CsGy7G003000 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G003000
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Pentatricopeptide repeat-containing protein, putative
Location	Chr7 : 2360742 .. 2361668 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAAACCACACGAAATAATCCCCTTTTACGCTGCTCTCCTCGACGCCTGCTCCTCCACCAACAACCTCCACACTCTCAAGCAAATCCACGCTCTTACCATAACACTTCATATCTCTCACCACCATTTCATTCGAACCAAGCTCGCTTCAACCTACGCTGCCTGCGCTCAACTCCCACAAGCCACCACCATCTTCTCCTTCGCCACTCGTCGCCCCACCTACCTTTTCAATACTCTCATCAGAGCCCACTCTTCTCTCCGTCTCTTCTCGCAGTCCCTCTCCATTTTCCGCCACATGCTCCTTTCTGGAAAATCCATTGATCGCCATACTCTCCCGCCTGTGCTTAAGTCATGTACCGGCCTCTCCTCCTTGCGCCTTGGCCGCCAGGTTCATGGGGCTCTTCTGATTAATGGCTTCTCTGCAGATTTGCCTAGTTTGAATGCTTTGATTACCATGTATGGCAAATGCGGGGATTTGGGTGTTGCACGGAAGGTGTTTGATGGAATGCCTGAGAGGAATGAGGTGTCGTGGTCTGCTTTGATGGCGGGTTATGGTGTTCATGGGATGTTTGGGGAGGTGTTTAGGTTGTTTGAGAGGATGGTGGAAGAAGGGCAAAAGCCGGATGAACTCACTTTTACATCTCTTCTCACCGCGTGTAGCCATGGAGGGTTGATTGAGAAAGGGAAGGAGTATTTTGGAATGATGAGAATGGAGTTTCATTTGAGGCCTGGATTGCAGCATTATACTTGCATGGTGGATTTGCTTGGGAGATCGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGATCGAGCCTGATGAGGCTTTGTGGGGTGCCATGTTGAGTGCTTGTAGGATTCATGGGAAGGTCGATGTGGCTGATAGGGTGCAAAAACGGTTTATCAAACAACAATGA

mRNA sequence

ATGCCCAAACCACACGAAATAATCCCCTTTTACGCTGCTCTCCTCGACGCCTGCTCCTCCACCAACAACCTCCACACTCTCAAGCAAATCCACGCTCTTACCATAACACTTCATATCTCTCACCACCATTTCATTCGAACCAAGCTCGCTTCAACCTACGCTGCCTGCGCTCAACTCCCACAAGCCACCACCATCTTCTCCTTCGCCACTCGTCGCCCCACCTACCTTTTCAATACTCTCATCAGAGCCCACTCTTCTCTCCGTCTCTTCTCGCAGTCCCTCTCCATTTTCCGCCACATGCTCCTTTCTGGAAAATCCATTGATCGCCATACTCTCCCGCCTGTGCTTAAGTCATGTACCGGCCTCTCCTCCTTGCGCCTTGGCCGCCAGGTTCATGGGGCTCTTCTGATTAATGGCTTCTCTGCAGATTTGCCTAGTTTGAATGCTTTGATTACCATGTATGGCAAATGCGGGGATTTGGGTGTTGCACGGAAGGTGTTTGATGGAATGCCTGAGAGGAATGAGGTGTCGTGGTCTGCTTTGATGGCGGGTTATGGTGTTCATGGGATGTTTGGGGAGGTGTTTAGGTTGTTTGAGAGGATGGTGGAAGAAGGGCAAAAGCCGGATGAACTCACTTTTACATCTCTTCTCACCGCGTGTAGCCATGGAGGGTTGATTGAGAAAGGGAAGGAGTATTTTGGAATGATGAGAATGGAGTTTCATTTGAGGCCTGGATTGCAGCATTATACTTGCATGGTGGATTTGCTTGGGAGATCGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGATCGAGCCTGATGAGGCTTTGTGGGGTGCCATGTTGAGTGCTTGTAGGATTCATGGGAAGGTCGATGTGGCTGATAGGGTGCAAAAACGGTTTATCAAACAACAATGA

Coding sequence (CDS)

ATGCCCAAACCACACGAAATAATCCCCTTTTACGCTGCTCTCCTCGACGCCTGCTCCTCCACCAACAACCTCCACACTCTCAAGCAAATCCACGCTCTTACCATAACACTTCATATCTCTCACCACCATTTCATTCGAACCAAGCTCGCTTCAACCTACGCTGCCTGCGCTCAACTCCCACAAGCCACCACCATCTTCTCCTTCGCCACTCGTCGCCCCACCTACCTTTTCAATACTCTCATCAGAGCCCACTCTTCTCTCCGTCTCTTCTCGCAGTCCCTCTCCATTTTCCGCCACATGCTCCTTTCTGGAAAATCCATTGATCGCCATACTCTCCCGCCTGTGCTTAAGTCATGTACCGGCCTCTCCTCCTTGCGCCTTGGCCGCCAGGTTCATGGGGCTCTTCTGATTAATGGCTTCTCTGCAGATTTGCCTAGTTTGAATGCTTTGATTACCATGTATGGCAAATGCGGGGATTTGGGTGTTGCACGGAAGGTGTTTGATGGAATGCCTGAGAGGAATGAGGTGTCGTGGTCTGCTTTGATGGCGGGTTATGGTGTTCATGGGATGTTTGGGGAGGTGTTTAGGTTGTTTGAGAGGATGGTGGAAGAAGGGCAAAAGCCGGATGAACTCACTTTTACATCTCTTCTCACCGCGTGTAGCCATGGAGGGTTGATTGAGAAAGGGAAGGAGTATTTTGGAATGATGAGAATGGAGTTTCATTTGAGGCCTGGATTGCAGCATTATACTTGCATGGTGGATTTGCTTGGGAGATCGGGGCAAGTGGAAGAAGCAGAGAAGTTGATAATGGAGATGGAGATCGAGCCTGATGAGGCTTTGTGGGGTGCCATGTTGAGTGCTTGTAGGATTCATGGGAAGGTCGATGTGGCTGATAGGGTGCAAAAACGGTTTATCAAACAACAATGA

Protein sequence

MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRVQKRFIKQQ

Homology

[Close]

BLAST of CsGy7G003000 vs. NCBI nr
Match: XP_004144516.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis sativus] >KGN43485.1 hypothetical protein Csa_7G041310 [Cucumis sativus])

HSP 1 Score: 622.9 bits (1605), Expect = 6.0e-175
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT
Sbjct: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
           HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of CsGy7G003000 vs. NCBI nr
Match: XP_008455480.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucumis melo])

HSP 1 Score: 590.1 bits (1520), Expect = 4.3e-165
Identity = 292/308 (94.81%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALL+ACSST NLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLEACSSTKNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QA TIFSFATRRPTYLFN LIRAHSSLRLFSQSLSIFRHMLLSGKS DRHT P VLKSCT
Sbjct: 61  QANTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSGKSTDRHTFPLVLKSCT 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGALLINGFSADLPSLNALITMY KCGDLGVARKVFDGMPERN VSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYSKCGDLGVARKVFDGMPERNGVSWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVFRLFERMV+EGQ+PDELTFTSLLTACSHGGLIEKGKEYF  MRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVKEGQRPDELTFTSLLTACSHGGLIEKGKEYFRTMRMEF 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
           HLRPGLQHYTCMVDLLGR GQVEEAEKLIMEME+EPDEALWGAMLSACRIHG+VDVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRLGQVEEAEKLIMEMEMEPDEALWGAMLSACRIHGRVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of CsGy7G003000 vs. NCBI nr
Match: XP_023520705.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556.2 bits (1432), Expect = 6.9e-155
Identity = 274/307 (89.25%), Postives = 287/307 (93.49%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MPKP +IIPFYAALL ACSST N  TLKQIHALTI L ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QATTIFSFATRRPT+LFN LIRAHSSLRLFSQSLSIFRHML+SGK IDRHTLPPVLKSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLVSGKPIDRHTLPPVLKSCT 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGA++INGFS DLP+LNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVF LFERMVEEGQKPDELTFT+LLTACSHGGLIE+GKEYFGMM+M F
Sbjct: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMKMGF 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
            LRPGL+HYTCMVDLLGR GQVEEAEKLIMEMEIEPDEALWGA+L ACRIHGK +VADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLGACRIHGKAEVADRV 300

Query: 301 QKRFIKQ 308
           Q RF+KQ
Sbjct: 301 QTRFMKQ 307

[Close]

