CsGy7G002730 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G002730
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	exopolygalacturonase-like
Location	Chr7 : 2190519 .. 2191414 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAGGACATAACTTCGTTGGATAGTAAGAATTTTCACTTCAATCTTTTGGGTTGCAAGAATGTTACTTTTCAAAATGTGACAATTATTGCACCAGAGAATAGTCCCAACACCGATGGAATTCATGTGAGCAGTTCAGAAGTGATTAACATTTTCAATACACGTATCTCAACCGGAGATGATTGTATATCTGTTGGAGACAGCAACAAGCAAATAACTATTACTAATGTAACTTGCGGACCAGGTCATGGCATAAGTATAGGAAGTTTAGGCAAGTACACCAAGGAGAAAGAGGTGGCAGGAGTTACAGTGAAATCATGTAAACTTATCAATACTTCAAATGGTGTTAGAATCAAGACATGGCCAGATTGTGCAGTTGCATACACAGCCTCTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTGATTATTGACCAAGAATATTGTCCATCTAATCAATGCAACAAAAAGGTATATGTATTGAAATTATTCCTTATTCATAAATTTCAACTAATTAATTAATTAACTTCAATTAAGGAATATTTTTTCTTATATATAACAAATGCAAAACTAACCTGATTTAATTTTTGGTTTTCTTTATGTATACATTTGTTCAGATTCCATCAAAAATTAAGATCAACAACGTTAGTTTCAAGAATATCAGAGGCACTTCTGCTACTTTCGTTGCTGTTAAATTTATTTGTAGCACAGTCTTTTCGTGTGAAGGTGTGGAAGTTACAGATATTGACCTCGCTTACATCGGAACTCAAGGACGGATTACGTCTCAGTGTAGAAATGTGATTCCCATCATTACTGGAAAGCAAAATCCTCGTGCGTGTGTCGAAGCTGCTCCTGTTAATTCTCCATCCACGGACTGA

mRNA sequence

ATGGTGAAGGACATAACTTCGTTGGATAGTAAGAATTTTCACTTCAATCTTTTGGGTTGCAAGAATGTTACTTTTCAAAATGTGACAATTATTGCACCAGAGAATAGTCCCAACACCGATGGAATTCATGTGAGCAGTTCAGAAGTGATTAACATTTTCAATACACGTATCTCAACCGGAGATGATTGTATATCTGTTGGAGACAGCAACAAGCAAATAACTATTACTAATGTAACTTGCGGACCAGGTCATGGCATAAGTATAGGAAGTTTAGGCAAGTACACCAAGGAGAAAGAGGTGGCAGGAGTTACAGTGAAATCATGTAAACTTATCAATACTTCAAATGGTGTTAGAATCAAGACATGGCCAGATTGTGCAGTTGCATACACAGCCTCTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTGATTATTGACCAAGAATATTGTCCATCTAATCAATGCAACAAAAAGATTCCATCAAAAATTAAGATCAACAACGTTAGTTTCAAGAATATCAGAGGCACTTCTGCTACTTTCGTTGCTGTTAAATTTATTTGTAGCACAGTCTTTTCGTGTGAAGGTGTGGAAGTTACAGATATTGACCTCGCTTACATCGGAACTCAAGGACGGATTACGTCTCAGTGTAGAAATGTGATTCCCATCATTACTGGAAAGCAAAATCCTCGTGCGTGTGTCGAAGCTGCTCCTGTTAATTCTCCATCCACGGACTGA

Coding sequence (CDS)

ATGGTGAAGGACATAACTTCGTTGGATAGTAAGAATTTTCACTTCAATCTTTTGGGTTGCAAGAATGTTACTTTTCAAAATGTGACAATTATTGCACCAGAGAATAGTCCCAACACCGATGGAATTCATGTGAGCAGTTCAGAAGTGATTAACATTTTCAATACACGTATCTCAACCGGAGATGATTGTATATCTGTTGGAGACAGCAACAAGCAAATAACTATTACTAATGTAACTTGCGGACCAGGTCATGGCATAAGTATAGGAAGTTTAGGCAAGTACACCAAGGAGAAAGAGGTGGCAGGAGTTACAGTGAAATCATGTAAACTTATCAATACTTCAAATGGTGTTAGAATCAAGACATGGCCAGATTGTGCAGTTGCATACACAGCCTCTGACTTGCATTTTGAAGATATTGAAATGGTTAATGTTAGCAATCCTGTGATTATTGACCAAGAATATTGTCCATCTAATCAATGCAACAAAAAGATTCCATCAAAAATTAAGATCAACAACGTTAGTTTCAAGAATATCAGAGGCACTTCTGCTACTTTCGTTGCTGTTAAATTTATTTGTAGCACAGTCTTTTCGTGTGAAGGTGTGGAAGTTACAGATATTGACCTCGCTTACATCGGAACTCAAGGACGGATTACGTCTCAGTGTAGAAATGTGATTCCCATCATTACTGGAAAGCAAAATCCTCGTGCGTGTGTCGAAGCTGCTCCTGTTAATTCTCCATCCACGGACTGA

Protein sequence

MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGDDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKTWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGTSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEAAPVNSPSTD

Homology

[Close]

BLAST of CsGy7G002730 vs. NCBI nr
Match: XP_011658677.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 503.1 bits (1294), Expect = 5.6e-139
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG
Sbjct: 213 MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 272

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK
Sbjct: 273 DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 332

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG
Sbjct: 333 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 392

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA
Sbjct: 393 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 452

Query: 241 APVNSPSTD 250
           APVNSPSTD
Sbjct: 453 APVNSPSTD 461

[Close]

BLAST of CsGy7G002730 vs. NCBI nr
Match: XP_008455507.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 450.7 bits (1158), Expect = 3.3e-123
Identity = 219/249 (87.95%), Postives = 231/249 (92.77%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDSKNFH NLL CKNVTFQNVTIIAPE SPNTDGIHVS+SE INI NT+ISTG
Sbjct: 275 IVKDITSLDSKNFHINLLSCKNVTFQNVTIIAPEKSPNTDGIHVSNSEEINILNTKISTG 334

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDC+SVGD NKQITITNVTCGPGHGISIGSLGKYT EKEVAGVTVKSC LINTSNGVRIK
Sbjct: 335 DDCVSVGDGNKQITITNVTCGPGHGISIGSLGKYTTEKEVAGVTVKSCNLINTSNGVRIK 394

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           +WPD AVAYTASDLHFEDIEMVNVSNP+IIDQEYCPSNQCNKKIPSKIKI NVSFKNIRG
Sbjct: 395 SWPDSAVAYTASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKKIPSKIKIRNVSFKNIRG 454

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSATFVA+KFICS    C+ VEV DI+L+Y GTQGRITSQCRNVIPIITGKQNPRAC+E 
Sbjct: 455 TSATFVAIKFICSKDLPCDDVEVADINLSYTGTQGRITSQCRNVIPIITGKQNPRACIEV 514

Query: 241 APVNSPSTD 250
           AP+NSPSTD
Sbjct: 515 APINSPSTD 523

[Close]

BLAST of CsGy7G002730 vs. NCBI nr
Match: XP_011658673.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 199/248 (80.24%), Postives = 219/248 (88.31%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDS+NFH NL  CKNVT QNVTII+PE++PN+DGIHVSSSE INI NT+IS G
Sbjct: 155 IVKDITSLDSQNFHINLFDCKNVTLQNVTIISPESNPNSDGIHVSSSEEINILNTQISNG 214

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
            DC+SVGDS+KQITITNVTCGPG GISIGSLG+Y    EV GVTVKSCKLINT NGVRIK
Sbjct: 215 ADCVSVGDSSKQITITNVTCGPGDGISIGSLGRYANRTEVTGVTVKSCKLINTWNGVRIK 274

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           +WPD A AYTASDLHFEDIEMVNVSNPV+I+QEYCP +QC+KKIPSKIKI+NVSFKNIRG
Sbjct: 275 SWPDSASAYTASDLHFEDIEMVNVSNPVVINQEYCPFDQCDKKIPSKIKISNVSFKNIRG 334

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSAT VA++ ICS    CE VEV DIDL Y GTQGRITSQCRNVIPIITGKQNPRACVEA
Sbjct: 335 TSATSVAIQLICSKDLPCEDVEVADIDLTYTGTQGRITSQCRNVIPIITGKQNPRACVEA 394

Query: 241 APVNSPST 249
           AP+N+ ST
Sbjct: 395 APINATST 402

[Close]

BLAST of CsGy7G002730 vs. NCBI nr
Match: XP_011659697.1 (PREDICTED: exopolygalacturonase-like, partial [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 1.0e-108
Identity = 192/249 (77.11%), Postives = 219/249 (87.95%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDSKNFH NLLGCKNVTFQ+VTI APENSPNTDGIH+SSSE INI +++ISTG
Sbjct: 13  IVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQINILDSKISTG 72

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDC+SVGDSNKQ+TITNVTCGPGHGIS+GSLGKYTKEK+V GVTVK+CKLINT+NGVRIK
Sbjct: 73  DDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACKLINTTNGVRIK 132

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWPD A A+ ASD+HFEDIEM NVSNPVIIDQEYCP NQCN+K+PSKIKI+ VSFKNIRG
Sbjct: 133 TWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRG 192

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSAT +AVK +CS    CEGVEV DI+L Y G +G I S+C NV P+ITGKQ+P+ C + 
Sbjct: 193 TSATPIAVKLVCSKSIPCEGVEVADINLTYSGIRGPILSECANVQPLITGKQSPQICAKP 252

Query: 241 APVNSPSTD 250
           AP  +PSTD
Sbjct: 253 APAGAPSTD 261

[Close]

BLAST of CsGy7G002730 vs. NCBI nr
Match: XP_022151199.1 (exopolygalacturonase-like, partial [Momordica charantia])

HSP 1 Score: 397.5 bits (1020), Expect = 3.3e-107
Identity = 191/249 (76.71%), Postives = 214/249 (85.94%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDSKN+H NLLGCKNVT Q+VTI APENSPNTDG+H+SSSE INI +T+I+TG
Sbjct: 159 IVKDITSLDSKNYHINLLGCKNVTIQHVTITAPENSPNTDGVHISSSEGINILDTKIATG 218

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDCISVGD+NKQI I++VTCGPGHGISIGSLGKY+KEKEV GVTVK CKLINTSNGVRIK
Sbjct: 219 DDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLINTSNGVRIK 278

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWPD AV + A+D+HFEDIEM NVSNPVIIDQEYCP NQCN+K+PS IKI+ VSFKNIRG
Sbjct: 279 TWPDAAVTFPATDMHFEDIEMTNVSNPVIIDQEYCPWNQCNRKVPSSIKISKVSFKNIRG 338

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSAT +AVK +CS    CE VEV DIDL Y G+QG I SQC NV P ITGKQNP  C E 
Sbjct: 339 TSATPIAVKLVCSKSVPCEDVEVADIDLTYSGSQGPIKSQCANVKPTITGKQNPPICAEV 398

Query: 241 APVNSPSTD 250
           AP ++PSTD
Sbjct: 399 APADAPSTD 407

[Close]

BLAST of CsGy7G002730 vs. TAIR10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-80
Identity = 141/245 (57.55%), Postives = 180/245 (73.47%), Query Frame = 0


Query: 2   VKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGD 61
           ++ ITSLD+K+FH N++G KNVTF++V IIAP  SPNTDGIHV  S+ I I N+ ISTGD
Sbjct: 151 IRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGD 210

Query: 62  DCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKT 121
           DC+SVGD  K + +  VTCGPGHGISIGSLG+Y+ E+ V+G+ + +C L  T NG+RIKT
Sbjct: 211 DCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKT 270

Query: 122 WPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGT 181
           WP  A   TASD+HFE+I + NVSNP++IDQEYCP NQCNK+ PS IK+ N+SFK IRGT
Sbjct: 271 WPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGT 330

Query: 182 SATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEAA 241
           S    AVK +CS  + C+ VEV D+++ Y G  G  T QC NV P + G Q P+AC  ++
Sbjct: 331 SGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPKAC--SS 390

Query: 242 PVNSP 247
           PV  P
Sbjct: 391 PVTKP 393

[Close]

