Cp4.1LG15g07690 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g07690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCytochrome b6-f complex iron-sulfur subunit
LocationCp4.1LG15 : 7912603 .. 7915052 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCTTATCTAGTCCCTTTTGTGGTCATCAAAATTCAGCTCACAATCTCTCAAATCTCAGCGCCACTCACTGATATAACGTTAGTTATTGAGAAATTCCGTCCACTCTTTGCTGTGATCCATCCATGGCGTCCTCCACTCTATCTTCTGCAACTCCCTCACAGGTAGGTAGCGGTAATTTGTTGATTGAAGTTCCATGATGTTGTAAGGAACTTGAAATTTGTTGCCCATTATTGATGATGTTGTTGTTCAGCTATGCGCCAGTAGAAGTGCTTTGTTCTGTCCCTCGCAAGCGCTGTTGAGGAAACCCAAGAGCGCTCAAATGGGGGCGAAGGGAAAGGGCGTTAAGATCTGTTGTCAAGCCACTAGTATTTCGGCTGATCGAGTGCCGGATATGGGTAAAAGGAAGACCATGAATTTGCTTCTGTTGGGTGCTATTGGCCTTCCCACTGCTACCATGTTGTATCCTTACACCTATTTCTTTGTCCCTCCTGGGTAATTCTCCTTTCTTCTGCTGTATTATCAAGAACTAGCATGATCTTGAGAATGATCTTGAGATGTCTGATTAGGGGAAAATTGTGTCACTGATGGGAATTAGATGGAGTTTGGTAATATTAGTGTTGATAATAGCCAATTTTTCATCTCAGTGTGTGCTGCTATGTCTATACAATTGAGGTTAAAGAACTGAGATTCTGTACTTGCTGCATTCTAATTGTTGATTTGGTAACTTTTTGAACATGTTCTGTATACAATTACAGTACTGGAGGTGCTGGTGGTGGAATTGTTGCCAAGGATGCTTTTGGAAATGATGTTCATGCAGATGAATGGCTGAAGGCACATGGCCCTGGAGACCGAACCCTCACACAGGGGCTCAAGGTACTATAACTCTCTCAGGGCATGTTTGGATGTGGCTGTGAAATAGTTAAAATCGTTTTTTATGGCGTTGATTGTTAGACCAACACGACTCTCCACAATAGTATGATATTGTCCACTTTGAGTATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCTAAAGGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACTTACGATCTTCCACTAAATTAACCAATGTGGGACACTCACTCCCAATAAACCTCAACATTGATAATCTACAACCGTTCAAGCCCACTGTCATTAGATATTGTCTTCTTTGGACTTTCTTTTTCAAGCTTCCCTTCAAAGTTTTTAAAACGCTGTGTTTAGGAAGAGATTTCCACACCCTTGTAAAAAGTGTTTTGTTCCTCTCTCCAACCGAGGTAGGATTTCCACACGTCCTTGCTGGCACTCGTTCCCTTCTCCAATCAACATGGGACCTCTCAATCTCCAACCGATGTAGGGTCTCACAATCCACTCCCTTTAGGGCCAGCGTCCTCGCTGGCACTCGTTCTCTTCTCCAACCAATGTAGGATCTCACTATCCATTCCCCTTCGAAGCCTAGCATCATCCTTGCTAGCACACCGCCTCGTGTCCACTCCCTTCAGAGCTCAGCCTCCTCGCTAACACATCACCCGATGTCTGACTCTTATACCATCTATAATAGCACAAGTCCATCGCCAGCAGATGTGGTCTGTGTTTGGTCTGTTATGTATCACCATCAGTCTCACGGTTAAAAAACGCGTCTATTAGGGAAAGATTTCCCCACCCTTATGAAAAAAAATGCTTTGTTCTACTCTCCCACCGACGTAGGATCTCACAAAATCACACTTTGAAACCTAGCGAATGATTAATGCATATTTCAAATTCATTTTGAATATGATAAAAGCTCCAAAACATGCCTAATGAATGTTATTATGCTTGGGAAGATGAACAAGTAGTATATGATGGATTTCAGGGAGACCCTACCTACCTTGTAGTGGAGAAGGATAAAACACTTGCGACGTTTGGAATCAACGCCGTATGCACTCACCTTGGATGCGTGGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTGGTCAGAGGCCCTGCACCTCTAGTAATACTTCTTCAAACCCTTTGCTCATTTCAAGCCTTTAAACAACCAACAAACTTCAGATTATATGTTGATGCCATTAACTAAACAGAGTTCAAATTTTGTTTGTTGGGACAGTCTCTTGCATTGGTTCATGCTGATATAGACGACGGGAAGGTCGTGTTCGTTCCTTGGGTCGAAACCGATTTCAGAACTGGCGAAAATCCATGGTGGGCTTAAGCCTCCTCCTCCATGTAACATCTTTCCACATCCATCCATATTCTCCTGTTGTATATTTTGGTTTCAATTCATATACAAGACGACTCAATCTTAGGATTGTATCGATAAGCTTTGATAAGTACCATTATGGTGTTCTACTTTATGAATCACGACTATTTACAAAGGTATGATATTGTCCCCTTTAAGCA

