CsGy7G003830 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G003830
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Cytochrome b6-f complex iron-sulfur subunit
Location	Chr7 : 2917921 .. 2921042 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTATTGTTCTTCAGAAATGAAAAGGGAAAAAAAAAATCATGCGAATTGTGAACTCTGAAGTTTGTGGCCATTTGGAACCGATGTGGCTAATTGCCTTATCTTCTCCCTTTTGTGGACATCAAAATTTAGCAACTTTTCAATACAATCTCTCCAACCACTGATATAACCATTACCCACATTTTAGATTTTCCCCTCCACTCCTTGCTCTGATCCATCCATGGCGTCTTCCACTCTATCTTCTGCAACCCCATCACAGGTATCTTTAATTTCTTCACTTTACTTCACTCATCTTGTAACCAACTTCAATTTTTTTTTGCCCGTTGTTATTGTTTTTCAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCATCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGTGGTTAAAATTTCTTGTCAAGCTACTAGTATTCCAGCTGATCGAGTCCCGGATATGGATAAAAGGAAGACTATGAATTTGCTTCTTTTGGGTGCCATTGGACTTCCCACTGCTACTATGTTGTATCCTTACACCTATTTTTTCGTCCCTCCTGGGTAAGTGTTCTTTTTCCTCTCTGATTCCGTATTAGCCTGTTGTATTATCAAGGATTAACATAGCATGAAGTTCTTTAAAAGCAATTAGCCTTTATGGATGACTTTGAGATCTCTGATTAGGATAAAATTGTTTCGATAATGGGAATTCTGATGGAGTTTGGTGATCTAAGAGTGAATATTTGACTATCTAGTTGATGAGTTGCCTTGGATTAGTATTTATAATAGTCAAATTTCTATGATGAATGAATGAAGAAGTGCACCTTTTTTTCCATGTCAATTGATTTTCTTCATTCTTTCATTGATTATTGTTGTATTGACACTCATTCCTCAACTTTGACAAGCTTAAAGCATCTTTCAAGTTGGGTAATGTTCTCTTTCATCAGGTGGATTGTCGCTTGTTGTAAAACAATGTTGGTCACCATTTTTAAAGCTATAAGTTTTGGTTAAATATTAAAGAAATACTCCCGAGTCCTAACTTTGCCTTTTGTTTTGTTTTTTTTTTTTAAATAACTTGATACCTTTCAAAAGTTGCAAGATTGCCATTGATTTTTCCTAAATCTTATACCATTGGAGGAGTGGAAATCGGACAAAAGTTGGGACTTTGAATGTTGTGGTGGACTAAAACAGAAATGTTGATTGCCATACAATTTTTGGTCCCAATTTCTGTCATGTTTCCTACTCTAGAGTAATTTAAAAATGTATACGAAAGGTTAACGGTGGTATTACAACTTTCGGAAGAATTGTATTTATTTATATATATTTAAAAACCACATACCTTTCAACTTCAAGAGTTCCAAGGTTACCTTTGACCTTTCATAAACCTTATACCATTGGAATAAAATATTTAGAATATCATGTGGAAATTGGAACCTGAAACGGTGTGGTGTGGCAGCGACCTAGAACAGAAATTTGGATTACCACACCTTTCTGGGTCTCAATCTTCTTCCCAAATTCTGAATGATATCTGCTTCATGGGTAATTTTGAATTGTTTATGCAAGGTCAAGACCCAAGTATGGTATTGCAACTTTTGAAAGAGGGTTTTTTTTATATATGTGTGTGTGTGTTTTTAATTTTATGGAATGGATATAGAGCACTTTTAAAACAAGGGCAAAATTCTGGGGTATTTCTTATGATTTGCGCCTTAGTGTTTAATTTACTTAAGTGGATTTTCATTTCAAGAACTGAGATTCTGTATTAGCTGCATTCTGATTGTTCATCTGGTAACCTTTTGAACTTTTTCTGTATACAATTACAGTACTGGAGGTGCTGGTGGTGGGATTGTTGCCAAGGATGCTTTTGGAAATGATGTTTTTGCAGATGAATGGCTGAAGGCACATGGACCTGGAGACCGAACCCTCACACAAGGCTTGAAGGTACTCTAACTCTTTCACTTTTCTTAATTAATGTTATAAATTCTAGCAACCACAACCCTTGTTGCTTCTCAAAGACCTTATGTTTCTCTGTTTCACATGTTTATTTAACATCAAAGTGGTAATATGATTATTAATCATCTCCCAATGAGATTAGCATATTCATAAAAGAGAAAAATCGAGCATGCATATTTAAAAGAATGTAATCCGAGTATTCAAATTACGAAACTAGATTGGAAAATAAACATCTGATATCATATAATGGAAATGTGGTGCTTGTATATTGAGTTCCTTAGTCTTAATTCGAATAGTAGTGTGCATCTAAAGGCAAACTGATGGTGATGGATTTCAGGGAGATCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCAACATTTGGAATCAATGCAGTTTGCACTCACCTCGGATGTGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTTGTTAGAGGACCTGCACCTCTGGTAATACTTTTCAAAACATTTTTCATGCTGTTGGGACAAGCTGCATCTACTGACTTGTAAGATTATGTGATGATTCGTATTAATTAAATAGAGTTAAAATTTTCTTTGTTGGAACAGTCTCTTGCATTGGTTCATGCTGATGTAGACGAGGGAAAGGTAGTGTTCGTACCGTGGGTTGAAACTGATTTCAGAACTGGCGAGAATCCATGGTGGGCTTAAGCGTCCTTCTCATGTAACATCTCTTCAATTTGAAGCAATTTTTTTTCTTCCATCTCCTCTCAGTTTTCTCCTGTTTGTATATTTTGATTTTGTTGGATGAAATATGTAAAATACAAGACAATTGAATCCTAGGCTTTGCATTGATAAGCTTTGATATTAAATACCTCTCTTCGTTGTTCTACTTTCTCTTCATCTTGTATTCAGTACATGGAATCACTGTGGATTAGCTAGTGTTCAGTTCATGTGCAAATAATATCAGCATTGAATCTTTTTATAAAACTTCCACTCAAGACTCAAGAGGAGCCTAAATTATTTACATCGATGTACCTTCTTGTTTATGATTGTAGAATAAGTCGTCAAGCATTTGATTCGAATTTTGGTTCGTCAAGAGATTCAACTTCAATTCATATTAACA

