILSDFVDLQSSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYV 93
           Q P++L  LR RLA ESP L+DF+     D+YSVEVGTKKKPLPKPKWM+ES+PGGE+YV
Sbjct: 32  QSPKSLEALRARLANESPSLTDFI---HGDTYSVEVGTKKKPLPKPKWMKESIPGGERYV 91

Query: 94  QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT 153
           QIKKKLR+LKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTS  
Sbjct: 92  QIKKKLRDLKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSXX 151

Query: 154 PPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEA 213
                     NVAEAIASWG+DYVVITSVDRDDLPDQGSGHFAETVQ+LK LKP MLIEA
Sbjct: 152 XXXXXXXXXXNVAEAIASWGVDYVVITSVDRDDLPDQGSGHFAETVQRLKFLKPEMLIEA 211

Query: 214 LVPDFRGDSGCVEKVARSGLDVFAHNIETVEELQGVVRDHRANFKQSLDVLVMAKEFSLS 273
           LVPDFRGD GCVEKV++SGLDV AHNIETVEELQ  VRDHRANFKQSLDVL MAKE++ +
Sbjct: 212 LVPDFRGDGGCVEKVSKSGLDVLAHNIETVEELQSFVRDHRANFKQSLDVLRMAKEYAPA 271

Query: 274 GTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEK 333
           GTLTKTS+MLGCGETPDQVV+TMEKVRAAGVDVMTFGQYMRPSKRHMPV+EY+TP+AFE+
Sbjct: 272 GTLTKTSVMLGCGETPDQVVKTMEKVRAAGVDVMTFGQYMRPSKRHMPVAEYVTPDAFER 331

Query: 334 YQNIGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASNS 377
           Y+ +GM+MGFRYVASGPMVRSSYKAGE+YIKSMIE+DR AS S
Sbjct: 332 YRLLGMEMGFRYVASGPMVRSSYKAGEYYIKSMIEADRVASPS 371

[Close]

BLAST of CsGy7G004020 vs. TAIR10
Match: AT5G08415.1 (Radical SAM superfamily protein)

HSP 1 Score: 382.9 bits (982), Expect = 2.3e-106
Identity = 177/299 (59.20%), Postives = 232/299 (77.59%), Query Frame = 0


Query: 78  KPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGD 137
           KP W+R+  P GE++ ++K+ L  L L+TVCEEA+CPN+GECW+GG  G ATATIM+LGD
Sbjct: 97  KPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGECWNGGGDGVATATIMVLGD 156

Query: 138 TCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAE 197
           TCTRGCRFC VKTSR PPPPDP EP N A+AIASWG+DY+VITSVDRDD+PD GSGHFA+
Sbjct: 157 TCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIVITSVDRDDIPDGGSGHFAQ 216

Query: 198 TVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNIETVEELQGVVRDHRANF 257
           TV+ +K  KP+++IE L  DFRGD   V+ +  SGLDVFAHN+ETV+ LQ +VRD RA +
Sbjct: 217 TVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAHNVETVKRLQRLVRDPRAGY 276

Query: 258 KQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSK 317
           +QS+ VL  AK  S  G +TKTSIMLG GET +++ + M  +RA  VD++T GQY++P+ 
Sbjct: 277 EQSMSVLKHAK-ISKPGMITKTSIMLGLGETDEELKEAMADLRAIDVDILTLGQYLQPTP 336

Query: 318 RHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASNS 377
            H+ V EY+TPE F+ ++  G  +GFRYVASGP+VRSSY+AGE ++K+M++   + S S
Sbjct: 337 LHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAGELFVKTMVKESYSKSLS 394

[Close]

BLAST of CsGy7G004020 vs. Swiss-Prot
Match: sp|B9H5L9|LIAS_POPTR (Lipoyl synthase, mitochondrial OS=Populus trichocarpa OX=3694 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 3.6e-181
Identity = 308/345 (89.28%), Postives = 327/345 (94.78%), Query Frame = 0


Query: 34  QFPRTLAGLRERLAAESPILSDFVDLQSSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYV 93
           QF +TLAGLR RLA ESP LSDF+ LQS+++YSVEVGTKKKPLPKPKWMRE++PGGEKYV
Sbjct: 39  QFSQTLAGLRARLAVESPTLSDFIHLQSNNTYSVEVGTKKKPLPKPKWMREAIPGGEKYV 98

Query: 94  QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT 153
           QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT
Sbjct: 99  QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT 158

Query: 154 PPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEA 213
           PPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDL DQGSGHFAETV KLK LKPNMLIEA
Sbjct: 159 PPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAETVHKLKTLKPNMLIEA 218

Query: 214 LVPDFRGDSGCVEKVARSGLDVFAHNIETVEELQGVVRDHRANFKQSLDVLVMAKEFSLS 273
           LVPDFRGD GCVEKVA+SGLDVFAHNIETVEELQ  VRDHRANFKQSLDVL+MAKE++  
Sbjct: 219 LVPDFRGDRGCVEKVAKSGLDVFAHNIETVEELQSSVRDHRANFKQSLDVLMMAKEYAPP 278

Query: 274 GTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEK 333
           GTLTKTSIMLGCGE P+QVV+TMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITP+AFEK
Sbjct: 279 GTLTKTSIMLGCGEAPEQVVKTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPDAFEK 338

Query: 334 YQNIGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASNSQP 379
           Y+ +GM+MGFRYVASGPMVRSSYKAGEFYIKSMIESDR+ S+  P
Sbjct: 339 YKTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMIESDRSVSSQLP 383

[Close]

BLAST of CsGy7G004020 vs. Swiss-Prot
Match: sp|Q3LSN5|LIAS2_PEA (Lipoyl synthase 2, mitochondrial OS=Pisum sativum OX=3888 GN=LIP1-2 PE=2 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 2.5e-174
Identity = 297/342 (86.84%), Postives = 322/342 (94.15%), Query Frame = 0


Query: 34  QFPRTLAGLRERLAAESPILSDFVDLQSSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYV 93
           +  + LA LR RLA ESP LSDF+ L+S ++YSVEVGTKKKPLPKPKWM+ES+PGGEKYV
Sbjct: 35  ELQQNLAALRARLAMESPSLSDFISLKSDNAYSVEVGTKKKPLPKPKWMKESIPGGEKYV 94

Query: 94  QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT 153
           QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT
Sbjct: 95  QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT 154

Query: 154 PPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEA 213
           PP    +EPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHF ETVQKLK LKP+MLIEA
Sbjct: 155 PPXXXXDEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFTETVQKLKALKPSMLIEA 214

Query: 214 LVPDFRGDSGCVEKVARSGLDVFAHNIETVEELQGVVRDHRANFKQSLDVLVMAKEFSLS 273
           LVPDFRG++ CVEKV++SGLDVFAHNIETVEELQ  VRDHRANFKQSLDVL+MAKE++ +
Sbjct: 215 LVPDFRGNAECVEKVSKSGLDVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKEYAPA 274

Query: 274 GTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEK 333
           GTLTKTSIMLGCGETPDQ+V+TMEKVRAAGVDVMTFGQ+MRPSKRHMPVSEYITPEAFEK
Sbjct: 275 GTLTKTSIMLGCGETPDQIVKTMEKVRAAGVDVMTFGQHMRPSKRHMPVSEYITPEAFEK 334

Query: 334 YQNIGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASN 376
           YQ +GM+MGFRYVASGPMVRSSYKAGEFYIKSMI+SDRAAS+
Sbjct: 335 YQTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMIDSDRAASS 376

[Close]

BLAST of CsGy7G004020 vs. Swiss-Prot
Match: sp|Q3LSN4|LIAS1_PEA (Lipoyl synthase 1, mitochondrial OS=Pisum sativum OX=3888 GN=LIP1-1 PE=2 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 3.3e-174
Identity = 297/342 (86.84%), Postives = 321/342 (93.86%), Query Frame = 0


Query: 34  QFPRTLAGLRERLAAESPILSDFVDLQSSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYV 93
           +  + LA LR RLA ESP LSDF+ L+S ++YSVEVGTKKKPLPKPKWM+ES+PGGEKYV
Sbjct: 35  ELQQNLAALRARLAMESPSLSDFISLKSDNAYSVEVGTKKKPLPKPKWMKESIPGGEKYV 94

Query: 94  QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT 153
           QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT
Sbjct: 95  QIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT 154