mRNA sequence

TGCCTTATCTAGTCCCTTTTGTGGTCATCAAAATTCAGCTCACAATCTCTCAAATCTCAGCGCCACTCACTGATATAACGTTAGTTATTGAGAAATTCCGTCCACTCTTTGCTGTGATCCATCCATGGCGTCCTCCACTCTATCTTCTGCAACTCCCTCACAGCTATGCGCCAGTAGAAGTGCTTTGTTCTGTCCCTCGCAAGCGCTGTTGAGGAAACCCAAGAGCGCTCAAATGGGGGCGAAGGGAAAGGGCGTTAAGATCTGTTGTCAAGCCACTAGTATTTCGGCTGATCGAGTGCCGGATATGGGTAAAAGGAAGACCATGAATTTGCTTCTGTTGGGTGCTATTGGCCTTCCCACTGCTACCATGTTGTATCCTTACACCTATTTCTTTGTCCCTCCTGGTACTGGAGGTGCTGGTGGTGGAATTGTTGCCAAGGATGCTTTTGGAAATGATGGAGACCCTACCTACCTTGTAGTGGAGAAGGATAAAACACTTGCGACGTTTGGAATCAACGCCGTATGCACTCACCTTGGATGCGTGGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTGGTCAGAGGCCCTGCACCTCTATCTCTTGCATTGGTTCATGCTGATATAGACGACGGGAAGGTCGTGTTCGTTCCTTGGGTCGAAACCGATTTCAGAACTGGCGAAAATCCATGGTGGGCTTAAGCCTCCTCCTCCATGTAACATCTTTCCACATCCATCCATATTCTCCTGTTGTATATTTTGGTTTCAATTCATATACAAGACGACTCAATCTTAGGATTGTATCGATAAGCTTTGATAAGTACCATTATGGTGTTCTACTTTATGAATCACGACTATTTACAAAGGTATGATATTGTCCCCTTTAAGCA

Coding sequence (CDS)

ATGGCGTCCTCCACTCTATCTTCTGCAACTCCCTCACAGCTATGCGCCAGTAGAAGTGCTTTGTTCTGTCCCTCGCAAGCGCTGTTGAGGAAACCCAAGAGCGCTCAAATGGGGGCGAAGGGAAAGGGCGTTAAGATCTGTTGTCAAGCCACTAGTATTTCGGCTGATCGAGTGCCGGATATGGGTAAAAGGAAGACCATGAATTTGCTTCTGTTGGGTGCTATTGGCCTTCCCACTGCTACCATGTTGTATCCTTACACCTATTTCTTTGTCCCTCCTGGTACTGGAGGTGCTGGTGGTGGAATTGTTGCCAAGGATGCTTTTGGAAATGATGGAGACCCTACCTACCTTGTAGTGGAGAAGGATAAAACACTTGCGACGTTTGGAATCAACGCCGTATGCACTCACCTTGGATGCGTGGTGCCATGGAATGCAGCTGAGAACAAATTCATCTGCCCTTGCCATGGATCCCAATACAACGATCAAGGCAGGGTGGTCAGAGGCCCTGCACCTCTATCTCTTGCATTGGTTCATGCTGATATAGACGACGGGAAGGTCGTGTTCGTTCCTTGGGTCGAAACCGATTTCAGAACTGGCGAAAATCCATGGTGGGCTTAA

Protein sequence

MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA
Homology
[Close]
BLAST of Cp4.1LG15g07690 vs. Swiss-Prot
Match: UCRIA_PEA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=petC PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 8.3e-84
Identity = 158/230 (68.70%), Postives = 175/230 (76.09%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKG-KGVKICCQATSISADRVP 60
           M+S+TLS  TPSQLC+ +S + CPS ALL KP   QM  +G KG+KI CQATSI ADRVP
Sbjct: 1   MSSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVP 60

Query: 61  DMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND-------- 120
           DM KRKT+NLLLLGA+ LPTA ML PY  F VPPG+G + GG VAKDA GND        
Sbjct: 61  DMSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLK 120

Query: 121 --------------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGS 180
                         GDPTYLVVEKD+TLATF INAVCTHLGCVVP+N AENKFICPCHGS
Sbjct: 121 THAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGS 180

Query: 181 QYNDQGRVVRGPAPLSLALVHAD--IDDGKVVFVPWVETDFRTGENPWWA 206
           QYNDQGRVVRGPAPLSLAL H D  ++DGKVVFVPWVETDFRTG+ PWW+
Sbjct: 181 QYNDQGRVVRGPAPLSLALAHCDVGVEDGKVVFVPWVETDFRTGDAPWWS 230

[Close]
BLAST of Cp4.1LG15g07690 vs. Swiss-Prot
Match: UCRIA_SPIOL (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea GN=petC PE=1 SV=2)

HSP 1 Score: 304.3 bits (778), Expect = 1.0e-81
Identity = 153/229 (66.81%), Postives = 172/229 (75.11%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGK--GVKICCQATSISADRV 60
           MAS TLSSATPSQLC+S++ +F PS AL +  +   + +K +  G+K+ CQATSI AD V
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 61  PDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND------- 120
           PDM KR+T+NLLLLGA+ LPT  ML PY  FFVPPG G   GG +AKDA GND       
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120

Query: 121 ---------------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHG 180
                          GDPTYLVVE DKTLATFGINAVCTHLGCVVP+NAAENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180

Query: 181 SQYNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           SQYN+QGRVVRGPAPLSLAL H D+DDGKVVFVPW ETDFRTGE PWW+
Sbjct: 181 SQYNNQGRVVRGPAPLSLALAHCDVDDGKVVFVPWTETDFRTGEAPWWS 229

[Close]
BLAST of Cp4.1LG15g07690 vs. Swiss-Prot
Match: UCRIA_SOLTU (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum GN=petC PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.7e-79
Identity = 155/231 (67.10%), Postives = 167/231 (72.29%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQ---MGAKGKGVKICCQATSISAD- 60
           MASSTLS  TPSQLC+S+S +   SQALL KP       MG K K +K  C A SI AD 
Sbjct: 1   MASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMKINGHGMG-KDKRMKAKCMAASIPADD 60

Query: 61  RVPDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND----- 120
           RVPDM KR  MNLLLLGA+ LPT  ML PY  FF PPG+GG   G +AKDA GND     
Sbjct: 61  RVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVTE 120

Query: 121 -----------------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPC 180
                            GDPTYLVVE D TLAT+GINAVCTHLGCVVPWN AENKFICPC
Sbjct: 121 WLKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICPC 180

Query: 181 HGSQYNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           HGSQYN+QG+VVRGPAPLSLAL HADIDDGKVVFVPWVETDFRTG++PWWA
Sbjct: 181 HGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGDSPWWA 230

