ClCG02G017630 (gene) Watermelon (Charleston Gray)

NameClCG02G017630
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRiboflavin synthase
LocationCG_Chr02 : 32151653 .. 32152501 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTACTTTTTCTTCTCTCTCTACTGCCACATCACTATCCAATGTCCCCAAAATGATTCCTCCCAGGGGGAATACAGTCCTCAATCTTCATCTCCCATCCTCCCAATTTTGCCCTAACTTCAATTTCAATACCAACAGATCTCTTTTCACTCTATTCACCTCCACCCACAAGCCTCAATTGCGGTGTAAATTTCGGTCGAGGAGCTCCATTCAATGCCTTTTCACTGGCATTGTTGAAGAAATAGGCCATGTTAAACACTTGGGTGTTGCTGAACATGGAGGATTTGATTTGGAGATTACTGCCAAAACTGTTCTTGAAGGTGTAAATCTTGGAGACAGCATTGCTGTCAACGGAACTTGTCTTACTGTGACTGCTTTTGATCACCAACTATCGAAATTCAAGGTGGGGTTAGCGCCTGAGACGCTCAGGAAGACTTCTTTGGTGGAACTCACGCCTGGTTCACCTGTGAATTTGGAGAGGGCGCTTCAACCAATCAGCCGAATGGGTGGGCATTTTGTGCAAGGGCATGTGGATGGGACTGGGGAGATCATCTCAATGGATCCTGAGGGGGATTCGTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTCAATTACATTGTACCAAAAGGATTTATTGCAGTGGATGGAACAAGCTTGACTGTGGTGGATGTTTTTGATGAGGAGAATGCTTTTAACTTCATGTTGGTTGCTTATACTCAGAAAAACGTGGTCATTCCATTGAAGAAAGTTGGGCAGTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGCAATGGTGCCATCGATCCCGTCGAGTCTCCGTGA

mRNA sequence

ATGTCTACTTTTTCTTCTCTCTCTACTGCCACATCACTATCCAATGTCCCCAAAATGATTCCTCCCAGGGGGAATACAGTCCTCAATCTTCATCTCCCATCCTCCCAATTTTGCCCTAACTTCAATTTCAATACCAACAGATCTCTTTTCACTCTATTCACCTCCACCCACAAGCCTCAATTGCGGTGTAAATTTCGGTCGAGGAGCTCCATTCAATGCCTTTTCACTGGCATTGTTGAAGAAATAGGCCATGTTAAACACTTGGGTGTTGCTGAACATGGAGGATTTGATTTGGAGATTACTGCCAAAACTGTTCTTGAAGGTGTAAATCTTGGAGACAGCATTGCTGTCAACGGAACTTGTCTTACTGTGACTGCTTTTGATCACCAACTATCGAAATTCAAGGTGGGGTTAGCGCCTGAGACGCTCAGGAAGACTTCTTTGGTGGAACTCACGCCTGGTTCACCTGTGAATTTGGAGAGGGCGCTTCAACCAATCAGCCGAATGGGTGGGCATTTTGTGCAAGGGCATGTGGATGGGACTGGGGAGATCATCTCAATGGATCCTGAGGGGGATTCGTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTCAATTACATTGTACCAAAAGGATTTATTGCAGTGGATGGAACAAGCTTGACTGTGGTGGATGTTTTTGATGAGGAGAATGCTTTTAACTTCATGTTGGTTGCTTATACTCAGAAAAACGTGGTCATTCCATTGAAGAAAGTTGGGCAGTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGCAATGGTGCCATCGATCCCGTCGAGTCTCCGTGA

Coding sequence (CDS)

ATGTCTACTTTTTCTTCTCTCTCTACTGCCACATCACTATCCAATGTCCCCAAAATGATTCCTCCCAGGGGGAATACAGTCCTCAATCTTCATCTCCCATCCTCCCAATTTTGCCCTAACTTCAATTTCAATACCAACAGATCTCTTTTCACTCTATTCACCTCCACCCACAAGCCTCAATTGCGGTGTAAATTTCGGTCGAGGAGCTCCATTCAATGCCTTTTCACTGGCATTGTTGAAGAAATAGGCCATGTTAAACACTTGGGTGTTGCTGAACATGGAGGATTTGATTTGGAGATTACTGCCAAAACTGTTCTTGAAGGTGTAAATCTTGGAGACAGCATTGCTGTCAACGGAACTTGTCTTACTGTGACTGCTTTTGATCACCAACTATCGAAATTCAAGGTGGGGTTAGCGCCTGAGACGCTCAGGAAGACTTCTTTGGTGGAACTCACGCCTGGTTCACCTGTGAATTTGGAGAGGGCGCTTCAACCAATCAGCCGAATGGGTGGGCATTTTGTGCAAGGGCATGTGGATGGGACTGGGGAGATCATCTCAATGGATCCTGAGGGGGATTCGTTGTGGATTAAGGTGAAGACATCAGAGGCTTTGCTCAATTACATTGTACCAAAAGGATTTATTGCAGTGGATGGAACAAGCTTGACTGTGGTGGATGTTTTTGATGAGGAGAATGCTTTTAACTTCATGTTGGTTGCTTATACTCAGAAAAACGTGGTCATTCCATTGAAGAAAGTTGGGCAGTTGGTGAATTTGGAGGTAGATATTCTTGGCAAGTATGTGCAAAGACTCCTCAGCAATGGTGCCATCGATCCCGTCGAGTCTCCGTGA

