CsGy6G001230 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G001230
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionAT-hook motif nuclear-localized protein
LocationChr6 : 869991 .. 870731 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAATTGGGGTGGAATTGGGAATCTTCCAACCACACCACTTGAATTTCAAAAAACAGAGCAACAACATAGTACTAAGAATTATGAAGATGGGGATGGAGTTAAACCCAAGAGGCGGCCACGAGGCCGGCCACGAGGCTCCAAAAACAAGCCGAAGCCACCGATTCTCATCGCCAAAATCACTCCCAACACCCTTCAAACCCACGTTTTCGAAATCGCCACCGCCACCGACATTGCCGACTCCATTTTCACCTTCACCCAACGCCGCCGCCGTGGGGTTTCCATTCTCAGCGCCACCGGCCTCGTCACTGACATCACTCTCCGTCAACCCCCCGGCGTCATCACCCTCCACCAACGCTTCGAGATCTTGTCTCTCTCTGGCGCCTTCCTTCCCACGCCCTCCCCCCACGGAACTTCCGCATTGACCGTCTATCTCGCTGGCGACCAAGGGCGTGTCGTCGGAGGCCTTGTCGCTGGCCCCATAATAGCCGCCGGCCCCGTGGTAGTAGTTGCAGCTTCATTTACCAATGCTATGTATGAAAAATTGCCGATGGAAGAAAATGAAGAGAAAACAGAGGAGGATAAGCAATTGGAAGAAAACATTAATGGAAACAAGAATTCAATGGGAGAATCATCATCATTAGCAGCAGCAAGTTCTTTGGGAGTTCATAATTTGATTCCTAACACTCAAATTTCACAAGAAACGTTTTGGGCTCCTCCTCCTCCTCCATCTTATTAA

mRNA sequence

ATGGCGAATTGGGGTGGAATTGGGAATCTTCCAACCACACCACTTGAATTTCAAAAAACAGAGCAACAACATAGTACTAAGAATTATGAAGATGGGGATGGAGTTAAACCCAAGAGGCGGCCACGAGGCCGGCCACGAGGCTCCAAAAACAAGCCGAAGCCACCGATTCTCATCGCCAAAATCACTCCCAACACCCTTCAAACCCACGTTTTCGAAATCGCCACCGCCACCGACATTGCCGACTCCATTTTCACCTTCACCCAACGCCGCCGCCGTGGGGTTTCCATTCTCAGCGCCACCGGCCTCGTCACTGACATCACTCTCCGTCAACCCCCCGGCGTCATCACCCTCCACCAACGCTTCGAGATCTTGTCTCTCTCTGGCGCCTTCCTTCCCACGCCCTCCCCCCACGGAACTTCCGCATTGACCGTCTATCTCGCTGGCGACCAAGGGCGTGTCGTCGGAGGCCTTGTCGCTGGCCCCATAATAGCCGCCGGCCCCGTGGTAGTAGTTGCAGCTTCATTTACCAATGCTATGTATGAAAAATTGCCGATGGAAGAAAATGAAGAGAAAACAGAGGAGGATAAGCAATTGGAAGAAAACATTAATGGAAACAAGAATTCAATGGGAGAATCATCATCATTAGCAGCAGCAAGTTCTTTGGGAGTTCATAATTTGATTCCTAACACTCAAATTTCACAAGAAACGTTTTGGGCTCCTCCTCCTCCTCCATCTTATTAA

Coding sequence (CDS)

ATGGCGAATTGGGGTGGAATTGGGAATCTTCCAACCACACCACTTGAATTTCAAAAAACAGAGCAACAACATAGTACTAAGAATTATGAAGATGGGGATGGAGTTAAACCCAAGAGGCGGCCACGAGGCCGGCCACGAGGCTCCAAAAACAAGCCGAAGCCACCGATTCTCATCGCCAAAATCACTCCCAACACCCTTCAAACCCACGTTTTCGAAATCGCCACCGCCACCGACATTGCCGACTCCATTTTCACCTTCACCCAACGCCGCCGCCGTGGGGTTTCCATTCTCAGCGCCACCGGCCTCGTCACTGACATCACTCTCCGTCAACCCCCCGGCGTCATCACCCTCCACCAACGCTTCGAGATCTTGTCTCTCTCTGGCGCCTTCCTTCCCACGCCCTCCCCCCACGGAACTTCCGCATTGACCGTCTATCTCGCTGGCGACCAAGGGCGTGTCGTCGGAGGCCTTGTCGCTGGCCCCATAATAGCCGCCGGCCCCGTGGTAGTAGTTGCAGCTTCATTTACCAATGCTATGTATGAAAAATTGCCGATGGAAGAAAATGAAGAGAAAACAGAGGAGGATAAGCAATTGGAAGAAAACATTAATGGAAACAAGAATTCAATGGGAGAATCATCATCATTAGCAGCAGCAAGTTCTTTGGGAGTTCATAATTTGATTCCTAACACTCAAATTTCACAAGAAACGTTTTGGGCTCCTCCTCCTCCTCCATCTTATTAA

