CsGy6G001440 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGTTGTTTGTTTAGGTTGATGACATATGGCATTAGGGTTACACAGAAGGACAAATGTGTCCAACTACTGTCCCCCTCCCCCCTCTTCCTTTCCAGTTGTCTTCACTTTCTTATTAAAAACCCTTTCTCTCTCAAATCCCAAATAATCAAACCTTAATAAGCCCACACACACACACATACATTCTTCCTTCTTACCATTCCCATACCCCTTTCTTCACTGTCCCTTTTCCTTTTATCCCTTCATTTGTAGGGTCCTTTCTCCCACTACTCTCCCTTTACCTTCATTATTAAATCCTCCTCTCTCCCCCTCTTCATTTCCCCAACTTCTTCTCTTTTCCCCCCTTTTCTCCTCTCCCATGGCTGCTCCCACTTTGACCTTCCCTACTGAGTTTCCTTATGATTTTGACTCCTTTCTCTCTAACTGCGACCTCAACTCGCCTGTTGAATCGGTTGGCAGCTCCACTACAGATTCCACTGATAGCTGTGGTAGCGATGATGATGAGTTCTTTGTTGGGTTGGCCCAGAAACTTGCATGGACGTCCCTTTGTGAAGCTGAAAACACATTTGAGGTACCCTTTGATGAAATCTTTCAATTCTTGGTACTTGCTGTCTTTTAGGTGTTTGGATTGGTTGGTTTCTGATTTTGCTCTTTTGGTGTTTTATTAGAAGAAGTATGTTAAAGCTGGCTCTCCTCAGTCGACTTTGAGTGGAATAGATACCTGGTTTCGTCCTGAAAGTCCTTCCTCTCAGTTGAAATCGCCTCCCATGGCGGTTTTTGGGGCTGAGAATGATGCTAGAGCGATTCTACATGCAGCTGCTAGAGAAGCTGCGAAGTTGAAGATGAGTGGCGAAACAACCCCATTTCAGAATAATGACCCTTTTATGAGAGGATTTGTAGGTGCTCGATCTTCTGTTCCAGTTAAATCTACTAATAATGTGGATTATGGTGTTTTCTCAACTCAGAACTCTGCTCGGAATCTTGCATTTGCCGCGCAGGTTAATTATTTTTGAATGTTCAAACCCTTTCACCTGCTGAATCTCTTAGAACAGAGTATTTTAATGGGTCCCTGTTCTGAGTTATGGTTTGTCTTCCATTTCTGAGATTTTTTGTTCTATAGGTGCAGCAAGTGAAGCAAGATCTTGTACTACAGGCTCTCCGTGCCTCCTCTTTGGGAGGAAGACAAGCCAAAGCCAGCTGGTCGGCTCAGCCACACTGGAAGCAGGAGATTCAAAACAGAGAAAGAAATGTTGTAAATGCAAGTGGCCGGTGCGGTGGAGGCACCGGCGGTTTGTACCATTCCCCATGGCTTCCGCCGCTGCAAAATCAACAACCAACATCTAACCCCACCGTCGTGCGTTGCATTCATCCCGTCAGATCCGGCGTGAAAAGAGCTTCCTCCGGCACCGGCGTTTTCTTGCCTCGTAGGTACATCAACCCTTCCGAATGCCGCCAGAAACAGGGTATTTCACAACCTTCATTCATCTGAAAAATCACATGGGTTTCTTTAATTAAACTTCGTAATCATCATTTTCCTTCTTAATTAGGAATCCCATCCGTTCGATTTGTGGAGGAGATGAAAAGCCCCATTCAAGCTCCACTAAACGGTTGCCATTCCCCTGGCTTCGGTAAGGAAGAGTTTCCCTTGATTTTTTCACCACATTCCCAAAATTTATGATTGTTGTAATGGGTTTCTTTAATGAACTTTACAAATTACAGATCCCATTTTATCAAGAAGAAACAATCCCCTTCTGCCATTGCCAAGGAGTTTCCGAACAGAGGGAGTCATGAATCAAGAACATCATCATCTACCTCAGGAATGGACATATTGATGTTGGAGAAACAGAGAGAAACTAGAGATGGAAATTGTTTTGTAGGATTTGGATAAAGAAGCCATTTAAGTAGGCAATTAGTAGCATTAATTTATGAAAGAAGAAGAAAATGAAGAAGTGGGGAGATTCAAAAGGAAGTTTCTTTTTTTTTGTTAGATTT GGGTTGTTTGTTTAGGTTGATGACATATGGCATTAGGGTTACACAGAAGGACAAATGTGTCCAACTACTGTCCCCCTCCCCCCTCTTCCTTTCCAGTTGTCTTCACTTTCTTATTAAAAACCCTTTCTCTCTCAAATCCCAAATAATCAAACCTTAATAAGCCCACACACACACACATACATTCTTCCTTCTTACCATTCCCATACCCCTTTCTTCACTGTCCCTTTTCCTTTTATCCCTTCATTTGTAGGGTCCTTTCTCCCACTACTCTCCCTTTACCTTCATTATTAAATCCTCCTCTCTCCCCCTCTTCATTTCCCCAACTTCTTCTCTTTTCCCCCCTTTTCTCCTCTCCCATGGCTGCTCCCACTTTGACCTTCCCTACTGAGTTTCCTTATGATTTTGACTCCTTTCTCTCTAACTGCGACCTCAACTCGCCTGTTGAATCGGTTGGCAGCTCCACTACAGATTCCACTGATAGCTGTGGTAGCGATGATGATGAGTTCTTTGTTGGGTTGGCCCAGAAACTTGCATGGACGTCCCTTTGTGAAGCTGAAAACACATTTGAGAAGAAGTATGTTAAAGCTGGCTCTCCTCAGTCGACTTTGAGTGGAATAGATACCTGGTTTCGTCCTGAAAGTCCTTCCTCTCAGTTGAAATCGCCTCCCATGGCGGTTTTTGGGGCTGAGAATGATGCTAGAGCGATTCTACATGCAGCTGCTAGAGAAGCTGCGAAGTTGAAGATGAGTGGCGAAACAACCCCATTTCAGAATAATGACCCTTTTATGAGAGGATTTGTAGGTGCTCGATCTTCTGTTCCAGTTAAATCTACTAATAATGTGGATTATGGTGTTTTCTCAACTCAGAACTCTGCTCGGAATCTTGCATTTGCCGCGCAGGTGCAGCAAGTGAAGCAAGATCTTGTACTACAGGCTCTCCGTGCCTCCTCTTTGGGAGGAAGACAAGCCAAAGCCAGCTGGTCGGCTCAGCCACACTGGAAGCAGGAGATTCAAAACAGAGAAAGAAATGTTGTAAATGCAAGTGGCCGGTGCGGTGGAGGCACCGGCGGTTTGTACCATTCCCCATGGCTTCCGCCGCTGCAAAATCAACAACCAACATCTAACCCCACCGTCGTGCGTTGCATTCATCCCGTCAGATCCGGCGTGAAAAGAGCTTCCTCCGGCACCGGCGTTTTCTTGCCTCGTAGGTACATCAACCCTTCCGAATGCCGCCAGAAACAGGGAATCCCATCCGTTCGATTTGTGGAGGAGATGAAAAGCCCCATTCAAGCTCCACTAAACGGTTGCCATTCCCCTGGCTTCGGTAAGGAAGAATCCCATTTTATCAAGAAGAAACAATCCCCTTCTGCCATTGCCAAGGAGTTTCCGAACAGAGGGAGTCATGAATCAAGAACATCATCATCTACCTCAGGAATGGACATATTGATGTTGGAGAAACAGAGAGAAACTAGAGATGGAAATTGTTTTGTAGGATTTGGATAAAGAAGCCATTTAAGTAGGCAATTAGTAGCATTAATTTATGAAAGAAGAAGAAAATGAAGAAGTGGGGAGATTCAAAAGGAAGTTTCTTTTTTTTTGTTAGATTT ATGGCTGCTCCCACTTTGACCTTCCCTACTGAGTTTCCTTATGATTTTGACTCCTTTCTCTCTAACTGCGACCTCAACTCGCCTGTTGAATCGGTTGGCAGCTCCACTACAGATTCCACTGATAGCTGTGGTAGCGATGATGATGAGTTCTTTGTTGGGTTGGCCCAGAAACTTGCATGGACGTCCCTTTGTGAAGCTGAAAACACATTTGAGAAGAAGTATGTTAAAGCTGGCTCTCCTCAGTCGACTTTGAGTGGAATAGATACCTGGTTTCGTCCTGAAAGTCCTTCCTCTCAGTTGAAATCGCCTCCCATGGCGGTTTTTGGGGCTGAGAATGATGCTAGAGCGATTCTACATGCAGCTGCTAGAGAAGCTGCGAAGTTGAAGATGAGTGGCGAAACAACCCCATTTCAGAATAATGACCCTTTTATGAGAGGATTTGTAGGTGCTCGATCTTCTGTTCCAGTTAAATCTACTAATAATGTGGATTATGGTGTTTTCTCAACTCAGAACTCTGCTCGGAATCTTGCATTTGCCGCGCAGGTGCAGCAAGTGAAGCAAGATCTTGTACTACAGGCTCTCCGTGCCTCCTCTTTGGGAGGAAGACAAGCCAAAGCCAGCTGGTCGGCTCAGCCACACTGGAAGCAGGAGATTCAAAACAGAGAAAGAAATGTTGTAAATGCAAGTGGCCGGTGCGGTGGAGGCACCGGCGGTTTGTACCATTCCCCATGGCTTCCGCCGCTGCAAAATCAACAACCAACATCTAACCCCACCGTCGTGCGTTGCATTCATCCCGTCAGATCCGGCGTGAAAAGAGCTTCCTCCGGCACCGGCGTTTTCTTGCCTCGTAGGTACATCAACCCTTCCGAATGCCGCCAGAAACAGGGAATCCCATCCGTTCGATTTGTGGAGGAGATGAAAAGCCCCATTCAAGCTCCACTAAACGGTTGCCATTCCCCTGGCTTCGGTAAGGAAGAATCCCATTTTATCAAGAAGAAACAATCCCCTTCTGCCATTGCCAAGGAGTTTCCGAACAGAGGGAGTCATGAATCAAGAACATCATCATCTACCTCAGGAATGGACATATTGATGTTGGAGAAACAGAGAGAAACTAGAGATGGAAATTGTTTTGTAGGATTTGGATAA MAAPTLTFPTEFPYDFDSFLSNCDLNSPVESVGSSTTDSTDSCGSDDDEFFVGLAQKLAWTSLCEAENTFEKKYVKAGSPQSTLSGIDTWFRPESPSSQLKSPPMAVFGAENDARAILHAAAREAAKLKMSGETTPFQNNDPFMRGFVGARSSVPVKSTNNVDYGVFSTQNSARNLAFAAQVQQVKQDLVLQALRASSLGGRQAKASWSAQPHWKQEIQNRERNVVNASGRCGGGTGGLYHSPWLPPLQNQQPTSNPTVVRCIHPVRSGVKRASSGTGVFLPRRYINPSECRQKQGIPSVRFVEEMKSPIQAPLNGCHSPGFGKEESHFIKKKQSPSAIAKEFPNRGSHESRTSSSTSGMDILMLEKQRETRDGNCFVGFG
BLAST of CsGy6G001440 vs. NCBI nr
Match: XP_004138440.2 (PREDICTED: uncharacterized protein LOC101208139 [Cucumis sativus] >KGN45759.1 hypothetical protein Csa_6G009380 [Cucumis sativus]) HSP 1 Score: 648.3 bits (1671), Expect = 1.6e-182 Identity = 320/322 (99.38%), Postives = 320/322 (99.38%), Query Frame = 0