Protein sequence

MSTFSSLSTATSLSNVPKMIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQLRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAYTQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVESP
BLAST of ClCG02G017630 vs. Swiss-Prot
Match: RISA_SCHPO (Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rib5 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.6e-45
Identity = 97/199 (48.74%), Postives = 134/199 (67.34%), Query Frame = 1

Query: 74  LFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSK 133
           +FTG+VE IG VK +      GF ++I A  +L+  + GDSIAVNGTCLTVT FD     
Sbjct: 1   MFTGLVEAIGVVKDVQGTIDNGFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRY--H 60

Query: 134 FKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEIISMDPEGDS 193
           F VG+APE+LR T+L +   G PVNLERA+   +RMGGHFVQGHVD   EI+    +G++
Sbjct: 61  FTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEA 120

Query: 194 LWIKVKTSEA-LLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAYTQKNVVIPLKKV 253
           +    +  +  +L YIV KG+IA+DGTSLT+  V  +++ F+ M+++YTQ  V++  K V
Sbjct: 121 IDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHV--DDSTFSIMMISYTQSKVIMAKKNV 180

Query: 254 GQLVNLEVDILGKYVQRLL 272
           G LVN+EVD +GKY ++L+
Sbjct: 181 GDLVNVEVDQIGKYTEKLV 195

BLAST of ClCG02G017630 vs. Swiss-Prot
Match: RISA_PICGU (Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=RIB5 PE=2 SV=3)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-44
Identity = 98/203 (48.28%), Postives = 131/203 (64.53%), Query Frame = 1

Query: 74  LFTGIVEEIGHVKHL---GVAEHGGFDLEIT---AKTVLEGVNLGDSIAVNGTCLTVTAF 133
           +FTG+VE IG V  +        GG  + +       +LE V LGDSI  NG CLTVT F
Sbjct: 1   MFTGLVEHIGTVLQVTEKDTTASGGDGVSMVIGDCSKILEDVQLGDSICTNGVCLTVTEF 60

Query: 134 DHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEIISM 193
           D   S+FKVG++PETLR++ L EL PGS VNLERA++   RMGGH VQGHVD    I++ 
Sbjct: 61  DMARSQFKVGISPETLRRSDLGELKPGSKVNLERAVKADVRMGGHVVQGHVDTIATIVNR 120

Query: 194 DPEGDSLWIKVKTSEALL-NYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAYTQKNVV 253
             +G+++    K  ++    YIV KGFIA+DGTSLTV DV  E++ F+  +V+YTQ+ V+
Sbjct: 121 RGDGNAINFTFKLRDSQYGKYIVEKGFIAIDGTSLTVTDVDHEQSEFSISMVSYTQEKVI 180

Query: 254 IPLKKVGQLVNLEVDILGKYVQR 270
           +PLK  G  VN+EVD+ GK +++
Sbjct: 181 MPLKNSGDSVNIEVDLTGKLIEK 203


HSP 2 Score: 38.5 bits (88), Expect = 1.4e-01
Identity = 32/100 (32.00%), Postives = 44/100 (44.00%), Query Frame = 1

Query: 115 IAVNGTCLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFV 174
           IA++GT LTVT  DH+ S+F + +   T  K  +     G  VN+E              
Sbjct: 148 IAIDGTSLTVTDVDHEQSEFSISMVSYTQEKVIMPLKNSGDSVNIE-------------- 207

Query: 175 QGHVDGTGEIISMDPEGDSL-WIKVKTS--EALLNYIVPK 212
              VD TG++I    E   L +IK +TS    L+  +V K
Sbjct: 208 ---VDLTGKLIEKQIELSLLSYIKDETSPLSTLIGKLVEK 230