mRNA sequence

GTTTTATTGTTCTTCAGAAATGAAAAGGGAAAAAAAAAATCATGCGAATTGTGAACTCTGAAGTTTGTGGCCATTTGGAACCGATGTGGCTAATTGCCTTATCTTCTCCCTTTTGTGGACATCAAAATTTAGCAACTTTTCAATACAATCTCTCCAACCACTGATATAACCATTACCCACATTTTAGATTTTCCCCTCCACTCCTTGCTCTGATCCATCCATGGCGTCTTCCACTCTATCTTCTGCAACCCCATCACAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCATCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGTGGTTAAAATTTCTTGTCAAGCTACTAGTATTCCAGCTGATCGAGTCCCGGATATGGATAAAAGGAAGACTATGAATTTGCTTCTTTTGGGTGCCATTGGACTTCCCACTGCTACTATGTTGTATCCTTACACCTATTTTTTCGTCCCTCCTGGTACTGGAGGTGCTGGTGGTGGGATTGTTGCCAAGGATGCTTTTGGAAATGATGTTTTTGCAGATGAATGGCTGAAGGCACATGGACCTGGAGACCGAACCCTCACACAAGGCTTGAAGGGAGATCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCAACATTTGGAATCAATGCAGTTTGCACTCACCTCGGATGTGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTTGTTAGAGGACCTGCACCTCTGTCTCTTGCATTGGTTCATGCTGATGTAGACGAGGGAAAGGTAGTGTTCGTACCGTGGGTTGAAACTGATTTCAGAACTGGCGAGAATCCATGGTGGGCTTAAGCGTCCTTCTCATGTAACATCTCTTCAATTTGAAGCAATTTTTTTTCTTCCATCTCCTCTCAGTTTTCTCCTGTTTGTATATTTTGATTTTGTTGGATGAAATATGTAAAATACAAGACAATTGAATCCTAGGCTTTGCATTGATAAGCTTTGATATTAAATACCTCTCTTCGTTGTTCTACTTTCTCTTCATCTTGTATTCAGTACATGGAATCACTGTGGATTAGCTAGTGTTCAGTTCATGTGCAAATAATATCAGCATTGAATCTTTTTATAAAACTTCCACTCAAGACTCAAGAGGAGCCTAAATTATTTACATCGATGTACCTTCTTGTTTATGATTGTAGAATAAGTCGTCAAGCATTTGATTCGAATTTTGGTTCGTCAAGAGATTCAACTTCAATTCATATTAACA

