CsGy6G025050 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G025050
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	NAC domain-containing protein 90-like
Location	Chr6 : 24730306 .. 24732665 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGAAGAAGAAGAAGAAGAAATAATGGAAGATTATACTTTGCCACCTGGGTTTAGATTTTACCCAACAGAAGAAGAGCTTGTTTCATTTTATTTGTATCATAAGCTTGAAGGTGGAAGACAGTATTTTAATGGTGTTGTTGATCAAATCATACCTATTTTGGATATATATCACTTCAATCCTTGGGATCTTCCACGTAATTTTCCCCTTTTTCCCTCTGATCTCTACTACTATATCTTCTGCTCTTCATCTTTTTCTTCTTGGGTGGGGAGTTGTGTTATTAAACTTAATTAATGAGTTGTTTAGCGTAATCTGTTAGGGTGTTTATGAAAATTATATATTGCAATTAGGTATAAGCATGAAAAAATATTTTTTTACAAATTAGGATAGCAAGTGATCTTGAAACTGTGAAAATCACTTCCACTGTGTATATATATATATATATATTGAAAAATGATCTTTAAAAACATTTTTCTTTCCTTGTTTGTTTTTGTATTTTTATATTTAATCATGTCGTTTATGATTTTTAATCTTAAGGGCTGGAGAAGTAGAAGTGCATCAGACAAAGAACTCCTCTTCTATATCTAATAATTTAAATTATATTTTATTAATACGAGGGCTCTCTCTCAATTAATCAACTCAAAGATATATCTAACCTATATTTTTAGTAAATCATGTAAAGTGATCAATATATGGGTGTAAAAACAGTATTTTTAATGATTACTTCATAAAGTGAATTGAATAAAACTCTAATTTTGATTAACAAGATTGTTCGTTTTTAGCTAGAGATCATATATAGATATATTGTATGTGTGTGTGTTTTTTTTGTTGGTAGAATTTGCTGGGGAGGTGTGCAAGAGAGATGAAGAACAATGGTTTTTCTTCATACCAAGGCAAGAAAGTGAAGCAAGAGGAGGAAGACCAAAGAGAGTGACAAGCAGTGGATATTGGAAAGCAACTGGCTCGCCAACATATGTTTACTCTTCAAACAATCACAGAAGCATTGGTATTAAAAGGTCTATGGTTTTCTACAATGGAAGAGCCCCAAGGGAACCAAAACTCAATGGAAAATGAATGAATATAAACTCGTCCCTGGGGAACAACCTTTTCCAGCTTCTACCACAATTCCTAAGGTCTTAATCTCTCTAACCCTAACTACCCTTCCTAAATACATATATACATATATACACTTCAATTTTTCTCATTCACTTAGATCTATCTCTTTTTGTTGGACTCCGACCATGGGGATGATTTGGGTTTACGAATAATTCTTATACGTTTCAATATTCTTTTTTTCAGAGTACTATAGTTTATTTTTAGTTTCTTAGTAGGATTTTTGAAACTTTCCAGACGTGCTGTATTATTTAATTCATATACTTCTAGTTAAATGTTTTAGATTAGTATACAAGCTTATAATTTCTGTGTGATAAATTTGGGGTAGTCTTTAGTCCATGCATTGTTGTTTAATTTGGATGCAACTAGCTAATATTGAGGGTGTAATATTTAAATAATATGCAAATGAACTAGGTTTGTCATGTGTGAAAATGTTCATATTATATAATTAATACGAGAAAACTCATAACACAGAATTAAAGTGTAAAGAATGGTACATATTATAAAGTATATATAGGGTAAAAAGAATTAAGTTCTTTCAAGTTATTAATCTCGATGCATATGCATGGCATGCAGTTGAGCTTGTGTCGGATTTACAAGAAATCAAAGACAGTGAGAGCATTCGATAGAAGACCGCCACCACCGCAAGTGGAGGCTCCAATTCCGACTGAGCTACGAGCAACAACGTCTCAACATAACGATGTGGGTGATCAATTTGTAGACGATGACCAGAAGTTATCTAATCCGCTATTAATGACGACGGAGAGACCGTGCTCGCCGGAGTCTTCTTCCTCTGGAGATGACCATGGAGAATCGTCAACCAACGACAATAATGGGCAGTTGAAGATGGAAGTTGATAATAATGAGCTTGTGTGGGATTGGAACCATTTAAATTGGCTCTAGAGATAGTAGTCTTCAACTTCAAGGAAAAGGATAGAATTCATATTGAAGAGGAAACTTTATTCCCATAAGTCAAATACCAATTTTAATTATCATAAACTCTTTATATATTTATGAACTATCATACACTCTTCTATATCTATATACATTTATGTGAGCCATTGACTTGACCATAGTTTATTGGTCCTGTTAAGTTACTATATATATATATCCCTAATTGAGAGTTATGCTATCAATACTCGAGATCATAGTTTATTGGTCTCTTTTGATTTAAATATAGTTTGTTTTCTTTTGTATTAAGCTTATAATTAACACCATTTCTATTTATTGACTTTTTCGTTTTCT