BLAST of ClCG02G017630 vs. Swiss-Prot
Match: RISA_ACTPL (Riboflavin synthase OS=Actinobacillus pleuropneumoniae GN=ribE PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-44
Identity = 98/209 (46.89%), Postives = 134/209 (64.11%), Query Frame = 1

Query: 74  LFTGIVEEIGHVKHLGVAEHGGFDL-EITAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLS 133
           +FTGI+EE+G +    + + G F +  I A  VL+ V+LGD+IAVNG CLTVT+F    +
Sbjct: 1   MFTGIIEEVGKIAQ--IHKQGEFAVVTINATKVLQDVHLGDTIAVNGVCLTVTSFSS--N 60

Query: 134 KFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEIISMDPEGD 193
           +F   +  ETL++TSL EL   SPVNLERA+    R GGH V GH+DGTGEI  + P  +
Sbjct: 61  QFTADVMSETLKRTSLGELKSNSPVNLERAMAANGRFGGHIVSGHIDGTGEIAEITPAHN 120

Query: 194 SLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAYTQKNVVIPLKKV 253
           S W ++KTS  L+ YI+ KG I +DG SLTVVD  DE  +F   ++ +T K   +  KK+
Sbjct: 121 STWYRIKTSPKLMRYIIEKGSITIDGISLTVVDTDDE--SFRVSIIPHTIKETNLGSKKI 180

Query: 254 GQLVNLEVDILGKYVQRLLSNGAIDPVES 282
           G +VNLE DI+GKY+++ L     D  +S
Sbjct: 181 GSIVNLENDIVGKYIEQFLLKKPADEPKS 203

BLAST of ClCG02G017630 vs. Swiss-Prot
Match: RISA_YEAST (Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIB5 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.7e-40
Identity = 92/205 (44.88%), Postives = 130/205 (63.41%), Query Frame = 1

Query: 74  LFTGIVEEIGHVKHLGV---AEHGGFDLEIT---AKTVLEGVNLGDSIAVNGTCLTVTAF 133
           +FTGIVE +G V        +E GG  + IT   A ++L   ++GDSIAVNG CLTVT F
Sbjct: 1   MFTGIVECMGTVLENNPYDDSESGGQGVSITIGNAGSILTDCHVGDSIAVNGVCLTVTEF 60

Query: 134 DHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEIISM 193
           ++    FKVG++PET++++++     G+ VNLERA+    R GGH+VQGHVD    I+S 
Sbjct: 61  NND--SFKVGISPETIKRSNVASWIQGTQVNLERAVSQDVRFGGHYVQGHVDTVANIVSR 120

Query: 194 DPEGDSLWIKVK-TSEALLNYIVPKGFIAVDGTSLTV--VDVFDEENAFNFMLVAYTQKN 253
            PEG+S+    +   +    YIV KGFI +DGTSLT+  VD   +  AF   ++ +TQ N
Sbjct: 121 RPEGNSIIFGFQLRDQEYFKYIVEKGFICIDGTSLTIIKVDPLSQGGAFYISMIKHTQDN 180

Query: 254 VVIPLKKVGQLVNLEVDILGKYVQR 270
           V++PLKK+G  VN+EVD+ GK +++
Sbjct: 181 VIMPLKKIGDEVNIEVDLTGKIIEK 203

BLAST of ClCG02G017630 vs. Swiss-Prot
Match: RISA_BACSU (Riboflavin synthase OS=Bacillus subtilis (strain 168) GN=ribE PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 2.1e-37
Identity = 87/198 (43.94%), Postives = 120/198 (60.61%), Query Frame = 1

Query: 74  LFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSK 133
           +FTGI+EE G ++ +  A H    L I    +LE V+LGDSIAVNG CLTVT F    ++
Sbjct: 1   MFTGIIEETGTIESMKKAGHA-MALTIKCSKILEDVHLGDSIAVNGICLTVTDFTK--NQ 60

Query: 134 FKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEIISMDPEGDS 193
           F V + PET++ TSL +LT GS VNLERA+    R GGHFV GHVDGT EI  ++ + ++
Sbjct: 61  FTVDVMPETVKATSLNDLTKGSKVNLERAMAANGRFGGHFVSGHVDGTAEITRIEEKSNA 120

Query: 194 LWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAYTQKNVVIPLKKVG 253
           ++  +K   +L   +V KG I VDG SLT+  +   E+     L+ +T    +   K +G
Sbjct: 121 VYYDLKMDPSLTKTLVLKGSITVDGVSLTIFGL--TEDTVTISLIPHTISETIFSEKTIG 180

Query: 254 QLVNLEVDILGKYVQRLL 272
             VN+E D++GKY+ R L
Sbjct: 181 SKVNIECDMIGKYMYRFL 193

BLAST of ClCG02G017630 vs. TrEMBL
Match: A0A0A0KAI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128550 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 5.8e-135
Identity = 246/282 (87.23%), Postives = 261/282 (92.55%), Query Frame = 1

Query: 1   MSTFSSLSTATSLSNVPKMIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQ 60
           MSTFSSLSTATSL N+P+M+PP G+    LHLPSS F P FNFNT  SLFTLFTSTHKPQ
Sbjct: 1   MSTFSSLSTATSLPNIPRMLPPIGS----LHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQ 60

Query: 61  LRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGT 120
           LR K R R+S+QCLFTGIVEEIGHVK LG++E+GGFDLEI AKTVLEGVNLGDSIAVNGT
Sbjct: 61  LRYKSRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGT 120

Query: 121 CLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDG 180
           CLTVTAFDHQLS+FKVGLAPETLRKTSLVEL+PGSPVNLERA+QPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAY 240
           TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDG SLTVVDVFD+E AFNFMLVAY
Sbjct: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 240

Query: 241 TQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVESP 283
           TQ NVVIPLKKVG LVNLEVDILGKYVQRLLSNGA+ P+ESP
Sbjct: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 278

BLAST of ClCG02G017630 vs. TrEMBL
Match: L0C7R1_MOMCH (Riboflavin synthase OS=Momordica charantia PE=2 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 1.9e-130
Identity = 238/282 (84.40%), Postives = 257/282 (91.13%), Query Frame = 1

Query: 1   MSTFSSLSTATSLSNVPKMIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQ 60
           MSTFSSLSTAT+LS +PKM+PP GNT+LN+   S  FC  F FNTNRSLFTLFTS+ KPQ
Sbjct: 1   MSTFSSLSTATALSQIPKMVPPGGNTILNVRPGSPHFCLKFKFNTNRSLFTLFTSSCKPQ 60

Query: 61  LRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGT 120
           LRCK R R+SIQCLFTGIVEE+G VK+LGV E+GGFDLEI AKTVLEGV+LGDSIAVNGT
Sbjct: 61  LRCKSRPRTSIQCLFTGIVEEMGRVKNLGVTENGGFDLEIVAKTVLEGVHLGDSIAVNGT 120

Query: 121 CLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDG 180
           CLTVTAFDH+LS+F VGLAPETLRKTSLVEL PGSPVNLERA+QPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHELSEFTVGLAPETLRKTSLVELVPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAY 240
           TGEIISM+PE DSLWIKV+TSE LL YIVPKGFIAVDGTSLTVVDVFDEE AFNFMLVAY
Sbjct: 181 TGEIISMEPEEDSLWIKVRTSEDLLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFMLVAY 240

Query: 241 TQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVESP 283
           TQ +VVIPLKKVG LVNLEVDILGKYVQRLLSNGAI P++SP
Sbjct: 241 TQNSVVIPLKKVGDLVNLEVDILGKYVQRLLSNGAITPIKSP 282

BLAST of ClCG02G017630 vs. TrEMBL
Match: A0A0A0KAI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128010 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.5e-101
Identity = 204/282 (72.34%), Postives = 218/282 (77.30%), Query Frame = 1

Query: 1   MSTFSSLSTATSLSNVPKMIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQ 60
           MSTFS LSTATSLSN+P+M+PP GN    LHLPSSQF PNFNFNT  SLFTLFTSTHKPQ
Sbjct: 1   MSTFSYLSTATSLSNIPRMLPPMGN----LHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQ 60

Query: 61  LRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGT 120
           LR K R R+S+QCLFTGIVEEIGHVK+L                          I  NG 
Sbjct: 61  LRYKSRPRASVQCLFTGIVEEIGHVKNL-------------------------GIDENG- 120

Query: 121 CLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDG 180
                 FD +++           RKTSLVEL+PGSPVNLERA+QPISRMGGHFVQGHVDG
Sbjct: 121 -----GFDLEIN---------ARRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAY 240
           TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDG SLTVVDVFD+E AFNFMLVAY
Sbjct: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 238

Query: 241 TQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVESP 283
           TQ NVVIPLKKVG LVNLEVDILGKYVQRLLSNGA+ P+ESP
Sbjct: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 238

BLAST of ClCG02G017630 vs. TrEMBL
Match: M5VH27_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009738mg PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.9e-98
Identity = 193/282 (68.44%), Postives = 227/282 (80.50%), Query Frame = 1

Query: 1   MSTFSSLSTATSLSNVPKMIPPRGNTVLN-LHLPSSQFCPNFNFNTNRSLFTLFTSTHKP 60
           +S   SL + T   +V KM      ++LN  H  +S+   NF+     S  TLF ST +P
Sbjct: 4   VSASLSLPSRTPEPSVRKM------SILNKFHSVASRTHCNFDAIFKPSTLTLFISTQRP 63

Query: 61  QLRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNG 120
               K   R++I+CLFTGIVEE+G +K LG AE+GGFD++I AKTVLEGV+LGDSIAVNG
Sbjct: 64  HAHIKSPPRNTIRCLFTGIVEEMGQIKQLGTAENGGFDMKIGAKTVLEGVHLGDSIAVNG 123

Query: 121 TCLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVD 180
           TCLTVT FD QLS F VGL+PETLRKTSL+EL PGS VNLERA+QP SRMGGHFVQGHVD
Sbjct: 124 TCLTVTEFDTQLSDFTVGLSPETLRKTSLIELEPGSLVNLERAVQPTSRMGGHFVQGHVD 183

Query: 181 GTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVA 240
           GTGEI+SMDPEGDSLWIKVK S+ LL Y+VPKGFIAVDGTSLTVVDVFD+E++FNFMLVA
Sbjct: 184 GTGEIVSMDPEGDSLWIKVKASKELLKYVVPKGFIAVDGTSLTVVDVFDKEDSFNFMLVA 243

Query: 241 YTQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVES 282
           YTQ+NVVIPLKKVGQ VNLEVDILGKYV+RLLS+G ++ ++S
Sbjct: 244 YTQQNVVIPLKKVGQKVNLEVDILGKYVERLLSSGFVESIKS 279

BLAST of ClCG02G017630 vs. TrEMBL
Match: A0A0J8BQF4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206550 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 4.5e-95
Identity = 188/278 (67.63%), Postives = 222/278 (79.86%), Query Frame = 1

Query: 6   SLSTATSLSNVPKMIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQLRCKF 65
           ++  A SL + PK+  P+ +     +LPS+      N   N  L  +F +T K     KF
Sbjct: 2   AIEVALSLFS-PKISQPKLSIHNFYNLPSNGRL-KLNSEFNNPLPKIFLTTRKTHQTLKF 61

Query: 66  RS-RSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGTCLTV 125
           +  ++ I CLFTGIVEE+G VKHLG AE+GGFDL+I AKTVLE V LGDSIAVNGTCLTV
Sbjct: 62  QPHKNQINCLFTGIVEEMGKVKHLGYAENGGFDLKIGAKTVLEDVKLGDSIAVNGTCLTV 121

Query: 126 TAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEI 185
           T F+ +LS+F VGLAPETLRKTSL+EL PGS VNLERALQP +RMGGHFVQGHVDGTGEI
Sbjct: 122 TEFNTELSEFTVGLAPETLRKTSLIELEPGSAVNLERALQPSTRMGGHFVQGHVDGTGEI 181

Query: 186 ISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAYTQKN 245
           +S+DPEGDSLW+KVKTS  LL YIVPKGFIA+DGTSLTVVDVFD+E  FNFML+AY+Q+N
Sbjct: 182 VSLDPEGDSLWVKVKTSRELLKYIVPKGFIAIDGTSLTVVDVFDDELCFNFMLIAYSQQN 241

Query: 246 VVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVESP 283
           VVIPLKKVGQ +NLEVDILGKYV+RLLS+G +D V+SP
Sbjct: 242 VVIPLKKVGQKLNLEVDILGKYVERLLSSGFLDSVKSP 277

BLAST of ClCG02G017630 vs. TAIR10
Match: AT2G20690.1 (AT2G20690.1 lumazine-binding family protein)

HSP 1 Score: 313.2 bits (801), Expect = 1.7e-85
Identity = 168/263 (63.88%), Postives = 200/263 (76.05%), Query Frame = 1

Query: 16  VPKMIPPR----GNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQLRCKFRSRSSI 75
           +PK+  P+    G +V NL          F+  +  S  +L TS  + +   + R   SI
Sbjct: 12  IPKVCLPQSFRTGESVTNLR---------FDCVSKSSKLSLKTSCGRSRTHHR-RQNLSI 71

Query: 76  QCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGTCLTVTAFDHQL 135
           + +FTGIVEE+G VK LG+A+HGGFDL+I A+ VLE V LGDSIAVNGTCLTVT F+ + 
Sbjct: 72  RSVFTGIVEEMGEVKDLGMADHGGFDLKIGARVVLEDVKLGDSIAVNGTCLTVTEFNAE- 131

