CsGy6G005210 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G005210
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionLow-density lipoprotein receptor-related
LocationChr6 : 4796973 .. 4807568 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCAAATTTTTGTCATGTAGTGATTTTTGTTGGTATAAATGGTTTGATTTTTTTTAATTTCTTGAAAAAAGTATCATTCTTATTTGTGTAAATGACGATAATGGAAAAGTAATAGAGTCCCCTTGTGCCACGTATGCAAAAGTTAATTCCTCTTTTAATAAGAATACAAATTATATTTTTTAGAAAAAAGAAAAATATTACCTAAATTTAAACTGCGAAACAACACTGCCCATAAGAGACAAAAATGTGAAATAGAAACAGCGATAAATACCAATGAGAAAACTCCGAGCTTCTCTTCTTCTTGCCTGATCTAACCATTTCAACTCCATCGCGGGAATCTCTGAGCTCTCTCTCTCTCTCTCTCTATCTATCTCTTTCTTCTAGACATAGCCACCGGAAACAATGGCGTCGTCGACGGCTAAGATTACGTTTCGTGTTATCATGGTGGTGATCCTCCTCCTCGTCTTGTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCTACTGTACATGATATTCGTCAGAACAAACAGACCGTCAAAGAAGGTGCGTTAATTGAATGCTAAATCTGTATGTTTATGCTTGTCTCAGTTCTGACTTAGAGTTTGAATTCTTCGTTCTGGACCTGCATTTCAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCATGATGAGTCGGACTCGGGCGTTCATGATGGAAATGATGGAAAGAAAGCCGGATCGGGTGCTATTCGGAGGCTGCTTCATCAGGTTTTGTGAAAATCTTAGTTATTTGAATTGTGATTAGTCCTGGAGAATTGAATTGTTTCACATGCATTAGTAAAGTTCAATTAGCGGATCTGGATTTTTTTTTTTTTTTTTTTTTTTTTTGCCCTTAATAACGTGTGTTATAATGACTGAATTAGCACCTACTGAATCTATTTAGTTAAAGGAAGGCAAAAAAAAAAAAAAAGATGAAGAAATCGTAATGCTTCGGCGTTCAGTCTTCACCGTTTCCATTATGCATCGTTAGTCACTCGGATGTGTGGATAGTGATATTTGTACTTAGATGTGGTGACCTACTGCTTGCGAAAACTCATTTTGACACACACACACACAAAAGAAAAAAAAAGAAGAAGATATTGTTAGTTTGTATCGAGCGGAATTGGCTGATAATGTGAATTGGAATTTTGTAGTTTAAGACTGAATGTTTGGTAAAGGTGGAAATGCGTACATAGGATGATGAACTAAAGATGACAATGGCCTTTTGTAATGGTTTTTGTTACTGTGAGTCCGTGACGGGCTAATTGGGCATTCTGGTGCTGAAGGAGCGATTTGAAACAAAATCAACTAATTGAAGTATAATGGAGAAGGCTTCAATAAAAAGATTGTACAAAATAATGATGGATGCCTCTGAACCTTTCTAGATAGATCCAAGACTTGGTGGAGCTGTAGTTAACCATAAAAACCCATAATGCCCTGCTGTTTAATCATGTTTCCTTGTGCTTTTTATTCATAAGCTCAAATGCAGCAACCATGACAAATCTTACTTGGCAGTGTGCCCTTCACTTGTGGTAACTCCCAAGTCCTAATGGTGAAATTAGTAGTTGCCTTTGTATACCTATCTCATCTCGTCCTCATAAACATGAGAAGGGAGATGAGAAAGGAATTCCTGCAGAATGTTTACACATAGATATGATAATCATGTCTGCATATGTGACAGTCTGATGTAACGTGGTTTTCTGTAGGAACATACACGCTAAAATTGATTTTACGGACTCTAGACTCTTATTCCCAATCAAGGTAGAAGGAAACTGACCTAAGATTTATTCATCTTATGATCTTTCTTAGTTAATCAACCCTTTACTATAGGGTGATTAGTAAGTTTCAGAATTAGGATTTTGAATGATCGATTCATCTTATGATAAAGGGTGACTAATATTTCTTAGTTAGCCAACCCAGTACTATGATAAAGGGTGACTAATAAATTTCAGAACTAGGATTTTGAATGATTGAGCGAGCTATAATGTATTGGTTTCTACGGGAACTAGAAATATTTTAACTCTTCTTAGTAGTCTAAAGTCTGAATTGGTTGAGCTGAACAACTTAGAATCTCTCCATAGTATTGTTCCCCACTAAGATCACTAAATCTCATGGATCTCCATGAAAGAACTGCCCCTAGAATACGATGGATTTTTAAATTTTAATTTGATATTATACATAAAATATCGTAACACTGGATAATTGAAGCTCATGAATCTCCAGTCTACTTCAGAAAAATTTCAAACCAGAGGAGACTTGGAACTATTTCAGTTTGGGCAATTCATCTTGCTAAATAATGACACAAAATAACCTTAAAGCAGTAGCATACATCATGGATCAGCAACTTGATTGTTCGTTGTGTTATGAAAAACTTGGAACGAAGTCTTTTCTAGTTGAGCAATATTCTGGGGAAACAAGATTAAGAAGAAATATTGAATCTAGCAGTCTTTGTTGATGTTATTATCTGGTACTCAAACATCACCCTCAATAAAATATTTTCTACAACGGAGATACCATTTTGTTTCGTTTTACTCAAGTTTTTATAACTTATGCTAAATTAGGTCAGGCTAATTGGATATGCAAGAAGTATTTCTTTGAAATGCTCGCTACGAGGTGTTTAATGTTGTTCATAAGTAATACATGCTTTGTATCCATTCACAGACTTGGACACTTAGTGTTTATTTTTACCTAAATTCATCGACAATTTTCAAATATTCACGCAAATATATCTGACACATAGGTGCCATACGACTTACAAGTATCCATTGAAATGCTCAACCATCCAAGAATTTCACCTTCCTCCTAAAGAGAAAGGTTACACTCTTGTAGATTAAAGATCCTTCTTTCAGATAAATGATCAAAATCTTTCTCCAAAGAGCGTCTGGGAATCATCCTCTCTTTGTCTTCAATATATAACTTTTTATTATGCTAGTGACACGTCGACTTGCTTAGGTTAGCCTCTGATCTAGTATTGATGTTAACTTTCGGGATTACATAGTTGAAATTATATATGTATACACACATTTGGTATTGCACCCTCCAAATCGAGCCATAGAAATCCTCTTCTGATGTTTTGTCAACGCAAAAAAGGTGCACTCAGACACAATTGGTAAAGCTTTTATCTACTTTTCAAATCAACTAGAAAATTAAGAGTCCTCAAATATTTATAAACGCACACCAATCCTAATCTTGTTCACAATGCGGAACTCCTTCGGAATCTTAAATACAACCTTCTTTTAGCATTGACGTGACACAGGAAAGTGACATGGTTTAGAAAATACCTCCTCACACATTGAAAACTTTCATACAGATCTCATCAAACAGAAGAACCATAACTTCACAAGGACCCCAAGAAAATGGAAAAACTACATTCCCATCAACTGTGACTCTTAAGAAGTATTCTCTTGGCTTTTGGGTTCAGCTTAGAATATCAATTCTGTCGAAGGGATTGACCCACCAGCAGCCACAATTTGTTGCTCCATCTGCAATTAACAATTTAACATGTAATTTTGTTAAAATTAAGAAAGATTTGCTTGTTCTTCAGAACAAGTCTTATGTACTGACCCTGAATAAATTCTCAAGCTTGTTTTTCACGAGGCAGGTCTCTTGCTTTAATTGTTGCAGACATCTTAGGCATCTGCATCAAAAATGTTTCATAGTTTCTATAAGCTGATTTTATTCAATAATTCCACACATGCTGAAGGAGTTCAACAAGAAAATCTTTTGATTTTGTTCTAATAGTAATACATCAGTTTTTTTTTTTTTTCTTTTTTTGCTAACAGGCTAAAATAATGATGAGAAAAACTTTGACAATGATTGTATGTTATGGTAAAAATTTGAAGTTTTAAATGTAAAAGGTAGATAAAAGTTCTAGTTCCATAAACGAACTTCATGAAATTTAGGGGCCTGGATAAAATTCAAGAACCAAAACTTGAGCCTCAGCATCATATATAACCCTGCTTAGTCTTCAATAAATAAGAACTCACCCATCAATGTTCTGTTCCTCACAGAAGCTTCGCATGGCTATACAGACATTTTTAACTCTCTGTGCACCTATGCTGTTAATCACAAAAGTTACAAAATCCTTCATTCAGTTAAATTTTTTGTGATAACAATATTTATTTCTCTTTAGAATTTGAAAATGGTTCTGAGAGAGAGTTTATCACAAGCTACCAAATGAAAACTTTATTCCTCTATGTTTTAAAATTAAGGAAAGAAAAACTGGTTGTTTGGCAGCTACTAATGCAAGATAGCCCTCCTCTTTTTAGACCAAAAAAATTAGTTTAAAGCATGTTGAGTAATTGTTTCCTCAAATATCATAACTTTGCAAACAAATCCATAAAACTAATTGTTAGCTCCTAAAAGCCTTTTTTAACAGAAACATATGAGGAAAATCAGGTACTAGAGGGAGAGGCTTTTTTAATAAGTTTCATTCTTATACCTTGAACTGCTTCCTTTAAGCTGGTGAACATGGCCGTCAACCTTTTGAAAGTCCACATCAGGTTGATCACTGTAAAAGGCAAGGGAAGACGGTAAAAAAAAAAACCTTTGTGAATCTCAGGAAAAACTCGTATCAAAACCAAGAAACTCATAGATAGAGAAGCCTCACAACGCTGCTGTGAGATCATTGAGAAGCCTCTCGGAATCCTCAAAGAAAAGAGACACCACTTCAACAATGAAATCTGGATTGCCCTCATCTTGCAATTTCTGCAGCTCTATAAACTGACTGTCCAAGAAGTCCTAGCTCTCCCCAACAAATAGAAAGCACCAGAAACCAAATTCAAGAATTAAGAAACTGAGGCTACAAAAATATAAGCGTCAACCTAAATTCTTTTGTAACTGCAACCTTTCCATGAAACAAACCCAAAAACTTATAGTTTTTTGGGGTTCTCTCTCCTTGATCCCCTAAGACTACAAAAATATATCATATGTTTCTTATCTAAAAAAACTGCAAAAGAAGAAATCCCAATCTCTCAACACCAAAAGCCAAACACAAGAATCAAGATTACAGAACGAGAAAAACAAAACCCATCTCTAGTTTGATCTTAGTTTATGTTCATACCTCCAAGAATAGAGACTTCGTGTAATCAACCCATTGTCTCTGCATCAACCCCACCTCCATGCTTACACTACACACACACACAAAAAGAAAAAACTCTGTTATTAAAACTGCAACCCAACAAAGCCACCTACCTTAAATTGCAGAACTTGAGCAATAATTGCATCACTCAAAGGGTTAGAGTGCCAGAAAACCTTTTAAAAAAATTATTGGTGAGAGATGATGATTCTTAATGATCGTAGTAGCACTAGCAACAAAGCAATGCAAAGCTTTCTCCTTATTTTTAGGTATTTTTGGTTGTACTTAAACTAGCAGACGAACACAACACAACAACTTTTCATCTTCTCTGGATTTGTGCACTACTGATAATTTGTGTCCCCAAACCTCTACAGTTTTGCTCTCTCTCTCTCTCTCTCTCCCCCCTTTTTCCCTTTCGGCCTTTGTGTCATTTATTCATTTTTATGAACTTCTCAACTCTGAAAGTATCCCTTTGTTTACCATTTCGTCTCCTTTTTAGTGTTTTATTTTCCTGCTCTCTCTCTCTCTCTCTCTCTCTGTAGTTTATAATATTCCTTTTCCTTTTTGTGTCTCTCTTTTTTTCTCCTGAGAAACTATTGGTTGTAGTTAATCTTTGAATTTAAGCTTGATGATGTGTATATAGGAAATTGTTTTAGGTTCTCTTTCAATGAATTTGGAATAGAAGGTATCTTAGTGAAACTTTTAGCAAGGCAAAGTTGGTCTTGCCATGCGCCACTTCTATTGGTCCAACTATTACCATATTCTATTTTGGTCTTTCATTCTTCGACTTTTAATTTCTTTTAAGTACAAAAGGAGTTGGGTATTTGAACCTAAACTTCGTGTTACTAATACTAATACCGTAATACATACAAATATCAATTAAGTTAACTTATTTTTCTCGTAAATGTTTGTTTCATGGATTTTGACATGAATTTCTTGGTAGACTTTTGACATCTTCCTTTGTTTTATCGGATTTCACTTTTTAATATGCAGTATATTATTGTTTAGAAAACTTAATAATAAATCAAATGTGGATTTTTAGTATTCTCCTTACGGTGGGAACGTGGAATTTCAATACCGAAGAATTAACGGTGAAATATAAACTCGTTAATTATTATTTACTAGTTACTTTTAATTAATTATTTCAAGCAATTATTGTACATTTAGGATCTGTTTAATGGGGATTCTAAAATGTTTAATTTTGTCAAAAAAAAAAAAAAAAAACTATTTTGAAAATAATAGTAGTGTTTGGCAAATTAAAATAATGCATTTTTTAAAAATTCATTTATAAAATAATTTATTTTAAAGAAATCTTTAAAAACCAAATTCAGGTAAAGGAGTCTAACCAAACATTAATTGTTTAAATTTTAAACTCATTTCCAAAAAATGCTTAAAAGGAAATGTATTATTGAAAAACATTTTCTTTTTAATTCAATCCAAACGGACCTTTAATTCGTTAATTATAATTTTCATAAACAACATGCCTATATTATATTAAAAATATTAAATCATTAATTGTACTATCTTCATATGTCATATATGTTATTATTTAATATTGGCTTCCATATACAAATTTGGTAAAACAAACCCATATATTTAAATTTTAAATATTTAATATCTATACTACTCATAAAACAATATATGTATTTCAAAATGATAGTATAACATAATCGTCTTGGTATGGTATGGTACAATAGCAAAAGTTGTTATTCATTTGTGAAGTTTGGTCTTTAGTGAAATTTCATGTGTCCTTCGGACTTCGGTTTTTAAGCTTTATTTTAACTGTTCTCTTAGTAATATTTTATTTAGTTGGAACTCCTCTCTTTAATAGGGGTGTTTTAGTAGATTTGTATTCGTCGATGGATTTAGTATAGACCCAAGGACTTGAGCCCTCTCAACTTCACACACACATATATAAAGCTGAAATAATATCGGTGTCAGTAGCTAGCTCTGGTAAAACTGTCATTCAACCCCCTTTAGACTCAGGTTCAAGTCTCACTCCTTTCAACAGAATTTCTGGATCTACCACTAGTTGTATTATTTCATCTTTTTTCTCGATAAAATCATTTTATGAATAATTTAGAACATTTATGCTAAAGATTAGAAGATGTGAACTAAGACTTTAACTAAGTTAAAACCTCAAAGACGAACCAAATGAACATAACTCACCAATAATTAACACAACCTTCCATCATAGAAATGGAAGGTTCGATCCTCCATTCCAACCATTGTTGGGAAAAAAACTTCAAAAACCATAAATCGACGTATTGAAACGAATAATCTATCATTTCAACATAACCTTGTCTTTTCATATTTTGTAATATATATTTTTAAAGTTCTGACGCAATATTTAAAAGTGGAAACTTTGAGACTTCAATCCTCTTAAAGACATGTATATGTCTTGCCGAGTTAAGTTATGCTCATGTTAGTTTTATCAAGATATATTACATATAAAATTAATATTTTAATACGACGTTAATGTGAAGCCAGAAGGAATCTGATTGGGCAAATCGGACAGCTGTTGTTTGATTTGTTTTAGTTGGTTTTGATTAACCAAAGAAGGGACAGAAAGTTGGACCAAAATTATGCCATTGGAAACCCCTTTTTCTTTGAGAGGTACCAAAAAAAAAATGGTGCCTTAGCATTTTGGTCGGCTGCCATTTGTTTCTTTGAGACATTAAGGACGTGGATGGGGAATCCTTATCTCTTTTTTTTCTTTTCATTTTTTTATATTTCTTTGGGAGGATGATATGAGAATGAGATGACTCCCCATAGTCCTCTGATAATATATATTTATAAGGAGAAAAAGAATTGAAGTAATGATGGGTTGGATTGGAACCATATTCTCATCGTTAAGAGTAAAAAGTAAAATGTTCTATTTGGCTTCAAAGAGGATAGAAGTTAGAACTACAGTGTGTGATTTTGGATTGGATTTAACCCAAATTAAACGGTACCCTTTTCTCTTAGTACCTTTGGATTTAACGTTTGTCGTATCTTATGTAGCTTAACCCAAAATCTACCCTTTATAATTTGATTTATCAAATACATTTAAGGGATCTTTATTTTGTTCATTTTATCTATTGTTTGATCATAGAAAGTTCAACACACGTTCTATAGTAGATAGATAGGTTTAGGTAATTACAATGGATACCAACTTTATGAATAATAGTCAAGTGTATAACAACATTGTTAGAAAAGTGCAGCTATAGCAAAATCGCTAATAGACTTTTATGGTCTATGAATGGTAGATTTTGACAGATTTTTATATATTTGTACTTTTTAAGAAAATGTTCTTAAATAATCGCTATATTTGCAATCATATCAGAAGATTTTTACCTCGAAAAAAAGGAAATGATAAGATAGAAAGGTAACAGTAGTACTAGTATTCTGGTCATAGGACTGAAGTGTTATCTCTTCTAACACTATAAAGAAAGTTTTCAATATTCCATATTCCATATTCGTTATTGTAGCAGCTGAATATTTCTCATTAGGCATCAACTCCACCTAGATAATGGGTTGACTCTAGTTTTCAAGCACTTAGTTTGGCCATTGATGTTTAATGCAAATTTATCACTTTTCTTGACGAACAAGGCTCCATCTTCTAGAAGAGGAAAAAGAAAGAAAGGTTTATACTCAAAGATTGTGTTATTTAGGTGATGGAAGGAAGAATCACCATGGCCACTTTCCTCGAGGTGCTTGTTGAGTTGGCATCTTGTTCATTGTTATTAATTTTTTATATCTATCAATGTTCGGATCAGTTTACACGTATTTCAATTAATCTCCTTGAATAACCCACCTGATTCTACAACGTATGAACGTCAAGAAAATTCATAGGAAATTAATTATTAGGTGGGTGATCATCATCGAATGAAACCATGATTTTGAAACCATACCTCCCTTTTAACTCCTAGACCAACCATGATGGTTAGCATCTTGTTCGTTATCTTGGGCAATGCACACTTTAAAATACCCTTGCTAGGAAAGTTGTCGCGTCTCAATTTTAGAAAATTGTTGATAAAAACGTTTAAAAATATTAGAAAAACTAAAAAGAATTAAAAACCAAAATATGTGGATTAATAGATAACTATGTTGCTTTTTCTAAATAAGTTAGGAATGACGGTAATTTATATTATAAATAAGTTTTGAATCTAGTTTCTATTTGGTTTTTATGTTTCAAAATGTTATTACGTTTAGTACTTAAGTTTCGAGCTTTGTTTGAATATCATAATTTTAACTTTGAGATTTAAGTTTTCTTCTAATTTGATCCTTTAGTTTCGATGTTCACACTTTTAACCCCAAATTTTTGTTAAATAATTCACTTTTAATCTATTAATTATTTTCAAAATAATTGGCAAGTGAAATTTTGAATTAAGACATAAATGAGTATTTAATAAAAACAAAATACTTAAGCGATCAAAACAAAACTTAAAAGAGTGAAATTGCAAGTCTTAGATTGAAATTTGGTTCAAAACTTAAAAAGATTGGAAGAGTAAAAAGAATAACATTTAAAATTTACAGCCAAATAGAAAATAGCTCTAAATCCAAATTTCTATTCTTTTTGCTTTTTCTTTTGTTCAGTTTCTGTTTCTGAATTGATACATATAAATATGAATGAAAATGTTTAGACATATAATGAGAGAATTATAAGATGATAGAATGGTTGTTAAAGTTGCACAATGGCTTTACTCATATGCTCTAACATTTGAATATTCTCACTTTTGTAGACTCTCCTCTACTTTTTACTTCCCACTGCTAATGTAGTAAGCAGCTTACGGAATCTTTCTTTCTAATAAATCACAAAAAGAAAAAAGAAAAAAGAGAAACTGCGAGTCTATATGGTTAATTATTAAATGGATAATTTAGCGAAAACATGAGTGGGATTACAATGATTTTGATTTTGATTTTGATTTTGACTTCTCTCTTTGCTTTTTGTCTTTCGATTAACAGATGGATTGATGAAATATTGGGTGGTTTCTTTAATTTGCTGAGTTCGTCACGCCTCAATTATTTACCAACACCCATACATAACCCATAACCACACAGTGCCAAAAAGGATGAGGACAACCAACGCAAAAAGGCCAACACCATCTATTAAGGTTCTTTGTTTTTTTTTCTTTTCTTCTTCTTTGGCATAAAGTCTAGTTTTGATAAATATATATATATAATACATTACATCGAAGATAGTTTCTTTCATTTAAAATTAGTCCTCAAAAGTTAAATTTACATCAAGTTGAGTAAAATGCATATAACCCAAACTTGAATTTGTATCCCTTTATACAAATCACCAATCATAGATGGATCCCTTTTTTTATTTTTGAGCTAATGGTTCAAAATATCATTTCAGTCTTTGTATTATTTTAGATTTCTTAGTTTTTTTAGTTAGAGATTATTTTAGATTTCTTAGTTTTTTAGTTAGAGATTATTTTAGATTTCTTAGTTTTTTTAGTTAGAGATAGTTGCACTGATAATTAGATTT

mRNA sequence

CCTCAAATTTTTGTCATGTAGTGATTTTTGTTGGTATAAATGGTTTGATTTTTTTTAATTTCTTGAAAAAAGTATCATTCTTATTTGTGTAAATGACGATAATGGAAAAGTAATAGAGTCCCCTTGTGCCACGTATGCAAAAGTTAATTCCTCTTTTAATAAGAATACAAATTATATTTTTTAGAAAAAAGAAAAATATTACCTAAATTTAAACTGCGAAACAACACTGCCCATAAGAGACAAAAATGTGAAATAGAAACAGCGATAAATACCAATGAGAAAACTCCGAGCTTCTCTTCTTCTTGCCTGATCTAACCATTTCAACTCCATCGCGGGAATCTCTGAGCTCTCTCTCTCTCTCTCTCTATCTATCTCTTTCTTCTAGACATAGCCACCGGAAACAATGGCGTCGTCGACGGCTAAGATTACGTTTCGTGTTATCATGGTGGTGATCCTCCTCCTCGTCTTGTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCTACTGTACATGATATTCGTCAGAACAAACAGACCGTCAAAGAAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCATGATGAGTCGGACTCGGGCGTTCATGATGGAAATGATGGAAAGAAAGCCGGATCGGGTGCTATTCGGAGGCTGCTTCATCAGATGGATTGATGAAATATTGGGTGGTTTCTTTAATTTGCTGAGTTCGTCACGCCTCAATTATTTACCAACACCCATACATAACCCATAACCACACAGTGCCAAAAAGGATGAGGACAACCAACGCAAAAAGGCCAACACCATCTATTAAGGTTCTTTGTTTTTTTTTCTTTTCTTCTTCTTTGGCATAAAGTCTAGTTTTGATAAATATATATATATAATACATTACATCGAAGATAGTTTCTTTCATTTAAAATTAGTCCTCAAAAGTTAAATTTACATCAAGTTGAGTAAAATGCATATAACCCAAACTTGAATTTGTATCCCTTTATACAAATCACCAATCATAGATGGATCCCTTTTTTTATTTTTGAGCTAATGGTTCAAAATATCATTTCAGTCTTTGTATTATTTTAGATTTCTTAGTTTTTTTAGTTAGAGATTATTTTAGATTTCTTAGTTTTTTAGTTAGAGATTATTTTAGATTTCTTAGTTTTTTTAGTTAGAGATAGTTGCACTGATAATTAGATTT

Coding sequence (CDS)

ATGGCGTCGTCGACGGCTAAGATTACGTTTCGTGTTATCATGGTGGTGATCCTCCTCCTCGTCTTGTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCTACTGTACATGATATTCGTCAGAACAAACAGACCGTCAAAGAAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCATGATGAGTCGGACTCGGGCGTTCATGATGGAAATGATGGAAAGAAAGCCGGATCGGGTGCTATTCGGAGGCTGCTTCATCAGATGGATTGA

Protein sequence

MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQMD
Homology
[Close]
BLAST of CsGy6G005210 vs. NCBI nr
Match: XP_011656653.1 (PREDICTED: uncharacterized protein LOC101217077 isoform X3 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-44
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK
Sbjct: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQMD 96
          SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQMD
Sbjct: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQMD 95

[Close]
BLAST of CsGy6G005210 vs. NCBI nr
Match: KGN46179.1 (hypothetical protein Csa_6G067370 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 4.9e-43
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK
Sbjct: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQM 95
          SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQ+
Sbjct: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQV 94

[Close]
BLAST of CsGy6G005210 vs. NCBI nr
Match: XP_011656651.1 (PREDICTED: uncharacterized protein LOC101217077 isoform X1 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 8.3e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK
Sbjct: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQ 94
          SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQ
Sbjct: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQ 93

[Close]
BLAST of CsGy6G005210 vs. NCBI nr
Match: XP_011656652.1 (PREDICTED: uncharacterized protein LOC101217077 isoform X2 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 8.3e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK
Sbjct: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQ 94
          SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQ
Sbjct: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQ 93

[Close]
BLAST of CsGy6G005210 vs. NCBI nr
Match: XP_008458516.1 (PREDICTED: uncharacterized protein LOC103497900 isoform X2 [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 4.1e-42
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK
Sbjct: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQMD 96
          SVGWYHDESDSGV DGNDGKKAGS AIRRLLHQMD
Sbjct: 61 SVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQMD 95

[Close]
BLAST of CsGy6G005210 vs. TAIR10
Match: AT5G18850.1 (unknown protein)

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-28
Identity = 60/94 (63.83%), Postives = 77/94 (81.91%), Query Frame = 0 

Query: 2  ASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKS 61
          +S T +I FR ++++ L++VLFYVGRPLYWKISAT+HDIR NKQ+V+EG+SQIV EAQ+S
Sbjct: 6  SSPTTRIWFRTVILIALMVVLFYVGRPLYWKISATIHDIRHNKQSVREGISQIVHEAQRS 65

Query: 62 VGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQMD 96
          VGWYHDESDSG  +G++ KK+G    RRLL   D
Sbjct: 66 VGWYHDESDSGFREGHN-KKSGIAVSRRLLFAGD 98

[Close]
BLAST of CsGy6G005210 vs. TrEMBL
Match: tr|A0A0A0KBE9|A0A0A0KBE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067370 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.2e-43
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK
Sbjct: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQM 95
          SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQ+
Sbjct: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQV 94

[Close]
BLAST of CsGy6G005210 vs. TrEMBL
Match: tr|A0A1S3C7I8|A0A1S3C7I8_CUCME (uncharacterized protein LOC103497900 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497900 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-42
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK
Sbjct: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQMD 96
          SVGWYHDESDSGV DGNDGKKAGS AIRRLLHQMD
Sbjct: 61 SVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQMD 95

[Close]
BLAST of CsGy6G005210 vs. TrEMBL
Match: tr|A0A1S3C994|A0A1S3C994_CUCME (uncharacterized protein LOC103497900 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497900 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.0e-41
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK
Sbjct: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGNDGKKAGSGAIRRLLHQM 95
          SVGWYHDESDSGV DGNDGKKAGS AIRRLLHQ+
Sbjct: 61 SVGWYHDESDSGVQDGNDGKKAGSVAIRRLLHQV 94

[Close]
BLAST of CsGy6G005210 vs. TrEMBL
Match: tr|A0A2P5FX71|A0A2P5FX71_9ROSA (Low-density receptor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_021490 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-32
Identity = 74/98 (75.51%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAK+TFR+ MVV++ LVLFYVGRPLYWKISAT+HDIRQNKQTVK+G+SQIV+EAQ+
Sbjct: 1  MASSTAKVTFRIAMVVLVFLVLFYVGRPLYWKISATIHDIRQNKQTVKQGISQIVMEAQR 60

Query: 61 SVGWYHDESDSGVHDGND--GKKAGSGAIRRL--LHQM 95
          +VGWYHDESDSGVHD     GKKAGS   R+L  LHQ+
Sbjct: 61 TVGWYHDESDSGVHDHESRVGKKAGSATNRKLMMLHQV 98

[Close]
BLAST of CsGy6G005210 vs. TrEMBL
Match: tr|A0A2P5E3Y7|A0A2P5E3Y7_PARAD (Low-density receptor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_007030 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-32
Identity = 74/98 (75.51%), Postives = 86/98 (87.76%), Query Frame = 0 

Query: 1  MASSTAKITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQK 60
          MASSTAK+TFR+ MVV++ LVLFYVGRPLYWKISAT+HDIRQNKQTVK+G+SQIV+EAQ+
Sbjct: 1  MASSTAKVTFRIAMVVLVFLVLFYVGRPLYWKISATIHDIRQNKQTVKQGISQIVMEAQR 60

Query: 61 SVGWYHDESDSGVHDGND--GKKAGSGAIRRL--LHQM 95
          +VGWYHDESDSGVHD     GKKAGS   R+L  LHQ+
Sbjct: 61 TVGWYHDESDSGVHDHESGVGKKAGSATNRKLMMLHQV 98