BLAST of CsGy6G001440 vs. NCBI nr
Match: XP_008441420.1 (PREDICTED: uncharacterized protein LOC103485542 [Cucumis melo]) HSP 1 Score: 620.5 bits (1599), Expect = 3.7e-174 Identity = 306/322 (95.03%), Postives = 312/322 (96.89%), Query Frame = 0
BLAST of CsGy6G001440 vs. NCBI nr
Match: XP_022134429.1 (uncharacterized protein LOC111006679 [Momordica charantia]) HSP 1 Score: 429.9 bits (1104), Expect = 9.2e-117 Identity = 224/327 (68.50%), Postives = 249/327 (76.15%), Query Frame = 0
BLAST of CsGy6G001440 vs. NCBI nr
Match: XP_022957513.1 (uncharacterized protein LOC111458886 [Cucurbita moschata]) HSP 1 Score: 428.7 bits (1101), Expect = 2.1e-116 Identity = 223/342 (65.20%), Postives = 259/342 (75.73%), Query Frame = 0
BLAST of CsGy6G001440 vs. NCBI nr
Match: XP_023515357.1 (uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 428.7 bits (1101), Expect = 2.1e-116 Identity = 222/342 (64.91%), Postives = 260/342 (76.02%), Query Frame = 0
BLAST of CsGy6G001440 vs. TAIR10
Match: AT2G39870.1 (unknown protein) HSP 1 Score: 63.9 bits (154), Expect = 2.4e-10 Identity = 78/274 (28.47%), Postives = 105/274 (38.32%), Query Frame = 0
BLAST of CsGy6G001440 vs. TAIR10
Match: AT3G55690.1 (unknown protein) HSP 1 Score: 48.9 bits (115), Expect = 8.0e-06 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of CsGy6G001440 vs. TrEMBL
Match: tr|A0A0A0KA94|A0A0A0KA94_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009380 PE=4 SV=1) HSP 1 Score: 648.3 bits (1671), Expect = 1.1e-182 Identity = 320/322 (99.38%), Postives = 320/322 (99.38%), Query Frame = 0
BLAST of CsGy6G001440 vs. TrEMBL
Match: tr|A0A1S3B425|A0A1S3B425_CUCME (uncharacterized protein LOC103485542 OS=Cucumis melo OX=3656 GN=LOC103485542 PE=4 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 2.4e-174 Identity = 306/322 (95.03%), Postives = 312/322 (96.89%), Query Frame = 0
BLAST of CsGy6G001440 vs. TrEMBL
Match: tr|A0A2P5EQ56|A0A2P5EQ56_9ROSA (TIP41-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_166080 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 8.7e-47 Identity = 142/353 (40.23%), Postives = 192/353 (54.39%), Query Frame = 0
BLAST of CsGy6G001440 vs. TrEMBL
Match: tr|A0A2I4ER61|A0A2I4ER61_9ROSI (uncharacterized protein LOC108991912 OS=Juglans regia OX=51240 GN=LOC108991912 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43 Identity = 128/322 (39.75%), Postives = 180/322 (55.90%), Query Frame = 0
BLAST of CsGy6G001440 vs. TrEMBL
Match: tr|A0A2I4HNK0|A0A2I4HNK0_9ROSI (uncharacterized protein LOC109019813 isoform X1 OS=Juglans regia OX=51240 GN=LOC109019813 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43 Identity = 129/321 (40.19%), Postives = 177/321 (55.14%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |