Carg06001 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06001
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	TIP41-like protein
Location	Cucurbita_argyrosperma_scaffold_026 : 621511 .. 622668 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTGCCTTACATATCTGAGATTATTGAGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCCGCTTGGGAAAGACAAGCCATGGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGACATTCAAAACAGAGAGAGAAACATCGTTAATGTTACCAGCCGGTGCGTTGGAGGCACCGGTAGTTTGTACCACTCTCCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCAACCCGCCGGCGGATCTGCCATCAAAAGGGCTTCCTCCGGAACCGGCGTTTTCCTCCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTATTTTGACCTAAAACGATCTCAAAACGTCCCTGGTCTAAAAGACACATGGATTATCTTTCTCTAACCTTCGTCGTTATGATTAATTAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATTCAAGCCCCATTCAACGGCTGGCTGTCATCCAGCATCGGTAAGCAAGTATCTCCAACAATTACCCCCTAATTTGTCATCGTTTTAAAGCAATTCTTTAAATGGGAGTTTCACAAATTACAGATTCCAGAAAGAATCCCCTTCTGCCACTGCCGCCAAGGAGCATCCGAGCAGAGGGAGCCGTAAAACAAGAACTTCACCTACCTCAAGAATGGACATACTGATGAAGAACGAAGCAGAGAACACTGAATCCATTTGTTTTTGCAGGTGTTGGATAAAGAATCCATTAAAGTAGCCAGAACAATATTAATTTATGCAGAAGGGTGATCTTGGACGAAGAGAATGAAAAGGGTGTTCTTAGTTAGATTGAAAATGGCAGTATAGGTTTAGAATAAAGAAGGAAGGGTTGCAGTGGGTGAAGGAAGAAGATGAAGAGGTTGAGAAGAAAAGGACAGGACAGAGATATGTTGTGTCCTACTAATAATAAATCTGTAATTTTGTGCCATAGTGATTTTAGATTTATGTTTTTTTTTTGGGTGAGGGCAAAATTATAAAAAATCCCTCTCTGCCTTGTAATTTTGTTCAATTGTTAATCATATGCTTTAATAAATAATAACATATATTTGATGTGTTCAA

mRNA sequence

ATGGCCTGCCTTACATATCTGAGATTATTGAGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCCGCTTGGGAAAGACAAGCCATGGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGACATTCAAAACAGAGAGAGAAACATCGTTAATGTTACCAGCCGGTGCGTTGGAGGCACCGGTAGTTTGTACCACTCTCCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCAACCCGCCGGCGGATCTGCCATCAAAAGGGCTTCCTCCGGAACCGGCGTTTTCCTCCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATTCAAGCCCCATTCAACGGCTGGCTGTCATCCAGCATCGATTCCAGAAAGAATCCCCTTCTGCCACTGCCGCCAAGGAGCATCCGAGCAGAGGGAGCCGTAAAACAAGAACTTCACCTACCTCAAGAATGGACATACTGATGAAGAACGAAGCAGAGAACACTGAATCCATTTGTTTTTGCAGGTGTTGGATAAAGAATCCATTAAAGTAGCCAGAACAATATTAATTTATGCAGAAGGGTGATCTTGGACGAAGAGAATGAAAAGGGTGTTCTTAGTTAGATTGAAAATGGCAGTATAGGTTTAGAATAAAGAAGGAAGGGTTGCAGTGGGTGAAGGAAGAAGATGAAGAGGTTGAGAAGAAAAGGACAGGACAGAGATATGTTGTGTCCTACTAATAATAAATCTGTAATTTTGTGCCATAGTGATTTTAGATTTATGTTTTTTTTTTGGGTGAGGGCAAAATTATAAAAAATCCCTCTCTGCCTTGTAATTTTGTTCAATTGTTAATCATATGCTTTAATAAATAATAACATATATTTGATGTGTTCAA

Coding sequence (CDS)

