CsGy6G012620 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G012620
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ABSCISIC ACID-INSENSITIVE 5-like protein 1
Location	Chr6 : 10935326 .. 10935894 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTTGAACAAGATATTCAAACCCAATTCAGAGCTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCATAAAGATGATCAACAAAACCCACATCCCCAAGATTATTCCATTGATGTTCACCAAGATTCTTGCCAAAGTCCACATGCTTTTGGGGAAATGAATTCGGAAGCTTCTTCTTCTTCTTCTTCTTCTTGTTCAGTGAAACAACAGCTATGTTCTGGGAATGCCAACAGATCAATGGTGGATTTGAGAGAAATTGTGCTGTCTCTTCGTCTTGTCAAGAGAATAATGATGCTGCAAGTTTCGGAAATATGTCCGGGAATTGCTTTTCAAATTATCAAATGCTCACCCATTCTGCTGGGGAACCTAGTGATAACAATTCAAATGATGAGAAATGTGAAGCGCTTGAAGACTGATTGGGTTGAGCCTAAGAACAAGAAGAGGATCGTTGATATGGTTCTACTGAAGTAGAAGTTGTGTTGCAGCGGAAGACAGCGCAGGATGATAAAAATCGTGAGTTGTCTGCTGCTCTATCTTGGCCACGAAAACATGCCTAA

mRNA sequence

ATGAATGTTGAACAAGATATTCAAACCCAATTCAGAGCTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCATAAAGATGATCAACAAAACCCACATCCCCAAGATTATTCCATTGATGTTCACCAAGATTCTTGCCAAAGTCCACATGCTTTTGGGGAAATGAATTCGGAAGCTTCTTCTTCTTCTTCTTCTTCTTGTTCAGTGAAACAACAGCTATGTTCTGGGAATGCCAACAGATCAATGGTGGATTTGAGAGAAATTGTGCTGTCTCTTCGTCTTGTCAAGAGAATAATGATGCTGCAAGTTTCGGAAATATGTCCGGGAATTGCTTTTCAAATTATCAAATGCTCACCCATTCTGCTGGGGAACCTAGTGATAACAATTCAAATGATGAGAAATGTGAAGCGCTTGAAGACTGATTGGGTTGAGCCTAAGAACAAGAAGAGGATCGTTGATATGCGGAAGACAGCGCAGGATGATAAAAATCGTGAGTTGTCTGCTGCTCTATCTTGGCCACGAAAACATGCCTAA

Coding sequence (CDS)

ATGAATGTTGAACAAGATATTCAAACCCAATTCAGAGCTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCATAAAGATGATCAACAAAACCCACATCCCCAAGATTATTCCATTGATGTTCACCAAGATTCTTGCCAAAGTCCACATGCTTTTGGGGAAATGAATTCGGAAGCTTCTTCTTCTTCTTCTTCTTCTTGTTCAGTGAAACAACAGCTATGTTCTGGGAATGCCAACAGATCAATGGTGGATTTGAGAGAAATTGTGCTGTCTCTTCGTCTTGTCAAGAGAATAATGATGCTGCAAGTTTCGGAAATATGTCCGGGAATTGCTTTTCAAATTATCAAATGCTCACCCATTCTGCTGGGGAACCTAGTGATAACAATTCAAATGATGAGAAATGTGAAGCGCTTGAAGACTGATTGGGTTGAGCCTAAGAACAAGAAGAGGATCGTTGATATGCGGAAGACAGCGCAGGATGATAAAAATCGTGAGTTGTCTGCTGCTCTATCTTGGCCACGAAAACATGCCTAA

Protein sequence

MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSEASSSSSSSCSVKQQLCSGNANRSMVDLREIVLSLRLVKRIMMLQVSEICPGIAFQIIKCSPILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVDMRKTAQDDKNRELSAALSWPRKHA

Homology

[Close]