Query: 136 SKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEIISMDPEG 195
            +F VGLAPETLRKTSL EL  GSPVNLERALQP+SRMGGH VQGHVDGTG I SM+ EG
Sbjct: 132 -EFTVGLAPETLRKTSLEELKKGSPVNLERALQPVSRMGGHVVQGHVDGTGVIESMEVEG 191

Query: 196 DSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAYTQKNVVIPLKK 255
           DSLW+KVK  + LL YIVPKGF+AVDGTSLTVVDVFDEE+ FNFM++AYTQ+NVVIP KK
Sbjct: 192 DSLWVKVKADKGLLKYIVPKGFVAVDGTSLTVVDVFDEESCFNFMMIAYTQQNVVIPTKK 251

Query: 256 VGQLVNLEVDILGKYVQRLLSNG 275
           +GQ VNLEVDI+GKYV+RLL++G
Sbjct: 252 IGQKVNLEVDIMGKYVERLLTSG 262

BLAST of ClCG02G017630 vs. NCBI nr
Match: gi|778712868|ref|XP_011656951.1| (PREDICTED: riboflavin synthase-like [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 8.3e-135
Identity = 246/282 (87.23%), Postives = 261/282 (92.55%), Query Frame = 1

Query: 1   MSTFSSLSTATSLSNVPKMIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQ 60
           MSTFSSLSTATSL N+P+M+PP G+    LHLPSS F P FNFNT  SLFTLFTSTHKPQ
Sbjct: 1   MSTFSSLSTATSLPNIPRMLPPIGS----LHLPSSHFFPKFNFNTKTSLFTLFTSTHKPQ 60

Query: 61  LRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGT 120
           LR K R R+S+QCLFTGIVEEIGHVK LG++E+GGFDLEI AKTVLEGVNLGDSIAVNGT
Sbjct: 61  LRYKSRPRASVQCLFTGIVEEIGHVKSLGISENGGFDLEINAKTVLEGVNLGDSIAVNGT 120

Query: 121 CLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDG 180
           CLTVTAFDHQLS+FKVGLAPETLRKTSLVEL+PGSPVNLERA+QPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHQLSEFKVGLAPETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAY 240
           TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDG SLTVVDVFD+E AFNFMLVAY
Sbjct: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 240

Query: 241 TQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVESP 283
           TQ NVVIPLKKVG LVNLEVDILGKYVQRLLSNGA+ P+ESP
Sbjct: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 278

BLAST of ClCG02G017630 vs. NCBI nr
Match: gi|429537129|gb|AFZ99647.1| (riboflavin synthase [Momordica charantia])

HSP 1 Score: 473.4 bits (1217), Expect = 2.8e-130
Identity = 238/282 (84.40%), Postives = 257/282 (91.13%), Query Frame = 1

Query: 1   MSTFSSLSTATSLSNVPKMIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQ 60
           MSTFSSLSTAT+LS +PKM+PP GNT+LN+   S  FC  F FNTNRSLFTLFTS+ KPQ
Sbjct: 1   MSTFSSLSTATALSQIPKMVPPGGNTILNVRPGSPHFCLKFKFNTNRSLFTLFTSSCKPQ 60

Query: 61  LRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGT 120
           LRCK R R+SIQCLFTGIVEE+G VK+LGV E+GGFDLEI AKTVLEGV+LGDSIAVNGT
Sbjct: 61  LRCKSRPRTSIQCLFTGIVEEMGRVKNLGVTENGGFDLEIVAKTVLEGVHLGDSIAVNGT 120

Query: 121 CLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDG 180
           CLTVTAFDH+LS+F VGLAPETLRKTSLVEL PGSPVNLERA+QPISRMGGHFVQGHVDG
Sbjct: 121 CLTVTAFDHELSEFTVGLAPETLRKTSLVELVPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAY 240
           TGEIISM+PE DSLWIKV+TSE LL YIVPKGFIAVDGTSLTVVDVFDEE AFNFMLVAY
Sbjct: 181 TGEIISMEPEEDSLWIKVRTSEDLLKYIVPKGFIAVDGTSLTVVDVFDEEKAFNFMLVAY 240

Query: 241 TQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVESP 283
           TQ +VVIPLKKVG LVNLEVDILGKYVQRLLSNGAI P++SP
Sbjct: 241 TQNSVVIPLKKVGDLVNLEVDILGKYVQRLLSNGAITPIKSP 282

BLAST of ClCG02G017630 vs. NCBI nr
Match: gi|659133869|ref|XP_008466932.1| (PREDICTED: riboflavin synthase, partial [Cucumis melo])

HSP 1 Score: 445.7 bits (1145), Expect = 6.2e-122
Identity = 224/252 (88.89%), Postives = 236/252 (93.65%), Query Frame = 1