ATGGCCTGCCTTACATATCTGAGATTATTGAGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCCGCTTGGGAAAGACAAGCCATGGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGACATTCAAAACAGAGAGAGAAACATCGTTAATGTTACCAGCCGGTGCGTTGGAGGCACCGGTAGTTTGTACCACTCTCCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCAACCCGCCGGCGGATCTGCCATCAAAAGGGCTTCCTCCGGAACCGGCGTTTTCCTCCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATTCAAGCCCCATTCAACGGCTGGCTGTCATCCAGCATCGATTCCAGAAAGAATCCCCTTCTGCCACTGCCGCCAAGGAGCATCCGAGCAGAGGGAGCCGTAAAACAAGAACTTCACCTACCTCAAGAATGGACATACTGA

Protein sequence

MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY

Homology

[Close]

BLAST of Carg06001 vs. NCBI nr
Match: XP_022957513.1 (uncharacterized protein LOC111458886 [Cucurbita moschata])

HSP 1 Score: 350.1 bits (897), Expect = 4.6e-93
Identity = 169/175 (96.57%), Postives = 170/175 (97.14%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
           QVQKVGQDLVLQALRASAWERQA VGW AQPHRKPDIQ+RERNIVNVTSRCVGGTGSLYH
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAKVGWLAQPHRKPDIQSRERNIVNVTSRCVGGTGSLYH 266

Query: 76  SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 135
           SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI
Sbjct: 267 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 326

Query: 136 NFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
           NFTEEMKSSIQAPFN WLSSS DSRKNPLLPL PRSIRAEGAVKQELHLPQEWTY
Sbjct: 327 NFTEEMKSSIQAPFNAWLSSSFDSRKNPLLPL-PRSIRAEGAVKQELHLPQEWTY 380

[Close]

BLAST of Carg06001 vs. NCBI nr
Match: XP_023515357.1 (uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.5 bits (872), Expect = 3.7e-90
Identity = 164/175 (93.71%), Postives = 167/175 (95.43%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
           QVQKVGQDLVLQALRASAWERQA VGWSAQPHRKP+IQNRERNIV+VTSRC GGTGSLYH
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAKVGWSAQPHRKPEIQNRERNIVDVTSRCSGGTGSLYH 266

Query: 76  SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 135
           S WIPPHQNQHPPPNASAMRCI PAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI
Sbjct: 267 SAWIPPHQNQHPPPNASAMRCIHPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 326

Query: 136 NFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
           NFTEEMKSSIQAPFNGWLSSS DSRKNPLLP  PR+IRAEGAVK ELHLPQEWTY
Sbjct: 327 NFTEEMKSSIQAPFNGWLSSSFDSRKNPLLP-QPRTIRAEGAVKHELHLPQEWTY 380

[Close]

BLAST of Carg06001 vs. NCBI nr
Match: XP_022990003.1 (uncharacterized protein LOC111487028 isoform X2 [Cucurbita maxima])

HSP 1 Score: 330.1 bits (845), Expect = 5.0e-87
Identity = 161/176 (91.48%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
           QVQKVGQDLVLQALRASAWERQA VGWSAQPHRK +IQNRERNIVNVTSR  GGTGSL H
Sbjct: 206 QVQKVGQDLVLQALRASAWERQAKVGWSAQPHRKSEIQNRERNIVNVTSRSGGGTGSLNH 265

Query: 76  SPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
            PWI PPHQ+QHPPPNASAMRCI PAGGSAIKRASSGTGVFLPRRHVNPS+CRHKQGSPA
Sbjct: 266 CPWIPPPHQSQHPPPNASAMRCIHPAGGSAIKRASSGTGVFLPRRHVNPSECRHKQGSPA 325

Query: 136 INFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
           INFTEEMKSS QAPFNGWLSSS+DSRKNPLLPLP  SIRAEGAVKQELHLPQEWTY
Sbjct: 326 INFTEEMKSSNQAPFNGWLSSSVDSRKNPLLPLPRSSIRAEGAVKQELHLPQEWTY 381

[Close]

BLAST of Carg06001 vs. NCBI nr
Match: XP_022990001.1 (uncharacterized protein LOC111487028 isoform X1 [Cucurbita maxima])

HSP 1 Score: 330.1 bits (845), Expect = 5.0e-87
Identity = 161/176 (91.48%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
           QVQKVGQDLVLQALRASAWERQA VGWSAQPHRK +IQNRERNIVNVTSR  GGTGSL H
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAKVGWSAQPHRKSEIQNRERNIVNVTSRSGGGTGSLNH 266

Query: 76  SPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
            PWI PPHQ+QHPPPNASAMRCI PAGGSAIKRASSGTGVFLPRRHVNPS+CRHKQGSPA
Sbjct: 267 CPWIPPPHQSQHPPPNASAMRCIHPAGGSAIKRASSGTGVFLPRRHVNPSECRHKQGSPA 326

Query: 136 INFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
           INFTEEMKSS QAPFNGWLSSS+DSRKNPLLPLP  SIRAEGAVKQELHLPQEWTY
Sbjct: 327 INFTEEMKSSNQAPFNGWLSSSVDSRKNPLLPLPRSSIRAEGAVKQELHLPQEWTY 382

[Close]

BLAST of Carg06001 vs. NCBI nr
Match: XP_008441420.1 (PREDICTED: uncharacterized protein LOC103485542 [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 9.1e-57
Identity = 119/181 (65.75%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASA-WERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLY 75
           QVQ+V QDLVLQALRAS+   RQA V WSAQPH K +IQNRERN+VN + RC  G G LY
Sbjct: 181 QVQQVKQDLVLQALRASSLGGRQAKVSWSAQPHWKQEIQNRERNVVNASGRCGVGAGGLY 240

Query: 76  HSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
           HSPW+PP QNQ P PN + +RCI P   S +KRASSGTGVFLPRR++NP+DCR KQG P+
Sbjct: 241 HSPWLPPLQNQQPTPNTTVVRCIHPV-RSGVKRASSGTGVFLPRRYINPTDCRQKQGIPS 300

Query: 136 INFTEEMKSSIQAPFNGWLSSSID----SRKNPLLPLPPRSIRAEGAVKQE-LHLPQEWT 191
           + F EEMKS IQAP NG LS   D     R NPLLPL PRS R EG + QE  HLPQEWT
Sbjct: 301 VRFAEEMKSPIQAPLNGCLSPGFDPILSRRNNPLLPL-PRSFRTEGGMNQEHHHLPQEWT 359

[Close]

BLAST of Carg06001 vs. TAIR10
Match: AT5G59050.1 (unknown protein)

HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04
Identity = 43/136 (31.62%), Postives = 51/136 (37.50%), Query Frame = 0


Query: 82  HQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI----NF 141
           HQNQ P     A+       GS  +  S GTGVFLPR H    + R K G   +      
Sbjct: 181 HQNQRPRSGVKAVF----VDGSGSRTGSGGTGVFLPRGHGTVVESRKKSGCSTVIIPARV 240

Query: 142 TEEMK------------SSIQAPFNGWL-----SSSIDSRKNPLLPLPPRSIRAEGAVKQ 191
            E +K            SS   PF+  L     +  I S KN  L         E  +  
Sbjct: 241 VEALKVHFDKLGVPSTFSSDIPPFHDALLVSMNNKKIKSNKNTSLSRVQSGSPYEMEMSA 300

[Close]

BLAST of Carg06001 vs. TAIR10
Match: AT3G55690.1 (unknown protein)

HSP 1 Score: 43.1 bits (100), Expect = 2.2e-04
Identity = 31/94 (32.98%), Postives = 44/94 (46.81%), Query Frame = 0


Query: 103 SAIKRASSGTGVFLPRRHVNPSDC-RHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRK 162
           +A+K  S+GTGVFLPR++ NPSD  + K G   +    + K  I+          +  + 
Sbjct: 207 TAVKSPSTGTGVFLPRKYSNPSDSPKKKSGDGCVKVVNQQKPKIEV-------LPVRCKP 266

Query: 163 NPLLPLPP-RS----IRAEGAVKQELHLPQEWTY 191
           N    L   RS    +   G +K E  L QEW Y
Sbjct: 267 NSKAGLSTGRSKIDYVAGGGCLKHEKPLLQEWMY 293