BLAST of CsGy6G012620 vs. NCBI nr
Match: KGN46954.1 (hypothetical protein Csa_6G152890 [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 9.8e-77
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 60
           MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE
Sbjct: 1   MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 60

Query: 61  ASXXXXXXCSVKQQLCSGNANRSMVDLREIVLSLRLVKRIMMLQVSEICPGIAFQIIKCS 120
           ASXXXXXXCSVKQQLCSGNANRSMVDLREIVLSLRLVKRIMMLQVSEICPGIAFQIIKCS
Sbjct: 61  ASXXXXXXCSVKQQLCSGNANRSMVDLREIVLSLRLVKRIMMLQVSEICPGIAFQIIKCS 120

Query: 121 PILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVDM 157
           PILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVDM
Sbjct: 121 PILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVDM 156

[Close]

BLAST of CsGy6G012620 vs. NCBI nr
Match: KGN46952.1 (hypothetical protein Csa_6G152380 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 2.3e-17
Identity = 85/186 (45.70%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSEA--------- 70
           F  CFKSIDD+WSEI H +DQQNP PQ  SIDVHQ+ CQS HA  EM SE          
Sbjct: 82  FPLCFKSIDDVWSEIGH-NDQQNPLPQ-ASIDVHQNPCQSRHASEEMTSEGLLVKDGVVQ 141

Query: 71  SXXXXXXCSVKQQLCSGNANRSMVDLREIVLSLRLVKR---IMMLQVSEICPGIAFQIIK 130
                   S++QQLCS N NRSMVDLREI LSL   +      ++ +SE C    F   +
Sbjct: 142 EASSSSSDSMEQQLCSVNNNRSMVDLREIGLSLSYEQNNDAAGVINMSENC----FSNDQ 201

Query: 131 CSPILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVD-------MRKTAQDDKNRELSAA 178
            S   +G     I      + L T WVEP NKKRI+D        R   +  KNR+ SAA
Sbjct: 202 MSTQSVGEPCDDIS-NEKCEALMTGWVEPNNKKRIIDGSTEVVLQRIQRRMMKNRK-SAA 259

[Close]

BLAST of CsGy6G012620 vs. NCBI nr
Match: KGN46955.1 (hypothetical protein Csa_6G152900 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 3.0e-17
Identity = 59/101 (58.42%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 1  MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 60
          MN+E+DIQTQFRACFKS DDIWSEIDHK DQQNPHPQ    DVHQD CQS HAFGEM  E
Sbjct: 1  MNLEEDIQTQFRACFKSTDDIWSEIDHK-DQQNPHPQ----DVHQDPCQSRHAFGEMTWE 60

Query: 61 AS-XXXXXXCS---------VKQQLCSGNANRSMVDLREIV 92
           S       CS             LCS N N SM   R ++
Sbjct: 61 DSLVKLAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMI 96

[Close]

BLAST of CsGy6G012620 vs. NCBI nr
Match: KGN46953.1 (hypothetical protein Csa_6G152390 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-11
Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 61
           F  CFKSIDDIWSEIDHK DQQNPHPQ +SIDVHQ+ CQS HA GEM SE
Sbjct: 79  FPLCFKSIDDIWSEIDHK-DQQNPHPQ-HSIDVHQNPCQSRHASGEMTSE 126

[Close]

BLAST of CsGy6G012620 vs. NCBI nr
Match: XP_016902297.1 (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 78.6 bits (192), Expect = 2.4e-11
Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 61
           F  CFKSIDDIWSEIDHK DQQNPHPQ +SIDV Q+ CQS HAFGEM SE
Sbjct: 71  FPLCFKSIDDIWSEIDHK-DQQNPHPQ-HSIDVQQNPCQSRHAFGEMTSE 118

[Close]

BLAST of CsGy6G012620 vs. TrEMBL
Match: tr|A0A0A0KDP3|A0A0A0KDP3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152890 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.5e-77
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 60
           MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE
Sbjct: 1   MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 60

