CsGy5G027480 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G027480
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionRNA exonuclease 4
LocationChr5 : 31370868 .. 31374166 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAATTCGGTTTGACTTGATTTAAAGTGTGTAGCATATAATATGGATCATCCATGTGAAACTTTAAGGTGTGGTCTCTCTCTATTTGTGAGATATGTTTTTTGAAATATTAGTAATGAGTAACAAAGTTTTGTTGACATTATGAACTCATTGGAATTGGGCAGGCACAAATGTGAAGGTTGCTTCAAGCAATTCAACAAAATAGAGCACTTAGTAGAGCATATGAGAATCTCATTTCACTCAATTCATGAACCAATTTGCTCCTTTTGCCACAAACACTTCAGATACTTTGAATCTCTTAGAGAACATCTTATTGGTAATACCTCAAACTTTCATGTTTCAAATTCATGAATTTTCAAGTTTTTCTTATTAATTTTATTTTTGTTTTAAATGAAAAAATAGAAAGGTGTGTGGTAAGCAATTGATCTTTGTTTCTTATTCTCTATAATTTTTTTAAATCAATGTGAAAAAAAAATGTATAGATTATATATATATATATATATATATATATATTTGATATCCATTGATTTATATTATATTTGTTACATCCTTTTTAACAGGGAGAATGTTTCCATTTTGGTTATGGTTTTATGTAATATACAAACTTAATTATATTATTTAATATGACAACATTTAATTTATATAGTCTTTTTTGCTAAATTGAGCACATAAGTCGATTAACATATAAATGTGTTTATAACTATGTGTTATTGAAAAAAAATATTCTATTTCCTAATGTTTTCGGTTCTGCGTATAAATTTCATATTTTCAGGGCCATTGCCAAAGCAAGAATGCAAAAACATATTCAATGCAAGAGGATGCAAAATCTGCTTAGCCATGTTTGAGAGTCCACTCCAGCTCAACCTTCACCAAGAAAGTTGCCAACTTAGGCCTATAAATTTTGTAAGGGTTCGTCGTGTTTTACGCATTTTTTATATCTCCATGTCTTTTACTCGATTTATGTATTTGAAAGTATATGAACTAAATGTGTTTCCAATTAAAGTTTAATGATCAAATTATAACTTTTATGAAAGTTTAAGAATTGTCGGTATTTTTTTAACATGAAAAACTAACTTTTTAGAAAAATCTAAAAATAGGTTGCAACAAGTAACAAATTATTATCAAATAATTGATTGAGATGCATGAAAAATTTATATTAATCAAAGTAAGCATTATATCTGATACTTGTTATATCAATTTTAAATTTAGACGTTCACAATTTTCTAAACTATATGTATGAAAAGGAGAAATAAAACTTCACATTAATGTTAAAAGAATTTTACCCCTATTAAAAGAAAAAGAGTTTATTATACTCTCATGGTGCTAGAAATCTTATTTCGACTGATTGCAGAGTCATGAAAATAGGGCACGTTTGGGGAAGACAGAAAGTGGTGGAACAAAAGGCAATAACGAAGCAGTGGCATTGAGTTGCACCATGGTGGGCGCTGGCATCGACGGCTCCCTAAATATTTGCGTTAGGGTTTGTGTTGTTGACCAAAACGAGTCCCTCATCTTTTCTACTTATGTCAACCCAACCCTTCCCATCACAAACTATAGGTATATATTCAATTTCTCCTTCTTCTTTTTTACAGTAATAACTATTGTTGTAATTTCTTCTGCTTTTTTGTTTTTGTTTTTTTTCCATTTTAATAAAGAAACACAGTAATAAGATTATATTTAGACCCCGTCTGATAAATTTTTAGTTTTTGAAAATCCAAAGTCCTTCAAGAATTGTTTTTGCATCTTGAAGACTACTATCTATTTATCACGAATAGTTAGAGAGTGTGATATTTTATTATATTTGTAAATAATTTGAAAAGATTTGTGATTTAAAACAAAATTAGGTTTTGATATTAATTAGATTGTGTGGGTGTAGGTATGAATTCACAGGTGTTCGTCCAGAACACTTGAGAGATGCAATGCCATTGAAGCAAGTCCAGAAGAAAATTCAAGAGTTTCTATGCAATGGAGAACAAATGTGGAAGATTCGTCCTGGATCTACTGGAAGAGCAAGAATTCTTGTGGGTCATGGCCTTCAAGAATACCTTACATCTTTGCAAATTGACTACCCTCCCATTATGATCAGGTAAAATGTTTTATCCTTATTAAATATTTGACTGCATCTCAAGCTACATGCATATCCATTTTTAGGCCGTTTCTTAACAAGGAAAATATTTTTTAACATATTTTCTCTACATTCTTAACAAGGAAAATAAAAGTCGAATTTCTAATGAATAGTAATTTATTTAAACTGCAGGGATACTGCTAAATATCCACCATTGATGAAGACAAGCAAGCTAAGCAATTCTCTCCACTGTTTGACACAAACATATCTTGGGTAAAGTTTTCCACATGCATAACCCCTGCCTCCCCCAATAATATTGTTATTTTTTTCTTCCTTCACTAGCTAGATACCTCAAAAGTAGTAGTAAAAATATATATATTTGGTAACAATTTTGTTTTAGATATGAAAAATAGATATCAATCCATAAAAAAAATATATGTTAAGATGAAAGTAGGGTTTACAAGAGTAAGTTTTTAAAATGAAAAAATAAATAGGACAGCTTAGATGATTTATTGTTAAATCAATTTAATTAAAGCTTAAGCTGGTGGTCAACTGGGATAAGCACTTTAACAGTCCTCTCACTTTTTCTTTTTTTTTTATTTCATGGTCATGATACAGAGCAGAAAATCAAATTGCTAATCTTCCACGATGGTAGATTTAGATAGAAAATTATATTAAATAAAAATTTAATTTTTAATATATCATGTCAAATCATCAATCAACTCGAATAATTAAATTAGTTAATGGATTTTGAGTAATTTAATTATATATACAATACTCTAACATTTATAAACAAATTAAAGGTAACTAAACAAAATATTTTAGAATGTTAATCAATAAATGTATTAGAATAGATTTGTTGGAATGAATTAAAAAATTTAATAAGTTTATAAACTTTAAACATTTTACGTCTAATTATATGGTATTGTATATTTTTTGGAATTTTGTTATTCAGATACAGTATGGAAAATGGGAAGAGATTAGAAGGTTATGAGGAGTGTGTTGCAACAATGAGATTGTACATGAGAATGAAATCTCAAGTTCACAAAAGAGAGGAATATCCATTGGCTTCTGATCCACAAAATAAGTTTAATTTTGCAAATTGGAAGCAACTTGAGCTTGAGAAGATGACACCCCAACAGTTGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGTTTGGATTCCACCCTTTAATAATTCCATTCATTACAAACCTTAATCAAACATTA

mRNA sequence

AGTAATTCGGTTTGACTTGATTTAAAGTGTGTAGCATATAATATGGATCATCCATGTGAAACTTTAAGGCACAAATGTGAAGGTTGCTTCAAGCAATTCAACAAAATAGAGCACTTAGTAGAGCATATGAGAATCTCATTTCACTCAATTCATGAACCAATTTGCTCCTTTTGCCACAAACACTTCAGATACTTTGAATCTCTTAGAGAACATCTTATTGGGCCATTGCCAAAGCAAGAATGCAAAAACATATTCAATGCAAGAGGATGCAAAATCTGCTTAGCCATGTTTGAGAGTCCACTCCAGCTCAACCTTCACCAAGAAAGTTGCCAACTTAGGCCTATAAATTTTAGTCATGAAAATAGGGCACGTTTGGGGAAGACAGAAAGTGGTGGAACAAAAGGCAATAACGAAGCAGTGGCATTGAGTTGCACCATGGTGGGCGCTGGCATCGACGGCTCCCTAAATATTTGCGTTAGGGTTTGTGTTGTTGACCAAAACGAGTCCCTCATCTTTTCTACTTATGTCAACCCAACCCTTCCCATCACAAACTATAGGTATGAATTCACAGGTGTTCGTCCAGAACACTTGAGAGATGCAATGCCATTGAAGCAAGTCCAGAAGAAAATTCAAGAGTTTCTATGCAATGGAGAACAAATGTGGAAGATTCGTCCTGGATCTACTGGAAGAGCAAGAATTCTTGTGGGTCATGGCCTTCAAGAATACCTTACATCTTTGCAAATTGACTACCCTCCCATTATGATCAGGGATACTGCTAAATATCCACCATTGATGAAGACAAGCAAGCTAAGCAATTCTCTCCACTGTTTGACACAAACATATCTTGGATACAGTATGGAAAATGGGAAGAGATTAGAAGGTTATGAGGAGTGTGTTGCAACAATGAGATTGTACATGAGAATGAAATCTCAAGTTCACAAAAGAGAGGAATATCCATTGGCTTCTGATCCACAAAATAAGTTTAATTTTGCAAATTGGAAGCAACTTGAGCTTGAGAAGATGACACCCCAACAGTTGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGTTTGGATTCCACCCTTTAATAATTCCATTCATTACAAACCTTAATCAAACATTA

Coding sequence (CDS)

ATGGATCATCCATGTGAAACTTTAAGGCACAAATGTGAAGGTTGCTTCAAGCAATTCAACAAAATAGAGCACTTAGTAGAGCATATGAGAATCTCATTTCACTCAATTCATGAACCAATTTGCTCCTTTTGCCACAAACACTTCAGATACTTTGAATCTCTTAGAGAACATCTTATTGGGCCATTGCCAAAGCAAGAATGCAAAAACATATTCAATGCAAGAGGATGCAAAATCTGCTTAGCCATGTTTGAGAGTCCACTCCAGCTCAACCTTCACCAAGAAAGTTGCCAACTTAGGCCTATAAATTTTAGTCATGAAAATAGGGCACGTTTGGGGAAGACAGAAAGTGGTGGAACAAAAGGCAATAACGAAGCAGTGGCATTGAGTTGCACCATGGTGGGCGCTGGCATCGACGGCTCCCTAAATATTTGCGTTAGGGTTTGTGTTGTTGACCAAAACGAGTCCCTCATCTTTTCTACTTATGTCAACCCAACCCTTCCCATCACAAACTATAGGTATGAATTCACAGGTGTTCGTCCAGAACACTTGAGAGATGCAATGCCATTGAAGCAAGTCCAGAAGAAAATTCAAGAGTTTCTATGCAATGGAGAACAAATGTGGAAGATTCGTCCTGGATCTACTGGAAGAGCAAGAATTCTTGTGGGTCATGGCCTTCAAGAATACCTTACATCTTTGCAAATTGACTACCCTCCCATTATGATCAGGGATACTGCTAAATATCCACCATTGATGAAGACAAGCAAGCTAAGCAATTCTCTCCACTGTTTGACACAAACATATCTTGGATACAGTATGGAAAATGGGAAGAGATTAGAAGGTTATGAGGAGTGTGTTGCAACAATGAGATTGTACATGAGAATGAAATCTCAAGTTCACAAAAGAGAGGAATATCCATTGGCTTCTGATCCACAAAATAAGTTTAATTTTGCAAATTGGAAGCAACTTGAGCTTGAGAAGATGACACCCCAACAGTTGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGTTTGGATTCCACCCTTTAA

Protein sequence

MDHPCETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGTKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
Homology
[Close]
BLAST of CsGy5G027480 vs. NCBI nr
Match: XP_011656271.1 (PREDICTED: RNA exonuclease 4-like [Cucumis sativus])

HSP 1 Score: 716.1 bits (1847), Expect = 5.9e-203
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 

Query: 9   RHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQECK 68
           RHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQECK
Sbjct: 8   RHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQECK 67

Query: 69  NIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGTKGNNEAVAL 128
           NIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGTKGNNEAVAL
Sbjct: 68  NIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGTKGNNEAVAL 127

Query: 129 SCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMP 188
           SCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMP
Sbjct: 128 SCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRDAMP 187

Query: 189 LKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYP 248
           LKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYP
Sbjct: 188 LKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDTAKYP 247

Query: 249 PLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLAS 308
           PLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLAS
Sbjct: 248 PLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEYPLAS 307

Query: 309 DPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL 350
           DPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL
Sbjct: 308 DPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL 348

[Close]
BLAST of CsGy5G027480 vs. NCBI nr
Match: XP_008458921.1 (PREDICTED: RNA exonuclease 4 [Cucumis melo])

HSP 1 Score: 559.7 bits (1441), Expect = 7.1e-156
Identity = 270/356 (75.84%), Postives = 298/356 (83.71%), Query Frame = 0 

Query: 1   MDHPCETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIG 60
           MDH  ET RHKC  CF+QFNKIEHLV+HMR SFHS HEP C+ C KH R  +SLREHLIG
Sbjct: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENR-----ARLGKT- 120
           PLPKQEC+NIF  RGCK CLA+ +S     LHQE CQ  P+N     R      R G T 
Sbjct: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120

Query: 121 -ESGGTKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRY 180
            +SG T+G+  A+AL+C  VG G DGSL+IC +VC+VD+ E++IF +YV P +P+TNYRY
Sbjct: 121 IDSGRTRGSG-AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRY 180

Query: 181 EFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQ 240
           EFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGST +ARILVGHGLQEYLTSLQ
Sbjct: 181 EFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTRKARILVGHGLQEYLTSLQ 240

Query: 241 IDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMR 300
           IDYP IMIRDTAKYPPLMKTSKLSNSLH LTQTYLGY+MENGK+ EGYEECVATMRLY++
Sbjct: 241 IDYPSIMIRDTAKYPPLMKTSKLSNSLHYLTQTYLGYNMENGKKSEGYEECVATMRLYLK 300

Query: 301 MKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL 350
           MKSQVHKREEYPLASDP NKFNFA WKQLELEKMTPQQLLQISRSDYYCWCLD+TL
Sbjct: 301 MKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL 355

[Close]
BLAST of CsGy5G027480 vs. NCBI nr
Match: XP_022990586.1 (RNA exonuclease 4-like [Cucurbita maxima])

HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149
Identity = 260/356 (73.03%), Postives = 292/356 (82.02%), Query Frame = 0 

Query: 1   MDHPCETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIG 60
           MDHP ETLRHKC  CF+QFNKIEHLVEHMR+SFHS+HEP CS CHKH R FESLREHLIG
Sbjct: 1   MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60

Query: 61  PLPKQECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSH-----ENRARLGK-T 120
           PLPKQEC NIF  RGCKICLA+FESP  L LHQE CQLR  NFS       N     K T
Sbjct: 61  PLPKQECNNIFGTRGCKICLAIFESPHTLRLHQERCQLRSPNFSQIMARFRNMGICDKLT 120

Query: 121 ESGGTKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYE 180
              G    +EAVAL+C MVG G DGSL+IC RVC++D+ E++IFSTYVNPTLPITNYR E
Sbjct: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDEKETIIFSTYVNPTLPITNYRLE 180

Query: 181 FTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQ 240
            TGV PE+LRD AMPLKQVQKKIQ+ LCNGE MWKIRPG  G+ARILVGHGL ++L +LQ
Sbjct: 181 STGVGPEYLRDHAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKTLQ 240

Query: 241 IDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMR 300
           I+YPP MIRDTA YPPLMKTSKL+NSLH LTQ YLGY ++NG + + YE+CVATMRLYMR
Sbjct: 241 IEYPPFMIRDTANYPPLMKTSKLTNSLHYLTQAYLGYDIQNGNK-DPYEDCVATMRLYMR 300

Query: 301 MKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL 350
           M++QVHK EEYPLASDPQNK NFA WKQ ELE+M+P+Q+L+ISRSDYYCWCLDS L
Sbjct: 301 MRAQVHKIEEYPLASDPQNKNNFAIWKQFELERMSPEQMLEISRSDYYCWCLDSKL 355

[Close]
BLAST of CsGy5G027480 vs. NCBI nr
Match: XP_022961916.1 (RNA exonuclease 4-like [Cucurbita moschata])

HSP 1 Score: 534.6 bits (1376), Expect = 2.4e-148
Identity = 258/356 (72.47%), Postives = 291/356 (81.74%), Query Frame = 0 

Query: 1   MDHPCETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIG 60
           MDHP ETLRHKC  CF+QFNKIEHLVEHMR+SFHS+HEP CS CHKH R FESLREHLIG
Sbjct: 1   MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60

Query: 61  PLPKQECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSH-----ENRARLGK-T 120
           P PKQEC N+F  RGCKICLA+FESP  L LHQE CQLR  N S       N     K T
Sbjct: 61  PRPKQECNNVFVIRGCKICLAIFESPHTLRLHQERCQLRSPNSSQITTRFRNMGICDKLT 120

Query: 121 ESGGTKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYE 180
              G    +EAVAL+C MVG G DGSL+IC RVC++D+NE++IFSTYVNPTLPITNYR E
Sbjct: 121 SDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRLE 180

Query: 181 FTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQ 240
            TGV PE++RD AMPLKQVQKKIQ+ LCNGE MWKIRPG  G+ARILVGHGL ++L SLQ
Sbjct: 181 STGVGPEYMRDRAMPLKQVQKKIQDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSLQ 240

Query: 241 IDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMR 300
           I+YPP MIRDTA YPPLMKTSKL+NSLH LTQ YLGY ++NG + + YE+CVATMRLYMR
Sbjct: 241 IEYPPFMIRDTANYPPLMKTSKLTNSLHYLTQAYLGYDIQNGSK-DPYEDCVATMRLYMR 300

Query: 301 MKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL 350
           M+SQVHK EEYPLASDPQNK NFA WKQ ELE+M+P+Q+L++SRSDYYCWCLDS L
Sbjct: 301 MRSQVHKIEEYPLASDPQNKNNFAIWKQFELERMSPEQMLEVSRSDYYCWCLDSKL 355

[Close]
BLAST of CsGy5G027480 vs. NCBI nr
Match: XP_023543310.1 (RNA exonuclease 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.6 bits (1368), Expect = 2.1e-147
Identity = 257/357 (71.99%), Postives = 291/357 (81.51%), Query Frame = 0 

Query: 1   MDHPCETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIG 60
           MDHP ETLRHKC  CF+QFNKIEHLVEHMR+SFHS+HEP CS CHKH R FESLREHLIG
Sbjct: 1   MDHPSETLRHKCAACFRQFNKIEHLVEHMRLSFHSLHEPTCSLCHKHCRSFESLREHLIG 60

Query: 61  PLPKQECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENRARLGK------- 120
           PLPKQEC NIF  RGCKICLA+FESP  L LHQE CQLR  N S +  AR          
Sbjct: 61  PLPKQECNNIFGTRGCKICLAIFESPHTLRLHQERCQLRSPN-SSQTMARFRNMGIYDKL 120

Query: 121 TESGGTKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRY 180
           T   G    +EAVAL+C MVG G DGSL+IC RVC++D+NE++IFSTYVNPTLPITNYR 
Sbjct: 121 TSDNGRMRRHEAVALACRMVGGGSDGSLDICARVCLIDENETIIFSTYVNPTLPITNYRL 180

Query: 181 EFTGVRPEHLRD-AMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSL 240
           E TGV PE++RD AMPLKQV KKI++ LCNGE MWKIRPG  G+ARILVGHGL ++L SL
Sbjct: 181 ESTGVGPEYMRDHAMPLKQVGKKIEDILCNGEPMWKIRPGVGGKARILVGHGLGDHLKSL 240

Query: 241 QIDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYM 300
           QI+YPP MIRDTA YPPLMKTSKL+NSLH LTQ YLGY ++N  + + YE+CVATMRLYM
Sbjct: 241 QIEYPPFMIRDTAYYPPLMKTSKLTNSLHYLTQAYLGYDIQNENK-DPYEDCVATMRLYM 300

Query: 301 RMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL 350
           RM+SQVHK EEYPLASDPQNK NFA WKQ ELE+M+P+Q+L++SRSDYYCWCLDS L
Sbjct: 301 RMRSQVHKIEEYPLASDPQNKNNFAIWKQFELERMSPEQMLEVSRSDYYCWCLDSKL 355

[Close]
BLAST of CsGy5G027480 vs. TAIR10
Match: AT5G40310.1 (Exonuclease family protein)

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-127
Identity = 218/347 (62.82%), Postives = 265/347 (76.37%), Query Frame = 0 

Query: 6   ETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQ 65
           +T R+KC GC++QFNK EHLVEHMRIS+HS+HEP C  C+KH R F+SLREHLIGPLPKQ
Sbjct: 2   DTCRNKCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQ 61

Query: 66  ECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENR-ARLG----KTESGGTK 125
           ECKNIF+ RGC+ CL + ESP    +HQE CQL  +      R A LG     T    + 
Sbjct: 62  ECKNIFSIRGCRFCLTILESPNARRIHQERCQLSNVTSGLMIRMAALGLRNNSTIDYTSS 121

Query: 126 GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRP 185
            +   VALSC MVG G DGSL++C RVC+ D++E+++F TYV PT+P+TNYRYE TG+RP
Sbjct: 122 RSPRVVALSCKMVGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRP 181

Query: 186 EHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIM 245
           E+LRDAM LK  Q+K+QEFLCNGE MWKIRP   G+ARILVGHGL  +L SLQ++Y   M
Sbjct: 182 ENLRDAMRLKHAQRKVQEFLCNGEPMWKIRP-RNGKARILVGHGLDNHLDSLQLEYSSSM 241

Query: 246 IRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHK 305
           IRDTA+YPPLMK+SKLSNSL  LTQ YLGY +  G + + YE+CVATMRLY RM+ Q H+
Sbjct: 242 IRDTAEYPPLMKSSKLSNSLKYLTQAYLGYDIHVGIQ-DPYEDCVATMRLYTRMRYQKHR 301

Query: 306 REEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS 348
            E YPLASD QN  NFA W+Q ELE+M+P++LL +SRSDYYCWCLDS
Sbjct: 302 AEAYPLASDTQNHNNFAAWRQNELERMSPEELLDLSRSDYYCWCLDS 346

[Close]
BLAST of CsGy5G027480 vs. TAIR10
Match: AT3G27970.1 (Exonuclease family protein)

HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-126
Identity = 217/347 (62.54%), Postives = 262/347 (75.50%), Query Frame = 0 

Query: 6   ETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQ 65
           ETLR+KC  C++QFNK+EHLVEHM+IS+HS HEP C  C KH R FESLREHLIGPLPKQ
Sbjct: 11  ETLRNKCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLPKQ 70

Query: 66  ECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENR-ARLGKTESG----GTK 125
           ECKNIF+ RGC+ C+ + ESP    +HQE CQ   +N     R A LG  +       + 
Sbjct: 71  ECKNIFSLRGCRFCMTILESPNSRRIHQERCQFSSVNSGLTTRMAALGLRDKAMIDYTSS 130

Query: 126 GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRP 185
            +   VALSC MVG G DGSL++C RVC+ D+++++IF TYV P++ +T+YRYE TG+RP
Sbjct: 131 RSPRVVALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRP 190

Query: 186 EHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIM 245
           E+LRDAMPLKQVQ+KIQEFLCNGE MWKIRP   G+ARILVGHGL   L  LQ++YP  M
Sbjct: 191 ENLRDAMPLKQVQRKIQEFLCNGEPMWKIRPRG-GKARILVGHGLDHDLDRLQLEYPSSM 250

Query: 246 IRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHK 305
           IRDTAKYPPLMKTSKLSNSL  LTQ YLGY +  G + + YE+CVATMRLY RM+ Q HK
Sbjct: 251 IRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQ-DPYEDCVATMRLYTRMRYQKHK 310

Query: 306 REEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS 348
            E YPLA+D QN+ N   W+Q E E+M+P ++L ISRSDYYCWCLDS
Sbjct: 311 IEAYPLAADAQNRSNQVAWRQSEAERMSPDEMLSISRSDYYCWCLDS 355

[Close]
BLAST of CsGy5G027480 vs. TAIR10
Match: AT2G48100.1 (Exonuclease family protein)

HSP 1 Score: 302.0 bits (772), Expect = 4.8e-82
Identity = 155/342 (45.32%), Postives = 218/342 (63.74%), Query Frame = 0 

Query: 7   TLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGP--LPK 66
           ++RH+C  C+K FN+ EHLVEHM+IS+HS+H+P C  C KH + FES+REHL  P  L K
Sbjct: 14  SVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSK 73

Query: 67  QECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENRARLGKTESGGTKGNNE 126
             CK IF  RGC +CL +FE    L  H+  C L P      +  R   +   G++   +
Sbjct: 74  GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRNPSSSLAGSR--LK 133

Query: 127 AVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLR 186
           A+AL C MVG G DG+++ C  VC+VD +E++IFST+V P LP+T+YR+E TG+  E L+
Sbjct: 134 AMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLK 193

Query: 187 DAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDT 246
           D MPL+ V++++  FLC G+          GR  +LVGH L+  ++ L+++YP  ++RDT
Sbjct: 194 DGMPLEHVRERVFSFLCGGQN------DGAGRL-LLVGHDLRHDMSCLKLEYPSHLLRDT 253

Query: 247 AKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKREEY 306
           AKY PLMKT+ +S SL  LT++YLGY ++ GK  E YE+CV+ MRLY RM+ Q H     
Sbjct: 254 AKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKH-EVYEDCVSAMRLYKRMRDQEH----- 313

Query: 307 PLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLD 347
            + S         + KQ +LEKM  ++L Q S S+Y CWCLD
Sbjct: 314 -VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLD 339

[Close]
BLAST of CsGy5G027480 vs. TAIR10
Match: AT3G15080.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 5.1e-15
Identity = 51/177 (28.81%), Postives = 86/177 (48.59%), Query Frame = 0 

Query: 124 EAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHL 183
           + VA+ C MVG    G+ +   RV +V++  ++++  +V P   + ++R   +G+RP  L
Sbjct: 82  DEVAMDCEMVGVS-QGTKSALGRVTLVNKWGNVLYDEFVRPVEHVVDFRTSISGIRPRDL 141

Query: 184 RDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRD 243
           R A   +  Q K+ E +               + +ILVGH L   L +L + +P   IRD
Sbjct: 142 RKAKDFRVAQTKVAELI---------------KGKILVGHALHNDLKALLLTHPKKDIRD 201

Query: 244 TAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHK 301
           T +Y P +K  K   SL  L    LG  ++NG+     ++  A M LY + + +  K
Sbjct: 202 TGEYQPFLK-GKTRKSLKHLASEILGADIQNGEHCP-IDDARAAMMLYQKNRKEWEK 240

[Close]
BLAST of CsGy5G027480 vs. TAIR10
Match: AT3G50100.1 (small RNA degrading nuclease 1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-11
Identity = 56/170 (32.94%), Postives = 87/170 (51.18%), Query Frame = 0 

Query: 126 VALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPEHLRD 185
           VA+ C MV    DG+  + VRV VVD++  +I   +V P  P+ +YR + TG+  E + +
Sbjct: 141 VAVDCEMVLCE-DGTEGL-VRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDIEN 200

Query: 186 A-MPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMIRDT 245
           A + +  +Q+ +Q FL  G               ILVGH L   L  L+ID+P ++  DT
Sbjct: 201 ASLSVVDIQETLQPFLSTG--------------TILVGHSLNRDLEVLKIDHPKVI--DT 260

Query: 246 A---KYPPLMKTSKLSNSLHCLTQTYLGYSM-ENGKRLEGYEECVATMRL 291
           A   KYP   K  +   SL+ L ++ LGY + + G   +   +  A M+L
Sbjct: 261 ALVFKYPNTRKLRR--PSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKL 290

[Close]
BLAST of CsGy5G027480 vs. Swiss-Prot
Match: sp|Q9GZR2|REXO4_HUMAN (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 107.8 bits (268), Expect = 2.4e-22
Identity = 67/195 (34.36%), Postives = 99/195 (50.77%), Query Frame = 0 

Query: 121 GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRP 180
           G   A+AL C MVG G  G  ++  RV +V+Q    ++  YV PT P+T+YR   +G+RP
Sbjct: 239 GLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRP 298

Query: 181 EHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIM 240
           E+L+    L+ VQK++ E L               + RILVGH L   L  L +D+P   
Sbjct: 299 ENLKQGEELEVVQKEVAEML---------------KGRILVGHALHNDLKVLFLDHPKKK 358

Query: 241 IRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVH 300
           IRDT KY P     K    SL  L++  LG  ++  +     ++  A MRLY+ +K +  
Sbjct: 359 IRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHC-SIQDAQAAMRLYVMVKKEWE 417

Query: 301 K--REEYPLASDPQN 313
              R+  PL + P +
Sbjct: 419 SMARDRRPLLTAPDH 417

[Close]
BLAST of CsGy5G027480 vs. Swiss-Prot
Match: sp|Q6PAQ4|REXO4_MOUSE (RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 2.9e-20
Identity = 61/178 (34.27%), Postives = 92/178 (51.69%), Query Frame = 0 

Query: 121 GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRP 180
           G  +A+AL C MVG G  G  +I  RV +V+Q    ++  YV PT P+T+YR   +G+RP
Sbjct: 249 GLTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRP 308

Query: 181 EHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIM 240
           E+L+     + V+K++ E L               + RILVGH L   L  L +D+P   
Sbjct: 309 ENLKQGEEFEVVKKEVAEML---------------KGRILVGHALHNDLKVLFLDHPKKK 368

Query: 241 IRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQ 298
           IRDT K+ P     K    SL  L++  LG  ++  +     ++  A MRLY+ +K +
Sbjct: 369 IRDTQKFKPFRSRVKSGRPSLKRLSEKILGIRVQQAEHC-SIQDAQAAMRLYVMVKRE 410

[Close]
BLAST of CsGy5G027480 vs. Swiss-Prot
Match: sp|Q91560|REXO4_XENLA (RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 8.5e-20
Identity = 61/177 (34.46%), Postives = 87/177 (49.15%), Query Frame = 0 

Query: 120 KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVR 179
           +G    VA+ C MVG G+DG  +I  RV +V+     ++  YV PT  +T+YR   +G+R
Sbjct: 229 EGLTRTVAMDCEMVGVGMDGEESILARVSIVNLFGKCVYDKYVKPTERVTDYRTAVSGIR 288

Query: 180 PEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPI 239
           PE ++   P K VQK++ E L               R R LVGH +   L  L +D+P  
Sbjct: 289 PEDVKKGEPFKVVQKEVSEIL---------------RGRTLVGHAVHNDLKILFLDHPKK 348

Query: 240 MIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMK 296
            IRDT KY P  +  K    SL  L +  L   ++ G+     ++  A MRLY   K
Sbjct: 349 AIRDTQKYKPFKQKVKSGRPSLKLLCEKILNVKVQTGEHC-SVQDAQAAMRLYTMEK 389

[Close]
BLAST of CsGy5G027480 vs. Swiss-Prot
Match: sp|Q6DEW6|REXO4_XENTR (RNA exonuclease 4 OS=Xenopus tropicalis OX=8364 GN=rexo4 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.7e-18
Identity = 57/177 (32.20%), Postives = 86/177 (48.59%), Query Frame = 0 

Query: 120 KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVR 179
           +G    VA+ C MVG G+DG  ++  RV +V+     ++  YV PT  +T+YR   +G+R
Sbjct: 223 EGLTRTVAMDCEMVGVGLDGEESMLARVSIVNLFGKCVYDKYVRPTERVTDYRTAVSGIR 282

Query: 180 PEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPI 239
           P+ +++    K VQ ++ E L               R R LVGH +   L  L +D+P  
Sbjct: 283 PDDIKNGEAFKDVQAEVAEIL---------------RGRTLVGHAVHNDLKILFLDHPKK 342

Query: 240 MIRDTAKYPPLMKTSKLSN-SLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMK 296
            IRDT KY P  +  K    SL  L +  L   ++ G+     ++  A MRLY   K
Sbjct: 343 AIRDTQKYKPFKEKVKSGRPSLKLLCEKILNVKVQTGEHC-SVQDAQAAMRLYTMEK 383

[Close]
BLAST of CsGy5G027480 vs. Swiss-Prot
Match: sp|Q4WHF8|REXO4_ASPFU (RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rex4 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.8e-17
Identity = 65/194 (33.51%), Postives = 97/194 (50.00%), Query Frame = 0 

Query: 113 KTESGGTKGN---------NEAVALSCTMVGAGID-GSLNICVRVCVVDQNESLIFSTYV 172
           +TES  TK N          + VA+ C MVG G +  + +   RV +V+ N   ++ +YV
Sbjct: 95  RTESKPTKVNEGRSPTAEIGKYVAMDCEMVGVGPNPDNDSALARVSIVNFNGEQVYDSYV 154

Query: 173 NPTLPITNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVG 232
            P   IT++R   +G+ P+H+ +A  L+QVQK + E L                 RILVG
Sbjct: 155 RPKEMITDWRTHVSGISPKHMAEARSLEQVQKDVAEIL---------------DGRILVG 214

Query: 233 HGLQEYLTSLQIDYPPIMIRDTAKYPPLMK-TSKLSNSLHCLTQTYLGYSMENGKRLEGY 292
           H +   L +L + +P   IRDT+K+PP  K     S  L  L   +LG ++++G      
Sbjct: 215 HAVSNDLDALLLGHPKRDIRDTSKHPPYRKIAGGGSPRLKILASEFLGLNIQDGAH-SSV 272

Query: 293 EECVATMRLYMRMK 296
           E+  ATM LY R K
Sbjct: 275 EDAKATMLLYRRDK 272

[Close]
BLAST of CsGy5G027480 vs. TrEMBL
Match: tr|A0A1S3C947|A0A1S3C947_CUCME (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 4.7e-156
Identity = 270/356 (75.84%), Postives = 298/356 (83.71%), Query Frame = 0 

Query: 1   MDHPCETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIG 60
           MDH  ET RHKC  CF+QFNKIEHLV+HMR SFHS HEP C+ C KH R  +SLREHLIG
Sbjct: 1   MDHSLETSRHKCAACFRQFNKIEHLVDHMRTSFHSHHEPTCAICKKHCRSLDSLREHLIG 60

Query: 61  PLPKQECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENR-----ARLGKT- 120
           PLPKQEC+NIF  RGCK CLA+ +S     LHQE CQ  P+N     R      R G T 
Sbjct: 61  PLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTI 120

Query: 121 -ESGGTKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRY 180
            +SG T+G+  A+AL+C  VG G DGSL+IC +VC+VD+ E++IF +YV P +P+TNYRY
Sbjct: 121 IDSGRTRGSG-AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRY 180

Query: 181 EFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQ 240
           EFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGST +ARILVGHGLQEYLTSLQ
Sbjct: 181 EFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTRKARILVGHGLQEYLTSLQ 240

Query: 241 IDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMR 300
           IDYP IMIRDTAKYPPLMKTSKLSNSLH LTQTYLGY+MENGK+ EGYEECVATMRLY++
Sbjct: 241 IDYPSIMIRDTAKYPPLMKTSKLSNSLHYLTQTYLGYNMENGKKSEGYEECVATMRLYLK 300

Query: 301 MKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDSTL 350
           MKSQVHKREEYPLASDP NKFNFA WKQLELEKMTPQQLLQISRSDYYCWCLD+TL
Sbjct: 301 MKSQVHKREEYPLASDPPNKFNFAIWKQLELEKMTPQQLLQISRSDYYCWCLDATL 355

[Close]
BLAST of CsGy5G027480 vs. TrEMBL
Match: tr|A0A251Q6W2|A0A251Q6W2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G285000 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 2.7e-135
Identity = 233/346 (67.34%), Postives = 280/346 (80.92%), Query Frame = 0 

Query: 6   ETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQ 65
           ETLR+KC  C++QFNKIEHLVEHMR S+HS HEP C  C KH R FESLREHLIGPLPKQ
Sbjct: 9   ETLRNKCAACYRQFNKIEHLVEHMRTSYHSAHEPTCGICKKHCRSFESLREHLIGPLPKQ 68

Query: 66  ECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENR-ARLG---KTESGGTKG 125
           EC+NIF+ RGCK CLA+ +SP  L +HQ+ CQL  +N     R A LG    TE+G T+G
Sbjct: 69  ECRNIFSTRGCKFCLAILDSPYALRVHQDRCQLSGVNAGLLGRFANLGIRDNTENGSTRG 128

Query: 126 NNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRPE 185
             + VAL+C MVG G DGSL++C +VC++D+ E++IF +YV P LP+TNYRYE TG+RPE
Sbjct: 129 -TQVVALACKMVGGGSDGSLDLCAKVCLIDEYENIIFQSYVKPLLPVTNYRYETTGIRPE 188

Query: 186 HLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIMI 245
           +LRDAMPL+QVQKKIQ+FLCNGE MWKIRP   G+ARILVGHGL   L SLQ++YP +MI
Sbjct: 189 YLRDAMPLRQVQKKIQDFLCNGEPMWKIRPRG-GKARILVGHGLDHDLDSLQVEYPQVMI 248

Query: 246 RDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHKR 305
           RDTAKYPPLMKTSKLSNSL  LTQ YLGY ++ G + + YE+CVATM+LYMRM+SQVHK 
Sbjct: 249 RDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQ-DPYEDCVATMKLYMRMRSQVHKT 308

Query: 306 EEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS 348
           E YPLASDPQN+ NFA+W+Q ELE+M P+Q+L+ SRSDYYCWCLDS
Sbjct: 309 EAYPLASDPQNRNNFASWRQNELERMNPEQMLEASRSDYYCWCLDS 351

[Close]
BLAST of CsGy5G027480 vs. TrEMBL
Match: tr|W9S0J7|W9S0J7_9ROSA (RNA exonuclease 4 OS=Morus notabilis OX=981085 GN=L484_020501 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 7.8e-135
Identity = 231/355 (65.07%), Postives = 283/355 (79.72%), Query Frame = 0 

Query: 6   ETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQ 65
           ETLR+KC  CF+QFNK+EHLVEHMR S+HS+HEP C  C KH R FESLREHLIGPLPKQ
Sbjct: 10  ETLRNKCAACFRQFNKLEHLVEHMRTSYHSVHEPACGICRKHCRSFESLREHLIGPLPKQ 69

Query: 66  ECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFS-----------HENRAR--LG 125
           EC+NIF+ RGC+ CLA+F+SP  L +HQ+ CQL  +N S            +N A    G
Sbjct: 70  ECRNIFSTRGCRFCLAIFDSPYALRIHQDRCQLSGLNGSGVLGRLSNLGIRDNLAMDYSG 129

Query: 126 KTESGGTKGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYR 185
           ++  GG     + VAL+C MVG G DGSL+IC RVC++D+ E++IF +YV P +P+TNYR
Sbjct: 130 RSTRGG--AGPQVVALACKMVGGGSDGSLDICARVCLIDEFENIIFHSYVKPPIPVTNYR 189

Query: 186 YEFTGVRPEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSL 245
           YE TG+RPE+LRDAMP++QVQKKIQ+FLCNGE MWKIRP S G+ARILVGHGL   L  L
Sbjct: 190 YETTGIRPEYLRDAMPVRQVQKKIQDFLCNGEPMWKIRPRSGGKARILVGHGLDHDLDRL 249

Query: 246 QIDYPPIMIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYM 305
           Q++YP +MIRDTAKYPPLMKTSKLSNSL  LTQ YLGY +++G + + YE+CVATMRLYM
Sbjct: 250 QLEYPSVMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQSGIQ-DPYEDCVATMRLYM 309

Query: 306 RMKSQVHKREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS 348
           RM+SQ H+ E+YPLASDPQN+ NFA+W+Q ELE+MTP+Q+L+ISRSDYYCWCLDS
Sbjct: 310 RMRSQNHRVEDYPLASDPQNRNNFASWRQTELERMTPEQMLEISRSDYYCWCLDS 361

[Close]
BLAST of CsGy5G027480 vs. TrEMBL
Match: tr|A0A2P4MYE6|A0A2P4MYE6_QUESU (Rna exonuclease 4 OS=Quercus suber OX=58331 GN=CFP56_40558 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.3e-134
Identity = 235/348 (67.53%), Postives = 282/348 (81.03%), Query Frame = 0 

Query: 6   ETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQ 65
           ETLR+KC  CFKQFNK+EHLVEHMR S+HS+HEPIC  C KH R FESLREHLIGPLPKQ
Sbjct: 9   ETLRNKCVACFKQFNKMEHLVEHMRTSYHSVHEPICGICKKHCRSFESLREHLIGPLPKQ 68

Query: 66  ECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENR-ARLG-----KTESGGT 125
           ECKNIFN RGCK CLA+ +SP    +HQE CQ   IN     R A LG       ++G T
Sbjct: 69  ECKNIFNIRGCKFCLAILDSPNARWIHQERCQFSSINSGLLARFANLGIRDNLTVDNGRT 128

Query: 126 KGNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVR 185
           +G  + VAL+C MVG G DGSL++C RVC++D++E++IF TYV P +P+TNYRYE TG+R
Sbjct: 129 RG-PQVVALACKMVGGGSDGSLDLCARVCLIDESENIIFHTYVKPPIPVTNYRYETTGIR 188

Query: 186 PEHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPI 245
           PE+LRDAMPL+QVQ+KIQ+FLCNGE MWKIRP   G+ARILVGHGL   L  LQ++YP I
Sbjct: 189 PEYLRDAMPLRQVQRKIQDFLCNGEPMWKIRP-KGGKARILVGHGLDHDLDRLQVEYPAI 248

Query: 246 MIRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVH 305
           M+RDTAKYPPLMKTSKLSNSL  LTQ YLGY ++ G + + YE+CVAT+RL+MRM+SQVH
Sbjct: 249 MMRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGIQ-DPYEDCVATLRLFMRMRSQVH 308

Query: 306 KREEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS 348
           K E+YPLASDPQN+ NFA+W+Q ELE+M+P+QLL+ISRSDYYCWCLDS
Sbjct: 309 KIEDYPLASDPQNRNNFASWRQNELERMSPEQLLEISRSDYYCWCLDS 353

[Close]
BLAST of CsGy5G027480 vs. TrEMBL
Match: tr|A0A1R3HH88|A0A1R3HH88_9ROSI (Exonuclease OS=Corchorus olitorius OX=93759 GN=COLO4_28968 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 3.8e-134
Identity = 223/347 (64.27%), Postives = 282/347 (81.27%), Query Frame = 0 

Query: 6   ETLRHKCEGCFKQFNKIEHLVEHMRISFHSIHEPICSFCHKHFRYFESLREHLIGPLPKQ 65
           E+LR+KC  CF+QFN++EHLV+HMR+S+HS+HEP C  C KH R FESLREHLIGPLPKQ
Sbjct: 5   ESLRNKCAACFRQFNRMEHLVDHMRVSYHSVHEPTCGVCKKHCRSFESLREHLIGPLPKQ 64