Query: 19  MIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQLRCKFRSRSSIQCLFTGI 78
           M+PP GN    LHLPSSQF PNFNFNT  SLFTLFTSTHKPQL  + R R+S+QCLFTGI
Sbjct: 1   MLPPMGN----LHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQLCYRSRPRASVQCLFTGI 60

Query: 79  VEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSKFKVGL 138
           VEEIGHVK+LG+ E+GG+DLEI AKTVLEGVNLGDSIAVNGTCLTVTAFDHQLS+FKVGL
Sbjct: 61  VEEIGHVKNLGIGENGGYDLEINAKTVLEGVNLGDSIAVNGTCLTVTAFDHQLSEFKVGL 120

Query: 139 APETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKV 198
           APETLRKTSLVEL+PGSPVNLERA+QPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKV
Sbjct: 121 APETLRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDGTGEIISMDPEGDSLWIKV 180

Query: 199 KTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAYTQKNVVIPLKKVGQLVNL 258
           KTSEALLNYIVPKGFIAVDGTSLTVVDVFD+E AFNFMLVAYTQKNVVIPLKKVG LVNL
Sbjct: 181 KTSEALLNYIVPKGFIAVDGTSLTVVDVFDDEKAFNFMLVAYTQKNVVIPLKKVGHLVNL 240

Query: 259 EVDILGKYVQRL 271
           EVDILGKYVQRL
Sbjct: 241 EVDILGKYVQRL 248

BLAST of ClCG02G017630 vs. NCBI nr
Match: gi|700191536|gb|KGN46740.1| (hypothetical protein Csa_6G128010 [Cucumis sativus])

HSP 1 Score: 376.7 bits (966), Expect = 3.5e-101
Identity = 204/282 (72.34%), Postives = 218/282 (77.30%), Query Frame = 1

Query: 1   MSTFSSLSTATSLSNVPKMIPPRGNTVLNLHLPSSQFCPNFNFNTNRSLFTLFTSTHKPQ 60
           MSTFS LSTATSLSN+P+M+PP GN    LHLPSSQF PNFNFNT  SLFTLFTSTHKPQ
Sbjct: 1   MSTFSYLSTATSLSNIPRMLPPMGN----LHLPSSQFFPNFNFNTKTSLFTLFTSTHKPQ 60

Query: 61  LRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNGT 120
           LR K R R+S+QCLFTGIVEEIGHVK+L                          I  NG 
Sbjct: 61  LRYKSRPRASVQCLFTGIVEEIGHVKNL-------------------------GIDENG- 120

Query: 121 CLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVDG 180
                 FD +++           RKTSLVEL+PGSPVNLERA+QPISRMGGHFVQGHVDG
Sbjct: 121 -----GFDLEIN---------ARRKTSLVELSPGSPVNLERAVQPISRMGGHFVQGHVDG 180

Query: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVAY 240
           TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDG SLTVVDVFD+E AFNFMLVAY
Sbjct: 181 TGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGASLTVVDVFDDEKAFNFMLVAY 238

Query: 241 TQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVESP 283
           TQ NVVIPLKKVG LVNLEVDILGKYVQRLLSNGA+ P+ESP
Sbjct: 241 TQTNVVIPLKKVGHLVNLEVDILGKYVQRLLSNGAVKPIESP 238

BLAST of ClCG02G017630 vs. NCBI nr
Match: gi|645246016|ref|XP_008229154.1| (PREDICTED: riboflavin synthase [Prunus mume])

HSP 1 Score: 369.4 bits (947), Expect = 5.6e-99
Identity = 194/282 (68.79%), Postives = 228/282 (80.85%), Query Frame = 1

Query: 1   MSTFSSLSTATSLSNVPKMIPPRGNTVLN-LHLPSSQFCPNFNFNTNRSLFTLFTSTHKP 60
           +S+  SL + T   +V KM      ++LN  H  +S+   NFN     S  TLF ST +P
Sbjct: 4   VSSSLSLPSRTPEPSVRKM------SILNKFHSVASRTHCNFNAIFKPSTLTLFISTQRP 63

Query: 61  QLRCKFRSRSSIQCLFTGIVEEIGHVKHLGVAEHGGFDLEITAKTVLEGVNLGDSIAVNG 120
               K   R++I+CLFTGIVEE+G +K LG AE+GGFD++I AKTVLEGV+LGDSIAVNG
Sbjct: 64  HAHIKSPPRNTIRCLFTGIVEEMGQIKQLGTAENGGFDMKIGAKTVLEGVHLGDSIAVNG 123