BLAST of CsGy7G002730 vs. TAIR10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 296.2 bits (757), Expect = 1.9e-80
Identity = 137/236 (58.05%), Postives = 177/236 (75.00%), Query Frame = 0


Query: 2   VKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGD 61
           ++DI+S+D+KNFH N+LG KN+T  N+ I+APE+SPNTDGIH+  S+ + I N+ ISTGD
Sbjct: 151 IRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGD 210

Query: 62  DCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKT 121
           DCISVGD  K + +  VTCGPGHGIS+GSLG+Y  E++V+G+ V +C L  T NG+RIKT
Sbjct: 211 DCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKT 270

Query: 122 WPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGT 181
           WP  A + TASD+HFEDI + +VSNP++IDQEYCP NQCNK+  S IK+ N+SFKNIRGT
Sbjct: 271 WPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGT 330

Query: 182 SATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRAC 238
           S    AVK +CS  + C+ VE+ DID+ Y G  G  T  C NV P I G Q+P+AC
Sbjct: 331 SGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSPKAC 386

[Close]

BLAST of CsGy7G002730 vs. TAIR10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 296.2 bits (757), Expect = 1.9e-80
Identity = 138/236 (58.47%), Postives = 175/236 (74.15%), Query Frame = 0


Query: 2   VKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGD 61
           ++DI+S+D+KNFH N+LG KN+TF NV +IAP  SPNTDGIH+  SE + I N++I+TGD
Sbjct: 152 IRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGD 211

Query: 62  DCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKT 121
           DCISVGD  K + + NV CGPGHGIS+GSLG+Y  E++V G+TV +C L  T NG+RIKT
Sbjct: 212 DCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKT 271

Query: 122 WPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGT 181
           WP  A A TAS +HFE+I + NVSNP++IDQEYCP NQCNK+ PS IK+ ++SFKNIRGT
Sbjct: 272 WPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGT 331

Query: 182 SATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRAC 238
           S    AVK +CS    C  VE+ +I+L Y G  G  T  C NV P + G QNP+AC
Sbjct: 332 SGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQNPKAC 387

[Close]

BLAST of CsGy7G002730 vs. TAIR10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 285.8 bits (730), Expect = 2.5e-77
Identity = 132/236 (55.93%), Postives = 174/236 (73.73%), Query Frame = 0


Query: 2   VKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGD 61
           ++DI+S+D+KNFH N++G KN+TF NV I+AP  SPNTDGIH+  S  ++I N+RISTGD
Sbjct: 152 IRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGD 211

Query: 62  DCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKT 121
           DC+SVGD    + + NV CGPGHGIS+GSLG+Y  E++V+G+ V +C L  T NG+RIKT
Sbjct: 212 DCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKT 271

Query: 122 WPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGT 181
           WP  A + TAS++HFE+I + NVSNP++IDQEYCP NQCNK+  S IK+ N+SF+ IRGT
Sbjct: 272 WPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGT 331

Query: 182 SATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRAC 238
           S    AVK +CS  + CE V+V DI++ Y G  G  T  C NV P + G Q P+AC
Sbjct: 332 SGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFPKAC 387

[Close]

BLAST of CsGy7G002730 vs. TAIR10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 261.9 bits (668), Expect = 3.9e-70
Identity = 125/240 (52.08%), Postives = 164/240 (68.33%), Query Frame = 0


Query: 2   VKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGD 61
           +  ITS +SK FH N+L CKN+T  ++ I AP  S NTDGIH+  S  +N+   +I TGD
Sbjct: 203 INSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGD 262

Query: 62  DCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKT 121
           DC+S+GD  + + + NV CGPGHGISIGSLG+Y  E+ V GVTV+ C + NT NGVRIKT
Sbjct: 263 DCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKT 322

Query: 122 WPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGT 181
           WP       AS++ FEDI M NVS PV+IDQEYCP   C   +PSK+K+++V+ KNI+GT
Sbjct: 323 WPGSPPG-IASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGT 382

Query: 182 SATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEAA 241
           SAT VAVK +CS    C  + ++DI+L + G +G   S C N+ PI++GK  P AC E A
Sbjct: 383 SATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAACTEVA 441

[Close]