[Close]
BLAST of Cp4.1LG15g07690 vs. Swiss-Prot
Match: UCRIA_TOBAC (Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacum GN=petC1 PE=2 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 1.8e-78
Identity = 157/230 (68.26%), Postives = 167/230 (72.61%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKG--VKICCQATSISAD-R 60
           MASSTLS  T  QLC+S+S L   SQ LL KP        GK   +K+ C ATSI AD R
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDR 60

Query: 61  VPDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND------ 120
           VPDM KR  MNLLLLGA+ LPTA ML PY  FFVPPG+GG  GG  AKDA GND      
Sbjct: 61  VPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIASEW 120

Query: 121 ----------------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCH 180
                           GDPTYLVVE D TLAT+GINAVCTHLGCVVP+NAAENKFICPCH
Sbjct: 121 LKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           GSQYN+QGRVVRGPAPLSLAL HADIDDGKVVFVPWVETDFRTGE+PWWA
Sbjct: 181 GSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 228

[Close]
BLAST of Cp4.1LG15g07690 vs. Swiss-Prot
Match: UCRIA_FRIAG (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrestis GN=petC PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.3e-78
Identity = 152/230 (66.09%), Postives = 172/230 (74.78%), Query Frame = 1 

Query: 1   MASSTLSSA-TPSQLCASRSALFCPSQALLRKPKSAQMGAKGK-GVKICCQATSISADRV 60
           MAS+TLS+  TPSQL A+++  + PS+ALL K        K     K+ CQATSI ADRV
Sbjct: 1   MASTTLSATPTPSQLSAAKNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRV 60

Query: 61  PDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGN-------- 120
           PDMGKR+TMNLLLLGA+ LPTA ML PY  FFVPP +GG GGGIVAKDA GN        
Sbjct: 61  PDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWL 120

Query: 121 --------------DGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHG 180
                          GDPTYLVVE D++LAT+GINAVCTHLGCVVPWN AENKF+CPCHG
Sbjct: 121 KTHGPGDRTLAQGLRGDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKAENKFLCPCHG 180

Query: 181 SQYNDQGRVVRGPAPLSLALVHADI-DDGKVVFVPWVETDFRTGENPWWA 206
           SQYN+QG+VVRGPAPLSLAL H DI ++GKVVFVPWVETDFRTGENPWW+
Sbjct: 181 SQYNNQGKVVRGPAPLSLALSHCDISEEGKVVFVPWVETDFRTGENPWWS 230

[Close]
BLAST of Cp4.1LG15g07690 vs. TrEMBL
Match: E7E844_CITLA (Cytochrome b6-f complex iron-sulfur subunit OS=Citrullus lanatus GN=PetC PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 5.7e-108
Identity = 197/227 (86.78%), Postives = 200/227 (88.11%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VKI CQATSI ADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND--------- 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GND         
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120

Query: 121 -------------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLALVHAD+DDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]
BLAST of Cp4.1LG15g07690 vs. TrEMBL
Match: I7K435_CUCSA (Cytochrome b6-f complex iron-sulfur subunit OS=Cucumis sativus GN=PetC PE=2 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-107
Identity = 197/227 (86.78%), Postives = 200/227 (88.11%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VKI CQATSI ADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND--------- 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND         
Sbjct: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120

Query: 121 -------------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLALVHAD+D+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 227

[Close]
BLAST of Cp4.1LG15g07690 vs. TrEMBL
Match: V7BZ32_PHAVU (Cytochrome b6-f complex iron-sulfur subunit OS=Phaseolus vulgaris GN=PHAVU_005G109400g PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 9.2e-90
Identity = 165/227 (72.69%), Postives = 178/227 (78.41%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MAS+TLS  TPSQLC+ +S +FCPSQALL KP   QM  K KG+KI CQATSISADRVPD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFCPSQALLMKPMKRQMMGKSKGMKIACQATSISADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGN---------- 120
           MGKR+ +NLLLLGAI LP+A ML PYTYFFVPPG+G + GG VAKDA GN          
Sbjct: 61  MGKRQLLNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKT 120

Query: 121 ------------DGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKD+TLATF INAVCTHLGCVVPWN AE KFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNTAEKKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLAL H DIDDGKVVFVPWVETDFRTG+ PWW+
Sbjct: 181 YNDQGRVVRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWS 227