The following BLAST results are available for this feature:
BLAST of CsGy6G005210 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656653.14.4e-44100.00PREDICTED: uncharacterized protein LOC101217077 isoform X3 [Cucumis sativus][more]
KGN46179.14.9e-4398.94hypothetical protein Csa_6G067370 [Cucumis sativus][more]
XP_011656651.18.3e-43100.00PREDICTED: uncharacterized protein LOC101217077 isoform X1 [Cucumis sativus][more]
XP_011656652.18.3e-43100.00PREDICTED: uncharacterized protein LOC101217077 isoform X2 [Cucumis sativus][more]
XP_008458516.14.1e-4297.89PREDICTED: uncharacterized protein LOC103497900 isoform X2 [Cucumis melo][more]
BLAST of CsGy6G005210 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18850.11.4e-2863.83unknown protein[more]
BLAST of CsGy6G005210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G005210 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KBE9|A0A0A0KBE9_CUCSA3.2e-4398.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067370 PE=4 SV=1[more]
tr|A0A1S3C7I8|A0A1S3C7I8_CUCME2.7e-4297.89uncharacterized protein LOC103497900 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3C994|A0A1S3C994_CUCME3.0e-4196.81uncharacterized protein LOC103497900 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2P5FX71|A0A2P5FX71_9ROSA4.4e-3275.51Low-density receptor-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_021... [more]
tr|A0A2P5E3Y7|A0A2P5E3Y7_PARAD4.4e-3275.51Low-density receptor-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G005210.1CsGy6G005210.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G005210CmaCh08G011920Cucurbita maxima (Rimu)cgybcmaB865
CsGy6G005210Lsi09G013820Bottle gourd (USVL1VR-Ls)cgyblsiB361
CsGy6G005210Bhi12G001570Wax gourdcgybwgoB523
CsGy6G005210Carg05474Silver-seed gourdcarcgybB0075
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G005210Cucumber (Gy14) v2cgybcgybB104
CsGy6G005210Cucurbita maxima (Rimu)cgybcmaB739
CsGy6G005210Cucurbita maxima (Rimu)cgybcmaB754
CsGy6G005210Cucurbita moschata (Rifu)cgybcmoB719
CsGy6G005210Cucurbita moschata (Rifu)cgybcmoB736
CsGy6G005210Cucurbita moschata (Rifu)cgybcmoB847
CsGy6G005210Cucurbita moschata (Rifu)cgybcmoB839
CsGy6G005210Cucurbita pepo (Zucchini)cgybcpeB724
CsGy6G005210Cucurbita pepo (Zucchini)cgybcpeB786
CsGy6G005210Cucurbita pepo (Zucchini)cgybcpeB836
CsGy6G005210Cucurbita pepo (Zucchini)cgybcpeB894
CsGy6G005210Cucumber (Chinese Long) v2cgybcuB258
CsGy6G005210Cucumber (Chinese Long) v2cgybcuB282
CsGy6G005210Bottle gourd (USVL1VR-Ls)cgyblsiB428
CsGy6G005210Melon (DHL92) v3.5.1cgybmeB369
CsGy6G005210Melon (DHL92) v3.5.1cgybmeB437
CsGy6G005210Melon (DHL92) v3.6.1cgybmedB370
CsGy6G005210Melon (DHL92) v3.6.1cgybmedB431
CsGy6G005210Watermelon (Charleston Gray)cgybwcgB433
CsGy6G005210Watermelon (Charleston Gray)cgybwcgB444
CsGy6G005210Watermelon (97103) v1cgybwmB461
CsGy6G005210Watermelon (97103) v1cgybwmB510
CsGy6G005210Wild cucumber (PI 183967)cgybcpiB266
CsGy6G005210Wild cucumber (PI 183967)cgybcpiB288
CsGy6G005210Silver-seed gourdcarcgybB0334
CsGy6G005210Silver-seed gourdcarcgybB0606
CsGy6G005210Cucumber (Chinese Long) v3cgybcucB271
CsGy6G005210Cucumber (Chinese Long) v3cgybcucB298
CsGy6G005210Watermelon (97103) v2cgybwmbB438
CsGy6G005210Watermelon (97103) v2cgybwmbB452
CsGy6G005210Wax gourdcgybwgoB532