Protein sequence

MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRPRGRPRGSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIAAGPVVVVAASFTNAMYEKLPMEENEEKTEEDKQLEENINGNKNSMGESSSLAAASSLGVHNLIPNTQISQETFWAPPPPPSY
Homology
[Close]
BLAST of CsGy6G001230 vs. NCBI nr
Match: XP_011658381.1 (PREDICTED: AT-hook motif nuclear-localized protein 15 [Cucumis sativus] >KGN45738.1 hypothetical protein Csa_6G008690 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 9.0e-89
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 

Query: 1   MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAK 60
           MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAK
Sbjct: 1   MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAK 60

Query: 61  ITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQR 120
           ITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQR
Sbjct: 61  ITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQR 120

Query: 121 FEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIXXXXXXXXXXXXXXXXX 180
           FEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIXXXXXXXXXXXXXXXXX
Sbjct: 121 FEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAP 240

Query: 241 PPPPSY 247
           PPPPSY
Sbjct: 241 PPPPSY 246

[Close]
BLAST of CsGy6G001230 vs. NCBI nr
Match: XP_008441388.1 (PREDICTED: AT-hook motif nuclear-localized protein 22 [Cucumis melo])

HSP 1 Score: 283.9 bits (725), Expect = 5.3e-73
Identity = 156/242 (64.46%), Postives = 162/242 (66.94%), Query Frame = 0 

Query: 1   MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAK 60
           MANWGGIGNL  TPL+ QKTEQQH+TK++EDGDGVK KRR       SKNKPKPPILIAK
Sbjct: 1   MANWGGIGNLAITPLDLQKTEQQHTTKDHEDGDGVKAKRRPRGRPPGSKNKPKPPILIAK 60

Query: 61  ITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQR 120
            TPNTLQTHVFEIATATDIA SI TF  RRRRGVSILSATGLV D+TLRQPPGVITLHQR
Sbjct: 61  NTPNTLQTHVFEIATATDIAHSICTFAHRRRRGVSILSATGLVDDVTLRQPPGVITLHQR 120

Query: 121 FEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIXXXXXXXXXXXXXXXXX 180
           FEILSLSGAFLPTPSPHGTSALTVYLAG QGRVVGGLVAGP+I                 
Sbjct: 121 FEILSLSGAFLPTPSPHGTSALTVYLAGGQGRVVGGLVAGPLI-AAAPVVVVAASFTNAM 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAP 240
                                                      HNL PNTQISQE FWAP
Sbjct: 181 YEKLPMEEDEEKTEKDKQLEENINGNNSMGESSSLAAASSLGVHNLTPNTQISQEMFWAP 240

Query: 241 PP 243
           PP
Sbjct: 241 PP 241

[Close]
BLAST of CsGy6G001230 vs. NCBI nr
Match: XP_023549800.1 (AT-hook motif nuclear-localized protein 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.8 bits (517), Expect = 6.9e-49
Identity = 159/223 (71.30%), Postives = 170/223 (76.23%), Query Frame = 0 

Query: 31  DGDGVKPKRRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRR 90
           D  GVKPKRR       SKNKPKPPI+I K TPN LQ+HVFEI TATDIA SI TF  RR
Sbjct: 49  DHHGVKPKRRPRGRPPGSKNKPKPPIVITKHTPNALQSHVFEITTATDIAHSISTFAHRR 108

Query: 91  RRGVSILSATGLVTDITLRQPPGVITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQ 150
            RGVSILSATG+V D+TLRQP GVITLH+RFEILSLSGAFLPTPSPHG + LTVYLAG  
Sbjct: 109 HRGVSILSATGVVADVTLRQPAGVITLHERFEILSLSGAFLPTPSPHGATGLTVYLAGGH 168

Query: 151 GRVVGGLVAGPII-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 210
           GRVVGGLVAGP+I                      XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 169 GRVVGGLVAGPLIAAGTVIVVAASFTNAMYERLPMXXXXXXXXXXXXXXXXXXXXXXXXX 228

