CsGy6G014750 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G014750
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	E3 ubiquitin-protein ligase Topors
Location	Chr6 : 12913241 .. 12916563 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGTTATACTGACCATTTGAGCTCGCCCAAAATTCATTTGAAAGTAGGCCCCAATTCGGCCCAATACTTATTTGTAAGGAGTGATTTGGGCCTTGAAAGTTTGTGTTGTCTCCTACTCTTCCACAGAACGCTGAAGGCGGAAGTCATGAAGCGTTCGAGTTCGACCCGAGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCATAACAAAGGTAATTTCGCCGGCGATTTGTGGAGAAACCTGCCCAATTTGCCTCAGAGAATTGGAGGATCGTACCGCCGCCGTGCTTACAACGTGTATCCATGCCTATTGCATAAGCTGTATTCGCAAATGGAGCAATTTGAAGCGAACTTGCCCTCTTTGTAACGCTCAATTCGATTCATGGTTTACCAAAATCAACCTCTCATCGCAAAGCTTCCGCAAAGAACGGTTGACAACCTCGAATTGTTCCGATAAGCTCAAGGTTGGAGTTGGATCTTCCCAGATAGACGCTCGCGGGTGTGTGTTTTCTGGTTTTGATACATCTTTTTGGTAGTTGATTTTGTTTGCAACTGTACCTTTTCTACTTGAATTGAAGTTAGAAGTAAATATGGAACGTTGTTTTCTTGAGAGCTTCTCTAGTTTGTTGTAATGGAGGAATGGATTTGAACATTGAACTGGGAACTATATTTGCTCCTTTTGCTTTCATGTAGGATTCTTCAGAGCACGAGGTATGAATTAAATAGAGAAAGACGGTCGGAAAGATCACTTACATGGCGGCGATCGTTTGGACGGCGAGGGCCGGATTCTTTGCCTGCTGATGTTGTTGTCCGGCGAAAACGTCAGTGGCGAGCTAGGTAACTTCAAGGTTTTATTTCTTGGTTGGGTTTTACACCTCACTTTTTTCTCCATGTTTTAGAGTTAGAGCTTGAATGTTTTTGCTAATATTTTGTTGGGTTTTGACAAAGCATATACAACCGATGTATACAAGCTGTTCCATCTTCGGTCAGATCATGTTTAGAACTGGTATGTATTTTAATACTCAACCAATTGAACCATACTCAAGTTGTCAACATTAGTTTAAATTTCTCTCTTTGATTCCATAAAAAGATGTTGCAAAGTTCTCTTGGCTGCAAATGCAATTCTGTTATTTAGTTCTTCATATGCTGTGTTTGTGATTGCGAATTTGCGAGCTGTGCAGAACATATTAGGAAGTCGTGGAGGCAAAGAAGTGATTCTAGAGAGGATTAAACCATGGATTCAAAGAGAGTTACAGGTCATCCTCGAGGACCCTGATCCAACTATAATTGTTCATCTGGTTATCTCACTATTTGTGGCGAGAATTGAAGCTACTTCCTCACAGCTTAATGCGGAAGATGACTTTCTTTCACCTTTGCGTCCCTTCCTCTTTGAAAAGACTGATTTATTTTGGCATGAGCTAAGGTACATGACTCATTAATTGTTCAATAATTTAAATCCTCGTGGTTGGTTTCCTTGATGCATCTAAATTTTGAAATGGGTGTAAGATTTCTTGAGCATCCAAGTTAAAAGCTCTACTAAATTTTCAATATTACTCAACTATCATTGGTTGACCTAATGGTAAAAGGGAGACATAGTCTCAATATCTAATTAAGAGGTCCTGGGTTCAATCTACAGTGGTCACCTACCTAGGTACATGCAAGTAACCTAAACCCTCACAGATATCAAAAAGAAAAAAGGAAAAAGCTACTAAAGAAGAGAGTACAAAAGAATTGCCAAGCATTTCGACTTTGAGGCCATCTGAGTGAATTGATGTCTAAACAACTAAATCACTGCTGCCTTCACCCCAAAAGAAAATACGGTGGTTACATATATAAGAAATTAAAATCCCATGAGTTTCTTTAACATCAAAGGAACCCTTTTTTTATCCTAATGGTATTCCGAACATAGTCCTTGCTACTTCACTCTATGCGTTTGTGTTTGTTTTTGTTTCTTCATCACAATGCTTGGCTGAAATTTTGTTGGAACCCCTTTCTTTAGTGGAGCTTTTATGGACTGGGTATTTTTGTATGCCCTTGTATTTTTCATTTTTCTCAAAGCAGTTGTTTTTATGTACCCCTGCTACCAGGCTGCAATTTTTGTGTTCATTATTTTTCTGCTACCATTTTTATTTGAAAAAACTTTCTTTTTCAGATGTTTTGCAGGAAGTCCATTGCGGATGGAAGAGTATGACTCAGTGGTTGAATATAGAACAGTGGGTTAATTGAAGAGAAGAATCTGTTTGAAGAAAATATGTTGTACTCGTTACTTCTCCCTTGTTGGTTGCTGGTTATTCTTTAAATGAAAATTGACATTAATATTAAGGAAAGATTTAGCTAGAAAGGGAGGAGAGTTGTGGCTTGGATTCAAGTTCCTTCTTACCCCTGAATGAAAGAACCATTATATGAGACTAAGAAATCTCTGTGCTGCCAAGGATTTTAAAGAGATATGCAGTTTGGATATGCTAGTTTGATCCAACCCATGCGTCGCTTCACGTTGATAACTAAGTAGCATCTTCCTTCGATTTGAAGATCATCTCAAGAAGAGAAAACTCTGTACGGGGAAATATTATGTATTGGTTTCACTCCGTCCATGGAAAGGTATTCCTAACAACAAATTGATTAGAGTTGTTGCTCGATGAGGTCGGTGTTATTGCTCTCTCAGGGTCATCTTTTTCGAGCATGAACTTGAAGAAAGAAACATGAAGACAGAGTTTCGAACCCACATAAGGTTCTGAAGATGGTCTCTGGTTTGAAGGTAGCAATACGATGGATCATTACGGTGGAAGTTGAACACAGTTGGAAGGATTGGAAATGGGATCTTCGTAGAATATTAAGCAATCTTCCTTGTGTGGCACTTAGAGAACATGTTGTAACGAGCGGAAAAGACAAATGTATGTATGCATGTAGTAAGAACCAAGAACTTACTCCCACCCCAAACTTCTACGAAAAGCATGTTGTAATAACTTTCTTGAATTATTAGATGAAAAAAACGACAGCATTTAAATAATTAGAATGTTATTTGATTATTTCATGCATATATCCTTATCAATTGAGCTTCTGTTAAGGTCGTGCTATGTGAAAATTTTCAATTTGTTTTTTTCTTATTCAAAATCTTCGCACAAACAAAAGATGGCTAATCTTGCTTTTCGTTCTTCGCTCTCTAGCTTTCCTTCTCTCAATCGCTCTCATTTGTCTTGTTTCTCATGCTCTTCGATGTCCATCTTCTACAATGTTGATGAATTGCTGAAGAAGAAAAGAACAGAAAAAAAAAAAAAAAAAAGAAATTGAGTGCTTGTCGGAGTATGAGAAGAAGAAGAAG

mRNA sequence

ATGAGCAGTTATACTGACCATTTGAGCTCGCCCAAAATTCATTTGAAAGTAGGCCCCAATTCGGCCCAATACTTATTTGTAAGGAGTGATTTGGGCCTTGAAAGTTTGTGTTGTCTCCTACTCTTCCACAGAACGCTGAAGGCGGAAGTCATGAAGCGTTCGAGTTCGACCCGAGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCATAACAAAGGTAATTTCGCCGGCGATTTGTGGAGAAACCTGCCCAATTTGCCTCAGAGAATTGGAGGATCGTACCGCCGCCGTGCTTACAACGTGTATCCATGCCTATTGCATAAGCTGTATTCGCAAATGGAGCAATTTGAAGCGAACTTGCCCTCTTTGTAACGCTCAATTCGATTCATGGTTTACCAAAATCAACCTCTCATCGCAAAGCTTCCGCAAAGAACGGTTGACAACCTCGAATTGTTCCGATAAGCTCAAGGTTGGAGTTGGATCTTCCCAGATAGACGCTCGCGGGATTCTTCAGAGCACGAGGTATGAATTAAATAGAGAAAGACGGTCGGAAAGATCACTTACATGGCGGCGATCGTTTGGACGGCGAGGGCCGGATTCTTTGCCTGCTGATGTTGTTGTCCGGCGAAAACGTCAGTGGCGAGCTAGCATATACAACCGATGTATACAAGCTGTTCCATCTTCGGTCAGATCATGTTTAGAACTGAACATATTAGGAAGTCGTGGAGGCAAAGAAGTGATTCTAGAGAGGATTAAACCATGGATTCAAAGAGAGTTACAGGTCATCCTCGAGGACCCTGATCCAACTATAATTGTTCATCTGGTTATCTCACTATTTGTGGCGAGAATTGAAGCTACTTCCTCACAGCTTAATGCGGAAGATGACTTTCTTTCACCTTTGCGTCCCTTCCTCTTTGAAAAGACTGATTTATTTTGGCATGAGCTAAGATGTTTTGCAGGAAGTCCATTGCGGATGGAAGAGTATGACTCAGTGGTTGAATATAGAACAGTGGGTTAATTGAAGAGAAGAATCTGTTTGAAGAAAATATGTTGTACTCGTTACTTCTCCCTTGTTGGTTGCTGGTTATTCTTTAAATGAAAATTGACATTAATATTAAGGAAAGATTTAGCTAGAAAGGGAGGAGAGTTGTGGCTTGGATTCAAGTTCCTTCTTACCCCTGAATGAAAGAACCATTATATGAGACTAAGAAATCTCTGTGCTGCCAAGGATTTTAAAGAGATATGCAGTTTGGATATGCTAGTTTGATCCAACCCATGCGTCGCTTCACGTTGATAACTAAGTAGCATCTTCCTTCGATTTGAAGATCATCTCAAGAAGAGAAAACTCTGTACGGGGAAATATTATGTATTGGTTTCACTCCGTCCATGGAAAGGTATTCCTAACAACAAATTGATTAGAGTTGTTGCTCGATGAGGTCGGTGTTATTGCTCTCTCAGGGTCATCTTTTTCGAGCATGAACTTGAAGAAAGAAACATGAAGACAGAGTTTCGAACCCACATAAGGTTCTGAAGATGGTCTCTGGTTTGAAGGTAGCAATACGATGGATCATTACGGTGGAAGTTGAACACAGTTGGAAGGATTGGAAATGGGATCTTCGTAGAATATTAAGCAATCTTCCTTGTGTGGCACTTAGAGAACATGTTGTAACGAGCGGAAAAGACAAATGTATGTATGCATGTAGTAAGAACCAAGAACTTACTCCCACCCCAAACTTCTACGAAAAGCATGTTGTAATAACTTTCTTGAATTATTAGATGAAAAAAACGACAGCATTTAAATAATTAGAATGTTATTTGATTATTTCATGCATATATCCTTATCAATTGAGCTTCTGTTAAGGTCGTGCTATGTGAAAATTTTCAATTTGTTTTTTTCTTATTCAAAATCTTCGCACAAACAAAAGATGGCTAATCTTGCTTTTCGTTCTTCGCTCTCTAGCTTTCCTTCTCTCAATCGCTCTCATTTGTCTTGTTTCTCATGCTCTTCGATGTCCATCTTCTACAATGTTGATGAATTGCTGAAGAAGAAAAGAACAGAAAAAAAAAAAAAAAAAAGAAATTGAGTGCTTGTCGGAGTATGAGAAGAAGAAGAAG

Coding sequence (CDS)

ATGAGCAGTTATACTGACCATTTGAGCTCGCCCAAAATTCATTTGAAAGTAGGCCCCAATTCGGCCCAATACTTATTTGTAAGGAGTGATTTGGGCCTTGAAAGTTTGTGTTGTCTCCTACTCTTCCACAGAACGCTGAAGGCGGAAGTCATGAAGCGTTCGAGTTCGACCCGAGAACCGGCGCGAAAGCTCAACGGCGAAAACTTCATAACAAAGGTAATTTCGCCGGCGATTTGTGGAGAAACCTGCCCAATTTGCCTCAGAGAATTGGAGGATCGTACCGCCGCCGTGCTTACAACGTGTATCCATGCCTATTGCATAAGCTGTATTCGCAAATGGAGCAATTTGAAGCGAACTTGCCCTCTTTGTAACGCTCAATTCGATTCATGGTTTACCAAAATCAACCTCTCATCGCAAAGCTTCCGCAAAGAACGGTTGACAACCTCGAATTGTTCCGATAAGCTCAAGGTTGGAGTTGGATCTTCCCAGATAGACGCTCGCGGGATTCTTCAGAGCACGAGGTATGAATTAAATAGAGAAAGACGGTCGGAAAGATCACTTACATGGCGGCGATCGTTTGGACGGCGAGGGCCGGATTCTTTGCCTGCTGATGTTGTTGTCCGGCGAAAACGTCAGTGGCGAGCTAGCATATACAACCGATGTATACAAGCTGTTCCATCTTCGGTCAGATCATGTTTAGAACTGAACATATTAGGAAGTCGTGGAGGCAAAGAAGTGATTCTAGAGAGGATTAAACCATGGATTCAAAGAGAGTTACAGGTCATCCTCGAGGACCCTGATCCAACTATAATTGTTCATCTGGTTATCTCACTATTTGTGGCGAGAATTGAAGCTACTTCCTCACAGCTTAATGCGGAAGATGACTTTCTTTCACCTTTGCGTCCCTTCCTCTTTGAAAAGACTGATTTATTTTGGCATGAGCTAAGATGTTTTGCAGGAAGTCCATTGCGGATGGAAGAGTATGACTCAGTGGTTGAATATAGAACAGTGGGTTAA

Protein sequence

MSSYTDHLSSPKIHLKVGPNSAQYLFVRSDLGLESLCCLLLFHRTLKAEVMKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG

Homology

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BLAST of CsGy6G014750 vs. NCBI nr
Match: KGN47198.1 (hypothetical protein Csa_6G198260 [Cucumis sativus])

HSP 1 Score: 682.9 bits (1761), Expect = 5.4e-193
Identity = 337/338 (99.70%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MSSYTDHLSSPKIHLKVGPNSAQYLFVRSDLGLESLCCLLLFHRTLKAEVMKRSSSTREP 60
           MSSYTDHLSSPKIHLKVGPNSAQYLFVRSDLGLESLCCLLLFHRTLKAEVMKRSSSTREP
Sbjct: 1   MSSYTDHLSSPKIHLKVGPNSAQYLFVRSDLGLESLCCLLLFHRTLKAEVMKRSSSTREP 60

Query: 61  ARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTC 120
           ARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTC
Sbjct: 61  ARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTC 120

Query: 121 PLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQSTRYELNRE 180
           PLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQSTRYELNRE
Sbjct: 121 PLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQSTRYELNRE 180

Query: 181 RRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELNILGS 240
           RRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELN+LGS
Sbjct: 181 RRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELNVLGS 240

Query: 241 RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAEDDFLSPL 300
           RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAEDDFLSPL
Sbjct: 241 RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAEDDFLSPL 300

Query: 301 RPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 339
           RPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG
Sbjct: 301 RPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 338

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BLAST of CsGy6G014750 vs. NCBI nr
Match: XP_004143083.1 (PREDICTED: E3 ubiquitin-protein ligase Topors [Cucumis sativus])

HSP 1 Score: 583.6 bits (1503), Expect = 4.4e-163
Identity = 287/288 (99.65%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 51  MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI 110
           MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI
Sbjct: 1   MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI 60

Query: 111 RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGIL 170
           RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGIL
Sbjct: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGIL 120

Query: 171 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVR 230
           QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVR
Sbjct: 121 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVR 180

Query: 231 SCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQL 290
           SCLELN+LGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQL
Sbjct: 181 SCLELNVLGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQL 240

Query: 291 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 339
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG
Sbjct: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 288

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BLAST of CsGy6G014750 vs. NCBI nr
Match: XP_008458477.1 (PREDICTED: E3 ubiquitin-protein ligase Topors [Cucumis melo])

HSP 1 Score: 567.8 bits (1462), Expect = 2.5e-158
Identity = 279/288 (96.88%), Postives = 283/288 (98.26%), Query Frame = 0


Query: 51  MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI 110
           MK SSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CI
Sbjct: 1   MKPSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60

Query: 111 RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGIL 170
           RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL TSNCS+KLKVGVGSSQ DARGIL
Sbjct: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLKTSNCSEKLKVGVGSSQTDARGIL 120

Query: 171 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVR 230
           QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRK QWRASIYNRCIQAVPSSVR
Sbjct: 121 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKLQWRASIYNRCIQAVPSSVR 180

Query: 231 SCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQL 290
           SCLELNILG+RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVAR+EATSSQL
Sbjct: 181 SCLELNILGNRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQL 240

Query: 291 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 339
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYR+VG
Sbjct: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRSVG 288

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BLAST of CsGy6G014750 vs. NCBI nr
Match: XP_022999966.1 (E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita maxima])

HSP 1 Score: 477.2 bits (1227), Expect = 4.5e-131
Identity = 233/292 (79.79%), Postives = 257/292 (88.01%), Query Frame = 0


Query: 46  LKAEVMKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAY 105
           L+ ++MK   ST EPARKLNGENF+ KVISPAICG+TCPICLRELEDRTAAVLTTCIHAY
Sbjct: 2   LEGKIMKH--STGEPARKLNGENFVVKVISPAICGQTCPICLRELEDRTAAVLTTCIHAY 61

Query: 106 CISCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQID 165
           C+ CIRKWSNLKRTCPLCNAQFDSWF KINLSS+SFRKERL   NC+D LK+G+GSS+ D
Sbjct: 62  CVGCIRKWSNLKRTCPLCNAQFDSWFCKINLSSRSFRKERLPNLNCADNLKIGIGSSRTD 121

Query: 166 ARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAV 225
           AR ILQSTR EL+R+RRSER LTWRRSFGRRGP+S+P DV+  RK Q    IY+R IQAV
Sbjct: 122 ARRILQSTRNELSRDRRSERPLTWRRSFGRRGPESVPTDVIAWRKLQXXXXIYDRRIQAV 181

Query: 226 PSSVRSCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEA 285
           PSSVRSCL +N+ GS G KE ILERIKPWIQREL+ IL DPDPTIIVHLV SLFVAR+EA
Sbjct: 182 PSSVRSCLVMNLTGSHGVKEAILERIKPWIQRELEAILGDPDPTIIVHLVTSLFVARLEA 241

Query: 286 TSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 338
            SSQLNAE+DFLSPLRPFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Sbjct: 242 PSSQLNAENDFLSPLRPFLYEKTDLFWHELRCFAGSSLRMEEYDSVVEYRTM 291

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BLAST of CsGy6G014750 vs. NCBI nr
Match: XP_022930345.1 (E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita moschata] >XP_022930347.1 E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita moschata])

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 229/282 (81.21%), Postives = 250/282 (88.65%), Query Frame = 0


Query: 56  STREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSN 115
           ST EPARKLNGENF+ KVISPAICGETCPICLRELEDR AAVLTTCIHAYC+ CIRKWSN
Sbjct: 10  STPEPARKLNGENFVVKVISPAICGETCPICLRELEDRIAAVLTTCIHAYCVGCIRKWSN 69

Query: 116 LKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQSTRY 175
           LKRTCPLCNAQFDSWF+KI LSS+SFRKERL   NC+D LK+G+GSS+ DAR ILQSTR 
Sbjct: 70  LKRTCPLCNAQFDSWFSKIKLSSRSFRKERLPNLNCADNLKIGIGSSRTDARRILQSTRN 129

Query: 176 ELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLEL 235
           EL+R+RRSER LTWRRSFGRRGP+S+P DV+  RK Q    IY+R IQAVPSSVRSCL +
Sbjct: 130 ELSRDRRSERPLTWRRSFGRRGPESVPTDVIAWRKLQXXXXIYDRRIQAVPSSVRSCLVM 189

Query: 236 NILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAEDD 295
           N+ GS G KE ILERIKPWIQREL+ IL DPDPTIIVHLV SLFVAR+EA SSQLNAE+D
Sbjct: 190 NLTGSHGVKEAILERIKPWIQRELEAILGDPDPTIIVHLVTSLFVARLEAPSSQLNAEND 249

Query: 296 FLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 338
           FLSPLRPFL+EKTDLFWHELRCFAGS LRMEEYDSVVEYRT+
Sbjct: 250 FLSPLRPFLYEKTDLFWHELRCFAGSSLRMEEYDSVVEYRTM 291

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BLAST of CsGy6G014750 vs. TAIR10
Match: AT2G39100.1 (RING/U-box superfamily protein)

HSP 1 Score: 244.6 bits (623), Expect = 8.8e-65
Identity = 133/289 (46.02%), Postives = 181/289 (62.63%), Query Frame = 0


Query: 55  SSTREPARKLNGENFITKVISPAICGETCPICLREL-EDRTAAVLTTCIHAYCISCIRKW 114
           SS+R      +   F  + I PA+ G++CPICL  L E R+AAV+T C H YC++CIRKW
Sbjct: 11  SSSRHLRSPESIAKFAGRAIFPALQGKSCPICLENLTERRSAAVITVCKHGYCLACIRKW 70

Query: 115 SNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQST 174
           S+ KR CPLCN +FDSWF   + +S+ + KE+L      + L     ++  D R I+Q +
Sbjct: 71  SSFKRNCPLCNTRFDSWFIVSDFASRKYHKEQLPILRDRETLTYH-RNNPSDRRRIIQRS 130

Query: 175 RYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCL 234
           R  L       R L WRRSFGR  P S+P  V+ +RK QWRASIY + ++AV    R  L
Sbjct: 131 RDVLENSSSRSRPLPWRRSFGR--PGSVPDSVIFQRKLQWRASIYTKQLRAVRLHSRR-L 190

Query: 235 ELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAE 294
           EL++  +   K  I ERI+PWI+RELQ +L DPDP++IVH   +LF+ R+E  +++   +
Sbjct: 191 ELSLAVNDYTKAKITERIEPWIRRELQAVLGDPDPSVIVHFASALFIKRLERENNRQTGQ 250

Query: 295 -----DDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTV 338
                +D +S LR FL +K D+FWHELRCFA S L ME YD+VVEY  V
Sbjct: 251 TGMLVEDEVSSLRKFLSDKVDIFWHELRCFAESILTMETYDAVVEYNEV 295

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BLAST of CsGy6G014750 vs. TAIR10
Match: AT5G12310.1 (RING/U-box superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 3.2e-06
Identity = 21/51 (41.18%), Postives = 30/51 (58.82%), Query Frame = 0


Query: 80  GETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKR--TCPLCNAQFD 129
           G  C ICL  +  +  A++  C HAYC++CI +W++ K   TCP C   FD
Sbjct: 40  GGCCAICLDTIPLQETAMVKGCEHAYCVTCILRWASYKEKPTCPQCKLPFD 90

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BLAST of CsGy6G014750 vs. TAIR10
Match: AT2G35420.1 (RING/U-box superfamily protein)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 0


Query: 80  GETCPICLRELEDR-TAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQFD 129
           G  C ICL E  D  T  ++T C H +  +CI  W  L +TCP+C  + D
Sbjct: 100 GTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCELD 149

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BLAST of CsGy6G014750 vs. TAIR10
Match: AT1G72220.1 (RING/U-box superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 2.1e-05
Identity = 21/44 (47.73%), Postives = 26/44 (59.09%), Query Frame = 0


Query: 83  CPICLREL-EDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNA 126
           CP+CL E  ED +  +L  C HA+ ISCI  W +    CPLC A
Sbjct: 177 CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRA 220

[Close]

BLAST of CsGy6G014750 vs. TAIR10
Match: AT1G35330.1 (RING/U-box superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 2.7e-05
Identity = 21/47 (44.68%), Postives = 27/47 (57.45%), Query Frame = 0


Query: 80  GETCPICLRELED-RTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNA 126
           G  C ICL E ED  T  ++  C HA+  SCI  W + + TCP+C A
Sbjct: 125 GVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRA 171

[Close]

BLAST of CsGy6G014750 vs. Swiss-Prot
Match: sp|Q9NS56|TOPRS_HUMAN (E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07
Identity = 76/293 (25.94%), Postives = 108/293 (36.86%), Query Frame = 0


Query: 83  CPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFR 142
           CPICL   ++   + L  C+H +C  C+++WS  K           S F  +  +   F+
Sbjct: 103 CPICLDRFDN--VSYLDRCLHKFCFRCVQEWSKNKAEXXXXXXXXXSIFHSVR-AEDDFK 162

Query: 143 KERLTTSNCSDKLKVGVGSSQIDARGILQSTRYELNRERR----------SERSLTWRRS 202
           +  L  S          GS     R     T   L RER           + R+ T   S
Sbjct: 163 EYVLRPSY--------NGSFVTPDRRFRYRT--TLTRERNASVYSPSGPVNRRTTTPPDS 222

Query: 203 ---FGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELNILGSR-------- 262
              F   G  + P DV +   +  R     R   A   S+R   E +I+  R        
Sbjct: 223 GVLFEGLGISTRPRDVEI--PQFMRQIAVRRPTTADERSLRKIQEQDIINFRRTLYRAGA 282

Query: 263 -------GGK------------EVILERIKPWIQRELQVILEDPDPTI-IVHLVISLFVA 322
                  GG+               L R+ PW++REL V+       + IV  +I   V 
Sbjct: 283 RVRNIEDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQHIIMSNVT 342

Query: 323 RIEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY 335
           R +  S        F+S LRPFL  +T+ F HE   FA SP  M  +D    Y
Sbjct: 343 RYDLESQA------FVSDLRPFLLNRTEHFIHEFISFARSPFNMAAFDQHANY 374

[Close]

BLAST of CsGy6G014750 vs. Swiss-Prot
Match: sp|Q80Z37|TOPRS_MOUSE (E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.2e-07
Identity = 67/287 (23.34%), Postives = 107/287 (37.28%), Query Frame = 0


Query: 83  CPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQFDSWFTKI-------- 142
           CPICL   ++   + L  C+H +C  C+++WS  K           S F  +        
Sbjct: 104 CPICLDRFDN--VSYLDRCLHKFCFRCVQEWSKNKAEXXXXXXXXXSIFHSVRAEDDFKE 163

Query: 143 ---------NLSSQSFRKERLTTSNCSDK-LKVGVGSSQIDAR-------GILQSTRYEL 202
                    + ++   R+ R  T+   ++   +   SS +  R       G+L      +
Sbjct: 164 YVLRPSYNGSFTNPEVRRFRYRTTMTRERSASLYSPSSTVSRRTTTPPDSGVL-FEGLGI 223

Query: 203 NRERRSERSLTWRRSFGRRGPDSL---------PADVVVRRKRQWRASIYNRCIQAVPSS 262
           +   R      + R    RGP +            D++  R+  +RA +  R I+     
Sbjct: 224 STRPRDVDIPQFMRQMALRGPTTTDERSLRKIQEQDIINFRRTLYRAGVRVRSIEDGGRY 283

Query: 263 VRSCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTI-IVHLVISLFVARIEATS 322
                E             L R+ PW++REL V+       + IV  +I   V R +  S
Sbjct: 284 RDISAEF-----FRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLES 343

Query: 323 SQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY 335
                   F+S LRPFL  +T+ F HE   FA SP  M  +D    Y
Sbjct: 344 QA------FVSDLRPFLLNRTEHFIHEFISFARSPFNMAAFDQHANY 376

[Close]

BLAST of CsGy6G014750 vs. Swiss-Prot
Match: sp|P08393|ICP0_HHV11 (E3 ubiquitin-protein ligase ICP0 OS=Human herpesvirus 1 (strain 17) OX=10299 GN=ICP0 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.2e-05
Identity = 18/47 (38.30%), Postives = 27/47 (57.45%), Query Frame = 0


Query: 80  GETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQ 127
           G+ C +C  E+          C+H +CI C++ W  L+ TCPLCNA+
Sbjct: 113 GDVCAVCTDEIAPHLRCDTFPCMHRFCIPCMKTWMQLRNTCPLCNAK 159

[Close]

BLAST of CsGy6G014750 vs. Swiss-Prot
Match: sp|P28284|ICP0_HHV2H (E3 ubiquitin-protein ligase ICP0 OS=Human herpesvirus 2 (strain HG52) OX=10315 GN=RL2 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 17/45 (37.78%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 80  GETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCN 125
           G+ C +C  E+          C+H +CI C++ W  L+ TCPLCN
Sbjct: 123 GDVCAVCTDEIAPPLRCQSFPCLHPFCIPCMKTWIPLRNTCPLCN 167

[Close]

BLAST of CsGy6G014750 vs. Swiss-Prot
Match: sp|Q6NKR1|ATL28_ARATH (RING-H2 finger protein ATL28 OS=Arabidopsis thaliana OX=3702 GN=ATL28 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.2e-04
Identity = 20/50 (40.00%), Postives = 27/50 (54.00%), Query Frame = 0


Query: 80  GETCPICLRELEDR-TAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQFD 129
           G  C ICL E  D  T  ++T C H +  +CI  W  L +TCP+C  + D
Sbjct: 100 GTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCELD 149

[Close]

BLAST of CsGy6G014750 vs. TrEMBL
Match: tr|A0A0A0KCD1|A0A0A0KCD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G198260 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 3.5e-193
Identity = 337/338 (99.70%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MSSYTDHLSSPKIHLKVGPNSAQYLFVRSDLGLESLCCLLLFHRTLKAEVMKRSSSTREP 60
           MSSYTDHLSSPKIHLKVGPNSAQYLFVRSDLGLESLCCLLLFHRTLKAEVMKRSSSTREP
Sbjct: 1   MSSYTDHLSSPKIHLKVGPNSAQYLFVRSDLGLESLCCLLLFHRTLKAEVMKRSSSTREP 60

Query: 61  ARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTC 120
           ARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTC
Sbjct: 61  ARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTC 120

Query: 121 PLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQSTRYELNRE 180
           PLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQSTRYELNRE
Sbjct: 121 PLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGILQSTRYELNRE 180

Query: 181 RRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELNILGS 240
           RRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELN+LGS
Sbjct: 181 RRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELNVLGS 240

Query: 241 RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAEDDFLSPL 300
           RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAEDDFLSPL
Sbjct: 241 RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQLNAEDDFLSPL 300

Query: 301 RPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 339
           RPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG
Sbjct: 301 RPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 338

[Close]

BLAST of CsGy6G014750 vs. TrEMBL
Match: tr|A0A1S3C7X8|A0A1S3C7X8_CUCME (E3 ubiquitin-protein ligase Topors OS=Cucumis melo OX=3656 GN=LOC103497872 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 1.7e-158
Identity = 279/288 (96.88%), Postives = 283/288 (98.26%), Query Frame = 0


Query: 51  MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI 110
           MK SSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCI CI
Sbjct: 1   MKPSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCIGCI 60

Query: 111 RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDARGIL 170
           RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERL TSNCS+KLKVGVGSSQ DARGIL
Sbjct: 61  RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLKTSNCSEKLKVGVGSSQTDARGIL 120

Query: 171 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVR 230
           QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRK QWRASIYNRCIQAVPSSVR
Sbjct: 121 QSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKLQWRASIYNRCIQAVPSSVR 180

Query: 231 SCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIEATSSQL 290
           SCLELNILG+RGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVAR+EATSSQL
Sbjct: 181 SCLELNILGNRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARLEATSSQL 240

Query: 291 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 339
           NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYR+VG
Sbjct: 241 NAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRSVG 288

[Close]

BLAST of CsGy6G014750 vs. TrEMBL
Match: tr|A0A2I4G9Q4|A0A2I4G9Q4_9ROSI (E3 ubiquitin-protein ligase Topors OS=Juglans regia OX=51240 GN=LOC109005961 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.8e-79
Identity = 153/274 (55.84%), Postives = 202/274 (73.72%), Query Frame = 0


Query: 67  ENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCIRKWSNLKRTCPLCNAQ 126
           E F+++VI PAI G++CPICL++LE R  AVLT C HAYC+ CIRKWSNL+R CPLCNA 
Sbjct: 4   EKFVSEVIWPAIRGKSCPICLKDLEFRGVAVLTVCTHAYCVECIRKWSNLRRRCPLCNAD 63

Query: 127 FDSWFTKINLSSQSFRKERLTT-SNCSDKLKVGVG-SSQIDARGILQSTRYELNRERRSE 186
           FDSWF KINLSS++F KERL+  +N +  + V V  S +ID+R I++ TR EL    R  
Sbjct: 64  FDSWFCKINLSSRTFCKERLSALNNRTRNVDVEVELSRRIDSRRIVRRTRDELYTVSRRT 123

Query: 187 RSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVPSSVRSCLELNILGSRGGK 246
           R L W+RSFGR  P S+P DV+  RK QWRAS+Y   ++A+P S R+C+E N LG+   +
Sbjct: 124 RPLPWQRSFGR--PGSVPPDVIAERKLQWRASMYGLGLRAIPLSPRNCIEQNFLGNIVAR 183