mRNA sequence

AAGAAGAAGAAGAAGAAGAAGAAATAATGGAAGATTATACTTTGCCACCTGGGTTTAGATTTTACCCAACAGAAGAAGAGCTTGTTTCATTTTATTTGTATCATAAGCTTGAAGGTGGAAGACAGTATTTTAATGGTGTTGTTGATCAAATCATACCTATTTTGGATATATATCACTTCAATCCTTGGGATCTTCCACAATTTGCTGGGGAGGTGTGCAAGAGAGATGAAGAACAATGGTTTTTCTTCATACCAAGGCAAGAAAGTGAAGCAAGAGGAGGAAGACCAAAGAGAGTGACAAGCAGTGGATATTGGAAAGCAACTGGCTCGCCAACATATGTTTACTCTTCAAACAATCACAGAAGCATTGGTATTAAAAGGTCTATGGTTTTCTACAATGGAAGAGCCCCAAGGGAACCAAAACTCAATGGAAAATGAATGAATATAAACTCGTCCCTGGGGAACAACCTTTTCCAGCTTCTACCACAATTCCTAAGTTGAGCTTGTGTCGGATTTACAAGAAATCAAAGACAGTGAGAGCATTCGATAGAAGACCGCCACCACCGCAAGTGGAGGCTCCAATTCCGACTGAGCTACGAGCAACAACGTCTCAACATAACGATGTGGGTGATCAATTTGTAGACGATGACCAGAAGTTATCTAATCCGCTATTAATGACGACGGAGAGACCGTGCTCGCCGGAGTCTTCTTCCTCTGGAGATGACCATGGAGAATCGTCAACCAACGACAATAATGGGCAGTTGAAGATGGAAGTTGATAATAATGAGCTTGTGTGGGATTGGAACCATTTAAATTGGCTCTAGAGATAGTAGTCTTCAACTTCAAGGAAAAGGATAGAATTCATATTGAAGAGGAAACTTTATTCCCATAAGTCAAATACCAATTTTAATTATCATAAACTCTTTATATATTTATGAACTATCATACACTCTTCTATATCTATATACATTTATGTGAGCCATTGACTTGACCATAGTTTATTGGTCCTGTTAAGTTACTATATATATATATCCCTAATTGAGAGTTATGCTATCAATACTCGAGATCATAGTTTATTGGTCTCTTTTGATTTAAATATAGTTTGTTTTCTTTTGTATTAAGCTTATAATTAACACCATTTCTATTTATTGACTTTTTCGTTTTCT

Coding sequence (CDS)