BLAST of CsGy7G002730 vs. Swiss-Prot
Match: sp|P35337|PGLR_BRANA (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.6e-79
Identity = 138/237 (58.23%), Postives = 174/237 (73.42%), Query Frame = 0


Query: 2   VKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGD 61
           +KD+TSLD+KNFHFN++  KN+TF N+ IIAP  SPNTDGIH+   E + I NT+I+TGD
Sbjct: 151 IKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGD 210

Query: 62  DCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKT 121
           DCISVGD  K + I  V CGPGHGIS+GSLG+Y  E++V  +TVK+C L  TSNG+RIKT
Sbjct: 211 DCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKT 270

Query: 122 WPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGT 181
           WP  A   TA+ +HFEDI +  VSNP++IDQEYCP NQCNK  PS IK+ +++F+NIRGT
Sbjct: 271 WPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGT 330

Query: 182 SATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACV 239
           S    AVK +CS    CE VE+ DI++ Y G  G  T +C NV P + G QNP+ACV
Sbjct: 331 SENKDAVKLLCSKGHPCENVEIGDINIEYTGPDGPPTFECTNVTPKLVGAQNPKACV 387

[Close]

BLAST of CsGy7G002730 vs. Swiss-Prot
Match: sp|P24548|PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.4e-77
Identity = 134/241 (55.60%), Postives = 173/241 (71.78%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +++D+T+LDSKNFH N++GCKN+TF+   I A E S NTDGIH+  S+ +NI NT I TG
Sbjct: 119 ILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTG 178

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDCIS+GD +K I ITN+TCGPGHGIS+GSLG+Y  E+ V G+ VK+C +  + NGVRIK
Sbjct: 179 DDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIK 238

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWP       AS++HF+DI M +V  P++IDQ YCP NQC  ++PS +K++ +SFKNI+G
Sbjct: 239 TWPKSEPG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKG 298

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TS T  AVK +CS  F C GVE+ DIDL Y G  G  TS C N+ P I GKQ P  C  +
Sbjct: 299 TSTTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICSGS 358

Query: 241 A 242
           A
Sbjct: 359 A 358

[Close]

BLAST of CsGy7G002730 vs. Swiss-Prot
Match: sp|Q40312|PGLR_MEDSA (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 7.1e-77
Identity = 134/230 (58.26%), Postives = 169/230 (73.48%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +V+ +TS DSKNFH  + GCKN+TF   TI AP +SPNTDGIH+  S  + I NT I TG
Sbjct: 159 IVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTG 218

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDC+S+GD +KQIT+  V CGPGHG+S+GSLGK+T E+ V G+TVK+C L  T NGVRIK
Sbjct: 219 DDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIK 278

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWPD     T SD+HFEDI M NV NPVIIDQEY P NQC+KK PSKIK++ +SFKN++G
Sbjct: 279 TWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKG 338

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITG 231
           TS T   V  ICS+   C+GVE+ ++DL + G     T++C NV P++TG
Sbjct: 339 TSGTAEGVVLICSSAVPCDGVELNNVDLKFNGAP--TTAKCTNVKPLVTG 386

[Close]

BLAST of CsGy7G002730 vs. Swiss-Prot
Match: sp|Q05967|PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-75
Identity = 139/244 (56.97%), Postives = 173/244 (70.90%), Query Frame = 0


Query: 2   VKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTGD 61
           +KDIT+LDSK+FH N+  CKN+TF    + AP NSPNTDGIHVS S  +NI ++  STGD
Sbjct: 154 IKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGD 213

Query: 62  DCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIKT 121
           DCISVGD  +Q+ IT VTCGPGHGIS+GSLG    EK V GV V++C   NT NGVRIKT
Sbjct: 214 DCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKT 273

Query: 122 WPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRGT 181
           WP  +     +D+HFEDI + NVSNPV+IDQ YCP N+CNK +PS++KI+ VSF+NI+GT
Sbjct: 274 WP-ASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGT 333

Query: 182 SATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEAA 241
           S T  AV  + S    CEG+EV DID+ Y G +G   S C N+ P + GKQNP  C  +A
Sbjct: 334 SRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLKGKQNPPVCTASA 393

Query: 242 PVNS 246
             +S
Sbjct: 394 ASSS 396

[Close]

