CsGy6G016320 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGGTGATGCTCTTTGTAATAGTAATCAGAATAAGACGAAGGCTCATGAGTGTTCTATTTGTGGTGTTGAGTTTCCCGTTGGGCAAGCGCTTGGTGGCCATATGCGACGCCATCGGAATTCTTCTCCTCCGTCTCAGGCGATGATCATGACGGCTCAGCCGGTCTCCGATGAATCCGATAGTGATTGCGGTGTTGGTGGAGGTGTTGATTTGGATTTGAATCTCACCCCCTTGGAGAATGATCTGGTTCGCTTGCAGTTGATGGCTCCCCCAGTCGGTTGCTTCACATAA ATGTCCGGTGATGCTCTTTGTAATAGTAATCAGAATAAGACGAAGGCTCATGAGTGTTCTATTTGTGGTGTTGAGTTTCCCGTTGGGCAAGCGCTTGGTGGCCATATGCGACGCCATCGGAATTCTTCTCCTCCGTCTCAGGCGATGATCATGACGGCTCAGCCGGTCTCCGATGAATCCGATAGTGATTGCGGTGTTGGTGGAGGTGTTGATTTGGATTTGAATCTCACCCCCTTGGAGAATGATCTGGTTCGCTTGCAGTTGATGGCTCCCCCAGTCGGTTGCTTCACATAA ATGTCCGGTGATGCTCTTTGTAATAGTAATCAGAATAAGACGAAGGCTCATGAGTGTTCTATTTGTGGTGTTGAGTTTCCCGTTGGGCAAGCGCTTGGTGGCCATATGCGACGCCATCGGAATTCTTCTCCTCCGTCTCAGGCGATGATCATGACGGCTCAGCCGGTCTCCGATGAATCCGATAGTGATTGCGGTGTTGGTGGAGGTGTTGATTTGGATTTGAATCTCACCCCCTTGGAGAATGATCTGGTTCGCTTGCAGTTGATGGCTCCCCCAGTCGGTTGCTTCACATAA MSGDALCNSNQNKTKAHECSICGVEFPVGQALGGHMRRHRNSSPPSQAMIMTAQPVSDESDSDCGVGGGVDLDLNLTPLENDLVRLQLMAPPVGCFT
BLAST of CsGy6G016320 vs. NCBI nr
Match: XP_004148235.1 (PREDICTED: zinc finger protein ZAT11 [Cucumis sativus] >KGN47359.1 hypothetical protein Csa_6G303740 [Cucumis sativus]) HSP 1 Score: 136.7 bits (343), Expect = 4.1e-29 Identity = 70/97 (72.16%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of CsGy6G016320 vs. NCBI nr
Match: XP_007206686.1 (zinc finger protein ZAT11 [Prunus persica] >ONI03293.1 hypothetical protein PRUPE_6G249300 [Prunus persica]) HSP 1 Score: 83.2 bits (204), Expect = 5.4e-13 Identity = 49/100 (49.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of CsGy6G016320 vs. NCBI nr
Match: XP_008241560.1 (PREDICTED: zinc finger protein ZAT11 [Prunus mume]) HSP 1 Score: 82.8 bits (203), Expect = 7.0e-13 Identity = 49/100 (49.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of CsGy6G016320 vs. NCBI nr
Match: XP_022947499.1 (zinc finger protein ZAT11-like [Cucurbita moschata]) HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12 Identity = 54/143 (37.76%), Postives = 64/143 (44.76%), Query Frame = 0
BLAST of CsGy6G016320 vs. NCBI nr
Match: XP_022986956.1 (zinc finger protein ZAT12-like [Cucurbita maxima]) HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12 Identity = 52/123 (42.28%), Postives = 54/123 (43.90%), Query Frame = 0
BLAST of CsGy6G016320 vs. TAIR10
Match: AT2G28200.1 (C2H2-type zinc finger family protein) HSP 1 Score: 63.9 bits (154), Expect = 6.1e-11 Identity = 40/96 (41.67%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of CsGy6G016320 vs. TAIR10
Match: AT5G04390.1 (C2H2-type zinc finger family protein) HSP 1 Score: 54.7 bits (130), Expect = 3.7e-08 Identity = 22/31 (70.97%), Postives = 24/31 (77.42%), Query Frame = 0
BLAST of CsGy6G016320 vs. TAIR10
Match: AT3G10470.1 (C2H2-type zinc finger family protein) HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07 Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = 0
BLAST of CsGy6G016320 vs. TAIR10
Match: AT5G03510.1 (C2H2-type zinc finger family protein) HSP 1 Score: 50.8 bits (120), Expect = 5.4e-07 Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 0
BLAST of CsGy6G016320 vs. TAIR10
Match: AT1G49900.1 (C2H2 type zinc finger transcription factor family) HSP 1 Score: 45.1 bits (105), Expect = 2.9e-05 Identity = 18/25 (72.00%), Postives = 19/25 (76.00%), Query Frame = 0
BLAST of CsGy6G016320 vs. Swiss-Prot
Match: sp|Q681X4|ZAT5_ARATH (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09 Identity = 40/96 (41.67%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of CsGy6G016320 vs. Swiss-Prot
Match: sp|Q42430|ZFP1_WHEAT (Zinc finger protein 1 OS=Triticum aestivum OX=4565 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.1e-04 Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 0
BLAST of CsGy6G016320 vs. TrEMBL
Match: tr|A0A0A0KEU7|A0A0A0KEU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303740 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-29 Identity = 70/97 (72.16%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of CsGy6G016320 vs. TrEMBL
Match: tr|M5WM45|M5WM45_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G249300 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.6e-13 Identity = 49/100 (49.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of CsGy6G016320 vs. TrEMBL
Match: tr|A0A199UCC6|A0A199UCC6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S002300 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.3e-12 Identity = 51/89 (57.30%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of CsGy6G016320 vs. TrEMBL
Match: tr|A0A2C9VKE5|A0A2C9VKE5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G111900 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.3e-12 Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 0
BLAST of CsGy6G016320 vs. TrEMBL
Match: tr|B9T431|B9T431_RICCO (Zinc finger protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0294100 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 6.7e-12 Identity = 50/103 (48.54%), Postives = 59/103 (57.28%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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