Coding sequence (CDS)

ATGGCGTCTTCCACTCTATCTTCTGCAACCCCATCACAGTTATGTGCCAGCAGAAGTGCTTTGTTCTGTCCATCTCAAGCCCTTTTGAGGAAACCCAAAAACACTCAAATGGGGGCAAAGGGAAAGGTGGTTAAAATTTCTTGTCAAGCTACTAGTATTCCAGCTGATCGAGTCCCGGATATGGATAAAAGGAAGACTATGAATTTGCTTCTTTTGGGTGCCATTGGACTTCCCACTGCTACTATGTTGTATCCTTACACCTATTTTTTCGTCCCTCCTGGTACTGGAGGTGCTGGTGGTGGGATTGTTGCCAAGGATGCTTTTGGAAATGATGTTTTTGCAGATGAATGGCTGAAGGCACATGGACCTGGAGACCGAACCCTCACACAAGGCTTGAAGGGAGATCCTACCTACCTTGTAGTCGAGAAGGATAAAACGCTTGCAACATTTGGAATCAATGCAGTTTGCACTCACCTCGGATGTGTCGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTTGTTAGAGGACCTGCACCTCTGTCTCTTGCATTGGTTCATGCTGATGTAGACGAGGGAAAGGTAGTGTTCGTACCGTGGGTTGAAACTGATTTCAGAACTGGCGAGAATCCATGGTGGGCTTAA

Protein sequence

MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKAHGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA

Homology

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BLAST of CsGy7G003830 vs. NCBI nr
Match: NP_001267704.1 (cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucumis sativus] >CCJ09121.1 Rieske type ion sulfur subunit (chloroplast) [Cucumis sativus] >KGN43571.1 Cytochrome b6-f complex iron-sulfur subunit [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 1.5e-130
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA
Sbjct: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 227

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BLAST of CsGy7G003830 vs. NCBI nr
Match: XP_008455364.1 (PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Cucumis melo])

HSP 1 Score: 464.2 bits (1193), Expect = 2.6e-127
Identity = 221/227 (97.36%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMGAKGK VKISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDA GNDVFADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVD+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

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BLAST of CsGy7G003830 vs. NCBI nr
Match: ADU05416.1 (chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus])

HSP 1 Score: 460.3 bits (1183), Expect = 3.8e-126
Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGK VKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVD+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

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BLAST of CsGy7G003830 vs. NCBI nr
Match: XP_022953111.1 (cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 459.9 bits (1182), Expect = 5.0e-126
Identity = 219/227 (96.48%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VKI CQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDV ADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVLADEWLKA 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHAD+D+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 227

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BLAST of CsGy7G003830 vs. NCBI nr
Match: XP_022969251.1 (cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 458.4 bits (1178), Expect = 1.4e-125
Identity = 217/227 (95.59%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VK+ CQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKVCCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDV ADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVLADEWLKA 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHAD+D+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 227

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BLAST of CsGy7G003830 vs. TAIR10
Match: AT4G03280.1 (photosynthetic electron transfer C)

HSP 1 Score: 334.0 bits (855), Expect = 7.4e-92
Identity = 170/231 (73.59%), Postives = 185/231 (80.09%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKP--KNTQMGAKGKV-VKISCQATSIPADR 60
           MASS+LS AT  QL +SRSAL   S  L  KP   N QM  K K+ ++ISCQA+SIPADR
Sbjct: 1   MASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADR 60

Query: 61  VPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEW 120
           VPDM+KRKT+NLLLLGA+ LPT  ML PY  FFVP           AKDA GNDV A EW
Sbjct: 61  VPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPXXXXXXXXXTPAKDALGNDVVAAEW 120

Query: 121 LKAHGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCH 180
           LK HGPGDRTLTQGLKGDPTYLVVE DKTLAT+GINAVCTHLGCVVPWN AENKF+CPCH
Sbjct: 121 LKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADVDE-GKVVFVPWVETDFRTGENPWWA 228
           GSQYN QGRVVRGPAPLSLAL HAD+DE GKV+FVPWVETDFRTG+ PWW+
Sbjct: 181 GSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229

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BLAST of CsGy7G003830 vs. TAIR10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 155 VCTHLGCVVPWNAAE-NKFICPCHGSQYNDQGRVVRGPAPLSLAL-VHADVDEGKVV 210
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L +  ++ ++E K++
Sbjct: 214 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 270

[Close]

BLAST of CsGy7G003830 vs. TAIR10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-08
Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 155 VCTHLGCVVPWNAAE-NKFICPCHGSQYNDQGRVVRGPAPLSLAL-VHADVDEGKVV 210
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L +  ++ ++E K++
Sbjct: 216 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 272

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BLAST of CsGy7G003830 vs. Swiss-Prot
Match: sp|P26291|UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum OX=3888 GN=petC PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 4.2e-100
Identity = 177/230 (76.96%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKG-KVVKISCQATSIPADRVP 60
           M+S+TLS  TPSQLC+ +S + CPS ALL KP  TQM  +G K +KI+CQATSIPADRVP
Sbjct: 1   MSSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVP 60

Query: 61  DMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLK 120
           DM KRKT+NLLLLGA+ LPTA ML PY  F VPPG+G + GG VAKDA GNDV A EWLK
Sbjct: 61  DMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLK 120

Query: 121 AHGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGS 180
            H PGDRTLTQGLKGDPTYLVVEKD+TLATF INAVCTHLGCVVP+N AENKFICPCHGS
Sbjct: 121 THAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGS 180

Query: 181 QYNDQGRVVRGPAPLSLALVHAD--VDEGKVVFVPWVETDFRTGENPWWA 228
           QYNDQGRVVRGPAPLSLAL H D  V++GKVVFVPWVETDFRTG+ PWW+
Sbjct: 181 QYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230

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BLAST of CsGy7G003830 vs. Swiss-Prot
Match: sp|P08980|UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea OX=3562 GN=petC PE=1 SV=2)

HSP 1 Score: 359.8 bits (922), Expect = 2.3e-98
Identity = 171/229 (74.67%), Postives = 192/229 (83.84%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKV--VKISCQATSIPADRV 60
           MAS TLSSATPSQLC+S++ +F PS AL +  +   + +K ++  +K++CQATSIPAD V
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 61  PDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWL 120
           PDM KR+T+NLLLLGA+ LPT  ML PY  FFVPPG G   GG +AKDA GNDV A EWL
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 121 KAHGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHG 180
           K H PGDRTLTQGLKGDPTYLVVE DKTLATFGINAVCTHLGCVVP+NAAENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180

Query: 181 SQYNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           SQYN+QGRVVRGPAPLSLAL H DVD+GKVVFVPW ETDFRTGE PWW+
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229

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BLAST of CsGy7G003830 vs. Swiss-Prot
Match: sp|P30361|UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum OX=4097 GN=petC1 PE=2 SV=2)

HSP 1 Score: 348.6 bits (893), Expect = 5.3e-95
Identity = 174/230 (75.65%), Postives = 189/230 (82.17%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPK--NTQMGAKGKVVKISCQATSIPA-DR 60
           MASSTLS  T  QLC+S+S L   SQ LL KP   N+    K K +K+ C ATSIPA DR
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDR 60

Query: 61  VPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEW 120
           VPDM+KR  MNLLLLGA+ LPTA ML PY  FFVPPG+GG  GG  AKDA GNDV A EW
Sbjct: 61  VPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEW 120