[Close]
BLAST of Cp4.1LG15g07690 vs. TrEMBL
Match: A0A0S3SHE1_PHAAN (Cytochrome b6-f complex iron-sulfur subunit OS=Vigna angularis var. angularis GN=Vigan.07G091300 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.0e-89
Identity = 164/227 (72.25%), Postives = 177/227 (77.97%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MAS+TLS  TPSQLC+ +S +FCPSQALL KP   QM  K KG+KI CQATSI ADRVPD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFCPSQALLVKPMKRQMMGKSKGMKIACQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGN---------- 120
           MGKR+ +NLLLLGAI LP+A ML PYTYFFVPPG+G + GG VAKDA GN          
Sbjct: 61  MGKRQLLNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKT 120

Query: 121 ------------DGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKD+TLAT+ INAVCTHLGCVVPWN AE KFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNTAEKKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLAL H DIDDGKVVFVPWVETDFRTG+ PWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227

[Close]
BLAST of Cp4.1LG15g07690 vs. TrEMBL
Match: A0A0B2RWG7_GLYSO (Cytochrome b6-f complex iron-sulfur subunit OS=Glycine soja GN=glysoja_001320 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.0e-88
Identity = 166/227 (73.13%), Postives = 177/227 (77.97%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MAS+TLS  TPSQLC+ +S +F  SQALL KP   QM  K KG++I CQATSISADRVPD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQATSISADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGN---------- 120
           MGKR+ MNLLLLGAI LPTA ML PYTYFFVPPG+G + GG VAKDA GN          
Sbjct: 61  MGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKA 120

Query: 121 ------------DGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKD+TLATF INAVCTHLGCVVPWN AENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLAL H DIDDGKVVFVPWVETDFRTG+ PWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227

[Close]
BLAST of Cp4.1LG15g07690 vs. TAIR10
Match: AT4G03280.1 (AT4G03280.1 photosynthetic electron transfer C)

HSP 1 Score: 290.8 bits (743), Expect = 6.5e-79
Identity = 156/231 (67.53%), Postives = 169/231 (73.16%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSA--QMGAKGK-GVKICCQATSISADR 60
           MASS+LS AT  QL +SRSAL   S  L  KP     QM  K K G++I CQA+SI ADR
Sbjct: 1   MASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADR 60

Query: 61  VPDMGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGN------- 120
           VPDM KRKT+NLLLLGA+ LPT  ML PY  FFVPPGTGG GGG  AKDA GN       
Sbjct: 61  VPDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEW 120

Query: 121 ---------------DGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCH 180
                           GDPTYLVVE DKTLAT+GINAVCTHLGCVVPWN AENKF+CPCH
Sbjct: 121 LKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCH 180

Query: 181 GSQYNDQGRVVRGPAPLSLALVHADIDD-GKVVFVPWVETDFRTGENPWWA 206
           GSQYN QGRVVRGPAPLSLAL HADID+ GKV+FVPWVETDFRTG+ PWW+
Sbjct: 181 GSQYNAQGRVVRGPAPLSLALAHADIDEAGKVLFVPWVETDFRTGDAPWWS 229

[Close]
BLAST of Cp4.1LG15g07690 vs. TAIR10
Match: AT5G13430.1 (AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 133 VCTHLGCVVPWNAAE-NKFICPCHGSQYNDQGRVVRGPAPLSLAL-VHADIDDGKVV 188
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L +  ++ +++ K++
Sbjct: 214 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 270

[Close]
BLAST of Cp4.1LG15g07690 vs. TAIR10
Match: AT5G13440.1 (AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 133 VCTHLGCVVPWNAAE-NKFICPCHGSQYNDQGRVVRGPAPLSLAL-VHADIDDGKVV 188
           VCTHLGC+   NA +   + CPCHGS Y+  GR+ +GPAP +L +  ++ +++ K++
Sbjct: 216 VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 272

[Close]
BLAST of Cp4.1LG15g07690 vs. NCBI nr
Match: gi|315364830|gb|ADU05416.1| (chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus])