BLAST of CsGy7G003000 vs. NCBI nr
Match: XP_022973156.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 553.9 bits (1426), Expect = 3.4e-154
Identity = 274/309 (88.67%), Postives = 289/309 (93.53%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MPKP +IIPFYAALL ACSST N HTLKQIHALTI L ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHHTLKQIHALTIRLGISHHDFIRTKLASTYAACDHLP 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QATTIFSFATRRPT+LFN LIRAHSSLRLFSQSLSIFRHMLLSGK IDRHTLPPVLKSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRHMLLSGKPIDRHTLPPVLKSCT 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHG ++INGFS DLP+LNALITMYGKCGDLG+ARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGFVVINGFSTDLPNLNALITMYGKCGDLGIARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVF LFERMVEEGQKPDELTFT+LLTACSHGGLIE+GKEYFGMM+M F
Sbjct: 181 LMAGYGVHGMFGEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMKMGF 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLI--MEMEIEPDEALWGAMLSACRIHGKVDVAD 300
           +L+PGL+HYTCMVDLLGR GQVEEAEKLI  MEMEIEPDEALWGA+LSACRIHGK +VAD
Sbjct: 241 NLKPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEMEIEPDEALWGALLSACRIHGKAEVAD 300

Query: 301 RVQKRFIKQ 308
           RVQ RF+KQ
Sbjct: 301 RVQTRFMKQ 309

[Close]

BLAST of CsGy7G003000 vs. NCBI nr
Match: XP_022927399.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 550.8 bits (1418), Expect = 2.9e-153
Identity = 273/307 (88.93%), Postives = 286/307 (93.16%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MPKP +IIPFYAALL ACSST N  TLKQIHALTI L ISHH FIRTKLASTYAAC  LP
Sbjct: 1   MPKPQDIIPFYAALLQACSSTKNHRTLKQIHALTIRLGISHHDFIRTKLASTYAACHHLP 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QATTIFSFATRRPT+LFN LIRAHSSLRLFSQSLSIFR MLLSGK IDRHTLPPV+KSCT
Sbjct: 61  QATTIFSFATRRPTFLFNALIRAHSSLRLFSQSLSIFRRMLLSGKPIDRHTLPPVIKSCT 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGA++INGFS DLP+LNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGAVVINGFSTDLPNLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           LMAGYGVHGMF EVF LFERMVEEGQKPDELTFT+LLTACSHGGLIE+GKEYFGMM+M F
Sbjct: 181 LMAGYGVHGMFDEVFGLFERMVEEGQKPDELTFTALLTACSHGGLIERGKEYFGMMQMGF 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
            LRPGL+HYTCMVDLLGR GQVEEAEKLIMEMEIEPDEALWGA+LSACRIHGK +VADRV
Sbjct: 241 DLRPGLEHYTCMVDLLGRVGQVEEAEKLIMEMEIEPDEALWGALLSACRIHGKGEVADRV 300

Query: 301 QKRFIKQ 308
           Q RF+KQ
Sbjct: 301 QTRFMKQ 307

[Close]

BLAST of CsGy7G003000 vs. TAIR10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-57
Identity = 113/299 (37.79%), Postives = 179/299 (59.87%), Query Frame = 0


Query: 11  YAALLDAC----SSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIF 70
           Y  +L AC     + N+L   K+IHA       S H +I T L   YA    +  A+ +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 71  SFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGK--SIDRHTLPPVLKSCTGLSS 130
                R    ++ +I  ++      ++L  FR M+   K  S +  T+  VL++C  L++
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300

Query: 131 LRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAG 190
           L  G+ +HG +L  G  + LP ++AL+TMYG+CG L V ++VFD M +R+ VSW++L++ 
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360

Query: 191 YGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRP 250
           YGVHG   +  ++FE M+  G  P  +TF S+L ACSH GL+E+GK  F  M  +  ++P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420

Query: 251 GLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRVQKR 304
            ++HY CMVDLLGR+ +++EA K++ +M  EP   +WG++L +CRIHG V++A+R  +R
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479

[Close]

BLAST of CsGy7G003000 vs. TAIR10
Match: AT1G06140.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.3e-54
Identity = 104/296 (35.14%), Postives = 170/296 (57.43%), Query Frame = 0


Query: 14  LLDACSSTNNLHTLKQIHALTI-TLHISHHHFIRTKLASTYAACAQLPQATTIFSFATRR 73
           L+ AC +       K +H ++I    I    +++  +   Y  C  L  A  +F  +  R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275

Query: 74  PTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQVH 133
              ++ TLI   +      ++  +FR ML      ++ TL  +L SC+ L SLR G+ VH
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335

Query: 134 GALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFG 193
           G ++ NG   D  +  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G+F 
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395

Query: 194 EVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYTCM 253
           E    F +M  +   P+ +TF SLL+ACSH G +++G + F  M  ++ + P  +HY CM
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455

Query: 254 VDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRVQKRFIKQQ 309
           VDLLGR+G++ EA+  I  M ++P  + WGA+LSACRIH +VD+A  + ++ +  +
Sbjct: 456 VDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSME 511

[Close]

BLAST of CsGy7G003000 vs. TAIR10
Match: AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 208.4 bits (529), Expect = 6.4e-54
Identity = 104/295 (35.25%), Postives = 169/295 (57.29%), Query Frame = 0


Query: 13  ALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIFSFATRR 72
           +LL ACS   +L   K++H   I   +    F+   + S Y  C +L     +F     +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 73  PTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQVH 132
               +NT+I  +       ++L +FR M+L G  +   ++ PV  +C+ L SLRLGR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 133 GALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFG 192
              L +    D     +LI MY K G +  + KVF+G+ E++  SW+A++ GYG+HG+  
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 193 EVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYTCM 252
           E  +LFE M   G  PD+LTF  +LTAC+H GLI +G  Y   M+  F L+P L+HY C+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740

Query: 253 VDLLGRSGQVEEAEKLIM-EMEIEPDEALWGAMLSACRIHGKVDVADRVQKRFIK 307
           +D+LGR+GQ+++A +++  EM  E D  +W ++LS+CRIH  +++ ++V  +  +
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795

[Close]

BLAST of CsGy7G003000 vs. TAIR10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 3.2e-53
Identity = 108/283 (38.16%), Postives = 162/283 (57.24%), Query Frame = 0


Query: 14  LLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIFSFATRRP 73
           +L+ACS    L   KQ+H+  + L    H F  T L   YA    L  A   F     R 
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387

Query: 74  TYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQVHG 133
             L+ +LI  +       ++L ++R M  +G   +  T+  VLK+C+ L++L LG+QVHG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447

Query: 134 ALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGE 193
             + +GF  ++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   E
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507

Query: 194 VFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYTCMV 253
              LFE M+ EG +PD++TF ++++ACSH G +E+G  YF MM  +  L P + HY CMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567

Query: 254 DLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDV 297
           DLL R+GQ++EA++ I    I+    LW  +LSAC+ HGK ++
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610

[Close]

BLAST of CsGy7G003000 vs. TAIR10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 203.8 bits (517), Expect = 1.6e-52
Identity = 99/286 (34.62%), Postives = 161/286 (56.29%), Query Frame = 0


Query: 11  YAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIFSFAT 70
           + ++L AC     ++  KQIHA  I  +   H ++ + L   Y  C  L  A T+F    
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332

Query: 71  RRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQ 130
           ++    +  ++  +       +++ IF  M  SG   D +TL   + +C  +SSL  G Q
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392

Query: 131 VHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGM 190
            HG  + +G    +   N+L+T+YGKCGD+  + ++F+ M  R+ VSW+A+++ Y   G 
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452

Query: 191 FGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYT 250
             E  +LF++MV+ G KPD +T T +++ACS  GL+EKG+ YF +M  E+ + P + HY+
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512

Query: 251 CMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDV 297
           CM+DL  RSG++EEA + I  M   PD   W  +LSACR  G +++
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558

[Close]

BLAST of CsGy7G003000 vs. Swiss-Prot
Match: sp|Q9STF3|PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.9e-56
Identity = 113/299 (37.79%), Postives = 179/299 (59.87%), Query Frame = 0


Query: 11  YAALLDAC----SSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIF 70
           Y  +L AC     + N+L   K+IHA       S H +I T L   YA    +  A+ +F
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 71  SFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGK--SIDRHTLPPVLKSCTGLSS 130
                R    ++ +I  ++      ++L  FR M+   K  S +  T+  VL++C  L++
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300

Query: 131 LRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAG 190
           L  G+ +HG +L  G  + LP ++AL+TMYG+CG L V ++VFD M +R+ VSW++L++ 
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360

Query: 191 YGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRP 250
           YGVHG   +  ++FE M+  G  P  +TF S+L ACSH GL+E+GK  F  M  +  ++P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420

Query: 251 GLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRVQKR 304
            ++HY CMVDLLGR+ +++EA K++ +M  EP   +WG++L +CRIHG V++A+R  +R
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479

[Close]

BLAST of CsGy7G003000 vs. Swiss-Prot
Match: sp|Q9LND4|PPR14_ARATH (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E61 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.3e-53
Identity = 104/296 (35.14%), Postives = 170/296 (57.43%), Query Frame = 0


Query: 14  LLDACSSTNNLHTLKQIHALTI-TLHISHHHFIRTKLASTYAACAQLPQATTIFSFATRR 73
           L+ AC +       K +H ++I    I    +++  +   Y  C  L  A  +F  +  R
Sbjct: 216 LVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR 275

Query: 74  PTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQVH 133
              ++ TLI   +      ++  +FR ML      ++ TL  +L SC+ L SLR G+ VH
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335

Query: 134 GALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFG 193
           G ++ NG   D  +  + I MY +CG++ +AR VFD MPERN +SWS+++  +G++G+F 
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE 395

Query: 194 EVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYTCM 253
           E    F +M  +   P+ +TF SLL+ACSH G +++G + F  M  ++ + P  +HY CM
Sbjct: 396 EALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455

Query: 254 VDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRVQKRFIKQQ 309
           VDLLGR+G++ EA+  I  M ++P  + WGA+LSACRIH +VD+A  + ++ +  +
Sbjct: 456 VDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSME 511

[Close]

BLAST of CsGy7G003000 vs. Swiss-Prot
Match: sp|Q0WN60|PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 1.2e-52
Identity = 104/295 (35.25%), Postives = 169/295 (57.29%), Query Frame = 0


Query: 13  ALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIFSFATRR 72
           +LL ACS   +L   K++H   I   +    F+   + S Y  C +L     +F     +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 73  PTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQVH 132
               +NT+I  +       ++L +FR M+L G  +   ++ PV  +C+ L SLRLGR+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 133 GALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFG 192
              L +    D     +LI MY K G +  + KVF+G+ E++  SW+A++ GYG+HG+  
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 193 EVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYTCM 252
           E  +LFE M   G  PD+LTF  +LTAC+H GLI +G  Y   M+  F L+P L+HY C+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740

Query: 253 VDLLGRSGQVEEAEKLIM-EMEIEPDEALWGAMLSACRIHGKVDVADRVQKRFIK 307
           +D+LGR+GQ+++A +++  EM  E D  +W ++LS+CRIH  +++ ++V  +  +
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795

[Close]

BLAST of CsGy7G003000 vs. Swiss-Prot
Match: sp|P93005|PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.7e-52
Identity = 108/283 (38.16%), Postives = 162/283 (57.24%), Query Frame = 0


Query: 14  LLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIFSFATRRP 73
           +L+ACS    L   KQ+H+  + L    H F  T L   YA    L  A   F     R 
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387

Query: 74  TYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQVHG 133
             L+ +LI  +       ++L ++R M  +G   +  T+  VLK+C+ L++L LG+QVHG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447

Query: 134 ALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGMFGE 193
             + +GF  ++P  +AL TMY KCG L     VF   P ++ VSW+A+++G   +G   E
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507

Query: 194 VFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYTCMV 253
              LFE M+ EG +PD++TF ++++ACSH G +E+G  YF MM  +  L P + HY CMV
Sbjct: 508 ALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567

Query: 254 DLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDV 297
           DLL R+GQ++EA++ I    I+    LW  +LSAC+ HGK ++
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610

[Close]

BLAST of CsGy7G003000 vs. Swiss-Prot
Match: sp|Q9CAA8|PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.8e-51
Identity = 99/286 (34.62%), Postives = 161/286 (56.29%), Query Frame = 0


Query: 11  YAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLPQATTIFSFAT 70
           + ++L AC     ++  KQIHA  I  +   H ++ + L   Y  C  L  A T+F    
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332

Query: 71  RRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCTGLSSLRLGRQ 130
           ++    +  ++  +       +++ IF  M  SG   D +TL   + +C  +SSL  G Q
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392

Query: 131 VHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAGYGVHGM 190
            HG  + +G    +   N+L+T+YGKCGD+  + ++F+ M  R+ VSW+A+++ Y   G 
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452

Query: 191 FGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEFHLRPGLQHYT 250
             E  +LF++MV+ G KPD +T T +++ACS  GL+EKG+ YF +M  E+ + P + HY+
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512

Query: 251 CMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDV 297
           CM+DL  RSG++EEA + I  M   PD   W  +LSACR  G +++
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEI 558

[Close]

BLAST of CsGy7G003000 vs. TrEMBL
Match: tr|A0A0A0K1F7|A0A0A0K1F7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041310 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 4.0e-175
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT
Sbjct: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
           HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of CsGy7G003000 vs. TrEMBL
Match: tr|A0A1S3C0K0|A0A1S3C0K0_CUCME (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495634 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 2.8e-165
Identity = 292/308 (94.81%), Postives = 297/308 (96.43%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MPKPHEIIPFYAALL+ACSST NLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP
Sbjct: 1   MPKPHEIIPFYAALLEACSSTKNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QA TIFSFATRRPTYLFN LIRAHSSLRLFSQSLSIFRHMLLSGKS DRHT P VLKSCT
Sbjct: 61  QANTIFSFATRRPTYLFNALIRAHSSLRLFSQSLSIFRHMLLSGKSTDRHTFPLVLKSCT 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLSSLRLGRQVHGALLINGFSADLPSLNALITMY KCGDLGVARKVFDGMPERN VSWSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYSKCGDLGVARKVFDGMPERNGVSWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           LMAGYGVHGMFGEVFRLFERMV+EGQ+PDELTFTSLLTACSHGGLIEKGKEYF  MRMEF
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVKEGQRPDELTFTSLLTACSHGGLIEKGKEYFRTMRMEF 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
           HLRPGLQHYTCMVDLLGR GQVEEAEKLIMEME+EPDEALWGAMLSACRIHG+VDVADRV
Sbjct: 241 HLRPGLQHYTCMVDLLGRLGQVEEAEKLIMEMEMEPDEALWGAMLSACRIHGRVDVADRV 300

Query: 301 QKRFIKQQ 309
           QKRFIKQQ
Sbjct: 301 QKRFIKQQ 308

[Close]

BLAST of CsGy7G003000 vs. TrEMBL
Match: tr|A0A2P5FQJ4|A0A2P5FQJ4_9ROSA (Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_041860 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.5e-121
Identity = 215/303 (70.96%), Postives = 257/303 (84.82%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MP     IPFYA+LL+ACSST NL +LK+IHALT+ L IS H +IR KL S+YA CAQL 
Sbjct: 1   MPSSRYDIPFYASLLEACSSTKNLRSLKRIHALTLKLGISSHDYIRAKLVSSYACCAQLH 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QA  +FSFATR+PT+LFNTLIRAHSSL LF QSL IFR MLL+ K IDR TLPPVLKSC 
Sbjct: 61  QANLLFSFATRQPTFLFNTLIRAHSSLNLFVQSLHIFRQMLLAHKPIDRQTLPPVLKSCA 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
            LS+LRLGRQVHGA+L+NGF++DL + NALITMY KCGDL  ARKVFD MP +NE+SWSA
Sbjct: 121 ALSALRLGRQVHGAVLVNGFASDLANSNALITMYAKCGDLVSARKVFDEMPLKNEISWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           LMAGYG+HG+FGEVF LF+RM E G++PD +TFT++LTACSHGGL EKGKEYF MM  EF
Sbjct: 181 LMAGYGMHGIFGEVFLLFDRMAEVGERPDGVTFTTVLTACSHGGLTEKGKEYFEMMEREF 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
            +RP L+HYTCMVD+LGR+G+VEEAEKLI+ M+++PDEALW A+L ACRIHGKV+VA+RV
Sbjct: 241 GVRPVLEHYTCMVDMLGRAGRVEEAEKLILGMKMKPDEALWSALLGACRIHGKVEVAERV 300

Query: 301 QKR 304
           +++
Sbjct: 301 EEK 303

[Close]

BLAST of CsGy7G003000 vs. TrEMBL
Match: tr|A0A2N9FPD7|A0A2N9FPD7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16653 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.1e-120
Identity = 210/303 (69.31%), Postives = 253/303 (83.50%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MP   +I+PFYA LLDACSS  NL  LK +HA TI L IS H FIRTKL S+YA+CAQL 
Sbjct: 1   MPSTRDIVPFYATLLDACSSAKNLQNLKLLHAKTIRLGISPHDFIRTKLISSYASCAQLH 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
           QA  +FSFATR+PTYLFNTLIRA++SL  FS SLS+FR ML + K IDRHTLP VLKSC 
Sbjct: 61  QANVLFSFATRKPTYLFNTLIRAYASLGFFSHSLSVFRRMLFAAKPIDRHTLPVVLKSCA 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLS+LRLGRQVHGA L+NGF+ DL + N+LITMY KCGDL  ARKVFDGMP RNEVSWSA
Sbjct: 121 GLSALRLGRQVHGAALVNGFALDLGNSNSLITMYAKCGDLANARKVFDGMPVRNEVSWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           +M+GYG+HG+F EVF LF+RM+E G++PD +TFT++LTACSHGGL ++G+EYF MM+  +
Sbjct: 181 MMSGYGMHGVFAEVFGLFDRMLEAGERPDGVTFTAVLTACSHGGLTDRGREYFKMMQGRY 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
            +RPGL+HYTCMVD+LGR GQVEEAEKLI  ME+EPDEALW A+L AC+IHGK++VA+RV
Sbjct: 241 AIRPGLEHYTCMVDMLGRVGQVEEAEKLIFGMEMEPDEALWAALLGACKIHGKLEVAERV 300

Query: 301 QKR 304
            ++
Sbjct: 301 AEK 303

[Close]

BLAST of CsGy7G003000 vs. TrEMBL
Match: tr|A0A2I4GR45|A0A2I4GR45_9ROSI (pentatricopeptide repeat-containing protein At4g16470-like OS=Juglans regia OX=51240 GN=LOC109010111 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 4.0e-119
Identity = 213/308 (69.16%), Postives = 253/308 (82.14%), Query Frame = 0


Query: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60
           MP   +IIP  A LLDACSS   L  LK++H  TI L ISHH FIRTKL S+YA+CAQL 
Sbjct: 1   MPATLDIIPLCATLLDACSSAKTLQNLKRLHCRTIILGISHHDFIRTKLVSSYASCAQLH 60

Query: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120
            A  +FSFATR+PT+LFNTLIRAH+SL LFS SL IF  ML+ GKSIDR+TLPPVLKSC 
Sbjct: 61  HANVLFSFATRQPTFLFNTLIRAHASLGLFSHSLFIFHQMLIIGKSIDRYTLPPVLKSCA 120

Query: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180
           GLS+LRLGRQVHG +L+NGF+ D  + NALITMY KCGDL  ARKVFD M  +NE+SWSA
Sbjct: 121 GLSALRLGRQVHGIVLVNGFALDTTNSNALITMYAKCGDLVNARKVFDEMSVKNEISWSA 180

Query: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240
           +MAGYG++GMF EVF LFERMVE G++PD +TFT LLTACSHGGLIE+GKEYF M+    
Sbjct: 181 MMAGYGMNGMFNEVFELFERMVEVGERPDGVTFTVLLTACSHGGLIERGKEYFEMIERRL 240

Query: 241 HLRPGLQHYTCMVDLLGRSGQVEEAEKLIMEMEIEPDEALWGAMLSACRIHGKVDVADRV 300
            +RPGL+HYT MVD+LGR+GQVEEAEKLI+EME+EPDEALWGA+L ACRIHGKV+VA+RV
Sbjct: 241 GVRPGLEHYTSMVDMLGRAGQVEEAEKLILEMEVEPDEALWGALLGACRIHGKVEVAERV 300

Query: 301 QKRFIKQQ 309
            ++  +++
Sbjct: 301 AEKVYEKR 308

The following BLAST results are available for this feature:

BLAST of CsGy7G003000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144516.1	6.0e-175	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-...	[more]
XP_008455480.1	4.3e-165	94.81	PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-...	[more]
XP_023520705.1	6.9e-155	89.25	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
XP_022973156.1	3.4e-154	88.67	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]
XP_022927399.1	2.9e-153	88.93	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur...	[more]

BLAST of CsGy7G003000 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46790.1	1.6e-57	37.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G06140.1	1.3e-54	35.14	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G18485.1	6.4e-54	35.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G33680.1	3.2e-53	38.16	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G68930.1	1.6e-52	34.62	pentatricopeptide (PPR) repeat-containing protein	[more]

BLAST of CsGy7G003000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9STF3\|PP265_ARATH	2.9e-56	37.79	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
sp\|Q9LND4\|PPR14_ARATH	2.3e-53	35.14	Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidop...	[more]
sp\|Q0WN60\|PPR48_ARATH	1.2e-52	35.25	Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX...	[more]
sp\|P93005\|PP181_ARATH	5.7e-52	38.16	Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9CAA8\|PP108_ARATH	2.8e-51	34.62	Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th...	[more]