[Close]

BLAST of Carg06001 vs. TrEMBL
Match: tr|A0A1S3B425|A0A1S3B425_CUCME (uncharacterized protein LOC103485542 OS=Cucumis melo OX=3656 GN=LOC103485542 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.0e-57
Identity = 119/181 (65.75%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASA-WERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLY 75
           QVQ+V QDLVLQALRAS+   RQA V WSAQPH K +IQNRERN+VN + RC  G G LY
Sbjct: 181 QVQQVKQDLVLQALRASSLGGRQAKVSWSAQPHWKQEIQNRERNVVNASGRCGVGAGGLY 240

Query: 76  HSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
           HSPW+PP QNQ P PN + +RCI P   S +KRASSGTGVFLPRR++NP+DCR KQG P+
Sbjct: 241 HSPWLPPLQNQQPTPNTTVVRCIHPV-RSGVKRASSGTGVFLPRRYINPTDCRQKQGIPS 300

Query: 136 INFTEEMKSSIQAPFNGWLSSSID----SRKNPLLPLPPRSIRAEGAVKQE-LHLPQEWT 191
           + F EEMKS IQAP NG LS   D     R NPLLPL PRS R EG + QE  HLPQEWT
Sbjct: 301 VRFAEEMKSPIQAPLNGCLSPGFDPILSRRNNPLLPL-PRSFRTEGGMNQEHHHLPQEWT 359

[Close]

BLAST of Carg06001 vs. TrEMBL
Match: tr|A0A0A0KA94|A0A0A0KA94_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009380 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.0e-57
Identity = 119/181 (65.75%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASAW-ERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLY 75
           QVQ+V QDLVLQALRAS+  ERQA   WSAQPH K +IQNRERN+VN + RC GGTG LY
Sbjct: 181 QVQQVKQDLVLQALRASSLRERQAKASWSAQPHWKQEIQNRERNVVNASGRCGGGTGGLY 240

Query: 76  HSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
           HSPW+PP QNQ P  N + +RCI P   S +KRASSGTGVFLPRR++NPS+CR KQG P+
Sbjct: 241 HSPWLPPLQNQQPTSNPTVVRCIHPV-RSGVKRASSGTGVFLPRRYINPSECRQKQGIPS 300

Query: 136 INFTEEMKSSIQAPFNGWLSSSID----SRKNPLLPLPPRSIRAEGAVKQE-LHLPQEWT 191
           + F EEMKS IQAP NG  S   D     R NPLLPL PRS R EG + QE  HLPQEWT
Sbjct: 301 VRFVEEMKSPIQAPLNGCHSPGFDPILSRRNNPLLPL-PRSFRTEGVMNQEHHHLPQEWT 359

[Close]

BLAST of Carg06001 vs. TrEMBL
Match: tr|M5XJR9|M5XJR9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G243200 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.0e-19
Identity = 77/197 (39.09%), Postives = 103/197 (52.28%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRAS-AWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLY 75
           Q Q V Q+ VL   + S AW +Q  + WSA   ++  IQ+R R+I    S   G   S+ 
Sbjct: 220 QPQHVRQNQVLNKPQCSAAWGKQGQLPWSAYQQQQQQIQSRGRSIPGYESGRCGHGVSIP 279

Query: 76  HSPWIP----PHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPS-DCRHK 135
            S W P     HQNQHP  N +++R I P  GS IKR  +GTGVFLPRR+ NP+ + R K
Sbjct: 280 QSAWPPLQVQQHQNQHPQRNNASVRPILP-NGSNIKRECAGTGVFLPRRYSNPAPEPRKK 339

Query: 136 QGSPAI------------NFTEEMKSSIQAPFNGWLS---SSIDSRKNPLLPLPP-RSIR 191
            G P +            NF E+M S     FN  L+    ++ +R+N LL       +R
Sbjct: 340 AGCPTVLLPAKVVQALNLNF-EDMNSQAPPRFNSGLAPDHEALLARRNALLAQQRLGGLR 399

[Close]