HSP 1 Score: 398.3 bits (1022), Expect = 8.2e-108
Identity = 197/227 (86.78%), Postives = 200/227 (88.11%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VKI CQATSI ADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND--------- 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDA GND         
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDALGNDVLAEEWLKA 120

Query: 121 -------------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKDKTLAT+GINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLRGDPTYLVVEKDKTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLALVHAD+DDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]
BLAST of Cp4.1LG15g07690 vs. NCBI nr
Match: gi|525507328|ref|NP_001267704.1| (cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 397.1 bits (1019), Expect = 1.8e-107
Identity = 197/227 (86.78%), Postives = 200/227 (88.11%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MASSTLSSATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VKI CQATSI ADRVPD
Sbjct: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKVVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND--------- 120
           M KRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGND         
Sbjct: 61  MDKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGNDVFADEWLKA 120

Query: 121 -------------GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLALVHAD+D+GKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDEGKVVFVPWVETDFRTGENPWWA 227

[Close]
BLAST of Cp4.1LG15g07690 vs. NCBI nr
Match: gi|659110697|ref|XP_008455364.1| (PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Cucumis melo])

HSP 1 Score: 394.4 bits (1012), Expect = 1.2e-106
Identity = 195/227 (85.90%), Postives = 198/227 (87.22%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MASSTLS ATPSQLCASRSALFCPSQALLRKPK+ QMGAKGK VKI CQATSI ADRVPD
Sbjct: 1   MASSTLSPATPSQLCASRSALFCPSQALLRKPKNTQMGAKGKEVKISCQATSIPADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGN---------- 120
           MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGG+VAKDA GN          
Sbjct: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGVVAKDALGNDVFADEWLKA 120

Query: 121 ------------DGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLALVHAD+DDGKVVFVPWVETDFRTGENPWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALVHADVDDGKVVFVPWVETDFRTGENPWWA 227

[Close]
BLAST of Cp4.1LG15g07690 vs. NCBI nr
Match: gi|951072343|ref|XP_014491655.1| (PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Vigna radiata var. radiata])

HSP 1 Score: 338.2 bits (866), Expect = 1.0e-89
Identity = 165/227 (72.69%), Postives = 178/227 (78.41%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MAS+TLS  TPSQLC+ +S +FCPSQALL KP   QM  K KGVKI CQATSISADRVPD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFCPSQALLVKPMKRQMMGKSKGVKIACQATSISADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGN---------- 120
           MGKR+ +NLLLLGAI LP+A ML PYTYFFVPPG+G + GG VAKDA GN          
Sbjct: 61  MGKRQLLNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAIGNDVIAENWLKT 120

Query: 121 ------------DGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKD+TLAT+ INAVCTHLGCVVPWN AE KFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNTAEKKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLAL H D+DDGKVVFVPWVETDFRTG+ PWWA
Sbjct: 181 YNDQGRVVRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWA 227

[Close]
BLAST of Cp4.1LG15g07690 vs. NCBI nr
Match: gi|593698894|ref|XP_007149912.1| (hypothetical protein PHAVU_005G109400g [Phaseolus vulgaris])

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-89
Identity = 165/227 (72.69%), Postives = 178/227 (78.41%), Query Frame = 1 

Query: 1   MASSTLSSATPSQLCASRSALFCPSQALLRKPKSAQMGAKGKGVKICCQATSISADRVPD 60
           MAS+TLS  TPSQLC+ +S +FCPSQALL KP   QM  K KG+KI CQATSISADRVPD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFCPSQALLMKPMKRQMMGKSKGMKIACQATSISADRVPD 60

Query: 61  MGKRKTMNLLLLGAIGLPTATMLYPYTYFFVPPGTGGAGGGIVAKDAFGN---------- 120
           MGKR+ +NLLLLGAI LP+A ML PYTYFFVPPG+G + GG VAKDA GN          
Sbjct: 61  MGKRQLLNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKT 120

Query: 121 ------------DGDPTYLVVEKDKTLATFGINAVCTHLGCVVPWNAAENKFICPCHGSQ 180
                        GDPTYLVVEKD+TLATF INAVCTHLGCVVPWN AE KFICPCHGSQ
Sbjct: 121 HGPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNTAEKKFICPCHGSQ 180

Query: 181 YNDQGRVVRGPAPLSLALVHADIDDGKVVFVPWVETDFRTGENPWWA 206
           YNDQGRVVRGPAPLSLAL H DIDDGKVVFVPWVETDFRTG+ PWW+
Sbjct: 181 YNDQGRVVRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWS 227

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g07690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UCRIA_PEA8.3e-8468.70Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum sativum GN=p... [more]
UCRIA_SPIOL1.0e-8166.81Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Spinacia oleracea ... [more]
UCRIA_SOLTU4.7e-7967.10Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Solanum tuberosum ... [more]
UCRIA_TOBAC1.8e-7868.26Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic OS=Nicotiana tabacu... [more]
UCRIA_FRIAG2.3e-7866.09Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Fritillaria agrest... [more]
BLAST of Cp4.1LG15g07690 vs. TrEMBL
Match NameE-valueIdentityDescription
E7E844_CITLA5.7e-10886.78Cytochrome b6-f complex iron-sulfur subunit OS=Citrullus lanatus GN=PetC PE=2 SV... [more]
I7K435_CUCSA1.3e-10786.78Cytochrome b6-f complex iron-sulfur subunit OS=Cucumis sativus GN=PetC PE=2 SV=1[more]
V7BZ32_PHAVU9.2e-9072.69Cytochrome b6-f complex iron-sulfur subunit OS=Phaseolus vulgaris GN=PHAVU_005G1... [more]
A0A0S3SHE1_PHAAN6.0e-8972.25Cytochrome b6-f complex iron-sulfur subunit OS=Vigna angularis var. angularis GN... [more]
A0A0B2RWG7_GLYSO1.0e-8873.13Cytochrome b6-f complex iron-sulfur subunit OS=Glycine soja GN=glysoja_001320 PE... [more]
BLAST of Cp4.1LG15g07690 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G03280.16.5e-7967.53 photosynthetic electron transfer C[more]
AT5G13430.12.1e-0842.11 Ubiquinol-cytochrome C reductase iron-sulfur subunit[more]
AT5G13440.12.1e-0842.11 Ubiquinol-cytochrome C reductase iron-sulfur subunit[more]
BLAST of Cp4.1LG15g07690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|315364830|gb|ADU05416.1|8.2e-10886.78chloroplast Rieske-type ion-sulfur protein [Citrullus lanatus][more]
gi|525507328|ref|NP_001267704.1|1.8e-10786.78cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Cucumis sativus... [more]
gi|659110697|ref|XP_008455364.1|1.2e-10685.90PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Cucumis m... [more]
gi|951072343|ref|XP_014491655.1|1.0e-8972.69PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Vigna rad... [more]
gi|593698894|ref|XP_007149912.1|1.3e-8972.69hypothetical protein PHAVU_005G109400g [Phaseolus vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0009496plastoquinol--plastocyanin reductase activity
GO:00515372 iron, 2 sulfur cluster binding
GO:0016679oxidoreductase activity, acting on diphenols and related substances as donors
Vocabulary: Cellular Component
TermDefinition
GO:0042651thylakoid membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR017941Rieske_2Fe-2S
IPR014909Cyt_b6-f_cplx_Fe-S_su
IPR014349Rieske_Fe-S_prot
IPR005805Rieske_Fe-S_prot_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0015979 photosynthesis
biological_process GO:0022900 electron transport chain
biological_process GO:0010196 nonphotochemical quenching
cellular_component GO:0016020 membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009512 cytochrome b6f complex