ATGGAAGATTATACTTTGCCACCTGGGTTTAGATTTTACCCAACAGAAGAAGAGCTTGTTTCATTTTATTTGTATCATAAGCTTGAAGGTGGAAGACAGTATTTTAATGGTGTTGTTGATCAAATCATACCTATTTTGGATATATATCACTTCAATCCTTGGGATCTTCCACAATTTGCTGGGGAGGTGTGCAAGAGAGATGAAGAACAATGGTTTTTCTTCATACCAAGGCAAGAAAGTGAAGCAAGAGGAGGAAGACCAAAGAGAGTGACAAGCAGTGGATATTGGAAAGCAACTGGCTCGCCAACATATGTTTACTCTTCAAACAATCACAGAAGCATTGGTATTAAAAGGTCTATGGTTTTCTACAATGGAAGAGCCCCAAGGGAACCAAAACTCAATGGAAAATGA

Protein sequence

MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYNGRAPREPKLNGK

Homology

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BLAST of CsGy6G025050 vs. NCBI nr
Match: XP_004143387.1 (PREDICTED: NAC domain-containing protein 90-like [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 1.4e-72
Identity = 130/136 (95.59%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA
Sbjct: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120
           GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM
Sbjct: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120

Query: 121 VFYNGRAPREPKLNGK 137
           VFYNGRAP+  K   K
Sbjct: 121 VFYNGRAPKGTKTQWK 136

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BLAST of CsGy6G025050 vs. NCBI nr
Match: KGN48276.1 (hypothetical protein Csa_6G452770 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 5.5e-72
Identity = 129/135 (95.56%), Postives = 130/135 (96.30%), Query Frame = 0


Query: 2   EDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAG 61
           EDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAG
Sbjct: 16  EDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAG 75

Query: 62  EVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMV 121
           EVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMV
Sbjct: 76  EVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMV 135

Query: 122 FYNGRAPREPKLNGK 137
           FYNGRAP+  K   K
Sbjct: 136 FYNGRAPKGTKTQWK 150

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BLAST of CsGy6G025050 vs. NCBI nr
Match: XP_008462590.1 (PREDICTED: NAC domain-containing protein 90-like [Cucumis melo])

HSP 1 Score: 278.9 bits (712), Expect = 9.4e-72
Identity = 129/136 (94.85%), Postives = 130/136 (95.59%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           ME YTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA
Sbjct: 76  MEGYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 135

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120
           GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM
Sbjct: 136 GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 195

Query: 121 VFYNGRAPREPKLNGK 137
           VFYNGRAP+  K   K
Sbjct: 196 VFYNGRAPKGTKTQWK 211

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BLAST of CsGy6G025050 vs. NCBI nr
Match: XP_022926168.1 (NAC domain-containing protein 90-like [Cucurbita moschata])

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-59
Identity = 109/132 (82.58%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 5   TLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVC 64
           +LPPGFRFYPTEEELVSFYL+HKL+GG Q     VDQ IP+L+IY FNPWDLPQFAGEVC
Sbjct: 4   SLPPGFRFYPTEEELVSFYLFHKLQGGTQDLIRAVDQTIPLLNIYLFNPWDLPQFAGEVC 63

Query: 65  KRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYN 124
           KRDEEQWFFFIPRQESEARGGRPKRVT++GYWKATGSPTYVYSSN HRSIG+KRSMVFYN
Sbjct: 64  KRDEEQWFFFIPRQESEARGGRPKRVTANGYWKATGSPTYVYSSNTHRSIGVKRSMVFYN 123

Query: 125 GRAPREPKLNGK 137
           GRAP+  K   K
Sbjct: 124 GRAPKGTKTQWK 135

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BLAST of CsGy6G025050 vs. NCBI nr
Match: XP_022977914.1 (NAC domain-containing protein 90-like [Cucurbita maxima])

HSP 1 Score: 237.7 bits (605), Expect = 2.4e-59
Identity = 111/136 (81.62%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           M DY LPPGFRFYPTEEELVSFYL+HKL+GG Q     VDQ IP+L+IY FNPWDLPQFA
Sbjct: 1   MADY-LPPGFRFYPTEEELVSFYLFHKLQGGTQDLIQAVDQTIPLLNIYLFNPWDLPQFA 60