BLAST of Carg06001 vs. TrEMBL
Match: tr|A0A2P5EQ56|A0A2P5EQ56_9ROSA (TIP41-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_166080 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.5e-18
Identity = 71/204 (34.80%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASAWERQAMVGWSAQPH------------RKPDIQNRERNIVNVT 75
           Q Q +  D+ ++   ASAW RQ  VGWS+Q                  IQNR RN     
Sbjct: 221 QFQALKPDMAVKPQCASAWGRQMKVGWSSQAQVXXXXXXXXXXXYHQQIQNRARNTGYEH 280

Query: 76  SRCVGGTGSLYHSPWIP---PHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRH 135
            RC G   +L  S W P     QNQ P  N S+M  + P  GS +KR  +GTGVFLPRR+
Sbjct: 281 GRC-GRALNLPQSAWPPLQVQSQNQQPLHNRSSMGAV-PLAGSGVKRECAGTGVFLPRRY 340

Query: 136 VNPSDCRHKQGSPAINFTEEMKSSIQAPF---NGWLS-----------SSIDSRKNPLLP 191
            NP++ R K   P +    ++  ++   F   NG+              ++ +R+N +L 
Sbjct: 341 NNPTESRKKSACPNVLLPAKVVQALNLNFEDTNGYSQPRFGCNLGPDHEALMARRNAILE 400

[Close]

BLAST of Carg06001 vs. TrEMBL
Match: tr|A0A2P5C660|A0A2P5C660_PARAD (TIP41-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_180870 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 73/204 (35.78%), Postives = 95/204 (46.57%), Query Frame = 0


Query: 16  QVQKVGQDLVLQALRASAWERQAMVGWSAQPH------------RKPDIQNRERNIVNVT 75
           Q Q +  D  ++   A AW RQ  VGWS+Q                  IQNR RN     
Sbjct: 221 QFQALKPDAAVKPQCALAWGRQMNVGWSSQAQVXXXXXXXXXXXXXXQIQNRARNTGYEN 280

Query: 76  SRCVGGTGSLYHSPWIP---PHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRH 135
            RC G   +L  S W P    +QNQ P  N S+M  + P  GS +KR  +GTGVFLPRR+
Sbjct: 281 GRC-GRALNLPQSAWPPLQVQNQNQQPLHNRSSMGAV-PLAGSGVKRECAGTGVFLPRRY 340

Query: 136 VNPSDCRHKQGSP----------AINFTEEMKSSIQAPFNGWL----SSSIDSRKNPLLP 191
            NP++ R K   P          A+N   E  S    P  G        +  +R+N +L 
Sbjct: 341 NNPTESRKKSACPNVLLPAKVVQALNLNFEDTSGYSQPRFGCNLGPDHEASMARRNAILE 400

The following BLAST results are available for this feature:

BLAST of Carg06001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957513.1	4.6e-93	96.57	uncharacterized protein LOC111458886 [Cucurbita moschata]	[more]
XP_023515357.1	3.7e-90	93.71	uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022990003.1	5.0e-87	91.48	uncharacterized protein LOC111487028 isoform X2 [Cucurbita maxima]	[more]
XP_022990001.1	5.0e-87	91.48	uncharacterized protein LOC111487028 isoform X1 [Cucurbita maxima]	[more]
XP_008441420.1	9.1e-57	65.75	PREDICTED: uncharacterized protein LOC103485542 [Cucumis melo]	[more]

BLAST of Carg06001 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59050.1	1.7e-04	31.62	unknown protein	[more]
AT3G55690.1	2.2e-04	32.98	unknown protein	[more]

BLAST of Carg06001 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg06001 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B425\|A0A1S3B425_CUCME	6.0e-57	65.75	uncharacterized protein LOC103485542 OS=Cucumis melo OX=3656 GN=LOC103485542 PE=...	[more]
tr\|A0A0A0KA94\|A0A0A0KA94_CUCSA	6.0e-57	65.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009380 PE=4 SV=1	[more]
tr\|M5XJR9\|M5XJR9_PRUPE	5.0e-19	39.09	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G243200 PE=4 SV=1	[more]
tr\|A0A2P5EQ56\|A0A2P5EQ56_9ROSA	1.5e-18	34.80	TIP41-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_166080 PE=4 SV=1	[more]
tr\|A0A2P5C660\|A0A2P5C660_PARAD	2.1e-17	35.78	TIP41-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_180870 PE=4 SV...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06001-RA	Carg06001-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33356	FAMILY NOT NAMED	coord: 16..190
None	No IPR available	PANTHER	PTHR33356:SF11	SUBFAMILY NOT NAMED	coord: 16..190

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06001	Cla006563	Watermelon (97103) v1	carwmB0024
Carg06001	Csa6G009380	Cucumber (Chinese Long) v2	carcuB0023
Carg06001	MELO3C008261	Melon (DHL92) v3.5.1	carmeB0023
Carg06001	ClCG11G006470	Watermelon (Charleston Gray)	carwcgB0019
Carg06001	CSPI06G01390	Wild cucumber (PI 183967)	carcpiB0024
Carg06001	Cucsa.136370	Cucumber (Gy14) v1	carcgyB0019
Carg06001	CmaCh04G029300	Cucurbita maxima (Rimu)	carcmaB0033
Carg06001	CmaCh15G001140	Cucurbita maxima (Rimu)	carcmaB0030
Carg06001	CmoCh04G030510	Cucurbita moschata (Rifu)	carcmoB0033
Carg06001	CmoCh15G001220	Cucurbita moschata (Rifu)	carcmoB0031
Carg06001	Lsi03G003420	Bottle gourd (USVL1VR-Ls)	carlsiB017
Carg06001	Cp4.1LG13g07180	Cucurbita pepo (Zucchini)	carcpeB0031
Carg06001	Cp4.1LG01g25590	Cucurbita pepo (Zucchini)	carcpeB0034
Carg06001	CsGy6G001440	Cucumber (Gy14) v2	carcgybB0023
Carg06001	MELO3C008261.2	Melon (DHL92) v3.6.1	carmedB0024
Carg06001	CsaV3_6G001520	Cucumber (Chinese Long) v3	carcucB0024
Carg06001	Cla97C11G213450	Watermelon (97103) v2	carwmbB0015
Carg06001	Bhi04G001925	Wax gourd	carwgoB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg06001	Carg02105	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06001	Silver-seed gourd	carcarB016
Carg06001	Silver-seed gourd	carcarB022
Carg06001	Silver-seed gourd	carcarB023
Carg06001	Silver-seed gourd	carcarB025
Carg06001	Silver-seed gourd	carcarB026
Carg06001	Cucumber (Gy14) v2	carcgybB0018
Carg06001	Cucumber (Gy14) v1	carcgyB0022
Carg06001	Cucurbita maxima (Rimu)	carcmaB0028
Carg06001	Cucurbita maxima (Rimu)	carcmaB0031
Carg06001	Cucurbita maxima (Rimu)	carcmaB0034
Carg06001	Cucurbita maxima (Rimu)	carcmaB0035
Carg06001	Cucurbita moschata (Rifu)	carcmoB0029
Carg06001	Cucurbita moschata (Rifu)	carcmoB0034
Carg06001	Cucurbita pepo (Zucchini)	carcpeB0035
Carg06001	Cucurbita pepo (Zucchini)	carcpeB0036
Carg06001	Wild cucumber (PI 183967)	carcpiB0019
Carg06001	Cucumber (Chinese Long) v2	carcuB0019
Carg06001	Cucumber (Chinese Long) v3	carcucB0019
Carg06001	Bottle gourd (USVL1VR-Ls)	carlsiB020
Carg06001	Melon (DHL92) v3.5.1	carmeB0024
Carg06001	Melon (DHL92) v3.6.1	carmedB0025
Carg06001	Watermelon (Charleston Gray)	carwcgB0018
Carg06001	Watermelon (Charleston Gray)	carwcgB0025
Carg06001	Watermelon (97103) v1	carwmB0017
Carg06001	Watermelon (97103) v2	carwmbB0014
Carg06001	Watermelon (97103) v2	carwmbB0022
Carg06001	Wax gourd	carwgoB0017