BLAST of CsGy7G003000 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K1F7\|A0A0A0K1F7_CUCSA	4.0e-175	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041310 PE=4 SV=1	[more]
tr\|A0A1S3C0K0\|A0A1S3C0K0_CUCME	2.8e-165	94.81	pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like OS=Cuc...	[more]
tr\|A0A2P5FQJ4\|A0A2P5FQJ4_9ROSA	2.5e-121	70.96	Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_041860 PE=4 ...	[more]
tr\|A0A2N9FPD7\|A0A2N9FPD7_FAGSY	2.1e-120	69.31	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16653 PE=4 SV=1	[more]
tr\|A0A2I4GR45\|A0A2I4GR45_9ROSI	4.0e-119	69.16	pentatricopeptide repeat-containing protein At4g16470-like OS=Juglans regia OX=5...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G003000.1	CsGy7G003000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 174..221 e-value: 1.5E-11 score: 44.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 147..174 e-value: 5.4E-4 score: 18.0 coord: 249..273 e-value: 1.4E-4 score: 19.8 coord: 176..210 e-value: 7.7E-8 score: 30.1 coord: 212..238 e-value: 0.0015 score: 16.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 76..104 e-value: 0.026 score: 14.7 coord: 249..273 e-value: 4.4E-5 score: 23.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 277..308 score: 6.873
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 209..239 score: 7.892
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 73..107 score: 7.695
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 12.025
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 143..173 score: 8.638
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..275 score: 8.024
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 236..308 e-value: 1.3E-12 score: 50.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 73..235 e-value: 3.1E-35 score: 124.0
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 56..304
None	No IPR available	PANTHER	PTHR24015:SF291	SUBFAMILY NOT NAMED	coord: 56..304

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G003000	Csa7G041310	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G003000	CsaV3_7G003230	Cucumber (Chinese Long) v3	cgybcucB348

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G003000	Cucurbita maxima (Rimu)	cgybcmaB896
CsGy7G003000	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G003000	Cucurbita maxima (Rimu)	cgybcmaB953
CsGy7G003000	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G003000	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G003000	Cucurbita moschata (Rifu)	cgybcmoB937
CsGy7G003000	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G003000	Cucurbita pepo (Zucchini)	cgybcpeB919
CsGy7G003000	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G003000	Cucumber (Chinese Long) v2	cgybcuB296
CsGy7G003000	Cucumber (Chinese Long) v2	cgybcuB328
CsGy7G003000	Bottle gourd (USVL1VR-Ls)	cgyblsiB455
CsGy7G003000	Bottle gourd (USVL1VR-Ls)	cgyblsiB462
CsGy7G003000	Melon (DHL92) v3.5.1	cgybmeB452
CsGy7G003000	Melon (DHL92) v3.5.1	cgybmeB467
CsGy7G003000	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G003000	Melon (DHL92) v3.6.1	cgybmedB453
CsGy7G003000	Melon (DHL92) v3.6.1	cgybmedB464
CsGy7G003000	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G003000	Watermelon (Charleston Gray)	cgybwcgB504
CsGy7G003000	Watermelon (Charleston Gray)	cgybwcgB506
CsGy7G003000	Watermelon (97103) v1	cgybwmB559
CsGy7G003000	Watermelon (97103) v1	cgybwmB565
CsGy7G003000	Watermelon (97103) v1	cgybwmB566
CsGy7G003000	Wild cucumber (PI 183967)	cgybcpiB304
CsGy7G003000	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G003000	Silver-seed gourd	carcgybB0217
CsGy7G003000	Silver-seed gourd	carcgybB1049
CsGy7G003000	Cucumber (Chinese Long) v3	cgybcucB316
CsGy7G003000	Cucumber (Chinese Long) v3	cgybcucB349
CsGy7G003000	Watermelon (97103) v2	cgybwmbB500
CsGy7G003000	Watermelon (97103) v2	cgybwmbB502
CsGy7G003000	Wax gourd	cgybwgoB640
CsGy7G003000	Wax gourd	cgybwgoB641
CsGy7G003000	Wax gourd	cgybwgoB650
CsGy7G003000	Cucumber (Gy14) v2	cgybcgybB072