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120
           GEVCKRDE+QWFFFIPRQESEARGGRPKRVT+ GYWKATGSPTYVYSSN HRSIG+KRSM
Sbjct: 61  GEVCKRDEKQWFFFIPRQESEARGGRPKRVTADGYWKATGSPTYVYSSNTHRSIGVKRSM 120

Query: 121 VFYNGRAPREPKLNGK 137
           VFYNGRAP+  K   K
Sbjct: 121 VFYNGRAPKGTKTQWK 135

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BLAST of CsGy6G025050 vs. TAIR10
Match: AT5G22380.1 (NAC domain containing protein 90)

HSP 1 Score: 152.5 bits (384), Expect = 1.8e-37
Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 9   GFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCKRDE 68
           GFRFYPTEEELVSFYL ++LEG     +  + ++IP+LD++   P  LP  AG  C+ D 
Sbjct: 8   GFRFYPTEEELVSFYLRNQLEGRS---DDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDA 67

Query: 69  EQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYNGRAP 128
           EQWFFF+PRQE EARGGRP R T SGYWKATGSP  V+S +N + IG K++MVFY G+AP
Sbjct: 68  EQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDN-KMIGAKKTMVFYTGKAP 127

Query: 129 REPKLNGK 137
              K   K
Sbjct: 128 TGRKTKWK 131

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BLAST of CsGy6G025050 vs. TAIR10
Match: AT3G44350.2 (NAC domain containing protein 61)

HSP 1 Score: 152.1 bits (383), Expect = 2.4e-37
Identity = 74/131 (56.49%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 6   LPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCK 65
           L  GFRFYPTE EL+++YL  +L GG    N  +  +IPILD++   P  LP  AGE C+
Sbjct: 5   LSVGFRFYPTEVELLTYYLRIQLGGG----NATIHSLIPILDVFSVEPTQLPNLAGERCR 64

Query: 66  RDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYNG 125
            D EQW FF+PRQE EARGGRP R T SGYWKATGSP  V+S +N R IG+K++MVFY G
Sbjct: 65  GDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDN-RVIGVKKTMVFYTG 124

Query: 126 RAPREPKLNGK 137
           +AP   K   K
Sbjct: 125 KAPTGRKTKWK 130

[Close]

BLAST of CsGy6G025050 vs. TAIR10
Match: AT1G26870.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 63/132 (47.73%), Postives = 87/132 (65.91%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           MED  L PGFRF+PT+EELVSFYL  K++      N +  ++I  LDIY ++PWDLP+FA
Sbjct: 19  MEDVLL-PGFRFHPTDEELVSFYLKRKVQ-----HNPLSIELIRQLDIYKYDPWDLPKFA 78

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120
                  E++W+F+ PR        RP RVT +G+WKATG+   +YSS  ++ IG+K+S+
Sbjct: 79  ----MTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSL 138

Query: 121 VFYNGRAPREPK 133
           VFY GRA +  K
Sbjct: 139 VFYKGRAAKGVK 140

[Close]

BLAST of CsGy6G025050 vs. TAIR10
Match: AT2G02450.2 (NAC domain containing protein 35)

HSP 1 Score: 124.4 bits (311), Expect = 5.4e-29
Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 0


Query: 8   PGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCKRD 67
           PGFRF+PTEEEL+ FYL  K+EG R  FN    ++I  LD+Y ++PW+LP  A       
Sbjct: 53  PGFRFHPTEEELIEFYLRRKVEGKR--FN---VELITFLDLYRYDPWELPAMAA----IG 112

Query: 68  EEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYNGRA 127
           E++W+F++PR      G RP RVT+SGYWKATG+   + S  + R IG+K+++VFY+G+A
Sbjct: 113 EKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETS-RPIGLKKTLVFYSGKA 164

Query: 128 PR 130
           P+
Sbjct: 173 PK 164

[Close]

BLAST of CsGy6G025050 vs. TAIR10
Match: AT4G17980.1 (NAC domain containing protein 71)