Query: 121 LKAHGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCH 180
           LK H PG+RTLTQGLKGDPTYLVVE D TLAT+GINAVCTHLGCVVP+NAAENKFICPCH
Sbjct: 121 LKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           GSQYN+QGRVVRGPAPLSLAL HAD+D+GKVVFVPWVETDFRTGE+PWWA
Sbjct: 181 GSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228

[Close]

BLAST of CsGy7G003830 vs. Swiss-Prot
Match: sp|Q69GY7|UCRIA_SOLTU (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum OX=4113 GN=petC PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 9.0e-95
Identity = 169/230 (73.48%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPK--NTQMGAKGKVVKISCQATSIPA-DR 60
           MASSTLS  TPSQLC+S+S +   SQALL KP   N     K K +K  C A SIPA DR
Sbjct: 1   MASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMKINGHGMGKDKRMKAKCMAASIPADDR 60

Query: 61  VPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEW 120
           VPDM+KR  MNLLLLGA+ LPT  ML PY  FF PPG+GG   G +AKDA GNDV   EW
Sbjct: 61  VPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTEW 120

Query: 121 LKAHGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCH 180
           LK H PG RTLTQGLKGDPTYLVVE D TLAT+GINAVCTHLGCVVPWN AENKFICPCH
Sbjct: 121 LKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           GSQYN+QG+VVRGPAPLSLAL HAD+D+GKVVFVPWVETDFRTG++PWWA
Sbjct: 181 GSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA 230

[Close]

BLAST of CsGy7G003830 vs. Swiss-Prot
Match: sp|Q02585|UCRIB_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacum OX=4097 GN=petC2 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-94
Identity = 173/230 (75.22%), Postives = 187/230 (81.30%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPK--NTQMGAKGKVVKISCQATSIPA-DR 60
           MASSTLS  T  QLC+S+S L   SQ LL KP   N+    K K +K+ C ATSIPA DR
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLLKPMKINSHGLGKDKRMKVKCMATSIPADDR 60

Query: 61  VPDMDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEW 120
           VPDM+KR  MNLLLLGA+ LPTA ML PY  FF PPG+GG  GG  AKDA GNDV A EW
Sbjct: 61  VPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIASEW 120

Query: 121 LKAHGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCH 180
           LK H PG+RTLTQGLKGDPTYLVVE D TLAT+GINAVCTHLGCVVP+NAAENKFICPCH
Sbjct: 121 LKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           GSQYN+QGRVVRGPAPLSLAL HAD+D+GKVVFVPWVETDFRTGE PWWA
Sbjct: 181 GSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEAPWWA 228

[Close]

BLAST of CsGy7G003830 vs. TrEMBL
Match: tr|I7K435|I7K435_CUCSA (Cytochrome b6-f complex iron-sulfur subunit OS=Cucumis sativus OX=3659 GN=PetC PE=2 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 9.8e-131
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA
Sbjct: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of CsGy7G003830 vs. TrEMBL
Match: tr|A0A1S3C1Z0|A0A1S3C1Z0_CUCME (Cytochrome b6-f complex iron-sulfur subunit OS=Cucumis melo OX=3656 GN=LOC103495550 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.7e-127
Identity = 221/227 (97.36%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPKNTQMGAKGK VKISCQATSIPADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDA GNDVFADEWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVD+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of CsGy7G003830 vs. TrEMBL
Match: tr|E7E844|E7E844_CITLA (Cytochrome b6-f complex iron-sulfur subunit OS=Citrullus lanatus OX=3654 GN=PetC PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 2.5e-126
Identity = 219/227 (96.48%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGK VKISCQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GNDV A+EWLKA
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGL+GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLALVHADVD+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]