Query: 211 XXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWA--PPPPPSY 247
           XXXXXXXXXXXXXXX   ++LIP TQ+SQ+ FWA  PPPPPSY
Sbjct: 229 XXXXXXXXXXXXXXXLPVYDLIPQTQMSQDMFWAPLPPPPPSY 271

[Close]
BLAST of CsGy6G001230 vs. NCBI nr
Match: XP_022938671.1 (AT-hook motif nuclear-localized protein 15-like [Cucurbita moschata])

HSP 1 Score: 197.2 bits (500), Expect = 6.5e-47
Identity = 156/219 (71.23%), Postives = 167/219 (76.26%), Query Frame = 0 

Query: 35  VKPKRRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGV 94
           VK KRR       SKNKPKPPI+I K TPN LQ+HVFEI TATDIA SI TF  RR RGV
Sbjct: 53  VKTKRRPRGRPPGSKNKPKPPIVITKHTPNALQSHVFEITTATDIAHSISTFAHRRHRGV 112

Query: 95  SILSATGLVTDITLRQPPGVITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVV 154
           SILSATG+V D+TLRQP GVITLH+RFEILSLSGAFLPTPSPHG + LTVYLAG  G+VV
Sbjct: 113 SILSATGVVADVTLRQPAGVITLHERFEILSLSGAFLPTPSPHGATGLTVYLAGGHGQVV 172

Query: 155 GGLVAGPII-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 214
           GGLVAGP+I                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 173 GGLVAGPLIAAGTVIVVAASFTNAMYERLPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 232

Query: 215 XXXXXXXXXXXXXXHNLIPNTQISQETFWA--PPPPPSY 247
           XXXXXXXXXXX   ++LIP TQISQ+ FWA  PPPPPSY
Sbjct: 233 XXXXXXXXXXXLPVYDLIPQTQISQDMFWAPLPPPPPSY 271

[Close]
BLAST of CsGy6G001230 vs. NCBI nr
Match: XP_022993946.1 (AT-hook motif nuclear-localized protein 15-like [Cucurbita maxima])

HSP 1 Score: 193.4 bits (490), Expect = 9.4e-46
Identity = 110/181 (60.77%), Postives = 118/181 (65.19%), Query Frame = 0 

Query: 1   MAN--WGGIGNLPTTPLE----------------FQKTEQQHSTKNYEDGDGVKPKRRXX 60
           MAN  WGGIGNL    L+                                 GVK KRR  
Sbjct: 1   MANRWWGGIGNLTMIRLDSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHGVKTKRRPR 60

Query: 61  XXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGL 120
                SKNKPKPPI+I K TPN LQ+HVFEI TATDIA SI TF  RR RGVSILSATG+
Sbjct: 61  GRPPGSKNKPKPPIVITKHTPNALQSHVFEITTATDIAHSISTFAHRRHRGVSILSATGV 120

Query: 121 VTDITLRQPPGVITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPI 164
           V D+TLRQP GVITLH+RFEILSLSGAFLP PSPHG + LTVYLAG  GRVVGGLVAGP+
Sbjct: 121 VADVTLRQPAGVITLHERFEILSLSGAFLPAPSPHGATGLTVYLAGGHGRVVGGLVAGPL 180

[Close]
BLAST of CsGy6G001230 vs. TAIR10
Match: AT4G14465.1 (AT-hook motif nuclear-localized protein 20)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 72/128 (56.25%), Postives = 95/128 (74.22%), Query Frame = 0 

Query: 39  RRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILS 98
           RR       SKNKPK PI + + +PN L++HV EI+  +D+AD+I  F++RR+RGV +LS
Sbjct: 67  RRPRGRPPGSKNKPKAPIFVTRDSPNALRSHVLEISDGSDVADTIAHFSRRRQRGVCVLS 126

Query: 99  ATGLVTDITLRQ---PPGVITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVG 158
            TG V ++TLRQ   P GV++L  RFEILSL+GAFLP PSP G++ LTVYLAG QG+VVG
Sbjct: 127 GTGSVANVTLRQAAAPGGVVSLQGRFEILSLTGAFLPGPSPPGSTGLTVYLAGVQGQVVG 186

Query: 159 GLVAGPII 164
           G V GP++
Sbjct: 187 GSVVGPLL 194

[Close]
BLAST of CsGy6G001230 vs. TAIR10
Match: AT3G55560.1 (AT-hook protein of GA feedback 2)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 74/129 (57.36%), Postives = 96/129 (74.42%), Query Frame = 0 