HSP 1 Score: 120.6 bits (301), Expect = 7.7e-28
Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 0


Query: 6   LPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCK 65
           LPPGFRF+PT+EEL+ +YL  K+EG       +  ++IP++D+Y F+PW+LP        
Sbjct: 6   LPPGFRFHPTDEELIGYYLSRKIEGLE-----IELEVIPVIDLYKFDPWELP--GKSFLP 65

Query: 66  RDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYNG 125
             + +WFFF PR +  A G R  R T +GYWKATG    +   ++H   G ++++VFY G
Sbjct: 66  NRDLEWFFFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEG 125

Query: 126 RAPREPKLN 135
           RAP   + N
Sbjct: 126 RAPLGDRTN 127

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BLAST of CsGy6G025050 vs. Swiss-Prot
Match: sp|Q9FMR3|NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-36
Identity = 74/128 (57.81%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 9   GFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCKRDE 68
           GFRFYPTEEELVSFYL ++LEG     +  + ++IP+LD++   P  LP  AG  C+ D 
Sbjct: 8   GFRFYPTEEELVSFYLRNQLEGRS---DDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDA 67

Query: 69  EQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYNGRAP 128
           EQWFFF+PRQE EARGGRP R T SGYWKATGSP  V+S +N + IG K++MVFY G+AP
Sbjct: 68  EQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDN-KMIGAKKTMVFYTGKAP 127

Query: 129 REPKLNGK 137
              K   K
Sbjct: 128 TGRKTKWK 131

[Close]

BLAST of CsGy6G025050 vs. Swiss-Prot
Match: sp|Q9M290|NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC061 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 4.3e-36
Identity = 74/131 (56.49%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 6   LPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCK 65
           L  GFRFYPTE EL+++YL  +L GG    N  +  +IPILD++   P  LP  AGE C+
Sbjct: 5   LSVGFRFYPTEVELLTYYLRIQLGGG----NATIHSLIPILDVFSVEPTQLPNLAGERCR 64

Query: 66  RDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYNG 125
            D EQW FF+PRQE EARGGRP R T SGYWKATGSP  V+S +N R IG+K++MVFY G
Sbjct: 65  GDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDN-RVIGVKKTMVFYTG 124

Query: 126 RAPREPKLNGK 137
           +AP   K   K
Sbjct: 125 KAPTGRKTKWK 130

[Close]

BLAST of CsGy6G025050 vs. Swiss-Prot
Match: sp|Q9ZVH0|FEZ_ARATH (Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-28
Identity = 63/132 (47.73%), Postives = 87/132 (65.91%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           MED  L PGFRF+PT+EELVSFYL  K++      N +  ++I  LDIY ++PWDLP+FA
Sbjct: 12  MEDVLL-PGFRFHPTDEELVSFYLKRKVQ-----HNPLSIELIRQLDIYKYDPWDLPKFA 71

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120
                  E++W+F+ PR        RP RVT +G+WKATG+   +YSS  ++ IG+K+S+
Sbjct: 72  ----MTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSL 131

Query: 121 VFYNGRAPREPK 133
           VFY GRA +  K
Sbjct: 132 VFYKGRAAKGVK 133

[Close]

BLAST of CsGy6G025050 vs. Swiss-Prot
Match: sp|Q9ZVP8|NAC35_ARATH (NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 9.7e-28
Identity = 59/122 (48.36%), Postives = 84/122 (68.85%), Query Frame = 0


Query: 8   PGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCKRD 67
           PGFRF+PTEEEL+ FYL  K+EG R  FN    ++I  LD+Y ++PW+LP  A       
Sbjct: 53  PGFRFHPTEEELIEFYLRRKVEGKR--FN---VELITFLDLYRYDPWELPAMAA----IG 112

Query: 68  EEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMVFYNGRA 127
           E++W+F++PR      G RP RVT+SGYWKATG+   + S  + R IG+K+++VFY+G+A
Sbjct: 113 EKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETS-RPIGLKKTLVFYSGKA 164

Query: 128 PR 130
           P+
Sbjct: 173 PK 164

[Close]

BLAST of CsGy6G025050 vs. Swiss-Prot
Match: sp|Q10S65|NAC22_ORYSJ (NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC022 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 8   PGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAGEVCKRD 67
           PGFRF+PTEEEL+ FYL   + G + +FN     II  L+IY  +PWDLP  A    K  
Sbjct: 19  PGFRFHPTEEELLDFYLSRVVLGKKLHFN-----IIGTLNIYRHDPWDLPGMA----KIG 78

Query: 68  EEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNN-HRSIGIKRSMVFYNGR 127
           E +W+FF+PR      GGRP R T  G+WKATGS   + SS +  R IG+K+++VFY GR
Sbjct: 79  EREWYFFVPRDRKAGNGGRPNRTTERGFWKATGSDRAIRSSGDPKRVIGLKKTLVFYQGR 135

Query: 128 APREPK 133
           APR  K
Sbjct: 139 APRGTK 135

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BLAST of CsGy6G025050 vs. TrEMBL
Match: tr|A0A0A0KKJ2|A0A0A0KKJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452770 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.6e-72
Identity = 129/135 (95.56%), Postives = 130/135 (96.30%), Query Frame = 0


Query: 2   EDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAG 61
           EDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAG
Sbjct: 16  EDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFAG 75

Query: 62  EVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMV 121
           EVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMV
Sbjct: 76  EVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSMV 135

Query: 122 FYNGRAPREPKLNGK 137
           FYNGRAP+  K   K
Sbjct: 136 FYNGRAPKGTKTQWK 150

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BLAST of CsGy6G025050 vs. TrEMBL
Match: tr|A0A1S3CHU2|A0A1S3CHU2_CUCME (NAC domain-containing protein 90-like OS=Cucumis melo OX=3656 GN=LOC103500913 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.2e-72
Identity = 129/136 (94.85%), Postives = 130/136 (95.59%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           ME YTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA
Sbjct: 76  MEGYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 135

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120
           GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM
Sbjct: 136 GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 195

Query: 121 VFYNGRAPREPKLNGK 137
           VFYNGRAP+  K   K
Sbjct: 196 VFYNGRAPKGTKTQWK 211

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BLAST of CsGy6G025050 vs. TrEMBL
Match: tr|A0A1R3IIF7|A0A1R3IIF7_COCAP (No apical meristem (NAM) protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_11975 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-51
Identity = 99/136 (72.79%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           MED  +PPGFRFYPTEEELVSFYL++KLEG R   N ++D++IP++DIY FNPWDLPQF+
Sbjct: 1   MED--MPPGFRFYPTEEELVSFYLHNKLEGNRNDLNHLMDRVIPVVDIYDFNPWDLPQFS 60

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120
             +C +D EQWFFFIPRQESEARGGRPKR+TSSGYWKATGSP YVYSSN+ R IG+KR+M
Sbjct: 61  VLLCHKDPEQWFFFIPRQESEARGGRPKRLTSSGYWKATGSPGYVYSSNS-RPIGVKRTM 120

Query: 121 VFYNGRAPREPKLNGK 137
           VFYNGRAP   K   K
Sbjct: 121 VFYNGRAPSGKKTEWK 133

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BLAST of CsGy6G025050 vs. TrEMBL
Match: tr|B9SWH9|B9SWH9_RICCO (NAC domain-containing protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0293580 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-51
Identity = 100/136 (73.53%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           MED  LPPGFRFYPTEEELVSFYL++KL+G R+  N V+D+IIP+LDIY +NPWDLPQFA
Sbjct: 1   MED--LPPGFRFYPTEEELVSFYLHNKLDGRREDLNRVMDRIIPVLDIYDYNPWDLPQFA 60

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSNNHRSIGIKRSM 120
           G++  RD EQWFFFIPRQESEARGGRPKR+T+ GYWKATGSP  VYS  N+RSIG+KR+M
Sbjct: 61  GDLSSRDPEQWFFFIPRQESEARGGRPKRLTTCGYWKATGSPGQVYS--NNRSIGMKRTM 120

Query: 121 VFYNGRAPREPKLNGK 137
           VFYNGRAP   K + K
Sbjct: 121 VFYNGRAPNGRKTDWK 132

[Close]

BLAST of CsGy6G025050 vs. TrEMBL
Match: tr|A0A2P6RC90|A0A2P6RC90_ROSCH (Putative transcription factor NAM family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0474741 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-51
Identity = 98/139 (70.50%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 1   MEDYTLPPGFRFYPTEEELVSFYLYHKLEGGRQYFNGVVDQIIPILDIYHFNPWDLPQFA 60
           MED+  PPGFRFYPTEEELVSFYL HKL+G R+  N V+D+IIP+LDIY FNPWDLP+ +
Sbjct: 1   MEDF--PPGFRFYPTEEELVSFYLPHKLDGRREDVNRVMDRIIPVLDIYEFNPWDLPRNS 60

Query: 61  GEVCKRDEEQWFFFIPRQESEARGGRPKRVTSSGYWKATGSPTYVYSSN---NHRSIGIK 120
           GE+C  D+EQWFFFIPRQESEARGGRPKR+T++GYWKATGSP+YV+SS+   NH +IG+K
Sbjct: 61  GEMCHGDQEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPSYVFSSSSNTNHGAIGLK 120

Query: 121 RSMVFYNGRAPREPKLNGK 137
           R+MVFY GRAP   K   K
Sbjct: 121 RTMVFYTGRAPNGSKTEWK 137

The following BLAST results are available for this feature:

BLAST of CsGy6G025050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143387.1	1.4e-72	95.59	PREDICTED: NAC domain-containing protein 90-like [Cucumis sativus]	[more]
KGN48276.1	5.5e-72	95.56	hypothetical protein Csa_6G452770 [Cucumis sativus]	[more]
XP_008462590.1	9.4e-72	94.85	PREDICTED: NAC domain-containing protein 90-like [Cucumis melo]	[more]
XP_022926168.1	1.4e-59	82.58	NAC domain-containing protein 90-like [Cucurbita moschata]	[more]
XP_022977914.1	2.4e-59	81.62	NAC domain-containing protein 90-like [Cucurbita maxima]	[more]

BLAST of CsGy6G025050 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22380.1	1.8e-37	57.81	NAC domain containing protein 90	[more]
AT3G44350.2	2.4e-37	56.49	NAC domain containing protein 61	[more]
AT1G26870.1	1.1e-29	47.73	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT2G02450.2	5.4e-29	48.36	NAC domain containing protein 35	[more]
AT4G17980.1	7.7e-28	41.86	NAC domain containing protein 71	[more]

BLAST of CsGy6G025050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FMR3\|NAC90_ARATH	3.3e-36	57.81	NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 ...	[more]
sp\|Q9M290\|NAC61_ARATH	4.3e-36	56.49	Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC...	[more]
sp\|Q9ZVH0\|FEZ_ARATH	1.9e-28	47.73	Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1	[more]
sp\|Q9ZVP8\|NAC35_ARATH	9.7e-28	48.36	NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 ...	[more]
sp\|Q10S65\|NAC22_ORYSJ	1.3e-27	50.00	NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]