Query: 66  ECKNIFNARGCKICLAMFESPLQLNLHQESCQLRPINFSHENR-ARLGKTES----GGTK 125
           ECK++FN RGC+ CLA+ +SP  L +HQ+ CQL  +N+    R A +G  +S     G  
Sbjct: 65  ECKSVFNIRGCRFCLAILDSPYALRIHQDRCQLSGVNYGILARLANIGLRDSLTIDNGYS 124

Query: 126 GNNEAVALSCTMVGAGIDGSLNICVRVCVVDQNESLIFSTYVNPTLPITNYRYEFTGVRP 185
             ++ VAL+C MVG G DGSL++C RVC++D+NE++IF TYV P +P+TNYRYE TG+RP
Sbjct: 125 RGSQVVALACKMVGGGSDGSLDLCARVCLIDENENIIFHTYVKPQIPVTNYRYESTGIRP 184

Query: 186 EHLRDAMPLKQVQKKIQEFLCNGEQMWKIRPGSTGRARILVGHGLQEYLTSLQIDYPPIM 245
           E+LRDAMPL+QVQK+IQ+FLCNGE MWKIR    GRARILVGHGL   L  LQ++YP IM
Sbjct: 185 EYLRDAMPLRQVQKRIQDFLCNGEAMWKIRSPKGGRARILVGHGLDHDLDRLQVEYPAIM 244

Query: 246 IRDTAKYPPLMKTSKLSNSLHCLTQTYLGYSMENGKRLEGYEECVATMRLYMRMKSQVHK 305
           IRDTAKYPPLMKTSKLSNSL  LTQ YLGY +++G + + YE+CVATMRLY+RM++Q H+
Sbjct: 245 IRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQSGIQ-DPYEDCVATMRLYLRMRNQYHR 304

Query: 306 REEYPLASDPQNKFNFANWKQLELEKMTPQQLLQISRSDYYCWCLDS 348
           RE+YPLA+DPQN+ NFA+W+Q ELE+M+P+++L ISRSDYYCWCLDS
Sbjct: 305 REDYPLAADPQNRNNFASWRQNELERMSPEEMLAISRSDYYCWCLDS 350

The following BLAST results are available for this feature:
BLAST of CsGy5G027480 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656271.15.9e-203100.00PREDICTED: RNA exonuclease 4-like [Cucumis sativus][more]
XP_008458921.17.1e-15675.84PREDICTED: RNA exonuclease 4 [Cucumis melo][more]
XP_022990586.11.7e-14973.03RNA exonuclease 4-like [Cucurbita maxima][more]
XP_022961916.12.4e-14872.47RNA exonuclease 4-like [Cucurbita moschata][more]
XP_023543310.12.1e-14771.99RNA exonuclease 4-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy5G027480 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G40310.11.3e-12762.82Exonuclease family protein[more]
AT3G27970.11.9e-12662.54Exonuclease family protein[more]
AT2G48100.14.8e-8245.32Exonuclease family protein[more]
AT3G15080.15.1e-1528.81Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G50100.11.5e-1132.94small RNA degrading nuclease 1[more]
BLAST of CsGy5G027480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9GZR2|REXO4_HUMAN2.4e-2234.36RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2[more]
sp|Q6PAQ4|REXO4_MOUSE2.9e-2034.27RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2[more]
sp|Q91560|REXO4_XENLA8.5e-2034.46RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2[more]
sp|Q6DEW6|REXO4_XENTR4.7e-1832.20RNA exonuclease 4 OS=Xenopus tropicalis OX=8364 GN=rexo4 PE=2 SV=1[more]
sp|Q4WHF8|REXO4_ASPFU6.8e-1733.51RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 10... [more]
BLAST of CsGy5G027480 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C947|A0A1S3C947_CUCME4.7e-15675.84RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103498183 PE=4 SV=1[more]
tr|A0A251Q6W2|A0A251Q6W2_PRUPE2.7e-13567.34Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G285000 PE=4 SV=1[more]
tr|W9S0J7|W9S0J7_9ROSA7.8e-13565.07RNA exonuclease 4 OS=Morus notabilis OX=981085 GN=L484_020501 PE=4 SV=1[more]
tr|A0A2P4MYE6|A0A2P4MYE6_QUESU1.3e-13467.53Rna exonuclease 4 OS=Quercus suber OX=58331 GN=CFP56_40558 PE=4 SV=1[more]
tr|A0A1R3HH88|A0A1R3HH88_9ROSI3.8e-13464.27Exonuclease OS=Corchorus olitorius OX=93759 GN=COLO4_28968 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR012337RNaseH-like_sf
IPR013087Znf_C2H2_type
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006364 rRNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G027480.1CsGy5G027480.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 124..300
e-value: 2.9E-14
score: 63.4
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 141..246
e-value: 5.7E-7
score: 30.1
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 120..310
e-value: 8.0E-36
score: 125.2
NoneNo IPR availablePANTHERPTHR12801:SF56EXONUCLEASE FAMILY PROTEINcoord: 5..347
NoneNo IPR availablePANTHERPTHR12801EXONUCLEASEcoord: 5..347
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 12..34
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 10..39
score: 11.552
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 127..298
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 10..58

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy5G027480Cp4.1LG13g09020Cucurbita pepo (Zucchini)cgybcpeB598
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy5G027480Cucurbita maxima (Rimu)cgybcmaB609
CsGy5G027480Cucurbita maxima (Rimu)cgybcmaB647
CsGy5G027480Cucurbita moschata (Rifu)cgybcmoB584
CsGy5G027480Cucurbita moschata (Rifu)cgybcmoB625
CsGy5G027480Cucurbita pepo (Zucchini)cgybcpeB625
CsGy5G027480Cucumber (Chinese Long) v2cgybcuB223
CsGy5G027480Bottle gourd (USVL1VR-Ls)cgyblsiB319
CsGy5G027480Melon (DHL92) v3.5.1cgybmeB299
CsGy5G027480Melon (DHL92) v3.6.1cgybmedB299
CsGy5G027480Watermelon (Charleston Gray)cgybwcgB315
CsGy5G027480Watermelon (97103) v1cgybwmB340
CsGy5G027480Wild cucumber (PI 183967)cgybcpiB225
CsGy5G027480Silver-seed gourdcarcgybB0280
CsGy5G027480Silver-seed gourdcarcgybB0686
CsGy5G027480Cucumber (Chinese Long) v3cgybcucB232
CsGy5G027480Watermelon (97103) v2cgybwmbB390
CsGy5G027480Wax gourdcgybwgoB447