BLAST of CsGy7G002730 vs. Swiss-Prot
Match: sp|Q39786|PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.2e-73
Identity = 133/248 (53.63%), Postives = 172/248 (69.35%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +++DITS DSK FH N+  CKN+T + + I AP+ SPNTDGIH+  SE +NI  + I TG
Sbjct: 161 LIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTG 220

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDCIS+GD  K + I  +TCGPGHGISIGSLGK+  E+ V G+ + +C + NTSNG RIK
Sbjct: 221 DDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIK 280

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWP        S++HFEDI M NVS+P++IDQ+YCP N+C K   SK+K++N+SFKNIRG
Sbjct: 281 TWPG-EHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRG 340

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSA   A+KFICS    C+ VE+ DID+ + G +   TSQC NV PI +GK NP  C   
Sbjct: 341 TSALPEAIKFICSGSSPCQNVELADIDIKHNGAE-PATSQCLNVKPITSGKLNPIPCSGP 400

Query: 241 APVNSPST 249
            P    +T
Sbjct: 401 VPKTPSAT 406

[Close]

BLAST of CsGy7G002730 vs. TrEMBL
Match: tr|A0A1S3C129|A0A1S3C129_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495658 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 2.2e-123
Identity = 219/249 (87.95%), Postives = 231/249 (92.77%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDSKNFH NLL CKNVTFQNVTIIAPE SPNTDGIHVS+SE INI NT+ISTG
Sbjct: 275 IVKDITSLDSKNFHINLLSCKNVTFQNVTIIAPEKSPNTDGIHVSNSEEINILNTKISTG 334

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDC+SVGD NKQITITNVTCGPGHGISIGSLGKYT EKEVAGVTVKSC LINTSNGVRIK
Sbjct: 335 DDCVSVGDGNKQITITNVTCGPGHGISIGSLGKYTTEKEVAGVTVKSCNLINTSNGVRIK 394

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           +WPD AVAYTASDLHFEDIEMVNVSNP+IIDQEYCPSNQCNKKIPSKIKI NVSFKNIRG
Sbjct: 395 SWPDSAVAYTASDLHFEDIEMVNVSNPIIIDQEYCPSNQCNKKIPSKIKIRNVSFKNIRG 454

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSATFVA+KFICS    C+ VEV DI+L+Y GTQGRITSQCRNVIPIITGKQNPRAC+E 
Sbjct: 455 TSATFVAIKFICSKDLPCDDVEVADINLSYTGTQGRITSQCRNVIPIITGKQNPRACIEV 514

Query: 241 APVNSPSTD 250
           AP+NSPSTD
Sbjct: 515 APINSPSTD 523

[Close]

BLAST of CsGy7G002730 vs. TrEMBL
Match: tr|A0A1S4E643|A0A1S4E643_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103504477 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.9e-107
Identity = 192/249 (77.11%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDSKN+H NLLGCKN+TF +VTI AP NSPNTDGIHVSSSE INI NT I+TG
Sbjct: 111 IVKDITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATG 170

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDCISVGD+NKQ+ I++VTCGPGHGISIGSLGKY+KEKEV GVTVK CKL +T+NGVRIK
Sbjct: 171 DDCISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIK 230

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWPD AVA+ ASD+HFEDIEMVNVSNPVIIDQEYCP NQCN+K+PSKIKI+NVSFKNIRG
Sbjct: 231 TWPDSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRG 290

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSAT VAVK +CS    CEGVEV DIDL Y G++G I SQC NV P+I+GKQNP  C E 
Sbjct: 291 TSATPVAVKIVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEP 350

Query: 241 APVNSPSTD 250
           AP   PS+D
Sbjct: 351 APAGGPSSD 359

[Close]

BLAST of CsGy7G002730 vs. TrEMBL
Match: tr|A0A1S4E3K9|A0A1S4E3K9_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103500563 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 3.2e-106
Identity = 196/249 (78.71%), Postives = 210/249 (84.34%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDS  FH NLL CKNVT QNVTIIA ENSPNTDG+HVS SE INI NT+ISTG
Sbjct: 152 IVKDITSLDSNYFHINLLSCKNVTLQNVTIIASENSPNTDGVHVSRSEEINILNTQISTG 211