BLAST of CsGy6G025050 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KKJ2\|A0A0A0KKJ2_CUCSA	3.6e-72	95.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452770 PE=4 SV=1	[more]
tr\|A0A1S3CHU2\|A0A1S3CHU2_CUCME	6.2e-72	94.85	NAC domain-containing protein 90-like OS=Cucumis melo OX=3656 GN=LOC103500913 PE...	[more]
tr\|A0A1R3IIF7\|A0A1R3IIF7_COCAP	1.2e-51	72.79	No apical meristem (NAM) protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_11...	[more]
tr\|B9SWH9\|B9SWH9_RICCO	2.7e-51	73.53	NAC domain-containing protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0293...	[more]
tr\|A0A2P6RC90\|A0A2P6RC90_ROSCH	2.7e-51	70.50	Putative transcription factor NAM family OS=Rosa chinensis OX=74649 GN=RchiOBHm_...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036093	NAC_dom_sf
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G025050.1	CsGy6G025050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 7..125 e-value: 1.7E-24 score: 87.0
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 6..136 score: 40.338
IPR036093	NAC domain superfamily	GENE3D	G3DSA:3.30.310.150		coord: 15..134 e-value: 2.5E-31 score: 110.6
IPR036093	NAC domain superfamily	SUPERFAMILY	SSF101941	NAC domain	coord: 3..132
None	No IPR available	PANTHER	PTHR31989:SF33	SUBFAMILY NOT NAMED	coord: 5..133
None	No IPR available	PANTHER	PTHR31989	FAMILY NOT NAMED	coord: 5..133

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G025050	Cla018410	Watermelon (97103) v1	cgybwmB475
CsGy6G025050	MELO3C024560	Melon (DHL92) v3.5.1	cgybmeB446
CsGy6G025050	CmoCh03G011360	Cucurbita moschata (Rifu)	cgybcmoB811
CsGy6G025050	MELO3C024561.2	Melon (DHL92) v3.6.1	cgybmedB443
CsGy6G025050	Cla97C02G048380	Watermelon (97103) v2	cgybwmbB414
CsGy6G025050	Cla97C04G077000	Watermelon (97103) v2	cgybwmbB431
CsGy6G025050	Bhi03G001408	Wax gourd	cgybwgoB601
CsGy6G025050	Bhi10G000007	Wax gourd	cgybwgoB586
CsGy6G025050	Carg05355	Silver-seed gourd	carcgybB0799
CsGy6G025050	Carg10491	Silver-seed gourd	carcgybB0255
CsGy6G025050	Carg02644	Silver-seed gourd	carcgybB0916

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G025050	Wild cucumber (PI 183967)	cgybcpiB262
CsGy6G025050	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G025050	Cucumber (Chinese Long) v3	cgybcucB268
CsGy6G025050	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G025050	Watermelon (97103) v2	cgybwmbB398
CsGy6G025050	Wax gourd	cgybwgoB503
CsGy6G025050	Cucumber (Gy14) v2	cgybcgybB100
CsGy6G025050	Cucurbita maxima (Rimu)	cgybcmaB829
CsGy6G025050	Cucurbita maxima (Rimu)	cgybcmaB831
CsGy6G025050	Cucurbita maxima (Rimu)	cgybcmaB851
CsGy6G025050	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G025050	Cucurbita moschata (Rifu)	cgybcmoB808
CsGy6G025050	Cucurbita moschata (Rifu)	cgybcmoB833
CsGy6G025050	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G025050	Cucurbita pepo (Zucchini)	cgybcpeB710
CsGy6G025050	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G025050	Cucurbita pepo (Zucchini)	cgybcpeB865
CsGy6G025050	Cucurbita pepo (Zucchini)	cgybcpeB888
CsGy6G025050	Cucumber (Chinese Long) v2	cgybcuB255
CsGy6G025050	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G025050	Bottle gourd (USVL1VR-Ls)	cgyblsiB384
CsGy6G025050	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G025050	Bottle gourd (USVL1VR-Ls)	cgyblsiB410
CsGy6G025050	Melon (DHL92) v3.5.1	cgybmeB424
CsGy6G025050	Melon (DHL92) v3.6.1	cgybmedB420
CsGy6G025050	Watermelon (Charleston Gray)	cgybwcgB392
CsGy6G025050	Watermelon (Charleston Gray)	cgybwcgB406
CsGy6G025050	Watermelon (Charleston Gray)	cgybwcgB426
CsGy6G025050	Watermelon (97103) v1	cgybwmB423
CsGy6G025050	Watermelon (97103) v1	cgybwmB483
CsGy6G025050	Watermelon (97103) v1	cgybwmB472