Query: 39  RRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILS 98
           RR       SKNKPK P+++ K +PN+LQ+HV EIAT  D+A+S+  F +RR RGVS+LS
Sbjct: 88  RRPRGRPPGSKNKPKSPVVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLS 147

Query: 99  ATGLVTDITLRQPP---GVITLHQRFEILSLSGAFLPTP-SPHGTSALTVYLAGDQGRVV 158
            +GLVT++TLRQP    GV++L  +FEILS+ GAFLPT  SP   + LT+YLAG QG+VV
Sbjct: 148 GSGLVTNVTLRQPAASGGVVSLRGQFEILSMCGAFLPTSGSPAAAAGLTIYLAGAQGQVV 207

Query: 159 GGLVAGPII 164
           GG VAGP+I
Sbjct: 208 GGGVAGPLI 216

[Close]
BLAST of CsGy6G001230 vs. TAIR10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 137.9 bits (346), Expect = 8.5e-33
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0 

Query: 39  RRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILS 98
           RR       SKNKPKPPI+I + + N L+THV EI    D+ +S+ TF +RR+RGV ++S
Sbjct: 105 RRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVMS 164

Query: 99  ATGLVTDITLRQP-----PG-VITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGR 158
            TG VT++T+RQP     PG V++LH RFEILSLSG+FLP P+P   + L+VYLAG QG+
Sbjct: 165 GTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAGGQGQ 224

Query: 159 VVGGLVAGPII 164
           VVGG V GP++
Sbjct: 225 VVGGSVVGPLL 235

[Close]
BLAST of CsGy6G001230 vs. TAIR10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32
Identity = 67/123 (54.47%), Postives = 90/123 (73.17%), Query Frame = 0 

Query: 48  SKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDIT 107
           SKNKPKPPI+I + + N L++HV E+A   D+ +S+  F +RR+RG+ +LS  G VT++T
Sbjct: 98  SKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVT 157

Query: 108 LRQP---PG----VITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAG 164
           +RQP   PG    V+ LH RFEILSLSG+FLP P+P   S LT+YLAG QG+VVGG V G
Sbjct: 158 IRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVG 217

[Close]
BLAST of CsGy6G001230 vs. TAIR10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32
Identity = 71/129 (55.04%), Postives = 92/129 (71.32%), Query Frame = 0 

Query: 39  RRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILS 98
           RR       SKNKPK PI+I + + N L+THV EI    DI D + TF +RR+RGV ++S
Sbjct: 118 RRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMS 177

Query: 99  ATGLVTDITLRQ---PPG-VITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVV 158
            TG VT++T+RQ   PPG V++LH RFEILSLSG+FLP P+P   + L+VYLAG QG+VV
Sbjct: 178 GTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVV 237

Query: 159 GGLVAGPII 164
           GG V GP++
Sbjct: 238 GGSVVGPLL 246

[Close]
BLAST of CsGy6G001230 vs. Swiss-Prot
Match: sp|Q8GWQ2|AHL20_ARATH (AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AHL20 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.4e-32
Identity = 72/128 (56.25%), Postives = 95/128 (74.22%), Query Frame = 0 

Query: 39  RRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILS 98
           RR       SKNKPK PI + + +PN L++HV EI+  +D+AD+I  F++RR+RGV +LS
Sbjct: 67  RRPRGRPPGSKNKPKAPIFVTRDSPNALRSHVLEISDGSDVADTIAHFSRRRQRGVCVLS 126

Query: 99  ATGLVTDITLRQ---PPGVITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVG 158
            TG V ++TLRQ   P GV++L  RFEILSL+GAFLP PSP G++ LTVYLAG QG+VVG
Sbjct: 127 GTGSVANVTLRQAAAPGGVVSLQGRFEILSLTGAFLPGPSPPGSTGLTVYLAGVQGQVVG 186

Query: 159 GLVAGPII 164
           G V GP++
Sbjct: 187 GSVVGPLL 194

[Close]
BLAST of CsGy6G001230 vs. Swiss-Prot
Match: sp|Q9M2S3|AHL15_ARATH (AT-hook motif nuclear-localized protein 15 OS=Arabidopsis thaliana OX=3702 GN=AHL15 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.1e-32
Identity = 74/129 (57.36%), Postives = 96/129 (74.42%), Query Frame = 0 

