CsGy6G015190 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATTTTTTTTCTCTGCTACATTAGACGATCGTAGTGGCAACGGCCGCCGGACACAGCCGGACCTTGCGGTGGTGGCCATGGGTAATCCGCCGTTGTCTCCACCACTTTTCTCTCCTTCTTCCTTCTTCACTATTCCTCCTGGTATCAGCCCCACCCAATTACTTGATTCCCCTCTTCTTCTCAACTCTTCTCGTGTAAGTTTTTCCCTTCCTTTTCGTTTTTATTCTCAAATTGGAGATTTCAAATATTTTTTTGCATCCATCTTCAAACTTTTAACCTATATCAGTTCAACTCTGTGTTCATGTCACAGAGTCTATATATATATATGCTAATAAATTAATTTGATGCAACCAAAATCTGTGTCTATGCTTTGAATATGTGCATACGTTGGATACATTAACTAAGCTATTAGGTAAACACAATTTGTAGTATGCTTTATTTGAAGTACTCTTGATTTTCTATCTTTTGAAATTGTTTGGAATATGAATTTTAAAAAATATAACTGTATCATCATCTATTAATTGGAAAGAAGGTATTATTACTTTCACGTTAAGTTATGTTTAGGATAGCAAAGCTTTGTATTTGGTAAACACATATGCATGGAGCTTGAACCTTCAAATACAAAATGGTTAGATAATTAGAGAAAGAAAATTGTAATTAAACTTTTTATTCTTTGTTTTAAAACACTATTATTCATCTTTCTCAAATTCTTTTTATTCTTTTTGACAATATTGAGAAGAAAGGAGATGGAAGTTCTAAATTTGATGTGGATGATATAATATTGATTCGTGTTAAATCATAATATATTACAACTATTTAAAGGGTAAAAAAGAAAAAATAGGGTAGACTTGGTCCAATTAATTATTGAACAAGAAAAATTGACTTTTATTTTAATTTTCTTTTCATCCCCATCTTCATCTTTTGTTTCATTATTGGCATTATAACATCATTTGATATATATATATATATAAAGTAAATGTGTTGAGATATATTATTTGCAGATTCTGCTATCGCCGTCCACCGGAGATTTGAGAAAATCAGCAAGTAACTGTTCCGGCCACCACCAACAGAATGTCAAACAAGAACACAACAACATTACTAAATTCTCATTTCCTCCTAATCACACCACAAAATCATCATCATCATCATCAATCTTTCAATCCTCTTCAACAGTACGTTAA ATGGAATTTTTTTTCTCTGCTACATTAGACGATCGTAGTGGCAACGGCCGCCGGACACAGCCGGACCTTGCGGTGGTGGCCATGGGTAATCCGCCGTTGTCTCCACCACTTTTCTCTCCTTCTTCCTTCTTCACTATTCCTCCTGGTATCAGCCCCACCCAATTACTTGATTCCCCTCTTCTTCTCAACTCTTCTCGTATTCTGCTATCGCCGTCCACCGGAGATTTGAGAAAATCAGCAAGTAACTGTTCCGGCCACCACCAACAGAATGTCAAACAAGAACACAACAACATTACTAAATTCTCATTTCCTCCTAATCACACCACAAAATCATCATCATCATCATCAATCTTTCAATCCTCTTCAACAGTACGTTAA ATGGAATTTTTTTTCTCTGCTACATTAGACGATCGTAGTGGCAACGGCCGCCGGACACAGCCGGACCTTGCGGTGGTGGCCATGGGTAATCCGCCGTTGTCTCCACCACTTTTCTCTCCTTCTTCCTTCTTCACTATTCCTCCTGGTATCAGCCCCACCCAATTACTTGATTCCCCTCTTCTTCTCAACTCTTCTCGTATTCTGCTATCGCCGTCCACCGGAGATTTGAGAAAATCAGCAAGTAACTGTTCCGGCCACCACCAACAGAATGTCAAACAAGAACACAACAACATTACTAAATTCTCATTTCCTCCTAATCACACCACAAAATCATCATCATCATCATCAATCTTTCAATCCTCTTCAACAGTACGTTAA MEFFFSATLDDRSGNGRRTQPDLAVVAMGNPPLSPPLFSPSSFFTIPPGISPTQLLDSPLLLNSSRILLSPSTGDLRKSASNCSGHHQQNVKQEHNNITKFSFPPNHTTKSSSSSSIFQSSSTVR
BLAST of CsGy6G015190 vs. NCBI nr
Match: KGN47228.1 (hypothetical protein Csa_6G216960 [Cucumis sativus]) HSP 1 Score: 209.5 bits (532), Expect = 6.4e-51 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CsGy6G015190 vs. NCBI nr
Match: NP_001274406.1 (probable WRKY transcription factor 33-like [Cucumis sativus] >ADU52522.1 WRKY protein [Cucumis sativus]) HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of CsGy6G015190 vs. NCBI nr
Match: XP_008463823.1 (PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor 26, partial [Cucumis melo]) HSP 1 Score: 138.3 bits (347), Expect = 1.8e-29 Identity = 73/101 (72.28%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of CsGy6G015190 vs. NCBI nr
Match: XP_023007167.1 (WRKY transcription factor WRKY24-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of CsGy6G015190 vs. NCBI nr
Match: XP_023007168.1 (WRKY transcription factor WRKY24-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19 Identity = 59/117 (50.43%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of CsGy6G015190 vs. TAIR10
Match: AT5G07100.1 (WRKY DNA-binding protein 26) HSP 1 Score: 50.8 bits (120), Expect = 6.9e-07 Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0
BLAST of CsGy6G015190 vs. Swiss-Prot
Match: sp|Q9C5T3|WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana OX=3702 GN=WRKY26 PE=1 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05 Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0
BLAST of CsGy6G015190 vs. Swiss-Prot
Match: sp|Q6B6R4|WRK24_ORYSI (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY24 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.2e-04 Identity = 32/79 (40.51%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of CsGy6G015190 vs. Swiss-Prot
Match: sp|Q6IEQ7|WRK24_ORYSJ (WRKY transcription factor WRKY24 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY24 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.2e-04 Identity = 32/79 (40.51%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of CsGy6G015190 vs. TrEMBL
Match: tr|A0A0A0KCF6|A0A0A0KCF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G216960 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.2e-51 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CsGy6G015190 vs. TrEMBL
Match: tr|E7CEX9|E7CEX9_CUCSA (WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY38 PE=2 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 7.3e-35 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of CsGy6G015190 vs. TrEMBL
Match: tr|A0A1S3CK37|A0A1S3CK37_CUCME (LOW QUALITY PROTEIN: probable WRKY transcription factor 26 OS=Cucumis melo OX=3656 GN=LOC103501873 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29 Identity = 73/101 (72.28%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of CsGy6G015190 vs. TrEMBL
Match: tr|A0A0U1Z9L5|A0A0U1Z9L5_GOSHI (WRKY protein 9 (Fragment) OS=Gossypium hirsutum OX=3635 GN=WRKY9 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.5e-11 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 0
BLAST of CsGy6G015190 vs. TrEMBL
Match: tr|A0A1U8LGD9|A0A1U8LGD9_GOSHI (probable WRKY transcription factor 25 OS=Gossypium hirsutum OX=3635 GN=LOC107927127 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.5e-11 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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