CsGy6G016950 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G016950
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 16411171 .. 16413044 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTAAATTACTATTTTAATCGAAATCGAGAAAGTTGGGGAACAATCGTGTTGTTGGTGCTGCAATATGGGTACTCTAGAACTAGGCTTGCTTTATTATCCTTAGCATGCCGGATCATGTCCGCCATGGAAGCTACACAAACGAACTTCGTGACCTTTATCTTCTTGCAGTGTCCCATATCTGGTGGATGTTTCCCGGCATCTCGTCAAGGGAGTCTAATTCTTCGTCAATGGGAGTTGAAAAGCGAACAGCATTATAGTTTGCGATCGAGGAACATCCACTGTGAGATGAGATGACTGGTAAATTTCATTTTATTCTATATAGACACTAAACTAAATTTCTAATCGTTTTTGTCATTCTTCATTATCTGTAATTTTCTTTACTAATTAGGAAATTTCACTTTTCAAACACGATGCATTTCACCCAATTTCTTGTGTTTGTTCTTTTCCTTGCTCCTATTGAGCCTGTTGTTTCGAATTAGAAAAGCAAATTTGTTCTTATCGTTATGGAGATTCCCCATTCATTCCCCTGCATGACGGTCGTTTTCAGGTCGTTTCATTACTATATATCATCGTCGTCGTGGAAATGGAATTTGATTGGTTATGTAGAATCTTGCATTGGTGGTCCATGTTGTAAAGTATGCGCGCCACTACTGTTGCACGCTAGGTGTTTGATGTAATGTCTCTGCATAATTTGGTTACCCCCTGCATAGTTTTTTTTTTCTTTTCTTTTTTCCTACTTTCTCTAATACGAAAAGTCTTAGCTAATCATTTCTAGGTATAAGATTGAATTATCTCTAGACTGGTCGGATGGTAATCTGTATAGATTATAGGTCCAGATTTCATAGTATGAATTACAATACTCTTGAAGCCAATATTGTATCTAGTCTGTATCATCAAATGGATTGGTTCTATATGATACAATTGCTTAGACCATTTGTTTTTTAGGTGACCATTTGGTTTTTTGTTTTTAGTTTTTGAAAATTAACCCTAAATTTCTTCATTTGGTATCTATTTTTTTACTGATGTTTTCAACCAAGTCAAATTTGAAAAATCAAAATAGTCCTTTTCAAGAACTTGTTTTTTGGTTTTGAAATTTGCCTAATAATTCATTTGAATTCATTGGTTTTGAAATAGGCTAATTTTAAGAAAGTAAAAATGAAAAATGTAATGGTCAACAATTGGGGCCTTAGATTTTTGTTGTTAAAATGTATACTTGTTTCCTACTAATTTCCATAATTTCCTTTTTCTTTCCAAAAATTAGTAGAAGGTAGCTAACCAAATTATAAACTTTTAGGGTAGCAGTGTGTATCGGCTTAATTTTCAAAAAACAACAAACAAAATCAAAATATTATCAAATTGAGTCTTAAAAATTCAAGTACTAAGAGTCAAAATCAGATCTAAGTTTACTTTTGTTACATAACATCTTTATCTTAACCACCGCCCATTTGCACCCCACGGGGAGGTAAGCTGATTAGCATAACTTTTTGAATTCTGTTTGGATCCTTATTGATAAGAGAAATCAGCGTTTTAGTCCTTTAATGATGAAAAGTAACTGTTAGTCAAGCTTGCTTTCTGTTGGCTGAAATGTTGGACTAAAACTCCGTTGGCTAAGGTTCATTCCCTGGAAATTAGTTGAAGGGTCAGCAATCAGAGGACAAAAAAAGGAAGCGATCTTGCACGACAATTCATTAAATTAAGTCTAAAGAAGCATAAAGCCACGCTGTTCTCTAATTGTTTAACATTATTTTGCTGCCTTTCTTGCACACAGGGAAGGAAGCTGGATTCAACTTTTGATTACTTCTTCCCGTTTGATTTTGAAACAAGAAACGCCGTACCCCAAGAAATGGATGACAGGTAAGACAATCAGA

mRNA sequence

ATGGAGTTAAATTACTATTTTAATCGAAATCGAGAAAGTTGGGGAACAATCGTGTTGTTGGTGCTGCAATATGGGTACTCTAGAACTAGGCTTGCTTTATTATCCTTAGCATGCCGGATCATGTCCGCCATGGAAGCTACACAAACGAACTTCGTGACCTTTATCTTCTTGCAGTGTCCCATATCTGGTGGATGTTTCCCGGCATCTCGTCAAGGGAGTCTAATTCTTCTTTGCGATCGAGGAACATCCACTGGAAGGAAGCTGGATTCAACTTTTGATTACTTCTTCCCGTTTGATTTTGAAACAAGAAACGCCGTACCCCAAGAAATGGATGACAGGTAAGACAATCAGA

Coding sequence (CDS)

ATGGAGTTAAATTACTATTTTAATCGAAATCGAGAAAGTTGGGGAACAATCGTGTTGTTGGTGCTGCAATATGGGTACTCTAGAACTAGGCTTGCTTTATTATCCTTAGCATGCCGGATCATGTCCGCCATGGAAGCTACACAAACGAACTTCGTGACCTTTATCTTCTTGCAGTGTCCCATATCTGGTGGATGTTTCCCGGCATCTCGTCAAGGGAGTCTAATTCTTCTTTGCGATCGAGGAACATCCACTGGAAGGAAGCTGGATTCAACTTTTGATTACTTCTTCCCGTTTGATTTTGAAACAAGAAACGCCGTACCCCAAGAAATGGATGACAGGTAA

Protein sequence

MELNYYFNRNRESWGTIVLLVLQYGYSRTRLALLSLACRIMSAMEATQTNFVTFIFLQCPISGGCFPASRQGSLILLCDRGTSTGRKLDSTFDYFFPFDFETRNAVPQEMDDR
Homology
[Close]
BLAST of CsGy6G016950 vs. NCBI nr
Match: KGN47428.1 (hypothetical protein Csa_6G319740 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 2.9e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MELNYYFNRNRESWGTIVLLVLQYGYSRTRLALLSLACRIMSAMEATQTNFVTFIFLQCP 60
          MELNYYFNRNRESWGTIVLLVLQYGYSRTRLALLSLACRIMSAMEATQTNFVTFIFLQCP
Sbjct: 1  MELNYYFNRNRESWGTIVLLVLQYGYSRTRLALLSLACRIMSAMEATQTNFVTFIFLQCP 60

Query: 61 ISGGCFPASRQGSLIL 77
          ISGGCFPASRQGSLIL
Sbjct: 61 ISGGCFPASRQGSLIL 76

[Close]
BLAST of CsGy6G016950 vs. TrEMBL
Match: tr|A0A0A0KD32|A0A0A0KD32_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G319740 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.9e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MELNYYFNRNRESWGTIVLLVLQYGYSRTRLALLSLACRIMSAMEATQTNFVTFIFLQCP 60
          MELNYYFNRNRESWGTIVLLVLQYGYSRTRLALLSLACRIMSAMEATQTNFVTFIFLQCP
Sbjct: 1  MELNYYFNRNRESWGTIVLLVLQYGYSRTRLALLSLACRIMSAMEATQTNFVTFIFLQCP 60

Query: 61 ISGGCFPASRQGSLIL 77
          ISGGCFPASRQGSLIL
Sbjct: 61 ISGGCFPASRQGSLIL 76

The following BLAST results are available for this feature:
BLAST of CsGy6G016950 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47428.12.9e-34100.00hypothetical protein Csa_6G319740 [Cucumis sativus][more]
BLAST of CsGy6G016950 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G016950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G016950 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KD32|A0A0A0KD32_CUCSA1.9e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G319740 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G016950.1CsGy6G016950.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G016950Csa6G319740Cucumber (Chinese Long) v2cgybcuB281
CsGy6G016950CSPI06G17520Wild cucumber (PI 183967)cgybcpiB287
CsGy6G016950CmoCh17G003260Cucurbita moschata (Rifu)cgybcmoB743
CsGy6G016950Lsi09G014440Bottle gourd (USVL1VR-Ls)cgyblsiB367
CsGy6G016950MELO3C035188.2Melon (DHL92) v3.6.1cgybmedB384
CsGy6G016950CsaV3_6G023880Cucumber (Chinese Long) v3cgybcucB298
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G016950Cucumber (Gy14) v2cgybcgybB109
CsGy6G016950Cucurbita maxima (Rimu)cgybcmaB734
CsGy6G016950Cucurbita maxima (Rimu)cgybcmaB762
CsGy6G016950Cucurbita maxima (Rimu)cgybcmaB858
CsGy6G016950Cucurbita maxima (Rimu)cgybcmaB872
CsGy6G016950Cucurbita moschata (Rifu)cgybcmoB714
CsGy6G016950Cucurbita moschata (Rifu)cgybcmoB855
CsGy6G016950Cucurbita pepo (Zucchini)cgybcpeB731
CsGy6G016950Cucurbita pepo (Zucchini)cgybcpeB784
CsGy6G016950Cucurbita pepo (Zucchini)cgybcpeB828
CsGy6G016950Cucurbita pepo (Zucchini)cgybcpeB887
CsGy6G016950Cucumber (Chinese Long) v2cgybcuB263
CsGy6G016950Bottle gourd (USVL1VR-Ls)cgyblsiB431
CsGy6G016950Melon (DHL92) v3.5.1cgybmeB382
CsGy6G016950Melon (DHL92) v3.5.1cgybmeB438
CsGy6G016950Melon (DHL92) v3.6.1cgybmedB432
CsGy6G016950Watermelon (Charleston Gray)cgybwcgB436
CsGy6G016950Watermelon (Charleston Gray)cgybwcgB439
CsGy6G016950Watermelon (97103) v1cgybwmB464
CsGy6G016950Watermelon (97103) v1cgybwmB502
CsGy6G016950Wild cucumber (PI 183967)cgybcpiB270
CsGy6G016950Silver-seed gourdcarcgybB0079
CsGy6G016950Silver-seed gourdcarcgybB0295
CsGy6G016950Silver-seed gourdcarcgybB0701
CsGy6G016950Cucumber (Chinese Long) v3cgybcucB276
CsGy6G016950Cucumber (Chinese Long) v3cgybcucB290
CsGy6G016950Cucumber (Chinese Long) v3cgybcucB301
CsGy6G016950Watermelon (97103) v2cgybwmbB442
CsGy6G016950Watermelon (97103) v2cgybwmbB447
CsGy6G016950Wax gourdcgybwgoB512
CsGy6G016950Wax gourdcgybwgoB533