Query: 39  RRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILS 98
           RR       SKNKPK P+++ K +PN+LQ+HV EIAT  D+A+S+  F +RR RGVS+LS
Sbjct: 88  RRPRGRPPGSKNKPKSPVVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLS 147

Query: 99  ATGLVTDITLRQPP---GVITLHQRFEILSLSGAFLPTP-SPHGTSALTVYLAGDQGRVV 158
            +GLVT++TLRQP    GV++L  +FEILS+ GAFLPT  SP   + LT+YLAG QG+VV
Sbjct: 148 GSGLVTNVTLRQPAASGGVVSLRGQFEILSMCGAFLPTSGSPAAAAGLTIYLAGAQGQVV 207

Query: 159 GGLVAGPII 164
           GG VAGP+I
Sbjct: 208 GGGVAGPLI 216

[Close]
BLAST of CsGy6G001230 vs. Swiss-Prot
Match: sp|O49662|AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0 

Query: 39  RRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILS 98
           RR       SKNKPKPPI+I + + N L+THV EI    D+ +S+ TF +RR+RGV ++S
Sbjct: 105 RRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVMS 164

Query: 99  ATGLVTDITLRQP-----PG-VITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGR 158
            TG VT++T+RQP     PG V++LH RFEILSLSG+FLP P+P   + L+VYLAG QG+
Sbjct: 165 GTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAGGQGQ 224

Query: 159 VVGGLVAGPII 164
           VVGG V GP++
Sbjct: 225 VVGGSVVGPLL 235

[Close]
BLAST of CsGy6G001230 vs. Swiss-Prot
Match: sp|O22130|AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.4e-31
Identity = 67/123 (54.47%), Postives = 90/123 (73.17%), Query Frame = 0 

Query: 48  SKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDIT 107
           SKNKPKPPI+I + + N L++HV E+A   D+ +S+  F +RR+RG+ +LS  G VT++T
Sbjct: 98  SKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVT 157

Query: 108 LRQP---PG----VITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAG 164
           +RQP   PG    V+ LH RFEILSLSG+FLP P+P   S LT+YLAG QG+VVGG V G
Sbjct: 158 IRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVG 217

[Close]
BLAST of CsGy6G001230 vs. Swiss-Prot
Match: sp|Q9SZ70|AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.4e-31
Identity = 71/129 (55.04%), Postives = 92/129 (71.32%), Query Frame = 0 

Query: 39  RRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILS 98
           RR       SKNKPK PI+I + + N L+THV EI    DI D + TF +RR+RGV ++S
Sbjct: 118 RRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMS 177

Query: 99  ATGLVTDITLRQ---PPG-VITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVV 158
            TG VT++T+RQ   PPG V++LH RFEILSLSG+FLP P+P   + L+VYLAG QG+VV
Sbjct: 178 GTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVV 237

Query: 159 GGLVAGPII 164
           GG V GP++
Sbjct: 238 GGSVVGPLL 246

[Close]
BLAST of CsGy6G001230 vs. TrEMBL
Match: tr|A0A0A0K8D4|A0A0A0K8D4_CUCSA (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008690 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 5.9e-89
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 

Query: 1   MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAK 60
           MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAK
Sbjct: 1   MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAK 60

Query: 61  ITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQR 120
           ITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQR
Sbjct: 61  ITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQR 120

Query: 121 FEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIXXXXXXXXXXXXXXXXX 180
           FEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIXXXXXXXXXXXXXXXXX
Sbjct: 121 FEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAP 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAP
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAP 240

Query: 241 PPPPSY 247
           PPPPSY
Sbjct: 241 PPPPSY 246

[Close]
BLAST of CsGy6G001230 vs. TrEMBL
Match: tr|A0A1S3B427|A0A1S3B427_CUCME (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103485519 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.5e-73
Identity = 156/242 (64.46%), Postives = 162/242 (66.94%), Query Frame = 0 

Query: 1   MANWGGIGNLPTTPLEFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAK 60
           MANWGGIGNL  TPL+ QKTEQQH+TK++EDGDGVK KRR       SKNKPKPPILIAK
Sbjct: 1   MANWGGIGNLAITPLDLQKTEQQHTTKDHEDGDGVKAKRRPRGRPPGSKNKPKPPILIAK 60

Query: 61  ITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPPGVITLHQR 120
            TPNTLQTHVFEIATATDIA SI TF  RRRRGVSILSATGLV D+TLRQPPGVITLHQR
Sbjct: 61  NTPNTLQTHVFEIATATDIAHSICTFAHRRRRGVSILSATGLVDDVTLRQPPGVITLHQR 120