Query: 154 PPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEA 213
           PP    +EPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHF ETVQKLK LKP+ LIEA
Sbjct: 155 PPXXXXDEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFTETVQKLKALKPSTLIEA 214

Query: 214 LVPDFRGDSGCVEKVARSGLDVFAHNIETVEELQGVVRDHRANFKQSLDVLVMAKEFSLS 273
           LVPDFRG++ CVEKV++SGLDVFAHNIETVEELQ  VRDHRANFKQSLDVL+MAKE++ +
Sbjct: 215 LVPDFRGNAECVEKVSKSGLDVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKEYAPA 274

Query: 274 GTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEK 333
           GTLTKTSIMLGCGETPDQ+V+TMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEK
Sbjct: 275 GTLTKTSIMLGCGETPDQIVKTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEK 334

Query: 334 YQNIGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASN 376
           YQ +GM+MGFRYVASGPMVRSSYKAGEFYIKSMI+SDRAAS+
Sbjct: 335 YQTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMIDSDRAASS 376

[Close]

BLAST of CsGy7G004020 vs. Swiss-Prot
Match: sp|B7FM45|LIAS_MEDTR (Lipoyl synthase, mitochondrial OS=Medicago truncatula OX=3880 GN=LIP1 PE=2 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 1.4e-172
Identity = 305/375 (81.33%), Postives = 337/375 (89.87%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           M  R +++A+ LKS         XXXXXXXX  +FP+ L  LR RLA ESP LSDF+ L+
Sbjct: 2   MYSRFRTVAKNLKSTTKPFSFTTXXXXXXXXSSEFPQNLTELRARLARESPSLSDFISLK 61

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           S+++YSVEVGTKK PLPKPKWM+ES+PGG KYVQIKKKLRELKLHTVCEEAKCPN+GECW
Sbjct: 62  SNNAYSVEVGTKKNPLPKPKWMKESIPGGWKYVQIKKKLRELKLHTVCEEAKCPNMGECW 121

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPP   P+EPTNVAEAIASWGLDYVVIT
Sbjct: 122 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPXXXPDEPTNVAEAIASWGLDYVVIT 181

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SV RDDLPDQGS HF ETVQKLK+LKP++LIEALVPDFRG++ CVEKV++SGLDVFAHNI
Sbjct: 182 SVGRDDLPDQGSSHFTETVQKLKILKPSILIEALVPDFRGNAECVEKVSKSGLDVFAHNI 241

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQ  VRDHRANF QSLDVL MAK+++ +GTLTKTSIMLGCGETPDQ+V+TMEKVR
Sbjct: 242 ETVEELQSAVRDHRANFNQSLDVLRMAKDYAPAGTLTKTSIMLGCGETPDQIVKTMEKVR 301

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQ +GM+MGFRYVASGPMVRSSYKAGE
Sbjct: 302 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGE 361

Query: 361 FYIKSMIESDRAASN 376
           FYIKSMI+SDRA S+
Sbjct: 362 FYIKSMIDSDRAVSS 376

[Close]

BLAST of CsGy7G004020 vs. Swiss-Prot
Match: sp|A5CB81|LIAS_VITVI (Lipoyl synthase, mitochondrial OS=Vitis vinifera OX=29760 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 1.2e-168
Identity = 293/348 (84.20%), Postives = 316/348 (90.80%), Query Frame = 0


Query: 36  PRTLAGLRERLAAESPILSDFVDLQSSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQI 95
           P+TLA LR RLA ESP LSDFV LQ+SD YSVEVGTKKKPL KPKWM+ES+PGG KY QI
Sbjct: 43  PQTLASLRHRLAVESPSLSDFVRLQTSDDYSVEVGTKKKPLSKPKWMKESIPGGAKYTQI 102

Query: 96  KKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRTPP 155
           KKKLR+L LHTVCEEA+CPN+GECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRT  
Sbjct: 103 KKKLRQLNLHTVCEEARCPNMGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRTXX 162

Query: 156 PPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALV 215
                  + VAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLK+LKPNMLIEALV
Sbjct: 163 XXXXXXXSKVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKILKPNMLIEALV 222

Query: 216 PDFRGDSGCVEKVARSGLDVFAHNIETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGT 275
           PDFRGD GCVEKV++SGLDVFAHNIETVEELQ  VRDHRANFKQSL+VL +AKE++ +GT
Sbjct: 223 PDFRGDPGCVEKVSKSGLDVFAHNIETVEELQSAVRDHRANFKQSLEVLKLAKEYADAGT 282

Query: 276 LTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQ 335
           LTKTSIMLGCGETPDQVV+TMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKY+
Sbjct: 283 LTKTSIMLGCGETPDQVVRTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYR 342

Query: 336 NIGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAAS--NSQPTQL 382
            +GM MGFRYVASGPMVRSSYKAGEFYIKSMI++DRA S  +S P+ L
Sbjct: 343 ILGMDMGFRYVASGPMVRSSYKAGEFYIKSMIDADRAMSWASSSPSPL 390

[Close]

BLAST of CsGy7G004020 vs. TrEMBL
Match: tr|A0A0A0K1R3|A0A0A0K1R3_CUCSA (Lipoyl synthase, mitochondrial OS=Cucumis sativus OX=3659 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 9.2e-206
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ
Sbjct: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT
Sbjct: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI
Sbjct: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR
Sbjct: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE
Sbjct: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360

Query: 361 FYIKSMIESDRAASNSQPTQL 382
           FYIKSMIESDRAASNSQPTQL
Sbjct: 361 FYIKSMIESDRAASNSQPTQL 381

[Close]

BLAST of CsGy7G004020 vs. TrEMBL
Match: tr|A0A1S4E162|A0A1S4E162_CUCME (Lipoyl synthase, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495529 PE=3 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 3.3e-203
Identity = 376/381 (98.69%), Postives = 378/381 (99.21%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESP LSDFVDLQ
Sbjct: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPSLSDFVDLQ 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWM+ESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT
Sbjct: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI
Sbjct: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQG VRDHRANFKQSLDVLVMAKEFS SGTLTKTSIMLGCGETPDQVVQTMEKVR
Sbjct: 241 ETVEELQGAVRDHRANFKQSLDVLVMAKEFSPSGTLTKTSIMLGCGETPDQVVQTMEKVR 300

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQN+GMKMGFRYVASGPMVRSSYKAGE
Sbjct: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNLGMKMGFRYVASGPMVRSSYKAGE 360

Query: 361 FYIKSMIESDRAASNSQPTQL 382
           FYIKSMIESDRAASNSQPTQL
Sbjct: 361 FYIKSMIESDRAASNSQPTQL 381

[Close]

BLAST of CsGy7G004020 vs. TrEMBL
Match: tr|A0A1R3J2J1|A0A1R3J2J1_COCAP (Lipoyl synthase, mitochondrial OS=Corchorus capsularis OX=210143 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 1.3e-183
Identity = 321/376 (85.37%), Postives = 340/376 (90.43%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           M  R  SLAR LKS                   +FP TLAGLR RLAAESP LSDFV LQ
Sbjct: 2   MQSRFSSLARTLKSSAAKSRRFSSTVESPGTKPEFPPTLAGLRARLAAESPALSDFVGLQ 61

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           + + YSVEVGTKKKPLPKPKWMRES+PGGEKYVQIKKKL+ELKLHTVCEEA+CPNLGECW
Sbjct: 62  NDNQYSVEVGTKKKPLPKPKWMRESIPGGEKYVQIKKKLKELKLHTVCEEARCPNLGECW 121

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEP NVAEAIASWGLDYVVIT
Sbjct: 122 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPGNVAEAIASWGLDYVVIT 181

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQKLK LKPNMLIEALVPDFRGD+GCVEKVA+SGLDVFAHNI
Sbjct: 182 SVDRDDLPDQGSGHFAETVQKLKALKPNMLIEALVPDFRGDAGCVEKVAKSGLDVFAHNI 241

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQ  VRDHRANFKQSLDVL+MAK+++ +GTLTKTSIMLGCGETPDQV++TMEKVR
Sbjct: 242 ETVEELQRAVRDHRANFKQSLDVLMMAKDYAPAGTLTKTSIMLGCGETPDQVIKTMEKVR 301

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQ +GM+MGFRYVASGPMVRSSYKAGE
Sbjct: 302 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGE 361

Query: 361 FYIKSMIESDRAASNS 377
           FYIKSMIESDRAA++S
Sbjct: 362 FYIKSMIESDRAAASS 377

[Close]

BLAST of CsGy7G004020 vs. TrEMBL
Match: tr|A0A1R3JV88|A0A1R3JV88_9ROSI (Lipoyl synthase, mitochondrial OS=Corchorus olitorius OX=93759 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 8.4e-183
Identity = 319/376 (84.84%), Postives = 340/376 (90.43%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           M  R  SLAR LKS                   +FP TLAGLR RLAAE+P LSDFV LQ
Sbjct: 2   MQSRFSSLARTLKSSAAKSRRFSSTVESPGTKPEFPPTLAGLRARLAAEAPALSDFVGLQ 61

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           + + YSVEVGTKKKPLPKPKWMRES+PGGEKYVQIKKKL+ELKLHTVCEEA+CPNLGECW
Sbjct: 62  NDNQYSVEVGTKKKPLPKPKWMRESIPGGEKYVQIKKKLKELKLHTVCEEARCPNLGECW 121

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEP NVAEAIASWGLDYVVIT
Sbjct: 122 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPGNVAEAIASWGLDYVVIT 181

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDLPDQGSGHFAETVQKLK LKPNMLIEALVPDFRGD+GCVEKVA+SGLDVFAHNI
Sbjct: 182 SVDRDDLPDQGSGHFAETVQKLKALKPNMLIEALVPDFRGDAGCVEKVAKSGLDVFAHNI 241

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQ  VRDHRANFKQSLDVL+MAK+++ +GTLTKTSIMLGCGETP+QV++TMEKVR
Sbjct: 242 ETVEELQRAVRDHRANFKQSLDVLMMAKDYAPAGTLTKTSIMLGCGETPEQVIKTMEKVR 301

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQ +GM+MGFRYVASGPMVRSSYKAGE
Sbjct: 302 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGE 361

Query: 361 FYIKSMIESDRAASNS 377
           FYIKSMIESDRAA++S
Sbjct: 362 FYIKSMIESDRAAASS 377

[Close]

BLAST of CsGy7G004020 vs. TrEMBL
Match: tr|A0A0D2SA19|A0A0D2SA19_GOSRA (Lipoyl synthase, mitochondrial OS=Gossypium raimondii OX=29730 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 1.5e-179
Identity = 315/376 (83.78%), Postives = 337/376 (89.63%), Query Frame = 0


Query: 1   MNKRCQSLARILKSVXXXXXXXXXXXXXXXXXXQFPRTLAGLRERLAAESPILSDFVDLQ 60
           M  R  S+ R + S                    FP TLAGLR RLAAESP LSDFV LQ
Sbjct: 2   MQSRFTSVVRAISSAAKARPFSSTIDSPTPTKPDFPPTLAGLRARLAAESPTLSDFVGLQ 61

Query: 61  SSDSYSVEVGTKKKPLPKPKWMRESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           +++ YSVEVGTKKKPLPKPKWMRES+PGGEKYVQIK KLRELKLHTVCEEA+CPNLGECW
Sbjct: 62  TNNLYSVEVGTKKKPLPKPKWMRESIPGGEKYVQIKAKLRELKLHTVCEEARCPNLGECW 121

Query: 121 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPNEPTNVAEAIASWGLDYVVIT 180
           SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDP+EP NVAEAIASWGLDYVVIT
Sbjct: 122 SGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPDEPRNVAEAIASWGLDYVVIT 181

Query: 181 SVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDSGCVEKVARSGLDVFAHNI 240
           SVDRDDL DQGSGHFAETV+KLK LKPNMLIEALVPDFRGD+GCVEKVA+SGLDVFAHNI
Sbjct: 182 SVDRDDLADQGSGHFAETVEKLKTLKPNMLIEALVPDFRGDAGCVEKVAKSGLDVFAHNI 241

Query: 241 ETVEELQGVVRDHRANFKQSLDVLVMAKEFSLSGTLTKTSIMLGCGETPDQVVQTMEKVR 300
           ETVEELQ VVRDHRANFKQSLDVL+MAKE++ +GTLTKTSIMLGCGETPDQVV+TMEKVR
Sbjct: 242 ETVEELQRVVRDHRANFKQSLDVLMMAKEYAPAGTLTKTSIMLGCGETPDQVVKTMEKVR 301