BLAST of CsGy7G003830 vs. TrEMBL
Match: tr|A0A067KV04|A0A067KV04_JATCU (Cytochrome b6-f complex iron-sulfur subunit OS=Jatropha curcas OX=180498 GN=JCGZ_05119 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 7.1e-105
Identity = 181/227 (79.74%), Postives = 199/227 (87.67%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MASSTLSSATPSQLC+S+S +F P+ A+  KP  T M  + + ++++CQATSIPADRVPD
Sbjct: 1   MASSTLSSATPSQLCSSKSGIFSPTHAMFVKPTRTHMMTRDRAMRLTCQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           M KR+ MNLLLLGA+ LPT  ML PY  FFVP G GGAGGG VAKDA GNDV AD+WLK 
Sbjct: 61  MGKRQLMNLLLLGALSLPTGYMLVPYGAFFVPSGAGGAGGGTVAKDALGNDVIADQWLKT 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLKGDPTYLVVEKD+TLAT+GINAVCTHLGCVVPWNAAE KFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNAAEKKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLAL HADVD+GKVVFVPWVETDFRTGE+PWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALAHADVDDGKVVFVPWVETDFRTGEDPWWA 227

[Close]

BLAST of CsGy7G003830 vs. TrEMBL
Match: tr|A0A0S3SHE1|A0A0S3SHE1_PHAAN (Cytochrome b6-f complex iron-sulfur subunit OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G091300 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.6e-104
Identity = 180/227 (79.30%), Postives = 197/227 (86.78%), Query Frame = 0


Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60
           MAS+TLS  TPSQLC+ +S +FCPSQALL KP   QM  K K +KI+CQATSIPADRVPD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFCPSQALLVKPMKRQMMGKSKGMKIACQATSIPADRVPD 60

Query: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120
           M KR+ +NLLLLGAI LP+A ML PYTYFFVPPG+G + GG VAKDA GNDV A+ WLK 
Sbjct: 61  MGKRQLLNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKT 120

Query: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
           HGPGDRTLTQGLKGDPTYLVVEKD+TLAT+ INAVCTHLGCVVPWN AE KFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNTAEKKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 228
           YNDQGRVVRGPAPLSLAL H D+D+GKVVFVPWVETDFRTG+ PWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227

The following BLAST results are available for this feature:

BLAST of CsGy7G003830 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267704.1	1.5e-130	100.00	cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucumis sativus...	[more]
XP_008455364.1	2.6e-127	97.36	PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Cucumis m...	[more]
ADU05416.1	3.8e-126	96.48	chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus]	[more]
XP_022953111.1	5.0e-126	96.48	cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucurbita mosch...	[more]
XP_022969251.1	1.4e-125	95.59	cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucurbita maxim...	[more]

BLAST of CsGy7G003830 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03280.1	7.4e-92	73.59	photosynthetic electron transfer C	[more]
AT5G13430.1	1.3e-08	43.86	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13440.1	1.3e-08	43.86	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]

BLAST of CsGy7G003830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P26291\|UCRIA_PEA	4.2e-100	76.96	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum OX=3...	[more]
sp\|P08980\|UCRIA_SPIOL	2.3e-98	74.67	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea ...	[more]
sp\|P30361\|UCRIA_TOBAC	5.3e-95	75.65	Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacu...	[more]
sp\|Q69GY7\|UCRIA_SOLTU	9.0e-95	73.48	Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum ...	[more]
sp\|Q02585\|UCRIB_TOBAC	1.5e-94	75.22	Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic OS=Nicotiana tabacu...	[more]

BLAST of CsGy7G003830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|I7K435\|I7K435_CUCSA	9.8e-131	100.00	Cytochrome b6-f complex iron-sulfur subunit OS=Cucumis sativus OX=3659 GN=PetC P...	[more]
tr\|A0A1S3C1Z0\|A0A1S3C1Z0_CUCME	1.7e-127	97.36	Cytochrome b6-f complex iron-sulfur subunit OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
tr\|E7E844\|E7E844_CITLA	2.5e-126	96.48	Cytochrome b6-f complex iron-sulfur subunit OS=Citrullus lanatus OX=3654 GN=PetC...	[more]
tr\|A0A067KV04\|A0A067KV04_JATCU	7.1e-105	79.74	Cytochrome b6-f complex iron-sulfur subunit OS=Jatropha curcas OX=180498 GN=JCGZ...	[more]
tr\|A0A0S3SHE1\|A0A0S3SHE1_PHAAN	1.6e-104	79.30	Cytochrome b6-f complex iron-sulfur subunit OS=Vigna angularis var. angularis OX...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
GO:0009496	plastoquinol--plastocyanin reductase activity
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0042651	thylakoid membrane
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR023960	Cyt_b6_f_Rieske
IPR014349	Rieske_Fe-S_prot
IPR036922	Rieske_2Fe-2S_sf
IPR014909	Cyt_b6-f_cplx_Fe-S_su
IPR017941	Rieske_2Fe-2S
IPR005805	Rieske_Fe-S_prot_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0015979	photosynthesis
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009512	cytochrome b6f complex
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0009496	plastoquinol--plastocyanin reductase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G003830.1	CsGy7G003830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 172..184 score: 61.15 coord: 184..196 score: 65.0 coord: 151..162 score: 67.08
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 133..196 e-value: 6.8E-12 score: 45.1
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 114..210 score: 21.994
None	No IPR available	GENE3D	G3DSA:1.20.5.700		coord: 50..92 e-value: 5.6E-16 score: 60.0
None	No IPR available	CDD	cd03471	Rieske_cytochrome_b6f	coord: 102..227 e-value: 5.12936E-92 score: 268.079
IPR014909	Cytochrome b6-f complex Fe-S subunit	PFAM	PF08802	CytB6-F_Fe-S	coord: 56..94 e-value: 5.0E-19 score: 68.0
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	G3DSA:2.102.10.10		coord: 93..227 e-value: 3.7E-46 score: 158.1
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	SSF50022	ISP domain	coord: 56..226
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 41..223
IPR023960	Cytochrome b6-f complex iron-sulfur subunit	PANTHER	PTHR10134:SF5	CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTIC	coord: 41..223
IPR023960	Cytochrome b6-f complex iron-sulfur subunit	HAMAP	MF_01335	Cytb6_f_Rieske	coord: 50..227 score: 39.309

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G003830	Cla007717	Watermelon (97103) v1	cgybwmB558
CsGy7G003830	Csa7G046100	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G003830	MELO3C018775	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G003830	ClCG02G001400	Watermelon (Charleston Gray)	cgybwcgB506
CsGy7G003830	CSPI07G04200	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G003830	CmaCh11G018510	Cucurbita maxima (Rimu)	cgybcmaB896
CsGy7G003830	CmaCh19G009550	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G003830	CmoCh11G019250	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G003830	CmoCh19G009850	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G003830	Lsi11G015050	Bottle gourd (USVL1VR-Ls)	cgyblsiB462
CsGy7G003830	Cp4.1LG04g03330	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G003830	Cp4.1LG15g07690	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G003830	MELO3C018775.2	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G003830	CsaV3_7G004050	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G003830	Cla97C02G027850	Watermelon (97103) v2	cgybwmbB502
CsGy7G003830	Bhi05G001564	Wax gourd	cgybwgoB633
CsGy7G003830	Carg19095	Silver-seed gourd	carcgybB0717
CsGy7G003830	Carg19207	Silver-seed gourd	carcgybB0864

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G003830	Bottle gourd (USVL1VR-Ls)	cgyblsiB457
CsGy7G003830	Cucumber (Gy14) v2	cgybcgybB153
CsGy7G003830	Cucurbita maxima (Rimu)	cgybcmaB909
CsGy7G003830	Cucurbita maxima (Rimu)	cgybcmaB960
CsGy7G003830	Cucurbita moschata (Rifu)	cgybcmoB892
CsGy7G003830	Cucurbita moschata (Rifu)	cgybcmoB943
CsGy7G003830	Cucurbita pepo (Zucchini)	cgybcpeB973
CsGy7G003830	Watermelon (Charleston Gray)	cgybwcgB497
CsGy7G003830	Wild cucumber (PI 183967)	cgybcpiB299
CsGy7G003830	Silver-seed gourd	carcgybB0032
CsGy7G003830	Silver-seed gourd	carcgybB0641
CsGy7G003830	Cucumber (Chinese Long) v3	cgybcucB311
CsGy7G003830	Wax gourd	cgybwgoB655