Query: 61  ASXXXXXXCSVKQQLCSGNANRSMVDLREIVLSLRLVKRIMMLQVSEICPGIAFQIIKCS 120
           ASXXXXXXCSVKQQLCSGNANRSMVDLREIVLSLRLVKRIMMLQVSEICPGIAFQIIKCS
Sbjct: 61  ASXXXXXXCSVKQQLCSGNANRSMVDLREIVLSLRLVKRIMMLQVSEICPGIAFQIIKCS 120

Query: 121 PILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVDM 157
           PILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVDM
Sbjct: 121 PILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVDM 156

[Close]

BLAST of CsGy6G012620 vs. TrEMBL
Match: tr|A0A0A0KEX6|A0A0A0KEX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152380 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.5e-17
Identity = 85/186 (45.70%), Postives = 100/186 (53.76%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSEA--------- 70
           F  CFKSIDD+WSEI H +DQQNP PQ  SIDVHQ+ CQS HA  EM SE          
Sbjct: 82  FPLCFKSIDDVWSEIGH-NDQQNPLPQ-ASIDVHQNPCQSRHASEEMTSEGLLVKDGVVQ 141

Query: 71  SXXXXXXCSVKQQLCSGNANRSMVDLREIVLSLRLVKR---IMMLQVSEICPGIAFQIIK 130
                   S++QQLCS N NRSMVDLREI LSL   +      ++ +SE C    F   +
Sbjct: 142 EASSSSSDSMEQQLCSVNNNRSMVDLREIGLSLSYEQNNDAAGVINMSENC----FSNDQ 201

Query: 131 CSPILLGNLVITIQMMRNVKRLKTDWVEPKNKKRIVD-------MRKTAQDDKNRELSAA 178
            S   +G     I      + L T WVEP NKKRI+D        R   +  KNR+ SAA
Sbjct: 202 MSTQSVGEPCDDIS-NEKCEALMTGWVEPNNKKRIIDGSTEVVLQRIQRRMMKNRK-SAA 259

[Close]

BLAST of CsGy6G012620 vs. TrEMBL
Match: tr|A0A0A0KB58|A0A0A0KB58_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152900 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-17
Identity = 59/101 (58.42%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 1  MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 60
          MN+E+DIQTQFRACFKS DDIWSEIDHK DQQNPHPQ    DVHQD CQS HAFGEM  E
Sbjct: 1  MNLEEDIQTQFRACFKSTDDIWSEIDHK-DQQNPHPQ----DVHQDPCQSRHAFGEMTWE 60

Query: 61 AS-XXXXXXCS---------VKQQLCSGNANRSMVDLREIV 92
           S       CS             LCS N N SM   R ++
Sbjct: 61 DSLVKLAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMI 96

[Close]

BLAST of CsGy6G012620 vs. TrEMBL
Match: tr|A0A1S4E244|A0A1S4E244_CUCME (ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC107991613 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11
Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 61
           F  CFKSIDDIWSEIDHK DQQNPHPQ +SIDV Q+ CQS HAFGEM SE
Sbjct: 71  FPLCFKSIDDIWSEIDHK-DQQNPHPQ-HSIDVQQNPCQSRHAFGEMTSE 118

[Close]

BLAST of CsGy6G012620 vs. TrEMBL
Match: tr|A0A0A0KBT4|A0A0A0KBT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152390 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11
Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 61
           F  CFKSIDDIWSEIDHK DQQNPHPQ +SIDVHQ+ CQS HA GEM SE
Sbjct: 79  FPLCFKSIDDIWSEIDHK-DQQNPHPQ-HSIDVHQNPCQSRHASGEMTSE 126

The following BLAST results are available for this feature:

BLAST of CsGy6G012620 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46954.1	9.8e-77	100.00	hypothetical protein Csa_6G152890 [Cucumis sativus]	[more]
KGN46952.1	2.3e-17	45.70	hypothetical protein Csa_6G152380 [Cucumis sativus]	[more]
KGN46955.1	3.0e-17	58.42	hypothetical protein Csa_6G152900 [Cucumis sativus]	[more]
KGN46953.1	2.4e-11	80.00	hypothetical protein Csa_6G152390 [Cucumis sativus]	[more]
XP_016902297.1	2.4e-11	80.00	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 [Cucumis melo]	[more]

BLAST of CsGy6G012620 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy6G012620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy6G012620 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDP3\|A0A0A0KDP3_CUCSA	6.5e-77	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152890 PE=4 SV=1	[more]
tr\|A0A0A0KEX6\|A0A0A0KEX6_CUCSA	1.5e-17	45.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152380 PE=4 SV=1	[more]
tr\|A0A0A0KB58\|A0A0A0KB58_CUCSA	2.0e-17	58.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152900 PE=4 SV=1	[more]
tr\|A0A1S4E244\|A0A1S4E244_CUCME	1.6e-11	80.00	ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0KBT4\|A0A0A0KBT4_CUCSA	1.6e-11	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152390 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012620.1	CsGy6G012620.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G012620	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G012620	Cucumber (Chinese Long) v3	cgybcucB299
CsGy6G012620	Watermelon (97103) v2	cgybwmbB399
CsGy6G012620	Watermelon (97103) v2	cgybwmbB406
CsGy6G012620	Wax gourd	cgybwgoB579
CsGy6G012620	Cucumber (Gy14) v2	cgybcgybB102
CsGy6G012620	Cucurbita maxima (Rimu)	cgybcmaB730
CsGy6G012620	Cucurbita maxima (Rimu)	cgybcmaB802
CsGy6G012620	Cucurbita maxima (Rimu)	cgybcmaB820
CsGy6G012620	Cucurbita maxima (Rimu)	cgybcmaB862
CsGy6G012620	Cucurbita moschata (Rifu)	cgybcmoB715
CsGy6G012620	Cucurbita moschata (Rifu)	cgybcmoB780
CsGy6G012620	Cucurbita moschata (Rifu)	cgybcmoB799
CsGy6G012620	Cucurbita moschata (Rifu)	cgybcmoB844
CsGy6G012620	Cucurbita pepo (Zucchini)	cgybcpeB758
CsGy6G012620	Cucurbita pepo (Zucchini)	cgybcpeB811
CsGy6G012620	Cucurbita pepo (Zucchini)	cgybcpeB827
CsGy6G012620	Cucurbita pepo (Zucchini)	cgybcpeB856
CsGy6G012620	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G012620	Bottle gourd (USVL1VR-Ls)	cgyblsiB377
CsGy6G012620	Bottle gourd (USVL1VR-Ls)	cgyblsiB399
CsGy6G012620	Melon (DHL92) v3.5.1	cgybmeB365
CsGy6G012620	Melon (DHL92) v3.5.1	cgybmeB425
CsGy6G012620	Melon (DHL92) v3.6.1	cgybmedB366
CsGy6G012620	Watermelon (Charleston Gray)	cgybwcgB393
CsGy6G012620	Watermelon (Charleston Gray)	cgybwcgB401
CsGy6G012620	Watermelon (Charleston Gray)	cgybwcgB427
CsGy6G012620	Watermelon (97103) v1	cgybwmB424
CsGy6G012620	Watermelon (97103) v1	cgybwmB473
CsGy6G012620	Watermelon (97103) v1	cgybwmB478
CsGy6G012620	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G012620	Wild cucumber (PI 183967)	cgybcpiB290
CsGy6G012620	Silver-seed gourd	carcgybB0265
CsGy6G012620	Silver-seed gourd	carcgybB0422
CsGy6G012620	Silver-seed gourd	carcgybB0915