Query: 301 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQNIGMKMGFRYVASGPMVRSSYKAGE 360
           AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKY+ +GM+MGFRYVASGPMVRSSYKAGE
Sbjct: 302 AAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYRALGMEMGFRYVASGPMVRSSYKAGE 361

Query: 361 FYIKSMIESDRAASNS 377
           FYIKSMIESDR+A++S
Sbjct: 362 FYIKSMIESDRSAASS 377

The following BLAST results are available for this feature:

BLAST of CsGy7G004020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136815.1	1.4e-205	100.00	PREDICTED: lipoyl synthase 2, mitochondrial [Cucumis sativus] >KGN43590.1 hypoth...	[more]
XP_016901725.1	4.9e-203	98.69	PREDICTED: lipoyl synthase 2, mitochondrial isoform X1 [Cucumis melo]	[more]
XP_023531015.1	7.9e-193	92.11	lipoyl synthase 2, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022147922.1	1.0e-192	93.16	lipoyl synthase 2, mitochondrial [Momordica charantia]	[more]
XP_022930787.1	3.9e-192	91.84	lipoyl synthase 2, mitochondrial-like [Cucurbita moschata]	[more]

BLAST of CsGy7G004020 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20860.1	1.1e-164	82.22	lipoic acid synthase 1	[more]
AT5G08415.1	2.3e-106	59.20	Radical SAM superfamily protein	[more]

BLAST of CsGy7G004020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9H5L9\|LIAS_POPTR	3.6e-181	89.28	Lipoyl synthase, mitochondrial OS=Populus trichocarpa OX=3694 GN=LIP1 PE=3 SV=1	[more]
sp\|Q3LSN5\|LIAS2_PEA	2.5e-174	86.84	Lipoyl synthase 2, mitochondrial OS=Pisum sativum OX=3888 GN=LIP1-2 PE=2 SV=1	[more]
sp\|Q3LSN4\|LIAS1_PEA	3.3e-174	86.84	Lipoyl synthase 1, mitochondrial OS=Pisum sativum OX=3888 GN=LIP1-1 PE=2 SV=1	[more]
sp\|B7FM45\|LIAS_MEDTR	1.4e-172	81.33	Lipoyl synthase, mitochondrial OS=Medicago truncatula OX=3880 GN=LIP1 PE=2 SV=1	[more]
sp\|A5CB81\|LIAS_VITVI	1.2e-168	84.20	Lipoyl synthase, mitochondrial OS=Vitis vinifera OX=29760 GN=LIP1 PE=3 SV=1	[more]

BLAST of CsGy7G004020 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K1R3\|A0A0A0K1R3_CUCSA	9.2e-206	100.00	Lipoyl synthase, mitochondrial OS=Cucumis sativus OX=3659 GN=LIP1 PE=3 SV=1	[more]
tr\|A0A1S4E162\|A0A1S4E162_CUCME	3.3e-203	98.69	Lipoyl synthase, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495529 PE=3 SV=1	[more]
tr\|A0A1R3J2J1\|A0A1R3J2J1_COCAP	1.3e-183	85.37	Lipoyl synthase, mitochondrial OS=Corchorus capsularis OX=210143 GN=LIP1 PE=3 SV...	[more]
tr\|A0A1R3JV88\|A0A1R3JV88_9ROSI	8.4e-183	84.84	Lipoyl synthase, mitochondrial OS=Corchorus olitorius OX=93759 GN=LIP1 PE=3 SV=1	[more]
tr\|A0A0D2SA19\|A0A0D2SA19_GOSRA	1.5e-179	83.78	Lipoyl synthase, mitochondrial OS=Gossypium raimondii OX=29730 GN=LIP1 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005739	mitochondrion

Vocabulary: **Molecular Function**
Term	Definition
GO:0016992	lipoate synthase activity
GO:0051539	4 iron, 4 sulfur cluster binding
GO:0051536	iron-sulfur cluster binding
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009107	lipoate biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR027527	Lipoyl_synth_mt
IPR031691	LIAS_N
IPR007197	rSAM
IPR013785	Aldolase_TIM
IPR003698	Lipoyl_synth
IPR006638	Elp3/MiaB/NifB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009107	lipoate biosynthetic process
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016992	lipoate synthase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G004020.1	CsGy7G004020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 129..336 e-value: 5.2E-8 score: 42.6
IPR003698	Lipoyl synthase	TIGRFAM	TIGR00510	TIGR00510	coord: 72..366 e-value: 2.7E-120 score: 399.2
IPR003698	Lipoyl synthase	PIRSF	PIRSF005963	Lipoyl_synth	coord: 17..380 e-value: 2.5E-146 score: 485.2
IPR003698	Lipoyl synthase	SFLD	SFLDF00271	lipoyl_synthase	coord: 70..366 e-value: 0.0 score: 435.2
IPR003698	Lipoyl synthase	HAMAP	MF_00206	Lipoyl_synth	coord: 78..372 score: 131.907
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 122..353 e-value: 9.9E-15 score: 56.2
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 136..298 e-value: 2.7E-11 score: 44.0
IPR007197	Radical SAM	SFLD	SFLDS00029	Radical_SAM	coord: 136..298 e-value: 1.6E-13 score: 45.9
IPR031691	Lipoyl synthase, N-terminal	PFAM	PF16881	LIAS_N	coord: 5..113 e-value: 2.8E-16 score: 59.8
None	No IPR available	SFLD	SFLDG01058	lipoyl_synthase_like	coord: 70..366 e-value: 0.0 score: 435.2
None	No IPR available	PANTHER	PTHR10949:SF25	LIPOYL SYNTHASE, MITOCHONDRIAL	coord: 13..377
None	No IPR available	PANTHER	PTHR10949	LIPOYL SYNTHASE	coord: 13..377
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 133..313 e-value: 4.97179E-7 score: 47.7134
None	No IPR available	SUPERFAMILY	SSF102114	Radical SAM enzymes	coord: 94..369
IPR027527	Lipoyl synthase, mitochondrial	HAMAP	MF_03128	Lipoyl_synth_plantM	coord: 20..375 score: 61.665

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G004020	Cla007734	Watermelon (97103) v1	cgybwmB558
CsGy7G004020	Csa7G047260	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G004020	MELO3C018756	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G004020	ClCG02G001230	Watermelon (Charleston Gray)	cgybwcgB506
CsGy7G004020	CSPI07G04400	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G004020	CmaCh11G018620	Cucurbita maxima (Rimu)	cgybcmaB896
CsGy7G004020	CmaCh19G009730	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G004020	CmoCh11G019390	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G004020	CmoCh19G010060	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G004020	Lsi11G015260	Bottle gourd (USVL1VR-Ls)	cgyblsiB462
CsGy7G004020	Cp4.1LG15g07930	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G004020	MELO3C018756.2	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G004020	CsaV3_7G004210	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G004020	Cla97C02G027660	Watermelon (97103) v2	cgybwmbB502
CsGy7G004020	Bhi05G001585	Wax gourd	cgybwgoB633
CsGy7G004020	Carg19106	Silver-seed gourd	carcgybB0717
CsGy7G004020	Carg19221	Silver-seed gourd	carcgybB0864

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G004020	Watermelon (97103) v2	cgybwmbB497
CsGy7G004020	Wax gourd	cgybwgoB655
CsGy7G004020	Bottle gourd (USVL1VR-Ls)	cgyblsiB457
CsGy7G004020	Cucumber (Gy14) v2	cgybcgybB153
CsGy7G004020	Cucurbita maxima (Rimu)	cgybcmaB909
CsGy7G004020	Cucurbita maxima (Rimu)	cgybcmaB960
CsGy7G004020	Cucurbita moschata (Rifu)	cgybcmoB892
CsGy7G004020	Cucurbita moschata (Rifu)	cgybcmoB943
CsGy7G004020	Cucurbita pepo (Zucchini)	cgybcpeB944
CsGy7G004020	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G004020	Cucurbita pepo (Zucchini)	cgybcpeB973
CsGy7G004020	Watermelon (Charleston Gray)	cgybwcgB497
CsGy7G004020	Watermelon (Charleston Gray)	cgybwcgB499
CsGy7G004020	Watermelon (97103) v1	cgybwmB561
CsGy7G004020	Wild cucumber (PI 183967)	cgybcpiB299
CsGy7G004020	Silver-seed gourd	carcgybB0032
CsGy7G004020	Cucumber (Chinese Long) v3	cgybcucB311