Carg02644 (gene) Silver-seed gourd

Overview
NameCarg02644
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionNAC domain containing protein
LocationCucurbita_argyrosperma_scaffold_009 : 1059752 .. 1060485 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAGGCTCGTCGGACGGCAGGGGAAGAACCGGCGGACGGGGAGATCACACCCGGGTTTAGATTCTTCCCCACGGAGGAGGAACTGGTGTCGTTCTATTTGCACAACCAGCTCCAAGGGCGGCGCAAGGACATCCACCGCGTCATTCCGGTCGTCGACATTTACAGCATTGAGCCGTTCAATCTCTCCGGTATGTAATTTTAACTGTAATTATAAACACCCGGCGGCGGTTTTTTGATTAATTTTATGTTTTGGGTTTCAGGGTGTTCGGGAGAGCGGTGTCGGCGGGACAGTGAGCAGTGGTTTTTCTTTGTCAAGCAACAAGAGAGGGAAGCGAGAGGAGGGAGGCCGAATAGAACGACGTCGTCTGGATCTGGCTATTGGAAAGCCACCGGATCGCCGAGTTATGTTTACTCTTCCGATAATAGAGTCATCGGAGTTAAGAAAACGATGGTGTTTTATAGAGGGAAAGCGCCCACCGGAACCAAGACGAAGTGGAAGATGAACGAATATAAAGCCATTGAAGACGATTATTCCAATTCCTCGTCTATTCCCACTCCCGAGGTAACAGAATTACGAATTTAATTAATTTTTTTTTAAATTATTATTATTATTATTCTAAAATAAACATGAATTGGCAGTTACGACATGAGTTCAGTTTGTGCCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAATGTCGCAACTGA

mRNA sequence

ATGGATGAGGCTCGTCGGACGGCAGGGGAAGAACCGGCGGACGGGGAGATCACACCCGGGTTTAGATTCTTCCCCACGGAGGAGGAACTGGTGTCGTTCTATTTGCACAACCAGCTCCAAGGGCGGCGCAAGGACATCCACCGCGTCATTCCGGTCGTCGACATTTACAGCATTGAGCCGTTCAATCTCTCCGGGTGTTCGGGAGAGCGGTGTCGGCGGGACAGTGAGCAGTGGTTTTTCTTTGTCAAGCAACAAGAGAGGGAAGCGAGAGGAGGGAGGCCGAATAGAACGACGTCGTCTGGATCTGGCTATTGGAAAGCCACCGGATCGCCGAGTTATGTTTACTCTTCCGATAATAGAGTCATCGGAGTTAAGAAAACGATGGTGTTTTATAGAGGGAAAGCGCCCACCGGAACCAAGACGAAGTGGAAGATGAACGAATATAAAGCCATTGAAGACGATTATTCCAATTCCTCGTCTATTCCCACTCCCGAGTTACGACATGAGTTCAGTTTGTGCCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAATGTCGCAACTGA

Coding sequence (CDS)

ATGGATGAGGCTCGTCGGACGGCAGGGGAAGAACCGGCGGACGGGGAGATCACACCCGGGTTTAGATTCTTCCCCACGGAGGAGGAACTGGTGTCGTTCTATTTGCACAACCAGCTCCAAGGGCGGCGCAAGGACATCCACCGCGTCATTCCGGTCGTCGACATTTACAGCATTGAGCCGTTCAATCTCTCCGGGTGTTCGGGAGAGCGGTGTCGGCGGGACAGTGAGCAGTGGTTTTTCTTTGTCAAGCAACAAGAGAGGGAAGCGAGAGGAGGGAGGCCGAATAGAACGACGTCGTCTGGATCTGGCTATTGGAAAGCCACCGGATCGCCGAGTTATGTTTACTCTTCCGATAATAGAGTCATCGGAGTTAAGAAAACGATGGTGTTTTATAGAGGGAAAGCGCCCACCGGAACCAAGACGAAGTGGAAGATGAACGAATATAAAGCCATTGAAGACGATTATTCCAATTCCTCGTCTATTCCCACTCCCGAGTTACGACATGAGTTCAGTTTGTGCCGAGTTTACGTGGTGTCGGGAAGCTTTCGAGCATTTGATCGGCGGCCATTAAAATGTCGCAACTGA

Protein sequence

MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRPLKCRN
Homology
[Close]
BLAST of Carg02644 vs. NCBI nr
Match: XP_022958454.1 (NAC domain-containing protein 90 [Cucurbita moschata])

HSP 1 Score: 407.1 bits (1045), Expect = 3.3e-110
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 

Query: 1   MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60
           MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP
Sbjct: 1   MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60

Query: 61  FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120
           FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR
Sbjct: 61  FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG 180

Query: 181 SFRAFDRRPLKCRN 195
           SFRAFDRRPLKCRN
Sbjct: 181 SFRAFDRRPLKCRN 194

[Close]
BLAST of Carg02644 vs. NCBI nr
Match: XP_023533663.1 (NAC domain-containing protein 90 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.1 bits (1037), Expect = 2.8e-109
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0 

Query: 1   MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60
           MDEARRTAGEEPAD EITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP
Sbjct: 1   MDEARRTAGEEPADREITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60

Query: 61  FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120
           FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR
Sbjct: 61  FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG 180

Query: 181 SFRAFDRRPLKCRN 195
           SFRAFDRRPLKCRN
Sbjct: 181 SFRAFDRRPLKCRN 194

[Close]
BLAST of Carg02644 vs. NCBI nr
Match: XP_022995147.1 (NAC domain-containing protein 90 [Cucurbita maxima])

HSP 1 Score: 391.0 bits (1003), Expect = 2.4e-105
Identity = 189/194 (97.42%), Postives = 189/194 (97.42%), Query Frame = 0 

Query: 1   MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60
           MDEA RTAGEE AD EITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP
Sbjct: 1   MDEAHRTAGEELADREITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60

Query: 61  FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120
           FNLS  SGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR
Sbjct: 61  FNLSRWSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG 180

Query: 181 SFRAFDRRPLKCRN 195
           SFRAFDRRPLKCRN
Sbjct: 181 SFRAFDRRPLKCRN 194

[Close]
BLAST of Carg02644 vs. NCBI nr
Match: XP_022153005.1 (NAC domain-containing protein 90-like [Momordica charantia])

HSP 1 Score: 332.4 bits (851), Expect = 1.0e-87
Identity = 161/194 (82.99%), Postives = 176/194 (90.72%), Query Frame = 0 

Query: 1   MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60
           MDE  R  GEE A  E+ PGFRFFPTEEEL+SFYLHNQLQGRR++IHRVIPV++IYSIEP
Sbjct: 13  MDEVVR--GEEEAAQELLPGFRFFPTEEELISFYLHNQLQGRRREIHRVIPVLBIYSIEP 72

Query: 61  FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120
           FNLS  SGERCRR+ EQWFFFVKQQ+REARGGRPNRTTSSGSGYWKATGSP YVYSSDNR
Sbjct: 73  FNLSRYSGERCRREREQWFFFVKQQDREARGGRPNRTTSSGSGYWKATGSPGYVYSSDNR 132

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSG 180
           VIG+KKTMVFY+GKAPTGTKTKWKMNEYKAI+D  ++SSS  TPELRHEFSLCR+YVVSG
Sbjct: 133 VIGLKKTMVFYKGKAPTGTKTKWKMNEYKAIQDHQTSSSS--TPELRHEFSLCRIYVVSG 192

Query: 181 SFRAFDRRPLKCRN 195
           SFRAFDRRPL+  N
Sbjct: 193 SFRAFDRRPLEVCN 202

[Close]
BLAST of Carg02644 vs. NCBI nr
Match: XP_008449583.1 (PREDICTED: NAC domain-containing protein 90 [Cucumis melo])

HSP 1 Score: 327.0 bits (837), Expect = 4.3e-86
Identity = 160/188 (85.11%), Postives = 168/188 (89.36%), Query Frame = 0 

Query: 10  EEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGE 69
           EE  + +I PGFRFFPTEEELV FYLHNQLQG RKDIHRVIPVVDIY IEPFNLS  SGE
Sbjct: 13  EEEEEDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEPFNLSRYSGE 72

Query: 70  RCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMV 129
           RCRRDSEQWFFFVKQQEREARGGR NRTTSSGSGYWKATGSP+YVYSS+NRVIGVKKTMV
Sbjct: 73  RCRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMV 132

Query: 130 FYRGKAPTGTKTKWKMNEYKAIED---DYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFD 189
           FYRGKAPTGTKTKWKMNEYKAI+D    +  SSS P P+LRHEFSLCRVYVVSGSFRAFD
Sbjct: 133 FYRGKAPTGTKTKWKMNEYKAIQDIIPPHYPSSSTPIPQLRHEFSLCRVYVVSGSFRAFD 192

Query: 190 RRPLKCRN 195
           RRPL+  N
Sbjct: 193 RRPLEVYN 200

[Close]
BLAST of Carg02644 vs. TAIR10
Match: AT5G22380.1 (NAC domain containing protein 90)

HSP 1 Score: 250.8 bits (639), Expect = 7.1e-67
Identity = 122/175 (69.71%), Postives = 145/175 (82.86%), Query Frame = 0 

Query: 16  EITPGFRFFPTEEELVSFYLHNQLQGRRKD-IHRVIPVVDIYSIEPFNLSGCSGERCRRD 75
           E+T GFRF+PTEEELVSFYL NQL+GR  D +HRVIPV+D++ +EP +L   +G RCR D
Sbjct: 4   EVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGD 63

Query: 76  SEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGK 135
           +EQWFFFV +QEREARGGRP+RTT  GSGYWKATGSP  V+S DN++IG KKTMVFY GK
Sbjct: 64  AEQWFFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGK 123

Query: 136 APTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRP 190
           APTG KTKWKMNEY A+ D+  N+S+I  P+LR EFSLCRVY+ +GS RAFDRRP
Sbjct: 124 APTGRKTKWKMNEYHAV-DETVNASTI--PKLRREFSLCRVYITTGSSRAFDRRP 173

[Close]
BLAST of Carg02644 vs. TAIR10
Match: AT3G44350.2 (NAC domain containing protein 61)

HSP 1 Score: 239.2 bits (609), Expect = 2.1e-63
Identity = 115/175 (65.71%), Postives = 140/175 (80.00%), Query Frame = 0 

Query: 16  EITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDS 75
           E++ GFRF+PTE EL+++YL  QL G    IH +IP++D++S+EP  L   +GERCR D+
Sbjct: 4   ELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDA 63

Query: 76  EQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGKA 135
           EQW FFV +QEREARGGRP+RTT  GSGYWKATGSP  V+S DNRVIGVKKTMVFY GKA
Sbjct: 64  EQWIFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKA 123

Query: 136 PTGTKTKWKMNEYKAIEDDYSNSSSIPT-PELRHEFSLCRVYVVSGSFRAFDRRP 190
           PTG KTKWKMNEYKA+E     ++S+ T P+LR EFS+CR+Y+ SGS RAFDRRP
Sbjct: 124 PTGRKTKWKMNEYKAVE-----TASVSTIPKLRPEFSICRIYIKSGSSRAFDRRP 171

[Close]
BLAST of Carg02644 vs. TAIR10
Match: AT2G17040.1 (NAC domain containing protein 36)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-32
Identity = 74/172 (43.02%), Postives = 106/172 (61.63%), Query Frame = 0 

Query: 19  PGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDSEQW 78
           PGFRF PTEEEL+ FYL N + G+R  +  VI  ++IY  +P++L G S    R    +W
Sbjct: 8   PGFRFHPTEEELLDFYLKNMVYGKRSSV-EVIGFLNIYRHDPWDLPGLS----RIGEREW 67

Query: 79  FFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYV--YSSDNRVIGVKKTMVFYRGKAP 138
           +FFV ++ +   GGRP+RTT    GYWKATGS   +   S   RVIG+KKT+VFYRG+AP
Sbjct: 68  YFFVPRERKHGNGGRPSRTTE--KGYWKATGSDRKIISLSEPKRVIGLKKTLVFYRGRAP 127

Query: 139 TGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRR 189
            G+KT W MNE++       ++ S+P      +  LC++Y  + S +  ++R
Sbjct: 128 GGSKTDWVMNEFR-----MPDNCSLP-----KDVVLCKIYRKATSLKVLEQR 162

[Close]
BLAST of Carg02644 vs. TAIR10
Match: AT2G02450.2 (NAC domain containing protein 35)

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-31
Identity = 69/162 (42.59%), Postives = 99/162 (61.11%), Query Frame = 0 

Query: 17  ITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCS--GERCRRD 76
           + PGFRF PTEEEL+ FYL  +++G+R ++  +I  +D+Y  +P+ L   +  GE+    
Sbjct: 51  VMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEK---- 110

Query: 77  SEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGK 136
             +W+F+V +  +   G RPNR T+  SGYWKATG+   + S  +R IG+KKT+VFY GK
Sbjct: 111 --EWYFYVPRDRKYRNGDRPNRVTT--SGYWKATGADRMIRSETSRPIGLKKTLVFYSGK 170

Query: 137 APTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVY 177
           AP GT+T W MNEY+    +            + E SLCRVY
Sbjct: 171 APKGTRTSWIMNEYRLPHHETEKYQ-------KAEISLCRVY 196

[Close]
BLAST of Carg02644 vs. TAIR10
Match: AT4G17980.1 (NAC domain containing protein 71)

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-30
Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 0 

Query: 17  ITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDSE 76
           + PGFRF PT+EEL+ +YL  +++G   ++  VIPV+D+Y  +P+ L G S     RD E
Sbjct: 6   LPPGFRFHPTDEELIGYYLSRKIEGLEIEL-EVIPVIDLYKFDPWELPGKS-FLPNRDLE 65

Query: 77  QWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVI-GVKKTMVFYRGKA 136
            WFFF  + ++ A G R NR T   +GYWKATG    +    + VI G +KT+VFY G+A
Sbjct: 66  -WFFFCPRDKKYANGSRTNRATK--AGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRA 125

Query: 137 PTGTKTKWKMNEYKAIE-DDYSNSSSIPTPELRHEFSLCRV 176
           P G +T W M+EY+  + DD+S  S    P  +  F+LCRV
Sbjct: 126 PLGDRTNWFMHEYRLCDIDDHSQKS----PNFKGAFALCRV 157

[Close]
BLAST of Carg02644 vs. Swiss-Prot
Match: sp|Q9FMR3|NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-65
Identity = 122/175 (69.71%), Postives = 145/175 (82.86%), Query Frame = 0 

Query: 16  EITPGFRFFPTEEELVSFYLHNQLQGRRKD-IHRVIPVVDIYSIEPFNLSGCSGERCRRD 75
           E+T GFRF+PTEEELVSFYL NQL+GR  D +HRVIPV+D++ +EP +L   +G RCR D
Sbjct: 4   EVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGD 63

Query: 76  SEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGK 135
           +EQWFFFV +QEREARGGRP+RTT  GSGYWKATGSP  V+S DN++IG KKTMVFY GK
Sbjct: 64  AEQWFFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGK 123

Query: 136 APTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRP 190
           APTG KTKWKMNEY A+ D+  N+S+I  P+LR EFSLCRVY+ +GS RAFDRRP
Sbjct: 124 APTGRKTKWKMNEYHAV-DETVNASTI--PKLRREFSLCRVYITTGSSRAFDRRP 173

[Close]
BLAST of Carg02644 vs. Swiss-Prot
Match: sp|Q9M290|NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC061 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.0e-54
Identity = 107/174 (61.49%), Postives = 128/174 (73.56%), Query Frame = 0 

Query: 16  EITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDS 75
           E++ GFRF+PTE EL+++YL  QL G    IH +IP++D++S+EP  L   +GERCR D+
Sbjct: 4   ELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDA 63

Query: 76  EQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGKA 135
           EQW FFV +QEREARGGRP+RTT  GSGYWKATGSP  V+S DNRVIGVKKTMVFY GKA
Sbjct: 64  EQWIFFVPRQEREARGGRPSRTT--GSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKA 123

Query: 136 PTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRP 190
           PTG KTKWKMNEYKA+E   ++ S+IP                SGS RAFDRRP
Sbjct: 124 PTGRKTKWKMNEYKAVET--ASVSTIPK---------------SGSSRAFDRRP 158

[Close]
BLAST of Carg02644 vs. Swiss-Prot
Match: sp|Q10S65|NAC22_ORYSJ (NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC022 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-30
Identity = 78/192 (40.62%), Postives = 113/192 (58.85%), Query Frame = 0 

Query: 1   MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60
           M  A   AG      +  PGFRF PTEEEL+ FYL   + G++   + +I  ++IY  +P
Sbjct: 1   MAAAVAVAGPSMEVEQDLPGFRFHPTEEELLDFYLSRVVLGKKLHFN-IIGTLNIYRHDP 60

Query: 61  FNLSGCS--GERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSD 120
           ++L G +  GER      +W+FFV +  +   GGRPNRTT    G+WKATGS   + SS 
Sbjct: 61  WDLPGMAKIGER------EWYFFVPRDRKAGNGGRPNRTTE--RGFWKATGSDRAIRSSG 120

Query: 121 N--RVIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVY 180
           +  RVIG+KKT+VFY+G+AP GTKT W MNEY+    DY  ++    P  + +  LC++Y
Sbjct: 121 DPKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRL--PDY-GAARAAAPPPKEDMVLCKIY 180

Query: 181 VVSGSFRAFDRR 189
             +   +  ++R
Sbjct: 181 RKATPLKELEQR 180

[Close]
BLAST of Carg02644 vs. Swiss-Prot
Match: sp|Q9ZVP8|NAC35_ARATH (NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-30
Identity = 69/162 (42.59%), Postives = 99/162 (61.11%), Query Frame = 0 

Query: 17  ITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCS--GERCRRD 76
           + PGFRF PTEEEL+ FYL  +++G+R ++  +I  +D+Y  +P+ L   +  GE+    
Sbjct: 51  VMPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEK---- 110

Query: 77  SEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGK 136
             +W+F+V +  +   G RPNR T+  SGYWKATG+   + S  +R IG+KKT+VFY GK
Sbjct: 111 --EWYFYVPRDRKYRNGDRPNRVTT--SGYWKATGADRMIRSETSRPIGLKKTLVFYSGK 170

Query: 137 APTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVY 177
           AP GT+T W MNEY+    +            + E SLCRVY
Sbjct: 171 APKGTRTSWIMNEYRLPHHETEKYQ-------KAEISLCRVY 196

[Close]
BLAST of Carg02644 vs. Swiss-Prot
Match: sp|O49697|NAC71_ARATH (NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.6e-29
Identity = 70/161 (43.48%), Postives = 99/161 (61.49%), Query Frame = 0 

Query: 17  ITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDSE 76
           + PGFRF PT+EEL+ +YL  +++G   ++  VIPV+D+Y  +P+ L G S     RD E
Sbjct: 6   LPPGFRFHPTDEELIGYYLSRKIEGLEIEL-EVIPVIDLYKFDPWELPGKS-FLPNRDLE 65

Query: 77  QWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVI-GVKKTMVFYRGKA 136
            WFFF  + ++ A G R NR T   +GYWKATG    +    + VI G +KT+VFY G+A
Sbjct: 66  -WFFFCPRDKKYANGSRTNRATK--AGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRA 125

Query: 137 PTGTKTKWKMNEYKAIE-DDYSNSSSIPTPELRHEFSLCRV 176
           P G +T W M+EY+  + DD+S  S    P  +  F+LCRV
Sbjct: 126 PLGDRTNWFMHEYRLCDIDDHSQKS----PNFKGAFALCRV 157

[Close]
BLAST of Carg02644 vs. TrEMBL
Match: tr|A0A1S3BMD5|A0A1S3BMD5_CUCME (NAC domain-containing protein 90 OS=Cucumis melo OX=3656 GN=LOC103491423 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.8e-86
Identity = 160/188 (85.11%), Postives = 168/188 (89.36%), Query Frame = 0 

Query: 10  EEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGE 69
           EE  + +I PGFRFFPTEEELV FYLHNQLQG RKDIHRVIPVVDIY IEPFNLS  SGE
Sbjct: 13  EEEEEDQILPGFRFFPTEEELVLFYLHNQLQGWRKDIHRVIPVVDIYEIEPFNLSRYSGE 72

Query: 70  RCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMV 129
           RCRRDSEQWFFFVKQQEREARGGR NRTTSSGSGYWKATGSP+YVYSS+NRVIGVKKTMV
Sbjct: 73  RCRRDSEQWFFFVKQQEREARGGRANRTTSSGSGYWKATGSPTYVYSSENRVIGVKKTMV 132

Query: 130 FYRGKAPTGTKTKWKMNEYKAIED---DYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFD 189
           FYRGKAPTGTKTKWKMNEYKAI+D    +  SSS P P+LRHEFSLCRVYVVSGSFRAFD
Sbjct: 133 FYRGKAPTGTKTKWKMNEYKAIQDIIPPHYPSSSTPIPQLRHEFSLCRVYVVSGSFRAFD 192

Query: 190 RRPLKCRN 195
           RRPL+  N
Sbjct: 193 RRPLEVYN 200

[Close]
BLAST of Carg02644 vs. TrEMBL
Match: tr|A0A0A0KEE9|A0A0A0KEE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425720 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.1e-85
Identity = 160/194 (82.47%), Postives = 169/194 (87.11%), Query Frame = 0 

Query: 1   MDEARRTAGEEPADGEITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEP 60
           MD  +    EE  + +  PGFRFFPTEEELV FYLHNQLQG RKDIHRVIPVVDIY IEP
Sbjct: 1   MDHDQVIIREEEEEDQSLPGFRFFPTEEELVLFYLHNQLQGCRKDIHRVIPVVDIYEIEP 60

Query: 61  FNLSGCSGERCRRDSEQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNR 120
           FNLS  SGERCRRDSEQWFFFVKQQER+ARGGR NRTTSSGSGYWKATGSP+YVYSS+NR
Sbjct: 61  FNLSRYSGERCRRDSEQWFFFVKQQERQARGGRANRTTSSGSGYWKATGSPTYVYSSENR 120

Query: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIED---DYSNSSSIPTPELRHEFSLCRVYV 180
           VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAI+D    +S  SS P P+LRHEFSLCRVYV
Sbjct: 121 VIGVKKTMVFYRGKAPTGTKTKWKMNEYKAIQDIIPPHSPFSSTPIPQLRHEFSLCRVYV 180

Query: 181 VSGSFRAFDRRPLK 192
           VSGSFRAFDRRPLK
Sbjct: 181 VSGSFRAFDRRPLK 194

[Close]
BLAST of Carg02644 vs. TrEMBL
Match: tr|A0A2C9V1V9|A0A2C9V1V9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G163400 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 7.2e-74
Identity = 133/176 (75.57%), Postives = 157/176 (89.20%), Query Frame = 0 

Query: 16  EITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDS 75
           E+ PGFRF+PTEEELVSFYLHN+L G+R+++HRVIPV+DIY+IEP+NL   +GERCR D+
Sbjct: 3   ELPPGFRFYPTEEELVSFYLHNKLDGKRQELHRVIPVIDIYNIEPWNLPMLAGERCRGDT 62

Query: 76  EQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGKA 135
           EQWFFF  +QEREARGGRP+RTT+  SGYWKATGSP YVYSSD+RVIGVKKTMVFY+GKA
Sbjct: 63  EQWFFFTPRQEREARGGRPSRTTA--SGYWKATGSPGYVYSSDSRVIGVKKTMVFYKGKA 122

Query: 136 PTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRPLK 192
           P G KTKWKMNEY+AIE   ++SSS   P+LRHEFSLCRVYV+SGSFRAFDRRP++
Sbjct: 123 PAGRKTKWKMNEYRAIE-GVADSSSTSVPKLRHEFSLCRVYVISGSFRAFDRRPIE 175

[Close]
BLAST of Carg02644 vs. TrEMBL
Match: tr|A0A2P5CPI6|A0A2P5CPI6_9ROSA (NAC domain containing protein OS=Trema orientalis OX=63057 GN=TorNAC45 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 6.1e-73
Identity = 134/176 (76.14%), Postives = 156/176 (88.64%), Query Frame = 0 

Query: 16  EITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDS 75
           E+ PGFRF+PTEEELVSFYL N+L+ +R DI+RVI V+DIYSIEP++L   SGE C+ D+
Sbjct: 3   ELPPGFRFYPTEEELVSFYLRNKLEAKRDDINRVIKVIDIYSIEPWDLPKYSGELCQGDT 62

Query: 76  EQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGKA 135
           EQWFFF  +QEREARGGRPNRTT+  SGYWKATGSPSYV+SSDNRVIGVKKTMVFY+GKA
Sbjct: 63  EQWFFFTPRQEREARGGRPNRTTA--SGYWKATGSPSYVFSSDNRVIGVKKTMVFYKGKA 122

Query: 136 PTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRPLK 192
           PTG KTKWKMNEY+AIE + +N +S+ TP LRHEFSLCRVYV+SGSFRAFDRRP+K
Sbjct: 123 PTGRKTKWKMNEYRAIE-EVNNPNSVTTPMLRHEFSLCRVYVISGSFRAFDRRPIK 175

[Close]
BLAST of Carg02644 vs. TrEMBL
Match: tr|A0A2P5CWM2|A0A2P5CWM2_PARAD (NAC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanNAC45 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 6.8e-72
Identity = 131/176 (74.43%), Postives = 155/176 (88.07%), Query Frame = 0 

Query: 16  EITPGFRFFPTEEELVSFYLHNQLQGRRKDIHRVIPVVDIYSIEPFNLSGCSGERCRRDS 75
           E+ PGFRF+PTEEELVSFYL N+L+ +R DI+RV+ V+DIYSIEP++L   SGE C+ D+
Sbjct: 3   ELPPGFRFYPTEEELVSFYLRNKLEAKRDDINRVVKVIDIYSIEPWDLPKYSGELCQGDT 62

Query: 76  EQWFFFVKQQEREARGGRPNRTTSSGSGYWKATGSPSYVYSSDNRVIGVKKTMVFYRGKA 135
           EQWFFF  +QEREARGG+PNRTT+  SGYWKATGSPSYV+SSDNRVIGVKKTMVFY+GKA
Sbjct: 63  EQWFFFTPRQEREARGGKPNRTTA--SGYWKATGSPSYVFSSDNRVIGVKKTMVFYKGKA 122

Query: 136 PTGTKTKWKMNEYKAIEDDYSNSSSIPTPELRHEFSLCRVYVVSGSFRAFDRRPLK 192
           PTG KTKWKMNEY+AIE + +N +S+ TP LRHEFSLCRVYV+SG FRAFDRRP+K
Sbjct: 123 PTGRKTKWKMNEYRAIE-EVNNPNSVTTPMLRHEFSLCRVYVISGCFRAFDRRPIK 175

The following BLAST results are available for this feature:
BLAST of Carg02644 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022958454.13.3e-110100.00NAC domain-containing protein 90 [Cucurbita moschata][more]
XP_023533663.12.8e-10999.48NAC domain-containing protein 90 [Cucurbita pepo subsp. pepo][more]
XP_022995147.12.4e-10597.42NAC domain-containing protein 90 [Cucurbita maxima][more]
XP_022153005.11.0e-8782.99NAC domain-containing protein 90-like [Momordica charantia][more]
XP_008449583.14.3e-8685.11PREDICTED: NAC domain-containing protein 90 [Cucumis melo][more]
BLAST of Carg02644 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22380.17.1e-6769.71NAC domain containing protein 90[more]
AT3G44350.22.1e-6365.71NAC domain containing protein 61[more]
AT2G17040.11.1e-3243.02NAC domain containing protein 36[more]
AT2G02450.21.3e-3142.59NAC domain containing protein 35[more]
AT4G17980.15.3e-3043.48NAC domain containing protein 71[more]
BLAST of Carg02644 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FMR3|NAC90_ARATH1.3e-6569.71NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 ... [more]
sp|Q9M290|NAC61_ARATH5.0e-5461.49Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC... [more]
sp|Q10S65|NAC22_ORYSJ1.0e-3040.63NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC... [more]
sp|Q9ZVP8|NAC35_ARATH2.3e-3042.59NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 ... [more]
sp|O49697|NAC71_ARATH9.6e-2943.48NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 ... [more]
BLAST of Carg02644 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BMD5|A0A1S3BMD5_CUCME2.8e-8685.11NAC domain-containing protein 90 OS=Cucumis melo OX=3656 GN=LOC103491423 PE=4 SV... [more]
tr|A0A0A0KEE9|A0A0A0KEE9_CUCSA1.1e-8582.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425720 PE=4 SV=1[more]
tr|A0A2C9V1V9|A0A2C9V1V9_MANES7.2e-7475.57Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G163400 PE=4 SV=... [more]
tr|A0A2P5CPI6|A0A2P5CPI6_9ROSA6.1e-7376.14NAC domain containing protein OS=Trema orientalis OX=63057 GN=TorNAC45 PE=4 SV=1[more]
tr|A0A2P5CWM2|A0A2P5CWM2_PARAD6.8e-7274.43NAC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanNAC45 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR036093NAC_dom_sf
IPR003441NAC-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02644-RACarg02644-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 19..149
e-value: 4.7E-27
score: 95.2
IPR003441NAC domainPROSITEPS51005NACcoord: 17..178
score: 46.189
IPR036093NAC domain superfamilyGENE3DG3DSA:3.30.310.150coord: 26..182
e-value: 7.5E-42
score: 144.7
IPR036093NAC domain superfamilySUPERFAMILYSSF101941NAC domaincoord: 17..177
NoneNo IPR availablePANTHERPTHR31989:SF4NAC DOMAIN-CONTAINING PROTEIN 61-RELATEDcoord: 16..191
NoneNo IPR availablePANTHERPTHR31989FAMILY NOT NAMEDcoord: 16..191

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg02644Cla018410Watermelon (97103) v1carwmB0927
Carg02644Cla008633Watermelon (97103) v1carwmB0928
Carg02644Csa6G452770Cucumber (Chinese Long) v2carcuB0943
Carg02644Csa6G425720Cucumber (Chinese Long) v2carcuB0941
Carg02644MELO3C024561Melon (DHL92) v3.5.1carmeB0912
Carg02644MELO3C014505Melon (DHL92) v3.5.1carmeB0910
Carg02644ClCG04G010190Watermelon (Charleston Gray)carwcgB0902
Carg02644ClCG02G022280Watermelon (Charleston Gray)carwcgB0900
Carg02644CSPI06G23280Wild cucumber (PI 183967)carcpiB0963
Carg02644CSPI06G25610Wild cucumber (PI 183967)carcpiB0965
Carg02644Cucsa.185760Cucumber (Gy14) v1carcgyB1041
Carg02644Cucsa.083530Cucumber (Gy14) v1carcgyB1035
Carg02644CmaCh02G013170Cucurbita maxima (Rimu)carcmaB1268
Carg02644CmaCh03G011440Cucurbita maxima (Rimu)carcmaB1269
Carg02644CmaCh07G008440Cucurbita maxima (Rimu)carcmaB1272
Carg02644CmoCh02G013560Cucurbita moschata (Rifu)carcmoB1237
Carg02644CmoCh07G008750Cucurbita moschata (Rifu)carcmoB1242
Carg02644CmoCh03G011360Cucurbita moschata (Rifu)carcmoB1238
Carg02644Lsi10G011490Bottle gourd (USVL1VR-Ls)carlsiB838
Carg02644Cp4.1LG05g04140Cucurbita pepo (Zucchini)carcpeB1284
Carg02644Cp4.1LG19g05060Cucurbita pepo (Zucchini)carcpeB1277
Carg02644CsGy6G022530Cucumber (Gy14) v2carcgybB0914
Carg02644CsGy6G025050Cucumber (Gy14) v2carcgybB0916
Carg02644MELO3C014505.2Melon (DHL92) v3.6.1carmedB0917
Carg02644CsaV3_6G040810Cucumber (Chinese Long) v3carcucB0967
Carg02644CsaV3_6G038410Cucumber (Chinese Long) v3carcucB0965
Carg02644Cla97C01G011470Watermelon (97103) v2carwmbB0964
Carg02644Cla97C02G048380Watermelon (97103) v2carwmbB0966
Carg02644Cla97C04G077000Watermelon (97103) v2carwmbB0968
Carg02644Bhi10G000007Wax gourdcarwgoB1068
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg02644Carg10491Silver-seed gourdcarcarB281
The following block(s) are covering this gene:
GeneOrganismBlock
Carg02644Silver-seed gourdcarcarB294
Carg02644Silver-seed gourdcarcarB433
Carg02644Cucumber (Gy14) v2carcgybB0904
Carg02644Cucurbita maxima (Rimu)carcmaB1267
Carg02644Cucurbita maxima (Rimu)carcmaB1270
Carg02644Cucurbita moschata (Rifu)carcmoB1229
Carg02644Cucurbita moschata (Rifu)carcmoB1236
Carg02644Cucurbita moschata (Rifu)carcmoB1239
Carg02644Cucurbita pepo (Zucchini)carcpeB1273
Carg02644Cucurbita pepo (Zucchini)carcpeB1280
Carg02644Cucurbita pepo (Zucchini)carcpeB1283
Carg02644Cucurbita pepo (Zucchini)carcpeB1286
Carg02644Cucumber (Chinese Long) v2carcuB0931
Carg02644Watermelon (Charleston Gray)carwcgB0895
Carg02644Watermelon (97103) v1carwmB0918