Query: 121 TCLTVTAFDHQLSKFKVGLAPETLRKTSLVELTPGSPVNLERALQPISRMGGHFVQGHVD 180
           TCLTVT FD QLS F VGL+PETLRKTSL+EL PGS VNLERA+QP SRMGGHFVQGHVD
Sbjct: 124 TCLTVTEFDTQLSDFTVGLSPETLRKTSLIELEPGSLVNLERAVQPTSRMGGHFVQGHVD 183

Query: 181 GTGEIISMDPEGDSLWIKVKTSEALLNYIVPKGFIAVDGTSLTVVDVFDEENAFNFMLVA 240
           GTGEI+SMDPEGDSLWIKVK S+ LL Y+VPKGFIAVDGTSLTVVDVFD+E++FNFMLVA
Sbjct: 184 GTGEIVSMDPEGDSLWIKVKASKELLKYVVPKGFIAVDGTSLTVVDVFDKEDSFNFMLVA 243

Query: 241 YTQKNVVIPLKKVGQLVNLEVDILGKYVQRLLSNGAIDPVES 282
           YTQ+NVVIPLKKVGQ VNLEVDILGKYV+RLLS+G ++ ++S
Sbjct: 244 YTQQNVVIPLKKVGQKVNLEVDILGKYVERLLSSGFVESIKS 279

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RISA_SCHPO3.6e-4548.74Riboflavin synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ri... [more]
RISA_PICGU1.4e-4448.28Riboflavin synthase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / D... [more]
RISA_ACTPL1.4e-4446.89Riboflavin synthase OS=Actinobacillus pleuropneumoniae GN=ribE PE=3 SV=1[more]
RISA_YEAST7.7e-4044.88Riboflavin synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=... [more]
RISA_BACSU2.1e-3743.94Riboflavin synthase OS=Bacillus subtilis (strain 168) GN=ribE PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KAI5_CUCSA5.8e-13587.23Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128550 PE=4 SV=1[more]
L0C7R1_MOMCH1.9e-13084.40Riboflavin synthase OS=Momordica charantia PE=2 SV=1[more]
A0A0A0KAI2_CUCSA2.5e-10172.34Uncharacterized protein OS=Cucumis sativus GN=Csa_6G128010 PE=4 SV=1[more]
M5VH27_PRUPE1.9e-9868.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009738mg PE=4 SV=1[more]
A0A0J8BQF4_BETVU4.5e-9567.63Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206550 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT2G20690.11.7e-8563.88 lumazine-binding family protein[more]
Match NameE-valueIdentityDescription
gi|778712868|ref|XP_011656951.1|8.3e-13587.23PREDICTED: riboflavin synthase-like [Cucumis sativus][more]
gi|429537129|gb|AFZ99647.1|2.8e-13084.40riboflavin synthase [Momordica charantia][more]
gi|659133869|ref|XP_008466932.1|6.2e-12288.89PREDICTED: riboflavin synthase, partial [Cucumis melo][more]
gi|700191536|gb|KGN46740.1|3.5e-10172.34hypothetical protein Csa_6G128010 [Cucumis sativus][more]
gi|645246016|ref|XP_008229154.1|5.6e-9968.79PREDICTED: riboflavin synthase [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001783Lumazine-bd
IPR017938Riboflavin_synthase-like_b-brl
IPR023366ATP_synth_asu-like_sf
IPR026017Lumazine-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG02G017630.1ClCG02G017630.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001783Lumazine-binding proteinPANTHERPTHR21098RIBOFLAVIN SYNTHASE ALPHA CHAINcoord: 59..272
score: 1.6E
IPR001783Lumazine-binding proteinTIGRFAMsTIGR00187TIGR00187coord: 74..274
score: 1.2
IPR017938Riboflavin synthase-like beta-barrelunknownSSF63380Riboflavin synthase domain-likecoord: 74..165
score: 2.55E-19coord: 168..272
score: 7.57
IPR023366ATP synthase subunit alpha-like domainGENE3DG3DSA:2.40.30.20coord: 78..179
score: 5.4E-29coord: 180..272
score: 1.8
IPR026017Lumazine-binding domainPFAMPF00677Lum_bindingcoord: 76..162
score: 4.1E-22coord: 175..261
score: 3.5
IPR026017Lumazine-binding domainPROFILEPS51177LUMAZINE_BINDcoord: 74..172
score: 24.644coord: 173..271
score: 22
NoneNo IPR availablePANTHERPTHR21098:SF0RIBOFLAVIN SYNTHASEcoord: 59..272
score: 1.6E

The following gene(s) are paralogous to this gene:

None