Query: 121 FEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPIIXXXXXXXXXXXXXXXXX 180
           FEILSLSGAFLPTPSPHGTSALTVYLAG QGRVVGGLVAGP+I                 
Sbjct: 121 FEILSLSGAFLPTPSPHGTSALTVYLAGGQGRVVGGLVAGPLI-AAAPVVVVAASFTNAM 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAP 240
                                                      HNL PNTQISQE FWAP
Sbjct: 181 YEKLPMEEDEEKTEKDKQLEENINGNNSMGESSSLAAASSLGVHNLTPNTQISQEMFWAP 240

Query: 241 PP 243
           PP
Sbjct: 241 PP 241

[Close]
BLAST of CsGy6G001230 vs. TrEMBL
Match: tr|A0A0K9QWH0|A0A0K9QWH0_SPIOL (AT-hook motif nuclear-localized protein OS=Spinacia oleracea OX=3562 GN=SOVF_133730 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.4e-36
Identity = 81/119 (68.07%), Postives = 97/119 (81.51%), Query Frame = 0 

Query: 48  SKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQRRRRGVSILSATGLVTDIT 107
           SKNKPKPPI+I K +PN L++HV EI T  DIADS+ TF QRR RGVS+LS +G+VT++T
Sbjct: 91  SKNKPKPPIVITKESPNALRSHVLEINTGADIADSLATFAQRRHRGVSVLSGSGIVTNVT 150

Query: 108 LRQPP---GVITLHQRFEILSLSGAFLPTPSPHGTSALTVYLAGDQGRVVGGLVAGPII 164
           LRQP    GV+TLH RFEILSLSGAFLP+PSP G + LTVYLAG QG+VVGG V GP++
Sbjct: 151 LRQPAAPGGVVTLHGRFEILSLSGAFLPSPSPPGATGLTVYLAGGQGQVVGGGVVGPLV 209

[Close]
BLAST of CsGy6G001230 vs. TrEMBL
Match: tr|A0A2C9V2V6|A0A2C9V2V6_MANES (AT-hook motif nuclear-localized protein OS=Manihot esculenta OX=3983 GN=MANES_10G027000 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 9.9e-36
Identity = 87/137 (63.50%), Postives = 103/137 (75.18%), Query Frame = 0 

Query: 30  EDGDGVKPKRRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIATATDIADSIFTFTQR 89
           E G G    RR       SKNKPKPPI+I K +PN+L++HV EI + +DIADSI TF QR
Sbjct: 96  EPGSG-SSGRRPRGRPPGSKNKPKPPIVITKESPNSLRSHVLEINSGSDIADSIATFAQR 155

Query: 90  RRRGVSILSATGLVTDITLRQPP---GVITLHQRFEILSLSGAFLPTPSPHGTSALTVYL 149
           R RGVSILS +G+VT++TLRQP    GVITLH RFEILSLSG+FLP PSP G + LTVYL
Sbjct: 156 RHRGVSILSGSGVVTNVTLRQPAAPGGVITLHGRFEILSLSGSFLPAPSPPGATGLTVYL 215

Query: 150 AGDQGRVVGGLVAGPII 164
           AG QG+VVGG V GP++
Sbjct: 216 AGGQGQVVGGSVVGPLM 231

[Close]
BLAST of CsGy6G001230 vs. TrEMBL
Match: tr|A5AJT5|A5AJT5_VITVI (AT-hook motif nuclear-localized protein OS=Vitis vinifera OX=29760 GN=VITISV_028561 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.4e-35
Identity = 98/241 (40.66%), Postives = 124/241 (51.45%), Query Frame = 0 

Query: 16  EFQKTEQQHSTKNYEDGDGVKPKRRXXXXXXXSKNKPKPPILIAKITPNTLQTHVFEIAT 75
           E    + + +   +E  +     RR       SKNKPKPPI+I K +PN L++HV EI++
Sbjct: 53  EIDLEDSEQNAGGHEIAEPSSAGRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEISS 112

Query: 76  ATDIADSIFTFTQRRRRGVSILSATGLVTDITLRQPP---GVITLHQRFEILSLSGAFLP 135
            +DIA+SI  F QRR RGVS+LSA+G+V ++TLRQP    GVITL  RFEILSLSGAFLP
Sbjct: 113 GSDIAESIANFAQRRHRGVSVLSASGIVNNVTLRQPAAPGGVITLQGRFEILSLSGAFLP 172

Query: 136 TPSPHGTSALTVYLAGDQGRVVGG------LVAGPIIXXXXXXXXXXXXXXXXXXXXXXX 195
            PSP G + LTVYLAG QG+VVGG      + +GP+I                       
Sbjct: 173 APSPPGATGLTVYLAGGQGQVVGGSVVGALMASGPVIVIAATFSNATFERLPLEDEPANE 232

Query: 196 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNLIPNTQISQETFWAPPP-PPS 247
                                              X  NL+PN Q+  + FWAPPP PP 
Sbjct: 233 GIQMPQTSGVNSGTGGTSAPQSHGLVDPSSMPIYNXPPNLLPNGQMPHDVFWAPPPRPPP 292

The following BLAST results are available for this feature:
BLAST of CsGy6G001230 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658381.19.0e-89100.00PREDICTED: AT-hook motif nuclear-localized protein 15 [Cucumis sativus] >KGN4573... [more]
XP_008441388.15.3e-7364.46PREDICTED: AT-hook motif nuclear-localized protein 22 [Cucumis melo][more]
XP_023549800.16.9e-4971.30AT-hook motif nuclear-localized protein 15-like [Cucurbita pepo subsp. pepo][more]
XP_022938671.16.5e-4771.23AT-hook motif nuclear-localized protein 15-like [Cucurbita moschata][more]
XP_022993946.19.4e-4660.77AT-hook motif nuclear-localized protein 15-like [Cucurbita maxima][more]
BLAST of CsGy6G001230 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14465.11.3e-3356.25AT-hook motif nuclear-localized protein 20[more]
AT3G55560.11.7e-3357.36AT-hook protein of GA feedback 2[more]
AT4G22810.18.5e-3354.20Predicted AT-hook DNA-binding family protein[more]
AT2G45430.12.5e-3254.47AT-hook motif nuclear-localized protein 22[more]
AT4G12050.12.5e-3255.04Predicted AT-hook DNA-binding family protein[more]
BLAST of CsGy6G001230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8GWQ2|AHL20_ARATH2.4e-3256.25AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|Q9M2S3|AHL15_ARATH3.1e-3257.36AT-hook motif nuclear-localized protein 15 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O49662|AHL24_ARATH1.5e-3154.20AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O22130|AHL22_ARATH4.4e-3154.47AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|Q9SZ70|AHL26_ARATH4.4e-3155.04AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
BLAST of CsGy6G001230 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K8D4|A0A0A0K8D4_CUCSA5.9e-89100.00AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_6G0086... [more]
tr|A0A1S3B427|A0A1S3B427_CUCME3.5e-7364.46AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103485519 ... [more]
tr|A0A0K9QWH0|A0A0K9QWH0_SPIOL3.4e-3668.07AT-hook motif nuclear-localized protein OS=Spinacia oleracea OX=3562 GN=SOVF_133... [more]
tr|A0A2C9V2V6|A0A2C9V2V6_MANES9.9e-3663.50AT-hook motif nuclear-localized protein OS=Manihot esculenta OX=3983 GN=MANES_10... [more]
tr|A5AJT5|A5AJT5_VITVI6.4e-3540.66AT-hook motif nuclear-localized protein OS=Vitis vinifera OX=29760 GN=VITISV_028... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014476AT-hook_nuclear
IPR005175PPC_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045824 negative regulation of innate immune response
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003680 AT DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G001230.1CsGy6G001230.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.1330.80coord: 66..192
e-value: 1.9E-5
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..216
NoneNo IPR availablePANTHERPTHR31100FAMILY NOT NAMEDcoord: 21..246
NoneNo IPR availablePANTHERPTHR31100:SF13AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15coord: 21..246
NoneNo IPR availableSUPERFAMILYSSF117856AF0104/ALDC/Ptd012-likecoord: 64..189
IPR005175PPC domainPFAMPF03479DUF296coord: 68..176
e-value: 2.1E-24
score: 85.8
IPR005175PPC domainPROSITEPS51742PPCcoord: 63..196
score: 27.947
IPR005175PPC domainCDDcd11378DUF296coord: 67..163
e-value: 6.67754E-22
score: 86.8706
IPR014476AT-hook motif nuclear-localized proteinPIRSFPIRSF016021ESCAROLAcoord: 12..239
e-value: 5.9E-85
score: 283.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G001230Cla006543Watermelon (97103) v1cgybwmB497
CsGy6G001230Csa6G008690Cucumber (Chinese Long) v2cgybcuB282
CsGy6G001230MELO3C008232Melon (DHL92) v3.5.1cgybmeB407
CsGy6G001230ClCG11G006720Watermelon (Charleston Gray)cgybwcgB397
CsGy6G001230CSPI06G01190Wild cucumber (PI 183967)cgybcpiB288
CsGy6G001230CmaCh15G001030Cucurbita maxima (Rimu)cgybcmaB741
CsGy6G001230CmoCh04G030670Cucurbita moschata (Rifu)cgybcmoB816
CsGy6G001230CmoCh15G001110Cucurbita moschata (Rifu)cgybcmoB722
CsGy6G001230Lsi03G003610Bottle gourd (USVL1VR-Ls)cgyblsiB409
CsGy6G001230Cp4.1LG01g25540Cucurbita pepo (Zucchini)cgybcpeB798
CsGy6G001230Cp4.1LG13g10960Cucurbita pepo (Zucchini)cgybcpeB741
CsGy6G001230MELO3C008232.2Melon (DHL92) v3.6.1cgybmedB406
CsGy6G001230CsaV3_5G008290Cucumber (Chinese Long) v3cgybcucB291
CsGy6G001230CsaV3_6G001310Cucumber (Chinese Long) v3cgybcucB298
CsGy6G001230Cla97C11G213680Watermelon (97103) v2cgybwmbB403
CsGy6G001230Cla97C07G131830Watermelon (97103) v2cgybwmbB457
CsGy6G001230Bhi04G001947Wax gourdcgybwgoB558
CsGy6G001230Carg00252Silver-seed gourdcarcgybB0673
CsGy6G001230Carg02091Silver-seed gourdcarcgybB0284
CsGy6G001230Carg06017Silver-seed gourdcarcgybB0023
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsGy6G001230CsGy5G007200Cucumber (Gy14) v2cgybcgybB143
The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G001230Watermelon (97103) v2cgybwmbB397
CsGy6G001230Cucumber (Gy14) v2cgybcgybB108
CsGy6G001230Cucumber (Gy14) v2cgybcgybB130
CsGy6G001230Cucurbita maxima (Rimu)cgybcmaB737
CsGy6G001230Cucurbita maxima (Rimu)cgybcmaB832
CsGy6G001230Cucurbita maxima (Rimu)cgybcmaB836
CsGy6G001230Cucurbita maxima (Rimu)cgybcmaB840
CsGy6G001230Cucurbita maxima (Rimu)cgybcmaB842
CsGy6G001230Cucurbita maxima (Rimu)cgybcmaB859
CsGy6G001230Cucurbita maxima (Rimu)cgybcmaB860
CsGy6G001230Cucurbita moschata (Rifu)cgybcmoB718
CsGy6G001230Cucurbita moschata (Rifu)cgybcmoB812
CsGy6G001230Cucurbita moschata (Rifu)cgybcmoB820
CsGy6G001230Cucurbita moschata (Rifu)cgybcmoB823
CsGy6G001230Cucurbita moschata (Rifu)cgybcmoB841
CsGy6G001230Cucurbita moschata (Rifu)cgybcmoB842
CsGy6G001230Cucurbita pepo (Zucchini)cgybcpeB803
CsGy6G001230Cucurbita pepo (Zucchini)cgybcpeB806
CsGy6G001230Cucurbita pepo (Zucchini)cgybcpeB812
CsGy6G001230Cucurbita pepo (Zucchini)cgybcpeB835
CsGy6G001230Cucumber (Chinese Long) v2cgybcuB264
CsGy6G001230Bottle gourd (USVL1VR-Ls)cgyblsiB408
CsGy6G001230Bottle gourd (USVL1VR-Ls)cgyblsiB418
CsGy6G001230Melon (DHL92) v3.5.1cgybmeB422
CsGy6G001230Melon (DHL92) v3.6.1cgybmedB418
CsGy6G001230Watermelon (Charleston Gray)cgybwcgB391
CsGy6G001230Watermelon (Charleston Gray)cgybwcgB429
CsGy6G001230Watermelon (Charleston Gray)cgybwcgB449
CsGy6G001230Watermelon (97103) v1cgybwmB421
CsGy6G001230Watermelon (97103) v1cgybwmB476
CsGy6G001230Wild cucumber (PI 183967)cgybcpiB271
CsGy6G001230Wild cucumber (PI 183967)cgybcpiB283
CsGy6G001230Silver-seed gourdcarcgybB0175
CsGy6G001230Silver-seed gourdcarcgybB0586
CsGy6G001230Cucumber (Chinese Long) v3cgybcucB275