Query: 247 EVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARIE----ATSSQLNAEDDFLSPL 306
           + I++RI+PWI RELQ IL DPDP++IVH+  SLF+A +E    A S QL+ ED+ ++PL
Sbjct: 184 QKIIQRIEPWIWRELQAILGDPDPSVIVHVATSLFIASLEKKNNANSEQLDGEDNLMAPL 243

Query: 307 RPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY 335
           RPFL ++T++F HELRCFA S L +E YD+VVEY
Sbjct: 244 RPFLQDRTNMFLHELRCFAESSLNVEAYDAVVEY 275

[Close]

BLAST of CsGy6G014750 vs. TrEMBL
Match: tr|A0A2P4I714|A0A2P4I714_QUESU (E3 ubiquitin-protein ligase topors OS=Quercus suber OX=58331 GN=CFP56_36951 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.9e-78
Identity = 159/299 (53.18%), Postives = 202/299 (67.56%), Query Frame = 0


Query: 51  MKRSSSTREPARKLNGENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYCISCI 110
           M+ SSS+R      N E  + KVI PAI G +CPICL++LE R AAVLT C HAYC+ CI
Sbjct: 1   MESSSSSRS-----NREKMVKKVIWPAIRGRSCPICLKDLEAREAAVLTDCKHAYCVRCI 60

Query: 111 RKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSN-------CSDKLKVGVGSSQ 170
           RKWS LKR CPLCNA FDSWF  I+LSS++F K+RL+  N        ++ ++VG   + 
Sbjct: 61  RKWSGLKRNCPLCNAHFDSWFCDISLSSRTFYKKRLSALNNNIADNTRNNDVRVGFRRTG 120

Query: 171 IDARGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQ 230
              R  ++  R ELN      RSL WRRSFGR  P S+P DV+  RK QWRASIY+R ++
Sbjct: 121 HRHRRSIRRIRNELNSLSWQPRSLPWRRSFGR--PGSVPPDVIAERKLQWRASIYSRRLR 180

Query: 231 AVPSSVRSCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVARI 290
           AV S  ++C E NI G+ G KE I++RI PWI+RELQ IL DPDP++IVH+  SLF+A +
Sbjct: 181 AVSSPSQNCREQNISGNIGAKERIMQRIGPWIRRELQAILGDPDPSVIVHVAFSLFIASL 240

Query: 291 E----ATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYRTVG 339
           E      S QLN ED+ ++PL  FL ++T +FWHELRCFA S L ME YD+VVEY  +G
Sbjct: 241 ENNINVHSEQLNVEDESIAPLHRFLDDRTSMFWHELRCFAESSLNMETYDAVVEYEQLG 292

[Close]

BLAST of CsGy6G014750 vs. TrEMBL
Match: tr|A0A1R3JUC1|A0A1R3JUC1_9ROSI (Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_13909 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.9e-76
Identity = 152/293 (51.88%), Postives = 200/293 (68.26%), Query Frame = 0


Query: 51  MKRSSSTREPARKLNG----ENFITKVISPAICGETCPICLRELEDRTAAVLTTCIHAYC 110
           M+ SSST     KL+G    E FI +VISPAI G+TCPICL  L+ R AAVL+ C HAYC
Sbjct: 1   MESSSST-----KLSGSSKTEKFIKRVISPAIIGQTCPICLTNLDPRVAAVLSVCFHAYC 60

Query: 111 ISCIRKWSNLKRTCPLCNAQFDSWFTKINLSSQSFRKERLTTSNCSDKLKVGVGSSQIDA 170
           + CI+KWS+LKR CPLC++ FDSWF KIN+SS  F K +LT       +   + S+  D 
Sbjct: 61  LDCIKKWSDLKRKCPLCSSTFDSWFYKINISSGKFVKHQLTALPEDKPIVPRLQSTFTDH 120

Query: 171 RGILQSTRYELNRERRSERSLTWRRSFGRRGPDSLPADVVVRRKRQWRASIYNRCIQAVP 230
           R ++Q TR ELN      R L WRRSFGR  P ++P+ V+  RK QWRAS+YNR ++A+P
Sbjct: 121 RRLIQRTREELNSINSRRRPLPWRRSFGR--PGTVPSHVMAERKLQWRASVYNRRLKALP 180

Query: 231 SSVRSCLELNILGSRGGKEVILERIKPWIQRELQVILEDPDPTIIVHLVISLFVA----R 290
           SS     + N+  +   K+ IL+RI+PWI+REL+ IL DPD +II+H+V SLF +    +
Sbjct: 181 SSQGISFQQNVPRNESEKQRILQRIEPWIRRELEAILGDPDTSIILHVVSSLFFSSHGGK 240

Query: 291 IEATSSQLNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEYR 336
            + +S Q+  ED+FL+PL+PFL E TD+FWHELRCFA S   +E YD+VVEYR
Sbjct: 241 YDGSSGQVGVEDNFLAPLKPFLHEWTDMFWHELRCFAESSFTIETYDAVVEYR 286

The following BLAST results are available for this feature:

BLAST of CsGy6G014750 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47198.1	5.4e-193	99.70	hypothetical protein Csa_6G198260 [Cucumis sativus]	[more]
XP_004143083.1	4.4e-163	99.65	PREDICTED: E3 ubiquitin-protein ligase Topors [Cucumis sativus]	[more]
XP_008458477.1	2.5e-158	96.88	PREDICTED: E3 ubiquitin-protein ligase Topors [Cucumis melo]	[more]
XP_022999966.1	4.5e-131	79.79	E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita maxima]	[more]
XP_022930345.1	1.1e-129	81.21	E3 ubiquitin-protein ligase Topors isoform X1 [Cucurbita moschata] >XP_022930347...	[more]

BLAST of CsGy6G014750 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39100.1	8.8e-65	46.02	RING/U-box superfamily protein	[more]
AT5G12310.1	3.2e-06	41.18	RING/U-box superfamily protein	[more]
AT2G35420.1	1.2e-05	40.00	RING/U-box superfamily protein	[more]
AT1G72220.1	2.1e-05	47.73	RING/U-box superfamily protein	[more]
AT1G35330.1	2.7e-05	44.68	RING/U-box superfamily protein	[more]

BLAST of CsGy6G014750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9NS56\|TOPRS_HUMAN	1.6e-07	25.94	E3 ubiquitin-protein ligase Topors OS=Homo sapiens OX=9606 GN=TOPORS PE=1 SV=1	[more]
sp\|Q80Z37\|TOPRS_MOUSE	6.2e-07	23.34	E3 ubiquitin-protein ligase Topors OS=Mus musculus OX=10090 GN=Topors PE=1 SV=1	[more]
sp\|P08393\|ICP0_HHV11	1.2e-05	38.30	E3 ubiquitin-protein ligase ICP0 OS=Human herpesvirus 1 (strain 17) OX=10299 GN=...	[more]
sp\|P28284\|ICP0_HHV2H	1.3e-04	37.78	E3 ubiquitin-protein ligase ICP0 OS=Human herpesvirus 2 (strain HG52) OX=10315 G...	[more]
sp\|Q6NKR1\|ATL28_ARATH	2.2e-04	40.00	RING-H2 finger protein ATL28 OS=Arabidopsis thaliana OX=3702 GN=ATL28 PE=2 SV=1	[more]

BLAST of CsGy6G014750 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KCD1\|A0A0A0KCD1_CUCSA	3.5e-193	99.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G198260 PE=4 SV=1	[more]
tr\|A0A1S3C7X8\|A0A1S3C7X8_CUCME	1.7e-158	96.88	E3 ubiquitin-protein ligase Topors OS=Cucumis melo OX=3656 GN=LOC103497872 PE=4 ...	[more]
tr\|A0A2I4G9Q4\|A0A2I4G9Q4_9ROSI	5.8e-79	55.84	E3 ubiquitin-protein ligase Topors OS=Juglans regia OX=51240 GN=LOC109005961 PE=...	[more]
tr\|A0A2P4I714\|A0A2P4I714_QUESU	2.9e-78	53.18	E3 ubiquitin-protein ligase topors OS=Quercus suber OX=58331 GN=CFP56_36951 PE=4...	[more]
tr\|A0A1R3JUC1\|A0A1R3JUC1_9ROSI	7.9e-76	51.88	Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_13909 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017907	Znf_RING_CS
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G014750.1	CsGy6G014750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 83..123 e-value: 3.9E-7 score: 39.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 82..124 e-value: 4.1E-9 score: 36.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 83..124 score: 13.168
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 80..171 e-value: 1.5E-13 score: 53.0
None	No IPR available	PANTHER	PTHR22937	RING FINGER CONTAINING PROTEIN	coord: 74..335
None	No IPR available	PANTHER	PTHR22937:SF95	C3HC4 TYPE ZINC FINGER DOMAIN PROTEIN	coord: 74..335
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 77..130
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 101..110

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G014750	Cla009321	Watermelon (97103) v1	cgybwmB506
CsGy6G014750	Csa6G198260	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G014750	MELO3C021348	Melon (DHL92) v3.5.1	cgybmeB386
CsGy6G014750	ClCG06G005300	Watermelon (Charleston Gray)	cgybwcgB440
CsGy6G014750	CSPI06G14870	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G014750	CmaCh08G012130	Cucurbita maxima (Rimu)	cgybcmaB875
CsGy6G014750	CmoCh08G011860	Cucurbita moschata (Rifu)	cgybcmoB857
CsGy6G014750	Lsi09G014100	Bottle gourd (USVL1VR-Ls)	cgyblsiB368
CsGy6G014750	Cp4.1LG17g00880	Cucurbita pepo (Zucchini)	cgybcpeB787
CsGy6G014750	MELO3C021348.2	Melon (DHL92) v3.6.1	cgybmedB387
CsGy6G014750	Cla97C06G114800	Watermelon (97103) v2	cgybwmbB448
CsGy6G014750	Bhi12G001851	Wax gourd	cgybwgoB514
CsGy6G014750	Carg15964	Silver-seed gourd	carcgybB0337

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G014750	Silver-seed gourd	carcgybB0081
CsGy6G014750	Cucumber (Chinese Long) v3	cgybcucB279
CsGy6G014750	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G014750	Watermelon (97103) v2	cgybwmbB445
CsGy6G014750	Wax gourd	cgybwgoB534
CsGy6G014750	Cucumber (Gy14) v2	cgybcgybB111
CsGy6G014750	Cucurbita maxima (Rimu)	cgybcmaB733
CsGy6G014750	Cucurbita maxima (Rimu)	cgybcmaB765
CsGy6G014750	Cucurbita maxima (Rimu)	cgybcmaB857
CsGy6G014750	Cucurbita moschata (Rifu)	cgybcmoB747
CsGy6G014750	Cucurbita moschata (Rifu)	cgybcmoB840
CsGy6G014750	Cucurbita pepo (Zucchini)	cgybcpeB734
CsGy6G014750	Cucurbita pepo (Zucchini)	cgybcpeB833
CsGy6G014750	Cucurbita pepo (Zucchini)	cgybcpeB885
CsGy6G014750	Cucumber (Chinese Long) v2	cgybcuB268
CsGy6G014750	Bottle gourd (USVL1VR-Ls)	cgyblsiB433
CsGy6G014750	Melon (DHL92) v3.6.1	cgybmedB436
CsGy6G014750	Watermelon (97103) v1	cgybwmB466