cellular_component GO:0009534 chloroplast thylakoid
molecular_function GO:0046872 metal ion binding
molecular_function GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors
molecular_function GO:0009496 plastoquinol--plastocyanin reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g07690.1Cp4.1LG15g07690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 129..140
score: 1.1E-14coord: 162..174
score: 1.1E-14coord: 150..162
score: 1.1
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 1..190
score: 1.1E
IPR014909Cytochrome b6-f complex Fe-S subunitPFAMPF08802CytB6-F_Fe-Scoord: 56..94
score: 2.3
IPR017941Rieske [2Fe-2S] iron-sulphur domainGENE3DG3DSA:2.102.10.10coord: 59..204
score: 1.4
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 117..174
score: 9.2
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROFILEPS51296RIESKEcoord: 112..188
score: 20
IPR017941Rieske [2Fe-2S] iron-sulphur domainunknownSSF50022ISP domaincoord: 56..204
score: 3.93
NoneNo IPR availablePANTHERPTHR10134:SF5CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTICcoord: 1..190
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g07690Cucsa.148060Cucumber (Gy14) v1cgycpeB0392
Cp4.1LG15g07690CmaCh11G018510Cucurbita maxima (Rimu)cmacpeB115
Cp4.1LG15g07690CmaCh19G009550Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g07690CmoCh19G009850Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g07690CmoCh11G019250Cucurbita moschata (Rifu)cmocpeB093
Cp4.1LG15g07690Cla007717Watermelon (97103) v1cpewmB264
Cp4.1LG15g07690Csa7G046100Cucumber (Chinese Long) v2cpecuB257
Cp4.1LG15g07690MELO3C018775Melon (DHL92) v3.5.1cpemeB223
Cp4.1LG15g07690ClCG02G001400Watermelon (Charleston Gray)cpewcgB233
Cp4.1LG15g07690CSPI07G04200Wild cucumber (PI 183967)cpecpiB257
Cp4.1LG15g07690Lsi11G015050Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g07690MELO3C018775.2Melon (DHL92) v3.6.1cpemedB261
Cp4.1LG15g07690CsaV3_7G004050Cucumber (Chinese Long) v3cpecucB0322
Cp4.1LG15g07690Bhi05G001564Wax gourdcpewgoB0318
Cp4.1LG15g07690CsGy7G003830Cucumber (Gy14) v2cgybcpeB910
Cp4.1LG15g07690Carg19207Silver-seed gourdcarcpeB1220
Cp4.1LG15g07690Carg19095Silver-seed gourdcarcpeB1013
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g07690Cp4.1LG04g03330Cucurbita pepo (Zucchini)cpecpeB267
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g07690Cucurbita pepo (Zucchini)cpecpeB275
Cp4.1LG15g07690Cucurbita maxima (Rimu)cmacpeB222
Cp4.1LG15g07690Cucurbita maxima (Rimu)cmacpeB617
Cp4.1LG15g07690Cucurbita maxima (Rimu)cmacpeB658
Cp4.1LG15g07690Cucurbita moschata (Rifu)cmocpeB191
Cp4.1LG15g07690Cucurbita moschata (Rifu)cmocpeB387
Cp4.1LG15g07690Cucurbita moschata (Rifu)cmocpeB428
Cp4.1LG15g07690Cucurbita moschata (Rifu)cmocpeB515
Cp4.1LG15g07690Cucurbita moschata (Rifu)cmocpeB565
Cp4.1LG15g07690Cucurbita moschata (Rifu)cmocpeB609
Cp4.1LG15g07690Wild cucumber (PI 183967)cpecpiB235
Cp4.1LG15g07690Cucumber (Chinese Long) v2cpecuB249
Cp4.1LG15g07690Bottle gourd (USVL1VR-Ls)cpelsiB196
Cp4.1LG15g07690Bottle gourd (USVL1VR-Ls)cpelsiB204
Cp4.1LG15g07690Watermelon (97103) v1cpewmB252
Cp4.1LG15g07690Melon (DHL92) v3.5.1cpemeB216
Cp4.1LG15g07690Silver-seed gourdcarcpeB0041
Cp4.1LG15g07690Silver-seed gourdcarcpeB0914
Cp4.1LG15g07690Cucumber (Chinese Long) v3cpecucB0287
Cp4.1LG15g07690Wax gourdcpewgoB0339
Cp4.1LG15g07690Cucurbita pepo (Zucchini)cpecpeB255