CsGy6G029610 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCATTCCCCGCCACAGAAACTCCGAGACCGTATCGCTCATCGTCTCAGTACGAATGGCGAGCATCACTACAATGCTCCTTCGTCCCAATCTCATACCCTCTTCCTCCCATCTGCTTTCCCCTTCTCTCCGTCCATCCCTTCCTCCCTCGATCATCCGCTTCCGGACCTCCAGAAAATCCACCACTCACAAACCTTTCTCCCTTTCAGTCTCAGCTACTTTACAAGCTCTAATTTTCGACTGCGACGGCGTCATCCTTGAGTCCGAGCACTTGCACCGCCAAGCATATAACGATGCCTTTGTCCATTTTGATGTCCGTTGCCCTAATTCGACGTCGCAGCCTCTCAATTGGAGTATCGAGTTCTACGACGAGCTCCAGAACCGCATTGGTGGCGGTAAACCTAAAATGCGATGGTATTGTTCTCTTTTTATCATTTTTACTGTTATTGTTCCTCATAATGTGTTGCGAATGTTCACGGCGGTTTTTCGGCATCCGATAGGTACTTCAAGGAGAATGGATGGCCATCTTCAACGATCTTCGAGAAGGCTCCGGAAGATGACGAGGAACGAGCAAAGTTGATTGATATTCTTCAGGCATATTTTACTTAA GCCATTCCCCGCCACAGAAACTCCGAGACCGTATCGCTCATCGTCTCAGTACGAATGGCGAGCATCACTACAATGCTCCTTCGTCCCAATCTCATACCCTCTTCCTCCCATCTGCTTTCCCCTTCTCTCCGTCCATCCCTTCCTCCCTCGATCATCCGCTTCCGGACCTCCAGAAAATCCACCACTCACAAACCTTTCTCCCTTTCAGTCTCAGCTACTTTACAAGCTCTAATTTTCGACTGCGACGGCGTCATCCTTGAGTCCGAGCACTTGCACCGCCAAGCATATAACGATGCCTTTGTCCATTTTGATGTCCGTTGCCCTAATTCGACGTCGCAGCCTCTCAATTGGAGTATCGAGTTCTACGACGAGCTCCAGAACCGCATTGGTGGCGGTAAACCTAAAATGCGATGGTACTTCAAGGAGAATGGATGGCCATCTTCAACGATCTTCGAGAAGGCTCCGGAAGATGACGAGGAACGAGCAAAGTTGATTGATATTCTTCAGGCATATTTTACTTAA ATGGCGAGCATCACTACAATGCTCCTTCGTCCCAATCTCATACCCTCTTCCTCCCATCTGCTTTCCCCTTCTCTCCGTCCATCCCTTCCTCCCTCGATCATCCGCTTCCGGACCTCCAGAAAATCCACCACTCACAAACCTTTCTCCCTTTCAGTCTCAGCTACTTTACAAGCTCTAATTTTCGACTGCGACGGCGTCATCCTTGAGTCCGAGCACTTGCACCGCCAAGCATATAACGATGCCTTTGTCCATTTTGATGTCCGTTGCCCTAATTCGACGTCGCAGCCTCTCAATTGGAGTATCGAGTTCTACGACGAGCTCCAGAACCGCATTGGTGGCGGTAAACCTAAAATGCGATGGTACTTCAAGGAGAATGGATGGCCATCTTCAACGATCTTCGAGAAGGCTCCGGAAGATGACGAGGAACGAGCAAAGTTGATTGATATTCTTCAGGCATATTTTACTTAA MASITTMLLRPNLIPSSSHLLSPSLRPSLPPSIIRFRTSRKSTTHKPFSLSVSATLQALIFDCDGVILESEHLHRQAYNDAFVHFDVRCPNSTSQPLNWSIEFYDELQNRIGGGKPKMRWYFKENGWPSSTIFEKAPEDDEERAKLIDILQAYFT
BLAST of CsGy6G029610 vs. NCBI nr
Match: XP_004143461.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Cucumis sativus] >KGN48739.1 hypothetical protein Csa_6G499830 [Cucumis sativus]) HSP 1 Score: 310.1 bits (793), Expect = 4.3e-81 Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of CsGy6G029610 vs. NCBI nr
Match: XP_008440586.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Cucumis melo]) HSP 1 Score: 289.3 bits (739), Expect = 7.9e-75 Identity = 142/155 (91.61%), Postives = 146/155 (94.19%), Query Frame = 0
BLAST of CsGy6G029610 vs. NCBI nr
Match: XP_023003094.1 (haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Cucurbita maxima]) HSP 1 Score: 278.9 bits (712), Expect = 1.1e-71 Identity = 136/155 (87.74%), Postives = 144/155 (92.90%), Query Frame = 0
BLAST of CsGy6G029610 vs. NCBI nr
Match: XP_023517752.1 (haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277.7 bits (709), Expect = 2.4e-71 Identity = 136/155 (87.74%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of CsGy6G029610 vs. NCBI nr
Match: XP_022963402.1 (haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Cucurbita moschata]) HSP 1 Score: 275.0 bits (702), Expect = 1.5e-70 Identity = 135/155 (87.10%), Postives = 142/155 (91.61%), Query Frame = 0
BLAST of CsGy6G029610 vs. TAIR10
Match: AT4G39970.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 177.2 bits (448), Expect = 7.9e-45 Identity = 90/159 (56.60%), Postives = 111/159 (69.81%), Query Frame = 0
BLAST of CsGy6G029610 vs. TAIR10
Match: AT3G48420.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 75.5 bits (184), Expect = 3.3e-14 Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = 0
BLAST of CsGy6G029610 vs. Swiss-Prot
Match: sp|Q680K2|GPPL1_ARATH (Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana OX=3702 GN=At4g39970 PE=2 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.4e-43 Identity = 90/159 (56.60%), Postives = 111/159 (69.81%), Query Frame = 0
BLAST of CsGy6G029610 vs. Swiss-Prot
Match: sp|Q94K71|CBBY_ARATH (CBBY-like protein OS=Arabidopsis thaliana OX=3702 GN=CBBY PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 5.9e-13 Identity = 51/143 (35.66%), Postives = 78/143 (54.55%), Query Frame = 0
BLAST of CsGy6G029610 vs. Swiss-Prot
Match: sp|O33513|CBBY_RHOCA (Protein CbbY OS=Rhodobacter capsulatus OX=1061 GN=cbbY PE=3 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 6.5e-04 Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of CsGy6G029610 vs. TrEMBL
Match: tr|A0A0A0KIV1|A0A0A0KIV1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499830 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.9e-81 Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of CsGy6G029610 vs. TrEMBL
Match: tr|A0A1S3B1H7|A0A1S3B1H7_CUCME (haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Cucumis melo OX=3656 GN=LOC103484962 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 5.2e-75 Identity = 142/155 (91.61%), Postives = 146/155 (94.19%), Query Frame = 0
BLAST of CsGy6G029610 vs. TrEMBL
Match: tr|W9SFE6|W9SFE6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000463 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 5.5e-48 Identity = 105/162 (64.81%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of CsGy6G029610 vs. TrEMBL
Match: tr|A0A2P4I6Z9|A0A2P4I6Z9_QUESU (Haloacid dehalogenase-like hydrolase domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_36938 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 6.0e-47 Identity = 104/159 (65.41%), Postives = 119/159 (74.84%), Query Frame = 0
BLAST of CsGy6G029610 vs. TrEMBL
Match: tr|W9QKT7|W9QKT7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022150 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46 Identity = 103/162 (63.58%), Postives = 119/162 (73.46%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |