CsGy6G010580 (gene) Cucumber (Gy14) v2

NameCsGy6G010580
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionriboflavin synthase
LocationChr6 : 9070842 .. 9071678 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTACTTTTTCTTACCTCTCTACTGCTACATCACTCTCCAATATCCCCAGAATGCTTCCTCCAATGGGGAATCTTCATCTCCCATCCTCCCAATTTTTCCCTAACTTCAGTTTCAATACCAAGACGTCTCTTTTCACTCTATTCACATCCACCCACAAGCCCCAACTGCGTTACAAATCTCGCCCAAGGGCCTCCGTTCAATGTCTTTTCACAGGCATTGTTGAAGAAATTGGCCATGTTAAAAACTTGGGTATTGATGAAAATGGGGGATTCGATTTAGAAATTAATGCAAGAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTCAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAACTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCAATGGATCCTGAAGGGGATTCCTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCGAAGGGATTTATTGCTGTGGATGGGGCTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGACAAATGTGGTCATTCCATTGAAGAAAGTTGGACATTTGGTGAATTTGGAGGTAGATATTCTCGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCAGTCAAACCCATTGAGTCTCCATGA

mRNA sequence

ATGTCTACTTTTTCTTACCTCTCTACTGCTACATCACTCTCCAATATCCCCAGAATGCTTCCTCCAATGGGGAATCTTCATCTCCCATCCTCCCAATTTTTCCCTAACTTCAGTTTCAATACCAAGACGTCTCTTTTCACTCTATTCACATCCACCCACAAGCCCCAACTGCGTTACAAATCTCGCCCAAGGGCCTCCGTTCAATGTCTTTTCACAGGCATTGTTGAAGAAATTGGCCATGTTAAAAACTTGGGTATTGATGAAAATGGGGGATTCGATTTAGAAATTAATGCAAGAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTCAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAACTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCAATGGATCCTGAAGGGGATTCCTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCGAAGGGATTTATTGCTGTGGATGGGGCTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGACAAATGTGGTCATTCCATTGAAGAAAGTTGGACATTTGGTGAATTTGGAGGTAGATATTCTCGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCAGTCAAACCCATTGAGTCTCCATGA

Coding sequence (CDS)

ATGTCTACTTTTTCTTACCTCTCTACTGCTACATCACTCTCCAATATCCCCAGAATGCTTCCTCCAATGGGGAATCTTCATCTCCCATCCTCCCAATTTTTCCCTAACTTCAGTTTCAATACCAAGACGTCTCTTTTCACTCTATTCACATCCACCCACAAGCCCCAACTGCGTTACAAATCTCGCCCAAGGGCCTCCGTTCAATGTCTTTTCACAGGCATTGTTGAAGAAATTGGCCATGTTAAAAACTTGGGTATTGATGAAAATGGGGGATTCGATTTAGAAATTAATGCAAGAACTGTTCTTGAAGGTGTTAACCTTGGAGATAGCATTGCTGTCAATGGAACTTGTCTTACTGTCACTGCTTTTGACCACCAACTATCTGAATTCAAGGTGGGGTTGGCGCCTGAGACGCTCAGGAAGACTTCATTGGTGGAACTCTCGCCTGGTTCACCTGTGAACTTGGAGAGGGCGGTTCAACCAATCAGCCGAATGGGTGGCCATTTTGTGCAGGGGCATGTGGATGGGACTGGGGAGATAATATCAATGGATCCTGAAGGGGATTCCTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTGAATTACATTGTACCGAAGGGATTTATTGCTGTGGATGGGGCTAGCTTGACTGTGGTAGATGTTTTTGATGATGAGAAGGCTTTTAACTTCATGTTGGTTGCTTATACTCAGACAAATGTGGTCATTCCATTGAAGAAAGTTGGACATTTGGTGAATTTGGAGGTAGATATTCTCGGCAAGTATGTGCAAAGACTCCTCAGTAATGGTGCAGTCAAACCCATTGAGTCTCCATGA

Protein sequence

MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQLRYKSRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP
BLAST of CsGy6G010580 vs. NCBI nr
Match: XP_011656951.1 (PREDICTED: riboflavin synthase-like [Cucumis sativus] >XP_011656952.1 PREDICTED: riboflavin synthase-like [Cucumis sativus] >KGN46745.1 hypothetical protein Csa_6G128550 [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 7.4e-148
Identity = 268/278 (96.40%), Postives = 273/278 (98.20%), Query Frame = 0

Query: 1   MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQLRYK 60
           MSTFS LSTATSL NIPRMLPP+G+LHLPSS FFP F+FNTKTSLFTLFTSTHKPQLRYK
Sbjct: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVK+LGI ENGGFDLEINA+TVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 278

BLAST of CsGy6G010580 vs. NCBI nr
Match: XP_008466932.1 (PREDICTED: riboflavin synthase, partial [Cucumis melo])

HSP 1 Score: 481.5 bits (1238), Expect = 1.9e-132
Identity = 240/248 (96.77%), Postives = 244/248 (98.39%), Query Frame = 0

Query: 19  MLPPMGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQLRYKSRPRASVQCLFTGIVEEI 78
           MLPPMGNLHLPSSQFFPNF+FNTKTSLFTLFTSTHKPQL Y+SRPRASVQCLFTGIVEEI
Sbjct: 1   MLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGIVEEI 60

Query: 79  GHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET 138
           GHVKNLGI ENGG+DLEINA+TVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET
Sbjct: 61  GHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET 120

Query: 139 LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE 198
           LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE
Sbjct: 121 LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE 180

Query: 199 ALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHLVNLEVDI 258
           ALLNYIVPKGFIAVDG SLTVVDVFDDEKAFNFMLVAYTQ NVVIPLKKVGHLVNLEVDI
Sbjct: 181 ALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDI 240

Query: 259 LGKYVQRL 267
           LGKYVQRL
Sbjct: 241 LGKYVQRL 248

BLAST of CsGy6G010580 vs. NCBI nr
Match: XP_022986014.1 (riboflavin synthase-like [Cucurbita maxima])

HSP 1 Score: 463.8 bits (1192), Expect = 4.2e-127
Identity = 238/281 (84.70%), Postives = 253/281 (90.04%), Query Frame = 0

Query: 1   MSTFSYLSTATSLSNIPRMLPP----MGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQ 60
           M+TFS LSTA SLSNIP+M+PP    + N+H  SSQF P F  NT  SLFTLFTS  KPQ
Sbjct: 1   MATFSSLSTAISLSNIPKMVPPRRDAILNVHPSSSQFCPRFELNTNRSLFTLFTSCRKPQ 60

Query: 61  LRYKSRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGT 120
           LR K RPR+SVQCLFTGIVEEIGHVK +GI E+GGFDL+I A+TVLEGVNLGDSI+VNGT
Sbjct: 61  LRCKPRPRSSVQCLFTGIVEEIGHVKQVGIAEHGGFDLKITAKTVLEGVNLGDSISVNGT 120

Query: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180
           CLTVTAFDHQLSEFKVGLAPETLRKTSLVEL+ GSPVNLERAVQPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELTAGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 240
           TGEIISMDPEGDSLWIKV+TSEALL YIVPKGFIAVDG SLTVVDVFD+EKAFNFMLVAY
Sbjct: 181 TGEIISMDPEGDSLWIKVRTSEALLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFMLVAY 240

Query: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIES 278
           TQ NVVIPLK VG LVNLEVDILGKYVQRLLSNGA+KPIES
Sbjct: 241 TQKNVVIPLKNVGQLVNLEVDILGKYVQRLLSNGAIKPIES 281

BLAST of CsGy6G010580 vs. NCBI nr
Match: XP_022943374.1 (riboflavin synthase-like [Cucurbita moschata])

HSP 1 Score: 459.9 bits (1182), Expect = 6.1e-126
Identity = 237/282 (84.04%), Postives = 252/282 (89.36%), Query Frame = 0

Query: 1   MSTFSYLSTATSLSNIPRMLPP----MGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQ 60
           M+TFS LSTA SLSNIP+M+PP    + N+   SSQF P F  NT  SLFT FTS  KPQ
Sbjct: 1   MATFSSLSTAISLSNIPKMVPPTRDAILNVRPSSSQFCPKFELNTNRSLFTQFTSCRKPQ 60

Query: 61  LRYKSRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGT 120
           LR K RPR+SVQCLFTGIVEEIGHVK +GI E+GGFDL+I A+TVLEGVNLGDSI+VNGT
Sbjct: 61  LRCKPRPRSSVQCLFTGIVEEIGHVKQVGIAEHGGFDLKITAKTVLEGVNLGDSISVNGT 120

Query: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180
           CLTVTAFDHQLSEFKVGLAPETLRKTSLVEL+ GSPVNLERAVQPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELTAGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 240
           TGEIISMDPE DSLWIKV+TSEALL YIVPKGFIAVDG SLTVVDVFD+EKAFNFMLVAY
Sbjct: 181 TGEIISMDPEEDSLWIKVRTSEALLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFMLVAY 240

Query: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           TQ NVVIPLKKVG LVNLEVDILGKYVQRLLSNGA+KPIESP
Sbjct: 241 TQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIKPIESP 282

BLAST of CsGy6G010580 vs. NCBI nr
Match: XP_023513296.1 (riboflavin synthase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.9 bits (1182), Expect = 6.1e-126
Identity = 237/282 (84.04%), Postives = 252/282 (89.36%), Query Frame = 0

Query: 1   MSTFSYLSTATSLSNIPRMLPP----MGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQ 60
           M+TFS LSTA SLSNIP+M+PP    + N+H  SSQF P F  N   SLFTLFTS  KPQ
Sbjct: 1   MATFSSLSTAISLSNIPKMVPPRRDAILNVHPSSSQFCPRFELNMNRSLFTLFTSCRKPQ 60

Query: 61  LRYKSRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGT 120
           LR K R R+SVQCLFTGIVEEIGHVK +GI E+GGFDL+I A+TVLEGVNLGDSI+VNGT
Sbjct: 61  LRCKPRQRSSVQCLFTGIVEEIGHVKQVGIAEHGGFDLKITAKTVLEGVNLGDSISVNGT 120

Query: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180
           CLTVTAFDHQLSEFKVGLAPETLRKTSLVEL+ GSPVNLERAVQPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELTAGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 240
           TGEIISMDPE DSLWIKV+TSEALL YIVPKGFIAVDG SLTVVDVFD+EKAFNFMLVAY
Sbjct: 181 TGEIISMDPEEDSLWIKVRTSEALLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFMLVAY 240

Query: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           TQ NVVIPLKKVG LVNLEVDILGKYVQRLLSNGA+KPIESP
Sbjct: 241 TQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIKPIESP 282

BLAST of CsGy6G010580 vs. TAIR10
Match: AT2G20690.1 (lumazine-binding family protein)

HSP 1 Score: 309.3 bits (791), Expect = 2.4e-84
Identity = 157/234 (67.09%), Postives = 189/234 (80.77%), Query Frame = 0

Query: 37  FSFNTKTSLFTLFTSTHKPQLRYKSRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEI 96
           F   +K+S  +L TS  + +  ++ R   S++ +FTGIVEE+G VK+LG+ ++GGFDL+I
Sbjct: 32  FDCVSKSSKLSLKTSCGRSRTHHR-RQNLSIRSVFTGIVEEMGEVKDLGMADHGGFDLKI 91

Query: 97  NARTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLE 156
            AR VLE V LGDSIAVNGTCLTVT F+ +  EF VGLAPETLRKTSL EL  GSPVNLE
Sbjct: 92  GARVVLEDVKLGDSIAVNGTCLTVTEFNAE--EFTVGLAPETLRKTSLEELKKGSPVNLE 151

Query: 157 RAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGAS 216
           RA+QP+SRMGGH VQGHVDGTG I SM+ EGDSLW+KVK  + LL YIVPKGF+AVDG S
Sbjct: 152 RALQPVSRMGGHVVQGHVDGTGVIESMEVEGDSLWVKVKADKGLLKYIVPKGFVAVDGTS 211

Query: 217 LTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNG 271
           LTVVDVFD+E  FNFM++AYTQ NVVIP KK+G  VNLEVDI+GKYV+RLL++G
Sbjct: 212 LTVVDVFDEESCFNFMMIAYTQQNVVIPTKKIGQKVNLEVDIMGKYVERLLTSG 262

BLAST of CsGy6G010580 vs. Swiss-Prot
Match: sp|Q9Y7P0|RISA_SCHPO (Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rib5 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.9e-46
Identity = 98/199 (49.25%), Postives = 137/199 (68.84%), Query Frame = 0

Query: 70  LFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTVTAFDHQLSE 129
           +FTG+VE IG VK++    + GF ++I A  +L+  + GDSIAVNGTCLTVT FD     
Sbjct: 1   MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRY--H 60

Query: 130 FKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDS 189
           F VG+APE+LR T+L +   G PVNLERAV   +RMGGHFVQGHVD   EI+    +G++
Sbjct: 61  FTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEA 120

Query: 190 LWIKVKTSEA-LLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKV 249
           +    +  +  +L YIV KG+IA+DG SLT+  V  D+  F+ M+++YTQ+ V++  K V
Sbjct: 121 IDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHV--DDSTFSIMMISYTQSKVIMAKKNV 180

Query: 250 GHLVNLEVDILGKYVQRLL 268
           G LVN+EVD +GKY ++L+
Sbjct: 181 GDLVNVEVDQIGKYTEKLV 195

BLAST of CsGy6G010580 vs. Swiss-Prot
Match: sp|P50854|RISA_ACTPL (Riboflavin synthase OS=Actinobacillus pleuropneumoniae OX=715 GN=ribE PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.5e-46
Identity = 99/210 (47.14%), Postives = 137/210 (65.24%), Query Frame = 0

Query: 70  LFTGIVEEIGHVKNLGIDENGGFD-LEINARTVLEGVNLGDSIAVNGTCLTVTAFDHQLS 129
           +FTGI+EE+G +    I + G F  + INA  VL+ V+LGD+IAVNG CLTVT+F    +
Sbjct: 1   MFTGIIEEVGKIAQ--IHKQGEFAVVTINATKVLQDVHLGDTIAVNGVCLTVTSFSS--N 60

Query: 130 EFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGD 189
           +F   +  ETL++TSL EL   SPVNLERA+    R GGH V GH+DGTGEI  + P  +
Sbjct: 61  QFTADVMSETLKRTSLGELKSNSPVNLERAMAANGRFGGHIVSGHIDGTGEIAEITPAHN 120

Query: 190 SLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKV 249
           S W ++KTS  L+ YI+ KG I +DG SLTVVD   D+++F   ++ +T     +  KK+
Sbjct: 121 STWYRIKTSPKLMRYIIEKGSITIDGISLTVVDT--DDESFRVSIIPHTIKETNLGSKKI 180

Query: 250 GHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           G +VNLE DI+GKY+++ L     KP + P
Sbjct: 181 GSIVNLENDIVGKYIEQFLLK---KPADEP 201

BLAST of CsGy6G010580 vs. Swiss-Prot
Match: sp|A5DB51|RISA_PICGU (Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=RIB5 PE=2 SV=3)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-44
Identity = 98/203 (48.28%), Postives = 131/203 (64.53%), Query Frame = 0

Query: 70  LFTGIVEEIGHV-----KNLGIDENGGFDLEI-NARTVLEGVNLGDSIAVNGTCLTVTAF 129
           +FTG+VE IG V     K+       G  + I +   +LE V LGDSI  NG CLTVT F
Sbjct: 1   MFTGLVEHIGTVLQVTEKDTTASGGDGVSMVIGDCSKILEDVQLGDSICTNGVCLTVTEF 60

Query: 130 DHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISM 189
           D   S+FKVG++PETLR++ L EL PGS VNLERAV+   RMGGH VQGHVD    I++ 
Sbjct: 61  DMARSQFKVGISPETLRRSDLGELKPGSKVNLERAVKADVRMGGHVVQGHVDTIATIVNR 120

Query: 190 DPEGDSLWIKVKTSEALL-NYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVV 249
             +G+++    K  ++    YIV KGFIA+DG SLTV DV  ++  F+  +V+YTQ  V+
Sbjct: 121 RGDGNAINFTFKLRDSQYGKYIVEKGFIAIDGTSLTVTDVDHEQSEFSISMVSYTQEKVI 180

Query: 250 IPLKKVGHLVNLEVDILGKYVQR 266
           +PLK  G  VN+EVD+ GK +++
Sbjct: 181 MPLKNSGDSVNIEVDLTGKLIEK 203

BLAST of CsGy6G010580 vs. Swiss-Prot
Match: sp|P38145|RISA_YEAST (Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RIB5 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.5e-40
Identity = 94/205 (45.85%), Postives = 133/205 (64.88%), Query Frame = 0

Query: 70  LFTGIVEEIGHV-KNLGID--ENGGFDLEI---NARTVLEGVNLGDSIAVNGTCLTVTAF 129
           +FTGIVE +G V +N   D  E+GG  + I   NA ++L   ++GDSIAVNG CLTVT F
Sbjct: 1   MFTGIVECMGTVLENNPYDDSESGGQGVSITIGNAGSILTDCHVGDSIAVNGVCLTVTEF 60

Query: 130 DHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISM 189
           ++    FKVG++PET++++++     G+ VNLERAV    R GGH+VQGHVD    I+S 
Sbjct: 61  NN--DSFKVGISPETIKRSNVASWIQGTQVNLERAVSQDVRFGGHYVQGHVDTVANIVSR 120

Query: 190 DPEGDSLWIKVK-TSEALLNYIVPKGFIAVDGASLTV--VDVFDDEKAFNFMLVAYTQTN 249
            PEG+S+    +   +    YIV KGFI +DG SLT+  VD      AF   ++ +TQ N
Sbjct: 121 RPEGNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLTIIKVDPLSQGGAFYISMIKHTQDN 180

Query: 250 VVIPLKKVGHLVNLEVDILGKYVQR 266
           V++PLKK+G  VN+EVD+ GK +++
Sbjct: 181 VIMPLKKIGDEVNIEVDLTGKIIEK 203

BLAST of CsGy6G010580 vs. Swiss-Prot
Match: sp|P16440|RISA_BACSU (Riboflavin synthase OS=Bacillus subtilis (strain 168) OX=224308 GN=ribE PE=1 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 2.3e-36
Identity = 84/198 (42.42%), Postives = 122/198 (61.62%), Query Frame = 0

Query: 70  LFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTVTAFDHQLSE 129
           +FTGI+EE G ++++         L I    +LE V+LGDSIAVNG CLTVT  D   ++
Sbjct: 1   MFTGIIEETGTIESMK-KAGHAMALTIKCSKILEDVHLGDSIAVNGICLTVT--DFTKNQ 60

Query: 130 FKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDS 189
           F V + PET++ TSL +L+ GS VNLERA+    R GGHFV GHVDGT EI  ++ + ++
Sbjct: 61  FTVDVMPETVKATSLNDLTKGSKVNLERAMAANGRFGGHFVSGHVDGTAEITRIEEKSNA 120

Query: 190 LWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVG 249
           ++  +K   +L   +V KG I VDG SLT+  + +D       L+ +T +  +   K +G
Sbjct: 121 VYYDLKMDPSLTKTLVLKGSITVDGVSLTIFGLTED--TVTISLIPHTISETIFSEKTIG 180

Query: 250 HLVNLEVDILGKYVQRLL 268
             VN+E D++GKY+ R L
Sbjct: 181 SKVNIECDMIGKYMYRFL 193

BLAST of CsGy6G010580 vs. TrEMBL
Match: tr|A0A0A0KAI5|A0A0A0KAI5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128550 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 4.9e-148
Identity = 268/278 (96.40%), Postives = 273/278 (98.20%), Query Frame = 0

Query: 1   MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQLRYK 60
           MSTFS LSTATSL NIPRMLPP+G+LHLPSS FFP F+FNTKTSLFTLFTSTHKPQLRYK
Sbjct: 1   MSTFSSLSTATSLPNIPRMLPPIGSLHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVK+LGI ENGGFDLEINA+TVLEGVNLGDSIAVNGTCLTV
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGTCLTV 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
           TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 278

BLAST of CsGy6G010580 vs. TrEMBL
Match: tr|A0A1S3CSC8|A0A1S3CSC8_CUCME (riboflavin synthase OS=Cucumis melo OX=3656 GN=LOC103504295 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.3e-132
Identity = 240/248 (96.77%), Postives = 244/248 (98.39%), Query Frame = 0

Query: 19  MLPPMGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQLRYKSRPRASVQCLFTGIVEEI 78
           MLPPMGNLHLPSSQFFPNF+FNTKTSLFTLFTSTHKPQL Y+SRPRASVQCLFTGIVEEI
Sbjct: 1   MLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGIVEEI 60

Query: 79  GHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET 138
           GHVKNLGI ENGG+DLEINA+TVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET
Sbjct: 61  GHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPET 120

Query: 139 LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE 198
           LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE
Sbjct: 121 LRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSE 180

Query: 199 ALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHLVNLEVDI 258
           ALLNYIVPKGFIAVDG SLTVVDVFDDEKAFNFMLVAYTQ NVVIPLKKVGHLVNLEVDI
Sbjct: 181 ALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNLEVDI 240

Query: 259 LGKYVQRL 267
           LGKYVQRL
Sbjct: 241 LGKYVQRL 248

BLAST of CsGy6G010580 vs. TrEMBL
Match: tr|A0A0A0KAI2|A0A0A0KAI2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128010 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.9e-124
Identity = 237/278 (85.25%), Postives = 238/278 (85.61%), Query Frame = 0

Query: 1   MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQLRYK 60
           MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNF+FNTKTSLFTLFTSTHKPQLRYK
Sbjct: 1   MSTFSYLSTATSLSNIPRMLPPMGNLHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLRYK 60

Query: 61  SRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTV 120
           SRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINAR                     
Sbjct: 61  SRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINAR--------------------- 120

Query: 121 TAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180
                              RKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI
Sbjct: 121 -------------------RKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEI 180

Query: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 240
           ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN
Sbjct: 181 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTN 238

Query: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP
Sbjct: 241 VVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 238

BLAST of CsGy6G010580 vs. TrEMBL
Match: tr|L0C7R1|L0C7R1_MOMCH (Riboflavin synthase OS=Momordica charantia OX=3673 PE=2 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 4.2e-123
Identity = 233/282 (82.62%), Postives = 249/282 (88.30%), Query Frame = 0

Query: 1   MSTFSYLSTATSLSNIPRMLPPMGNLHL----PSSQFFPNFSFNTKTSLFTLFTSTHKPQ 60
           MSTFS LSTAT+LS IP+M+PP GN  L     S  F   F FNT  SLFTLFTS+ KPQ
Sbjct: 1   MSTFSSLSTATALSQIPKMVPPGGNTILNVRPGSPHFCLKFKFNTNRSLFTLFTSSCKPQ 60

Query: 61  LRYKSRPRASVQCLFTGIVEEIGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGT 120
           LR KSRPR S+QCLFTGIVEE+G VKNLG+ ENGGFDLEI A+TVLEGV+LGDSIAVNGT
Sbjct: 61  LRCKSRPRTSIQCLFTGIVEEMGRVKNLGVTENGGFDLEIVAKTVLEGVHLGDSIAVNGT 120

Query: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180
           CLTVTAFDH+LSEF VGLAPETLRKTSLVEL PGSPVNLERAVQPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHELSEFTVGLAPETLRKTSLVELVPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 240
           TGEIISM+PE DSLWIKV+TSE LL YIVPKGFIAVDG SLTVVDVFD+EKAFNFMLVAY
Sbjct: 181 TGEIISMEPEEDSLWIKVRTSEDLLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFMLVAY 240

Query: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 279
           TQ +VVIPLKKVG LVNLEVDILGKYVQRLLSNGA+ PI+SP
Sbjct: 241 TQNSVVIPLKKVGDLVNLEVDILGKYVQRLLSNGAITPIKSP 282

BLAST of CsGy6G010580 vs. TrEMBL
Match: tr|M5VH27|M5VH27_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G137500 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 5.5e-99
Identity = 187/260 (71.92%), Postives = 212/260 (81.54%), Query Frame = 0

Query: 18  RMLPPMGNLHLPSSQFFPNFSFNTKTSLFTLFTSTHKPQLRYKSRPRASVQCLFTGIVEE 77
           R +  +   H  +S+   NF    K S  TLF ST +P    KS PR +++CLFTGIVEE
Sbjct: 20  RKMSILNKFHSVASRTHCNFDAIFKPSTLTLFISTQRPHAHIKSPPRNTIRCLFTGIVEE 79

Query: 78  IGHVKNLGIDENGGFDLEINARTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGLAPE 137
           +G +K LG  ENGGFD++I A+TVLEGV+LGDSIAVNGTCLTVT FD QLS+F VGL+PE
Sbjct: 80  MGQIKQLGTAENGGFDMKIGAKTVLEGVHLGDSIAVNGTCLTVTEFDTQLSDFTVGLSPE 139

Query: 138 TLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTS 197
           TLRKTSL+EL PGS VNLERAVQP SRMGGHFVQGHVDGTGEI+SMDPEGDSLWIKVK S
Sbjct: 140 TLRKTSLIELEPGSLVNLERAVQPTSRMGGHFVQGHVDGTGEIVSMDPEGDSLWIKVKAS 199

Query: 198 EALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAYTQTNVVIPLKKVGHLVNLEVD 257
           + LL Y+VPKGFIAVDG SLTVVDVFD E +FNFMLVAYTQ NVVIPLKKVG  VNLEVD
Sbjct: 200 KELLKYVVPKGFIAVDGTSLTVVDVFDKEDSFNFMLVAYTQQNVVIPLKKVGQKVNLEVD 259

Query: 258 ILGKYVQRLLSNGAVKPIES 278
           ILGKYV+RLLS+G V+ I+S
Sbjct: 260 ILGKYVERLLSSGFVESIKS 279

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011656951.17.4e-14896.40PREDICTED: riboflavin synthase-like [Cucumis sativus] >XP_011656952.1 PREDICTED:... [more]
XP_008466932.11.9e-13296.77PREDICTED: riboflavin synthase, partial [Cucumis melo][more]
XP_022986014.14.2e-12784.70riboflavin synthase-like [Cucurbita maxima][more]
XP_022943374.16.1e-12684.04riboflavin synthase-like [Cucurbita moschata][more]
XP_023513296.16.1e-12684.04riboflavin synthase-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT2G20690.12.4e-8467.09lumazine-binding family protein[more]
Match NameE-valueIdentityDescription
sp|Q9Y7P0|RISA_SCHPO1.9e-4649.25Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=28... [more]
sp|P50854|RISA_ACTPL5.5e-4647.14Riboflavin synthase OS=Actinobacillus pleuropneumoniae OX=715 GN=ribE PE=3 SV=1[more]
sp|A5DB51|RISA_PICGU1.4e-4448.28Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / D... [more]
sp|P38145|RISA_YEAST4.5e-4045.85Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=... [more]
sp|P16440|RISA_BACSU2.3e-3642.42Riboflavin synthase OS=Bacillus subtilis (strain 168) OX=224308 GN=ribE PE=1 SV=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KAI5|A0A0A0KAI5_CUCSA4.9e-14896.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128550 PE=4 SV=1[more]
tr|A0A1S3CSC8|A0A1S3CSC8_CUCME1.3e-13296.77riboflavin synthase OS=Cucumis melo OX=3656 GN=LOC103504295 PE=4 SV=1[more]
tr|A0A0A0KAI2|A0A0A0KAI2_CUCSA2.9e-12485.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128010 PE=4 SV=1[more]
tr|L0C7R1|L0C7R1_MOMCH4.2e-12382.62Riboflavin synthase OS=Momordica charantia OX=3673 PE=2 SV=1[more]
tr|M5VH27|M5VH27_PRUPE5.5e-9971.92Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G137500 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR017938Riboflavin_synthase-like_b-brl
IPR026017Lumazine-bd_dom
IPR001783Lumazine-bd
IPR023366ATP_synth_asu-like_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G010580.1CsGy6G010580.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyGENE3DG3DSA:2.40.30.20coord: 70..160
e-value: 3.5E-29
score: 102.5
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyGENE3DG3DSA:2.40.30.20coord: 173..274
e-value: 2.4E-31
score: 109.2
IPR001783Lumazine-binding proteinTIGRFAMTIGR00187TIGR00187coord: 70..270
e-value: 2.7E-61
score: 204.3
IPR001783Lumazine-binding proteinPANTHERPTHR21098RIBOFLAVIN SYNTHASE ALPHA CHAINcoord: 65..271
IPR001783Lumazine-binding proteinCDDcd00402Riboflavin_synthase_likecoord: 71..259
e-value: 5.94305E-88
score: 261.553
IPR026017Lumazine-binding domainPFAMPF00677Lum_bindingcoord: 72..158
e-value: 1.5E-21
score: 76.0
coord: 171..257
e-value: 9.4E-20
score: 70.3
IPR026017Lumazine-binding domainPROSITEPS51177LUMAZINE_BINDcoord: 169..267
score: 22.099
IPR026017Lumazine-binding domainPROSITEPS51177LUMAZINE_BINDcoord: 70..168
score: 25.166
NoneNo IPR availablePANTHERPTHR21098:SF0RIBOFLAVIN SYNTHASEcoord: 65..271
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILYSSF63380Riboflavin synthase domain-likecoord: 164..268
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILYSSF63380Riboflavin synthase domain-likecoord: 70..160

The following gene(s) are paralogous to this gene:

None