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
            DC+SVG +NKQI ITNVTCGPG GISIGSLGKYTKE+EV GV VKSCKLINT NGVRIK
Sbjct: 212 ADCVSVGGTNKQIVITNVTCGPGDGISIGSLGKYTKEREVTGVAVKSCKLINTWNGVRIK 271

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWPD A AYTASDLHFEDIEMVNVSNP+II+QEYC SNQCN KIPSKIKI NVSFKNIRG
Sbjct: 272 TWPDSASAYTASDLHFEDIEMVNVSNPIIINQEYCSSNQCNNKIPSKIKILNVSFKNIRG 331

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSAT VAVKFICS    CEGVEV DIDLAY G +G I SQC NV   +TGKQNP+ C + 
Sbjct: 332 TSATSVAVKFICSKDLPCEGVEVADIDLAYNGVEGPIVSQCANVKYTVTGKQNPQVCAKV 391

Query: 241 APVNSPSTD 250
           AP+ +PSTD
Sbjct: 392 APIEAPSTD 400

[Close]

BLAST of CsGy7G002730 vs. TrEMBL
Match: tr|A0A1S3BN96|A0A1S3BN96_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.0e-104
Identity = 188/249 (75.50%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDSKN+HFNLL CKN+TF +VTI AP NSPNTDGIHV  SE INI NT I+TG
Sbjct: 178 IVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQINILNTNIATG 237

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDCISVG SNKQI I++VTCGPGHGISIGSLGKYT EKE+ GVTVK CKL  T+NGVRIK
Sbjct: 238 DDCISVGSSNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCKLTGTTNGVRIK 297

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWPD AVA+ ASD+HFEDIEMVNVSNPV+IDQEYCP NQCN+K+PSKIKI+ VSFKNIRG
Sbjct: 298 TWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIKISKVSFKNIRG 357

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSAT VAVK +CS    CEGVEV DIDL Y G++G I SQC NV P+I+GKQNP  C E 
Sbjct: 358 TSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICAEP 417

Query: 241 APVNSPSTD 250
           AP   PS+D
Sbjct: 418 APAGGPSSD 426

[Close]

BLAST of CsGy7G002730 vs. TrEMBL
Match: tr|A0A1S3BML3|A0A1S3BML3_CUCME (LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491497 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 2.3e-104
Identity = 188/249 (75.50%), Postives = 209/249 (83.94%), Query Frame = 0


Query: 1   MVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEVINIFNTRISTG 60
           +VKDITSLDSKN+HFNLL CKN+TF +VTI AP NSPNTDGIHV  SE INI NT I+TG
Sbjct: 167 IVKDITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQINILNTNIATG 226

Query: 61  DDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCKLINTSNGVRIK 120
           DDCISVG SNKQI I++VTCGPGHGISIGSLGKYT EKE+ GVTVK CKL  T+NGVRIK
Sbjct: 227 DDCISVGISNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCKLTGTTNGVRIK 286

Query: 121 TWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIKINNVSFKNIRG 180
           TWPD AVA+ ASD+HFEDIEMVNVSNPV+IDQEYCP NQCN+K+PSKIKI+ VSFKNIRG
Sbjct: 287 TWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIKISKVSFKNIRG 346

Query: 181 TSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRITSQCRNVIPIITGKQNPRACVEA 240
           TSAT VAVK +CS    CEGVEV DIDL Y G++G I SQC NV P+I+GKQNP  C E 
Sbjct: 347 TSATPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICAEP 406

Query: 241 APVNSPSTD 250
           AP   PS+D
Sbjct: 407 APAGGPSSD 415

The following BLAST results are available for this feature:

BLAST of CsGy7G002730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658677.1	5.6e-139	100.00	PREDICTED: exopolygalacturonase-like [Cucumis sativus]	[more]
XP_008455507.2	3.3e-123	87.95	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
XP_011658673.1	1.2e-109	80.24	PREDICTED: exopolygalacturonase-like [Cucumis sativus]	[more]
XP_011659697.1	1.0e-108	77.11	PREDICTED: exopolygalacturonase-like, partial [Cucumis sativus]	[more]
XP_022151199.1	3.3e-107	76.71	exopolygalacturonase-like, partial [Momordica charantia]	[more]

BLAST of CsGy7G002730 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48140.1	1.1e-80	57.55	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	1.9e-80	58.05	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	1.9e-80	58.47	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	2.5e-77	55.93	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	3.9e-70	52.08	Pectin lyase-like superfamily protein	[more]

BLAST of CsGy7G002730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P35337\|PGLR_BRANA	7.6e-79	58.23	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]
sp\|P24548\|PGLR_OENOR	2.4e-77	55.60	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
sp\|Q40312\|PGLR_MEDSA	7.1e-77	58.26	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
sp\|Q05967\|PGLR_TOBAC	1.7e-75	56.97	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
sp\|Q39786\|PGLR_GOSHI	6.2e-73	53.63	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]

BLAST of CsGy7G002730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C129\|A0A1S3C129_CUCME	2.2e-123	87.95	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495658 PE=3 SV=1	[more]
tr\|A0A1S4E643\|A0A1S4E643_CUCME	4.9e-107	77.11	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103504477 PE=3 SV=1	[more]
tr\|A0A1S4E3K9\|A0A1S4E3K9_CUCME	3.2e-106	78.71	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103500563 PE=3 SV=1	[more]
tr\|A0A1S3BN96\|A0A1S3BN96_CUCME	1.0e-104	75.50	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491498 PE=3 SV=1	[more]
tr\|A0A1S3BML3\|A0A1S3BML3_CUCME	2.3e-104	75.50	LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR000743	Glyco_hydro_28
IPR006626	PbH1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0071555	cell wall organization
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G002730.1	CsGy7G002730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 70..90 e-value: 3500.0 score: 3.4 coord: 20..46 e-value: 2.3 score: 17.2 coord: 47..68 e-value: 3400.0 score: 3.5 coord: 100..121 e-value: 17.0 score: 14.4 coord: 131..152 e-value: 6800.0 score: 1.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 2..224 e-value: 3.5E-76 score: 256.2
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 77..90
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 1..247 e-value: 3.5E-72 score: 245.6
None	No IPR available	PANTHER	PTHR31375:SF37	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..233
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..233
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 2..239

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G002730	Csa7G037570	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G002730	MELO3C018881.2	Melon (DHL92) v3.6.1	cgybmedB465

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G002730	Cucumber (Chinese Long) v3	cgybcucB316
CsGy7G002730	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G002730	Cucumber (Chinese Long) v3	cgybcucB349
CsGy7G002730	Watermelon (97103) v2	cgybwmbB500
CsGy7G002730	Watermelon (97103) v2	cgybwmbB502
CsGy7G002730	Wax gourd	cgybwgoB640
CsGy7G002730	Wax gourd	cgybwgoB641
CsGy7G002730	Wax gourd	cgybwgoB650
CsGy7G002730	Cucumber (Gy14) v2	cgybcgybB072
CsGy7G002730	Cucurbita maxima (Rimu)	cgybcmaB899
CsGy7G002730	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G002730	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G002730	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G002730	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G002730	Cucurbita pepo (Zucchini)	cgybcpeB919
CsGy7G002730	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G002730	Cucumber (Chinese Long) v2	cgybcuB296
CsGy7G002730	Cucumber (Chinese Long) v2	cgybcuB328
CsGy7G002730	Bottle gourd (USVL1VR-Ls)	cgyblsiB455
CsGy7G002730	Bottle gourd (USVL1VR-Ls)	cgyblsiB462
CsGy7G002730	Melon (DHL92) v3.5.1	cgybmeB467
CsGy7G002730	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G002730	Melon (DHL92) v3.6.1	cgybmedB464
CsGy7G002730	Watermelon (Charleston Gray)	cgybwcgB504
CsGy7G002730	Watermelon (Charleston Gray)	cgybwcgB506
CsGy7G002730	Watermelon (97103) v1	cgybwmB565
CsGy7G002730	Watermelon (97103) v1	cgybwmB566
CsGy7G002730	Wild cucumber (PI 183967)	cgybcpiB304
CsGy7G002730	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G002730	Silver-seed gourd	carcgybB0217
CsGy7G002730	Silver-seed gourd	carcgybB1049